ClCG03G014080 (gene) Watermelon (Charleston Gray)

Overview
NameClCG03G014080
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionEarly nodulin 55-2, putative
LocationCG_Chr03 : 28957166 .. 28958712 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCGGGATGGCGGCGGAGGCAGTGACAACCATGGCGGTCGTGGCGGTGGCCGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTGTTGCATAGGGTTGGAGGAGGAAAATATACTTGGACACCTAATATTAACTTCACTGATTGGTCAATTCATGAACACTTTTATGTTGGTGATTGGCTTTGTAAGTTGTTCATTTTCTTTTCTTTTTGATGATTATATGAGATGGAAATTTTGGCAATGGGATTGTGTTATCTAAACAGTACTAGAGAATTTTGGTCAGGTTTTTCATATAAAGTTAGGGTTAAAAGAAGTCAAATTTTAGGGGTAATTTCCCATTTGTAAGGTAAAATATGTTTTCACCTAAGCTAATCATGTCCCTATTTTTCAATTGTATTTAAAATAATCATTAATTTTTAGTTCTTACTCCATTTCTTTTCATTTTGGGGTTTTCACCTTTTCAACTCTTTTTCAAATAACATATATATGATCATTAAAGTCAAAGAAAATCTCACATCTTAATATGAAAAACAAAATTTTAATTTGGCTCATATGTAGACACATATACATGAAGATCAATTATATTATATCATAAATGCGTTGTAGGCAACAAAATTGTTATTATTATTATTTTGAGTCCAAAAAAGGTGTATAATTTGATGAAGATTTGAATCTTTGATTACTTTTAAGAAGGTTTATAATCTTTTGTAGTTATAGACTTTTACGATTTTTCTAACTTTTTCTTCTTCTGGGGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTATTTTGGGTTTGATAAACATATCTACAACGTGTTGGAAGTGAACAAAACGAGCTACGAGGGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACATATTACTTTCTAAGTGGAAGAGGATTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGTTGAAGAGTACTCTCCTCCCATTTCACCACCAAATTTACCCAATACTTCTCCATCTTTACATTCATTAATATGGCCTTTCTCCCTCTTGCTATCCATCAACATTTCCATGGCTAATTCCTTCTTCTAAATTTGGATAATTATATCTTGATTAGGGCTAGAATTAGGGTAGCTTTTATTATATGTAGCTTGGGTTTGAATCCTTTTTTANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGATTTTGGGTTTGATAAACATATCTACAACGTGTTGGAAGTGAACAAAACGAGCTACGAGGGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACATATTACTTTCTAAGTGGAAGAGGATTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGTTGAAGAGTACTCTCCTCCCATTTCACCACCAAATTTACCCAATACTTCTCCATCTTTACATTCATTAATATGGCCTTTCTCCCTCTTGCTATCCATCAACATTTCCATGGCTAATTCCTTCTTCTAA

mRNA sequence

ATGCTCGGGATGGCGGCGGAGGCAGTGACAACCATGGCGGTCGTGGCGGTGGCCGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTGTTGCATAGGGTTGGAGGAGGAAAATATACTTGGACACCTAATATTAACTTCACTGATTGGTCAATTCATGAACACTTTTATGTTGTGAACAAAACGAGCTACGAGGGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACATATTACTTTCTAAATTTTGGGTTTGATAAACATATCTACAACGTGTTGGAAGTGAACAAAACGAGCTACGAGGGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACATATTACTTTCTAAGTGGAAGAGGATTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGTTGAAGAGTACTCTCCTCCCATTTCACCACCAAATTTACCCAATACTTCTCCATCTTTACATTCATTAATATGGCCTTTCTCCCTCTTGCTATCCATCAACATTTCCATGGCTAATTCCTTCTTCTAA

Coding sequence (CDS)

ATGCTCGGGATGGCGGCGGAGGCAGTGACAACCATGGCGGTCGTGGCGGTGGCCGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTGTTGCATAGGGTTGGAGGAGGAAAATATACTTGGACACCTAATATTAACTTCACTGATTGGTCAATTCATGAACACTTTTATGTTGTGAACAAAACGAGCTACGAGGGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACATATTACTTTCTAAATTTTGGGTTTGATAAACATATCTACAACGTGTTGGAAGTGAACAAAACGAGCTACGAGGGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACATATTACTTTCTAAGTGGAAGAGGATTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGTTGAAGAGTACTCTCCTCCCATTTCACCACCAAATTTACCCAATACTTCTCCATCTTTACATTCATTAATATGGCCTTTCTCCCTCTTGCTATCCATCAACATTTCCATGGCTAATTCCTTCTTCTAA

Protein sequence

MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLNFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSINISMANSFF
Homology
[Close]
BLAST of ClCG03G014080 vs. Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13
Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 1 

Query: 89  EAKTYY---FLNFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG-GRDVFNLTEAKTYY 148
           + K +Y   +L F FD++ +N+LEVNKT YEGC     I N TRG GRD+  L + K YY
Sbjct: 48  QGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYY 107

Query: 149 FLSGRGFCFQGMKVAVFVEEYSPP 169
            L G+G C+ GMK++V VE+  PP
Sbjct: 108 LLDGKGGCYGGMKLSVKVEKLPPP 131


HSP 2 Score: 57.4 bits (137), Expect = 2.1e-07
Identity = 34/83 (40.96%), Postives = 41/83 (49.40%), Query Frame = 1 

Query: 33  HRVGGGKYTWTPNINFTDWSIHEHFYV-----------------VNKTSYEGCNDKDFIF 92
           + VG  K+ W PNIN+T W+  +HFY+                 VNKT YEGC     I 
Sbjct: 29  YTVGENKF-WNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCIADHPIR 88

Query: 93  NITRG-GRDVFNLTEAKTYYFLN 98
           N TRG GRD+  L + K YY L+
Sbjct: 89  NWTRGAGRDIVTLNQTKHYYLLD 110

[Close]
BLAST of ClCG03G014080 vs. TrEMBL
Match: A0A151TDQ0_CAJCA (Lamin-like protein OS=Cajanus cajan GN=KK1_011355 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.1e-34
Identity = 77/154 (50.00%), Postives = 90/154 (58.44%), Query Frame = 1 

Query: 23  FGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVVNKTSYEGCNDKDFIFNITRGGR 82
           + +EGR P LHRVGGG+YTWTP +NFT W+ HEHFY                        
Sbjct: 9   YKIEGRDPTLHRVGGGRYTWTPKVNFTKWASHEHFY------------------------ 68

Query: 83  DVFNLTEAKTYYFLNFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKT 142
                     + +  F   KHIYNVLEVNKT+YE C D  FI NITRGGRDVF L EA+ 
Sbjct: 69  -------KGDWLYFGFD--KHIYNVLEVNKTNYENCIDTSFINNITRGGRDVFQLLEARP 128

Query: 143 YYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPN 177
           YYFL GRGFC QGMK+A+ V E +P + P  L N
Sbjct: 129 YYFLCGRGFCSQGMKIAINVVESTPALPPTALSN 129

[Close]
BLAST of ClCG03G014080 vs. TrEMBL
Match: K7N1P4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G053100 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.0e-32
Identity = 74/154 (48.05%), Postives = 90/154 (58.44%), Query Frame = 1 

Query: 23  FGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVVNKTSYEGCNDKDFIFNITRGGR 82
           + +EGR P LHRVGGG+YTW+P +NFT W+ HEHFY                        
Sbjct: 20  YRIEGRDPTLHRVGGGRYTWSPKVNFTKWASHEHFY------------------------ 79

Query: 83  DVFNLTEAKTYYFLNFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKT 142
                     + +  F   K IYNVLEVNKT+YE C D  FI NITRGGRDVF L EA+ 
Sbjct: 80  -------KGDWLYFGFD--KRIYNVLEVNKTNYENCIDTGFIENITRGGRDVFQLLEARH 139

Query: 143 YYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPN 177
           YYF+ GRGFC QGMK+ + V+E +  + PP LPN
Sbjct: 140 YYFICGRGFCSQGMKLLIDVKEPTTTLPPPILPN 140

[Close]
BLAST of ClCG03G014080 vs. TrEMBL
Match: A0A067GB59_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g038845mg PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.3e-31
Identity = 80/172 (46.51%), Postives = 100/172 (58.14%), Query Frame = 1 

Query: 9   VTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVVNKTSYEGC 68
           +T M +++    ++ G       LHRVGG K  WTP++NFT+WS HE FYV         
Sbjct: 21  ITKMMMIS----MMMGCVSGTGTLHRVGG-KLGWTPSVNFTEWSSHESFYV--------- 80

Query: 69  NDKDFIFNITRGGRDVFNLTEAKTYYFLNFGFDKHIYNVLEVNKTSYEGCNDKDFIFNIT 128
           ND                      +   NF   K++YNVLEVNKTSYE CNDK FI NIT
Sbjct: 81  ND----------------------WLIFNFD--KNMYNVLEVNKTSYESCNDKGFIKNIT 140

Query: 129 RGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPS 181
           +GGRDVF LTE + YYFLSGRGFC+ G+K A+FV+E +P  +P    N SPS
Sbjct: 141 KGGRDVFQLTEPRPYYFLSGRGFCWGGLKAAIFVQETAPTPAPVQARNGSPS 154

[Close]
BLAST of ClCG03G014080 vs. TrEMBL
Match: A0A0B2RY79_GLYSO (Lamin-like protein (Fragment) OS=Glycine soja GN=glysoja_042606 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-30
Identity = 71/150 (47.33%), Postives = 87/150 (58.00%), Query Frame = 1 

Query: 23  FGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVVNKTSYEGCNDKDFIFNITRGGR 82
           + +EGR P LHRVGGG+YTW+P +NFT W+ HEHFY                        
Sbjct: 10  YRIEGRDPTLHRVGGGRYTWSPKVNFTKWASHEHFY------------------------ 69

Query: 83  DVFNLTEAKTYYFLNFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKT 142
                     + +  F   K IYNVLEVNKT+YE C D  FI NITRGGRDVF L EA+ 
Sbjct: 70  -------KGDWLYFGFD--KRIYNVLEVNKTNYENCIDTGFIENITRGGRDVFQLLEARH 126

Query: 143 YYFLSGRGFCFQGMKVAVFVEEYSPPISPP 173
           YYF+ GRGFC QGMK+ + V+E +  + PP
Sbjct: 130 YYFICGRGFCSQGMKLLIDVKEPTTTLPPP 126

[Close]
BLAST of ClCG03G014080 vs. TrEMBL
Match: V4UXI2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012903mg PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.1e-30
Identity = 79/172 (45.93%), Postives = 100/172 (58.14%), Query Frame = 1 

Query: 9   VTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVVNKTSYEGC 68
           +T M +++    ++ G       LHRVGG K  WTP++NFT+WS HE FYV         
Sbjct: 21  ITKMMMIS----MMMGCVSGTGTLHRVGG-KLGWTPSVNFTEWSSHESFYV--------- 80

Query: 69  NDKDFIFNITRGGRDVFNLTEAKTYYFLNFGFDKHIYNVLEVNKTSYEGCNDKDFIFNIT 128
           ND                      +   NF   K++YNVLEVNKTSYE CND+ FI NIT
Sbjct: 81  ND----------------------WLIFNFD--KNMYNVLEVNKTSYESCNDQGFIKNIT 140

Query: 129 RGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPS 181
           +GGRDVF LTE + YYFLSGRGFC+ G+K A+FV+E +P  +P    N SPS
Sbjct: 141 KGGRDVFQLTEPRPYYFLSGRGFCWGGLKAAIFVQETTPTPAPVQARNGSPS 154

[Close]
BLAST of ClCG03G014080 vs. TAIR10
Match: AT2G27035.1 (AT2G27035.1 early nodulin-like protein 20)

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-23
Identity = 48/87 (55.17%), Postives = 62/87 (71.26%), Query Frame = 1 

Query: 95  FLNFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQ 154
           +L FGF++  +N+L+VNK+SYE C D D+IFNITRGGRDVF L E K YYF+ GRG+C +
Sbjct: 57  WLYFGFNRTRHNILQVNKSSYEQCVDNDYIFNITRGGRDVFQLLEPKPYYFICGRGYCLK 116

Query: 155 GMKVAVFVEEYSPPISPPNLPNTSPSL 182
           GMK+A+ V    PP +P N  +T+  L
Sbjct: 117 GMKLAITVLPQPPPSAPTNFTSTTTPL 143


HSP 2 Score: 97.1 bits (240), Expect = 1.4e-20
Identity = 49/101 (48.51%), Postives = 59/101 (58.42%), Query Frame = 1 

Query: 13  AVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYV------------- 72
           A+V V   +L  V   +  LHRVGGG+YTW  ++NF+DW+ H+ FY              
Sbjct: 8   ALVYVTVMILIIVVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRH 67

Query: 73  ----VNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFL 97
               VNK+SYE C D D+IFNITRGGRDVF L E K YYF+
Sbjct: 68  NILQVNKSSYEQCVDNDYIFNITRGGRDVFQLLEPKPYYFI 108

[Close]
BLAST of ClCG03G014080 vs. TAIR10
Match: AT5G15350.1 (AT5G15350.1 early nodulin-like protein 17)

HSP 1 Score: 78.2 bits (191), Expect = 6.6e-15
Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 1 

Query: 89  EAKTYY---FLNFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG-GRDVFNLTEAKTYY 148
           + K +Y   +L F FD++ +N+LEVNKT YEGC     I N TRG GRD+  L + K YY
Sbjct: 48  QGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYY 107

Query: 149 FLSGRGFCFQGMKVAVFVEEYSPP 169
            L G+G C+ GMK++V VE+  PP
Sbjct: 108 LLDGKGGCYGGMKLSVKVEKLPPP 131


HSP 2 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 34/83 (40.96%), Postives = 41/83 (49.40%), Query Frame = 1 

Query: 33  HRVGGGKYTWTPNINFTDWSIHEHFYV-----------------VNKTSYEGCNDKDFIF 92
           + VG  K+ W PNIN+T W+  +HFY+                 VNKT YEGC     I 
Sbjct: 29  YTVGENKF-WNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCIADHPIR 88

Query: 93  NITRG-GRDVFNLTEAKTYYFLN 98
           N TRG GRD+  L + K YY L+
Sbjct: 89  NWTRGAGRDIVTLNQTKHYYLLD 110

[Close]
BLAST of ClCG03G014080 vs. TAIR10
Match: AT4G12880.1 (AT4G12880.1 early nodulin-like protein 19)

HSP 1 Score: 72.4 bits (176), Expect = 3.6e-13
Identity = 43/91 (47.25%), Postives = 51/91 (56.04%), Query Frame = 1 

Query: 89  EAKTYY---FLNFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG-GRDVFNLTEAKTYY 148
           + K +Y   +L F F +  +N+LEVNK  YE C     I N TRG GRD+  L E + YY
Sbjct: 48  QGKHFYVGDWLYFVFYRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYY 107

Query: 149 FLSGRGFCFQGMKVAVFVEEYSPPISPPNLP 176
            L GRG C QGMK+ V VE  +PP  PP  P
Sbjct: 108 LLDGRGGCVQGMKLDVLVE--TPPPPPPFTP 136


HSP 2 Score: 53.9 bits (128), Expect = 1.3e-07
Identity = 32/79 (40.51%), Postives = 36/79 (45.57%), Query Frame = 1 

Query: 37  GGKYTWTPNINFTDWSIHEHFYV-----------------VNKTSYEGCNDKDFIFNITR 96
           G K  W PNIN+T W+  +HFYV                 VNK  YE C     I N TR
Sbjct: 32  GDKKFWNPNINYTLWAQGKHFYVGDWLYFVFYRDQHNILEVNKADYEKCISNRPIRNYTR 91

Query: 97  G-GRDVFNLTEAKTYYFLN 98
           G GRD+  L E + YY L+
Sbjct: 92  GAGRDIVPLYETRRYYLLD 110

[Close]
BLAST of ClCG03G014080 vs. TAIR10
Match: AT3G01070.1 (AT3G01070.1 early nodulin-like protein 16)

HSP 1 Score: 51.2 bits (121), Expect = 8.6e-07
Identity = 29/81 (35.80%), Postives = 41/81 (50.62%), Query Frame = 1 

Query: 35  VGGGKYTWTPNINFTDWSIHEHFYV-----------------VNKTSYEGCNDKDFIFNI 94
           VG  K+ W PNIN+T W+  +HFY+                 VN+T+Y  CN  + I N 
Sbjct: 29  VGDNKF-WNPNINYTIWAQDKHFYLDDWLYFVYERNQYNVIEVNETNYISCNPNNPIANW 88

Query: 95  TRG-GRDVFNLTEAKTYYFLN 98
           +RG GRD+ +L   + YY ++
Sbjct: 89  SRGAGRDLVHLNVTRHYYLIS 108

[Close]
BLAST of ClCG03G014080 vs. NCBI nr
Match: gi|659100428|ref|XP_008451094.1| (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 172.2 bits (435), Expect = 9.5e-40
Identity = 88/108 (81.48%), Postives = 91/108 (84.26%), Query Frame = 1 

Query: 95  FLNFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQ 154
           +L FGFDKHIYNVLEVNKTSYE CNDKDFIFNIT+GGRDVFNLTEAKTYYFLSGRGFCFQ
Sbjct: 61  WLYFGFDKHIYNVLEVNKTSYENCNDKDFIFNITKGGRDVFNLTEAKTYYFLSGRGFCFQ 120

Query: 155 GMKVAVFVEEYSPP----ISPPNL----PNTSPSLHSLIWPFSLLLSI 195
           GMKVAVFVEEYS P    ISPPNL    PN SPSL  L+ PFS LL I
Sbjct: 121 GMKVAVFVEEYSTPPPTIISPPNLPKNNPNLSPSLKPLLIPFSFLLLI 168

[Close]
BLAST of ClCG03G014080 vs. NCBI nr
Match: gi|659100428|ref|XP_008451094.1| (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 164.9 bits (416), Expect = 1.5e-37
Identity = 82/114 (71.93%), Postives = 86/114 (75.44%), Query Frame = 1 

Query: 1   MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYV- 60
           M GMAA+ V T  VV V GWLL GVEG+QPVLH VGGGKYTWT NINFTDWSIHEHFYV 
Sbjct: 1   MFGMAAKVVIT-TVVVVVGWLLCGVEGKQPVLHNVGGGKYTWTTNINFTDWSIHEHFYVG 60

Query: 61  ----------------VNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLN 98
                           VNKTSYE CNDKDFIFNIT+GGRDVFNLTEAKTYYFL+
Sbjct: 61  DWLYFGFDKHIYNVLEVNKTSYENCNDKDFIFNITKGGRDVFNLTEAKTYYFLS 113


HSP 2 Score: 152.1 bits (383), Expect = 1.0e-33
Identity = 77/154 (50.00%), Postives = 90/154 (58.44%), Query Frame = 1 

Query: 23  FGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVVNKTSYEGCNDKDFIFNITRGGR 82
           + +EGR P LHRVGGG+YTWTP +NFT W+ HEHFY                        
Sbjct: 9   YKIEGRDPTLHRVGGGRYTWTPKVNFTKWASHEHFY------------------------ 68

Query: 83  DVFNLTEAKTYYFLNFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKT 142
                     + +  F   KHIYNVLEVNKT+YE C D  FI NITRGGRDVF L EA+ 
Sbjct: 69  -------KGDWLYFGFD--KHIYNVLEVNKTNYENCIDTSFINNITRGGRDVFQLLEARP 128

Query: 143 YYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPN 177
           YYFL GRGFC QGMK+A+ V E +P + P  L N
Sbjct: 129 YYFLCGRGFCSQGMKIAINVVESTPALPPTALSN 129

[Close]
BLAST of ClCG03G014080 vs. NCBI nr
Match: gi|955392540|ref|XP_003556825.3| (PREDICTED: lamin-like protein [Glycine max])

HSP 1 Score: 146.7 bits (369), Expect = 4.3e-32
Identity = 74/154 (48.05%), Postives = 90/154 (58.44%), Query Frame = 1 

Query: 23  FGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVVNKTSYEGCNDKDFIFNITRGGR 82
           + +EGR P LHRVGGG+YTW+P +NFT W+ HEHFY                        
Sbjct: 20  YRIEGRDPTLHRVGGGRYTWSPKVNFTKWASHEHFY------------------------ 79

Query: 83  DVFNLTEAKTYYFLNFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKT 142
                     + +  F   K IYNVLEVNKT+YE C D  FI NITRGGRDVF L EA+ 
Sbjct: 80  -------KGDWLYFGFD--KRIYNVLEVNKTNYENCIDTGFIENITRGGRDVFQLLEARH 139

Query: 143 YYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPN 177
           YYF+ GRGFC QGMK+ + V+E +  + PP LPN
Sbjct: 140 YYFICGRGFCSQGMKLLIDVKEPTTTLPPPILPN 140

[Close]
BLAST of ClCG03G014080 vs. NCBI nr
Match: gi|641853889|gb|KDO72707.1| (hypothetical protein CISIN_1g038845mg [Citrus sinensis])

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30
Identity = 80/172 (46.51%), Postives = 100/172 (58.14%), Query Frame = 1 

Query: 9   VTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVVNKTSYEGC 68
           +T M +++    ++ G       LHRVGG K  WTP++NFT+WS HE FYV         
Sbjct: 21  ITKMMMIS----MMMGCVSGTGTLHRVGG-KLGWTPSVNFTEWSSHESFYV--------- 80

Query: 69  NDKDFIFNITRGGRDVFNLTEAKTYYFLNFGFDKHIYNVLEVNKTSYEGCNDKDFIFNIT 128
           ND                      +   NF   K++YNVLEVNKTSYE CNDK FI NIT
Sbjct: 81  ND----------------------WLIFNFD--KNMYNVLEVNKTSYESCNDKGFIKNIT 140

Query: 129 RGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPS 181
           +GGRDVF LTE + YYFLSGRGFC+ G+K A+FV+E +P  +P    N SPS
Sbjct: 141 KGGRDVFQLTEPRPYYFLSGRGFCWGGLKAAIFVQETAPTPAPVQARNGSPS 154

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BLAST of ClCG03G014080 vs. NCBI nr
Match: gi|734416000|gb|KHN37960.1| (Lamin-like protein, partial [Glycine soja])

HSP 1 Score: 141.4 bits (355), Expect = 1.8e-30
Identity = 71/150 (47.33%), Postives = 87/150 (58.00%), Query Frame = 1 

Query: 23  FGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVVNKTSYEGCNDKDFIFNITRGGR 82
           + +EGR P LHRVGGG+YTW+P +NFT W+ HEHFY                        
Sbjct: 10  YRIEGRDPTLHRVGGGRYTWSPKVNFTKWASHEHFY------------------------ 69

Query: 83  DVFNLTEAKTYYFLNFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKT 142
                     + +  F   K IYNVLEVNKT+YE C D  FI NITRGGRDVF L EA+ 
Sbjct: 70  -------KGDWLYFGFD--KRIYNVLEVNKTNYENCIDTGFIENITRGGRDVFQLLEARH 126

Query: 143 YYFLSGRGFCFQGMKVAVFVEEYSPPISPP 173
           YYF+ GRGFC QGMK+ + V+E +  + PP
Sbjct: 130 YYFICGRGFCSQGMKLLIDVKEPTTTLPPP 126

The following BLAST results are available for this feature:
BLAST of ClCG03G014080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LAML_ARATH1.2e-1348.81Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1[more]
BLAST of ClCG03G014080 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A151TDQ0_CAJCA7.1e-3450.00Lamin-like protein OS=Cajanus cajan GN=KK1_011355 PE=4 SV=1[more]
K7N1P4_SOYBN3.0e-3248.05Uncharacterized protein OS=Glycine max GN=GLYMA_20G053100 PE=4 SV=1[more]
A0A067GB59_CITSI7.3e-3146.51Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g038845mg PE=4 SV=1[more]
A0A0B2RY79_GLYSO1.3e-3047.33Lamin-like protein (Fragment) OS=Glycine soja GN=glysoja_042606 PE=4 SV=1[more]
V4UXI2_9ROSI2.1e-3045.93Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012903mg PE=4 SV=1[more]
BLAST of ClCG03G014080 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G27035.11.7e-2355.17 early nodulin-like protein 20[more]
AT5G15350.16.6e-1548.81 early nodulin-like protein 17[more]
AT4G12880.13.6e-1347.25 early nodulin-like protein 19[more]
AT3G01070.18.6e-0735.80 early nodulin-like protein 16[more]
BLAST of ClCG03G014080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659100428|ref|XP_008451094.1|9.5e-4081.48PREDICTED: lamin-like protein [Cucumis melo][more]
gi|659100428|ref|XP_008451094.1|1.5e-3771.93PREDICTED: lamin-like protein [Cucumis melo][more]
gi|955392540|ref|XP_003556825.3|4.3e-3248.05PREDICTED: lamin-like protein [Glycine max][more]
gi|641853889|gb|KDO72707.1|1.1e-3046.51hypothetical protein CISIN_1g038845mg [Citrus sinensis][more]
gi|734416000|gb|KHN37960.1|1.8e-3047.33Lamin-like protein, partial [Glycine soja][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003245Phytocyanin_dom
IPR008972Cupredoxin
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0046658 anchored component of plasma membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G014080.1ClCG03G014080.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003245Phytocyanin domainPRODOMPD003122coord: 98..162
score: 8.0E-20coord: 60..96
score: 2.
IPR003245Phytocyanin domainPFAMPF02298Cu_bind_likecoord: 95..156
score: 5.
IPR003245Phytocyanin domainPROFILEPS51485PHYTOCYANINcoord: 31..164
score: 21
IPR008972CupredoxinGENE3DG3DSA:2.60.40.420coord: 97..167
score: 1.8E-13coord: 57..96
score: 3.
IPR008972CupredoxinunknownSSF49503Cupredoxinscoord: 96..162
score: 2.27E-13coord: 33..96
score: 5.3
NoneNo IPR availablePANTHERPTHR33021FAMILY NOT NAMEDcoord: 12..60
score: 1.8E-52coord: 98..183
score: 1.8
NoneNo IPR availablePANTHERPTHR33021:SF4EARLY NODULIN-LIKE PROTEIN 20coord: 12..60
score: 1.8E-52coord: 98..183
score: 1.8