CmoCh10G010250 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh10G010250
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionEarly nodulin-like protein 20, putative
LocationCmo_Chr10 : 5380423 .. 5381059 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGGGATGACAGTAGAGGCGACGACCGTGACAACAGTGGCGGTGGTAGTCACGATGGCGGGGTGGTTGCTCGGTGGAGTTGAGGGTAGAGAACCAGTGTTGCATAGAGTTGGAGGAGGAAAATACACTTGGACAACTAATGTTAACTTCACTGATTGGTCAATTCACGAGCACTTTTACGTTGGTGATTGGCTCTGTAAGTTTTTCATATAAACTTAGGGTAAGAAGTCGAATATCGATCAAATACGAAGATCGTTTAAAGAAGCTGGTTTTTCTCCGTTACTAACGTTTTCTTTAACAATTTTTAGATTTCGGGTTCGATAAACGTATCTACAACGTGCTACAAGTAAACAAAACGAGCTACGACAGTTGCAACGAGAATGATTTCGTTTTCAACGTGACGAGAGGGGGACGAGACGTGTTCAATCTAACACAAGCAAAGCCATACTACTTTCTAAGTGGAAGAGGGTTTTGTTTTCAAGGAATGAAGGTTGCTATCTTTGTTGAAGACTCGCCTCCCATTTCATCACCCAAAATTTCAAACCATTCTTCATCTATTCAACCATTAAAGCCTCTCTCATCCCTCTCGGTATTGATCACGCTTGCCTTCACTAAAATCGTTCTTCTAAATTAG

mRNA sequence

ATGTTCGGGATGACAGTAGAGGCGACGACCGTGACAACAGTGGCGGTGGTAGTCACGATGGCGGGGTGGTTGCTCGGTGGAGTTGAGGGTAGAGAACCAGTGTTGCATAGAGTTGGAGGAGGAAAATACACTTGGACAACTAATGTTAACTTCACTGATTGGTCAATTCACGAGCACTTTTACGTTGGTGATTGGCTCTATTTCGGGTTCGATAAACGTATCTACAACGTGCTACAAGTAAACAAAACGAGCTACGACAGTTGCAACGAGAATGATTTCGTTTTCAACGTGACGAGAGGGGGACGAGACGTGTTCAATCTAACACAAGCAAAGCCATACTACTTTCTAAGTGGAAGAGGGTTTTGTTTTCAAGGAATGAAGGTTGCTATCTTTGTTGAAGACTCGCCTCCCATTTCATCACCCAAAATTTCAAACCATTCTTCATCTATTCAACCATTAAAGCCTCTCTCATCCCTCTCGGTATTGATCACGCTTGCCTTCACTAAAATCGTTCTTCTAAATTAG

Coding sequence (CDS)

ATGTTCGGGATGACAGTAGAGGCGACGACCGTGACAACAGTGGCGGTGGTAGTCACGATGGCGGGGTGGTTGCTCGGTGGAGTTGAGGGTAGAGAACCAGTGTTGCATAGAGTTGGAGGAGGAAAATACACTTGGACAACTAATGTTAACTTCACTGATTGGTCAATTCACGAGCACTTTTACGTTGGTGATTGGCTCTATTTCGGGTTCGATAAACGTATCTACAACGTGCTACAAGTAAACAAAACGAGCTACGACAGTTGCAACGAGAATGATTTCGTTTTCAACGTGACGAGAGGGGGACGAGACGTGTTCAATCTAACACAAGCAAAGCCATACTACTTTCTAAGTGGAAGAGGGTTTTGTTTTCAAGGAATGAAGGTTGCTATCTTTGTTGAAGACTCGCCTCCCATTTCATCACCCAAAATTTCAAACCATTCTTCATCTATTCAACCATTAAAGCCTCTCTCATCCCTCTCGGTATTGATCACGCTTGCCTTCACTAAAATCGTTCTTCTAAATTAG
Homology
[Close]
BLAST of CmoCh10G010250 vs. Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-23
Identity = 62/156 (39.74%), Postives = 92/156 (58.97%), Query Frame = 1 

Query: 12  TTVAVVVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGFD 71
           T +   V +A  +   + G     + VG  K+ W  N+N+T W+  +HFY+GDWLYF FD
Sbjct: 5   TVLITAVVLAFLMAAPMPGVTAKKYTVGENKF-WNPNINYTIWAQGKHFYLGDWLYFVFD 64

Query: 72  KRIYNVLQVNKTSYDSCNENDFVFNVTRG-GRDVFNLTQAKPYYFLSGRGFCFQGMKVAI 131
           +  +N+L+VNKT Y+ C  +  + N TRG GRD+  L Q K YY L G+G C+ GMK+++
Sbjct: 65  RNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSV 124

Query: 132 FVEDSPPISSPKISNHSSSIQPLKPLSSLSVLITLA 167
            VE  PP   PK +       P+K + S+S++  LA
Sbjct: 125 KVEKLPP--PPKSA-------PVKNIGSVSMVTGLA 150

[Close]
BLAST of CmoCh10G010250 vs. Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-09
Identity = 42/124 (33.87%), Postives = 60/124 (48.39%), Query Frame = 1 

Query: 40  GGKYTWTTNV--NFTDWSIHEHFYVGDWLYFGFDKRIYNVLQVNKTSYDSCNENDFVFNV 99
           GG   W TN   N+  WS    F V D LYF + K   +VL+VNK  YD+CN  + +  V
Sbjct: 34  GGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRV 93

Query: 100 TRGGRDVFNLTQAKPYYFLSG-RGFCFQGMKVAIFV--------EDSPPISSPKISNHSS 153
             G  ++ +L +  P+YF+SG    C +G K+ + V          SP  ++P  S   S
Sbjct: 94  DDGDSEI-SLDRYGPFYFISGNEDNCKKGQKLNVVVISARIPSTAQSPHAAAPGSSTPGS 153

[Close]
BLAST of CmoCh10G010250 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.2e-08
Identity = 37/102 (36.27%), Postives = 55/102 (53.92%), Query Frame = 1 

Query: 35  LHRVGGGKYTWTTNV--NFTDWSIHEHFYVGDWLYFGFDKRIYNVLQVNKTSYDSCNEND 94
           +H+VG     WTT V  ++  W+    F+VGD L F ++ + +NVLQV++  + SCN + 
Sbjct: 3   VHKVGDST-GWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSS 62

Query: 95  FVFNVTRGGRDVFNLTQAKPYYFLSG-RGFCFQGMKVAIFVE 134
              + T  G D   L +   +YFL G  G C  G KV I V+
Sbjct: 63  PAASYT-SGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVD 102

[Close]
BLAST of CmoCh10G010250 vs. TrEMBL
Match: A0A059C599_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01880 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 7.6e-45
Identity = 87/139 (62.59%), Postives = 103/139 (74.10%), Query Frame = 1 

Query: 11  VTTVAVVVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGF 70
           V  +  V+ M G    G EGR+PVLHRVGGG+ TWT +VNFT+WS HE FYVGDWLYFGF
Sbjct: 8   VVMIVAVLVMLGVRGSGAEGRKPVLHRVGGGQNTWTPSVNFTNWSSHEQFYVGDWLYFGF 67

Query: 71  DKRIYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRGFCFQGMKVAI 130
           DK  YNVL+VN+TSYD C + DF+ NVT+GGRDVFNL  AKPYYF+ GRG+CF GMKVA+
Sbjct: 68  DKTQYNVLEVNETSYDKCIDTDFITNVTKGGRDVFNLIDAKPYYFICGRGYCFNGMKVAV 127

Query: 131 FVEDSPPISSPKISNHSSS 150
            V  +PP+  P     S S
Sbjct: 128 NVTVAPPLPPPPKKGGSPS 146

[Close]
BLAST of CmoCh10G010250 vs. TrEMBL
Match: V4U6E0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016919mg PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.5e-44
Identity = 94/160 (58.75%), Postives = 116/160 (72.50%), Query Frame = 1 

Query: 14  VAVVVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGFDKR 73
           + V+VTM+  L    E R PVLHRVGGGKYTW  NVNFT W+ H+HFYVGDWLYFGFDK 
Sbjct: 13  IVVMVTMSV-LCAHTESRSPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFDKH 72

Query: 74  IYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRG-FCFQGMKVAIFV 133
            YNVLQVNKT+Y+ C + DF+ NVTRGGRDVFNLT+AKP+YF+ GRG +C +GMK+A+ V
Sbjct: 73  KYNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAVHV 132

Query: 134 EDS--PPISSPKISNHSSSIQPLKPLSSLSVLITLAFTKI 171
           E    PP +SP ++  S+S  P      L +  T+AF  I
Sbjct: 133 ETDPPPPTASPNLT-ISASPSPSSIHGHLLLACTIAFLSI 170

[Close]
BLAST of CmoCh10G010250 vs. TrEMBL
Match: G7J772_MEDTR (Early nodulin-like protein OS=Medicago truncatula GN=MTR_3g117110 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.5e-44
Identity = 92/170 (54.12%), Postives = 118/170 (69.41%), Query Frame = 1 

Query: 4   MTVEATTVTTVAVVVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVG 63
           M V    +  + +++TM  +    +EGREPVLHRVGGG+YTW   +NFT+W+ +EHFY G
Sbjct: 1   MEVGRKIIVCLLMIITMGSYR---IEGREPVLHRVGGGRYTWDPKINFTNWASNEHFYQG 60

Query: 64  DWLYFGFDKRIYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRGFCF 123
           DWLYFGFDK IYNVL+VNKT+Y+ C +  F+ N+TRGGRDVF L +AK YYFL GRGFCF
Sbjct: 61  DWLYFGFDKHIYNVLEVNKTNYEKCVDKGFISNITRGGRDVFQLLEAKTYYFLCGRGFCF 120

Query: 124 QGMKVAIFVEDSPP-ISSPKISNHSSSIQPLKPLSSLSVLITLAFTKIVL 173
            GMKV I VE  PP  +SP +   + S + +  +   SVL+ LA T I L
Sbjct: 121 HGMKVDINVEPLPPDNASPIVPEKACSTRKMNQIKLSSVLLVLAMTWIFL 167

[Close]
BLAST of CmoCh10G010250 vs. TrEMBL
Match: A0A061GYJ4_THECC (Early nodulin-like protein 20, putative OS=Theobroma cacao GN=TCM_042030 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.1e-43
Identity = 81/139 (58.27%), Postives = 104/139 (74.82%), Query Frame = 1 

Query: 14  VAVVVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGFDKR 73
           + + + M    +  V GR+PV H VGGG+Y W  +VNF++WS H+ FYVGDWLYFGFDK 
Sbjct: 33  ILIRLMMVAMSMKMVHGRDPVRHDVGGGRYGWKPDVNFSEWSNHQLFYVGDWLYFGFDKN 92

Query: 74  IYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRGFCFQGMKVAIFVE 133
           +Y+VL+VNKTSY+ CNE DF+ N+TRGGRDVF L +A+PYYF+SGRGFCF GMKVA+ VE
Sbjct: 93  LYSVLEVNKTSYEKCNETDFMTNITRGGRDVFELKEARPYYFISGRGFCFDGMKVAVRVE 152

Query: 134 DSPPISSPKISNHSSSIQP 153
           D+PP  +P    +S    P
Sbjct: 153 DTPPAPAPSPGKNSGWTSP 171

[Close]
BLAST of CmoCh10G010250 vs. TrEMBL
Match: A0A067FSC1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030501mg PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-43
Identity = 94/160 (58.75%), Postives = 116/160 (72.50%), Query Frame = 1 

Query: 14  VAVVVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGFDKR 73
           + V+VTM+  L    E R PVLHRVGGGKYTW  NVNFT W+ H+HFYVGDWLYFGFDK 
Sbjct: 13  IVVMVTMSV-LCVHTESRSPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFDKH 72

Query: 74  IYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRG-FCFQGMKVAIFV 133
            YNVLQVNKT+Y+ C + DF+ NVTRGGRDVFNLT+AKP+YF+ GRG +C +GMK+A+ V
Sbjct: 73  KYNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAVHV 132

Query: 134 EDS--PPISSPKISNHSSSIQPLKPLSSLSVLITLAFTKI 171
           E    PP +SP ++  S+S  P      L +  T+AF  I
Sbjct: 133 ETDPPPPTASPNLT-ISASPSPSSIHGHLLLACTIAFLSI 170

[Close]
BLAST of CmoCh10G010250 vs. TAIR10
Match: AT2G27035.1 (AT2G27035.1 early nodulin-like protein 20)

HSP 1 Score: 171.0 bits (432), Expect = 6.4e-43
Identity = 77/142 (54.23%), Postives = 108/142 (76.06%), Query Frame = 1 

Query: 32  EPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGFDKRIYNVLQVNKTSYDSCNEN 91
           E  LHRVGGG+YTW ++VNF+DW+ H+ FY GDWLYFGF++  +N+LQVNK+SY+ C +N
Sbjct: 24  ESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRHNILQVNKSSYEQCVDN 83

Query: 92  DFVFNVTRGGRDVFNLTQAKPYYFLSGRGFCFQGMKVAIFVEDSPPISSPKISNHSSSIQ 151
           D++FN+TRGGRDVF L + KPYYF+ GRG+C +GMK+AI V   PP S+P  +N +S+  
Sbjct: 84  DYIFNITRGGRDVFQLLEPKPYYFICGRGYCLKGMKLAITVLPQPPPSAP--TNFTSTTT 143

Query: 152 PLKPLSSLSVLITLAFTKIVLL 174
           PL P ++++  I +   K +LL
Sbjct: 144 PLIPPNAITAAILIFAFKALLL 163

[Close]
BLAST of CmoCh10G010250 vs. TAIR10
Match: AT5G15350.1 (AT5G15350.1 early nodulin-like protein 17)

HSP 1 Score: 110.9 bits (276), Expect = 7.9e-25
Identity = 62/156 (39.74%), Postives = 92/156 (58.97%), Query Frame = 1 

Query: 12  TTVAVVVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGFD 71
           T +   V +A  +   + G     + VG  K+ W  N+N+T W+  +HFY+GDWLYF FD
Sbjct: 5   TVLITAVVLAFLMAAPMPGVTAKKYTVGENKF-WNPNINYTIWAQGKHFYLGDWLYFVFD 64

Query: 72  KRIYNVLQVNKTSYDSCNENDFVFNVTRG-GRDVFNLTQAKPYYFLSGRGFCFQGMKVAI 131
           +  +N+L+VNKT Y+ C  +  + N TRG GRD+  L Q K YY L G+G C+ GMK+++
Sbjct: 65  RNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSV 124

Query: 132 FVEDSPPISSPKISNHSSSIQPLKPLSSLSVLITLA 167
            VE  PP   PK +       P+K + S+S++  LA
Sbjct: 125 KVEKLPP--PPKSA-------PVKNIGSVSMVTGLA 150

[Close]
BLAST of CmoCh10G010250 vs. TAIR10
Match: AT4G12880.1 (AT4G12880.1 early nodulin-like protein 19)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-23
Identity = 49/99 (49.49%), Postives = 64/99 (64.65%), Query Frame = 1 

Query: 40  GGKYTWTTNVNFTDWSIHEHFYVGDWLYFGFDKRIYNVLQVNKTSYDSCNENDFVFNVTR 99
           G K  W  N+N+T W+  +HFYVGDWLYF F +  +N+L+VNK  Y+ C  N  + N TR
Sbjct: 32  GDKKFWNPNINYTLWAQGKHFYVGDWLYFVFYRDQHNILEVNKADYEKCISNRPIRNYTR 91

Query: 100 G-GRDVFNLTQAKPYYFLSGRGFCFQGMKVAIFVEDSPP 138
           G GRD+  L + + YY L GRG C QGMK+ + VE  PP
Sbjct: 92  GAGRDIVPLYETRRYYLLDGRGGCVQGMKLDVLVETPPP 130

[Close]
BLAST of CmoCh10G010250 vs. TAIR10
Match: AT3G01070.1 (AT3G01070.1 early nodulin-like protein 16)

HSP 1 Score: 104.4 bits (259), Expect = 7.3e-23
Identity = 48/102 (47.06%), Postives = 71/102 (69.61%), Query Frame = 1 

Query: 38  VGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGFDKRIYNVLQVNKTSYDSCNENDFVFNV 97
           VG  K+ W  N+N+T W+  +HFY+ DWLYF +++  YNV++VN+T+Y SCN N+ + N 
Sbjct: 29  VGDNKF-WNPNINYTIWAQDKHFYLDDWLYFVYERNQYNVIEVNETNYISCNPNNPIANW 88

Query: 98  TRG-GRDVFNLTQAKPYYFLSGR-GFCFQGMKVAIFVEDSPP 138
           +RG GRD+ +L   + YY +SG  G C+ GMK+A+ VE  PP
Sbjct: 89  SRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKLAVLVEKPPP 129

[Close]
BLAST of CmoCh10G010250 vs. TAIR10
Match: AT4G27520.1 (AT4G27520.1 early nodulin-like protein 2)

HSP 1 Score: 64.3 bits (155), Expect = 8.4e-11
Identity = 42/124 (33.87%), Postives = 60/124 (48.39%), Query Frame = 1 

Query: 40  GGKYTWTTNV--NFTDWSIHEHFYVGDWLYFGFDKRIYNVLQVNKTSYDSCNENDFVFNV 99
           GG   W TN   N+  WS    F V D LYF + K   +VL+VNK  YD+CN  + +  V
Sbjct: 34  GGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRV 93

Query: 100 TRGGRDVFNLTQAKPYYFLSG-RGFCFQGMKVAIFV--------EDSPPISSPKISNHSS 153
             G  ++ +L +  P+YF+SG    C +G K+ + V          SP  ++P  S   S
Sbjct: 94  DDGDSEI-SLDRYGPFYFISGNEDNCKKGQKLNVVVISARIPSTAQSPHAAAPGSSTPGS 153

[Close]
BLAST of CmoCh10G010250 vs. NCBI nr
Match: gi|659100428|ref|XP_008451094.1| (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-59
Identity = 115/162 (70.99%), Postives = 136/162 (83.95%), Query Frame = 1 

Query: 1   MFGMTVEATTVTTVAVVVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHF 60
           MFGM  +   +TTV VVV   GWLL GVEG++PVLH VGGGKYTWTTN+NFTDWSIHEHF
Sbjct: 1   MFGMAAKVV-ITTVVVVV---GWLLCGVEGKQPVLHNVGGGKYTWTTNINFTDWSIHEHF 60

Query: 61  YVGDWLYFGFDKRIYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRG 120
           YVGDWLYFGFDK IYNVL+VNKTSY++CN+ DF+FN+T+GGRDVFNLT+AK YYFLSGRG
Sbjct: 61  YVGDWLYFGFDKHIYNVLEVNKTSYENCNDKDFIFNITKGGRDVFNLTEAKTYYFLSGRG 120

Query: 121 FCFQGMKVAIFVED--SPP---ISSPKISNHSSSIQP-LKPL 157
           FCFQGMKVA+FVE+  +PP   IS P +  ++ ++ P LKPL
Sbjct: 121 FCFQGMKVAVFVEEYSTPPPTIISPPNLPKNNPNLSPSLKPL 158

[Close]
BLAST of CmoCh10G010250 vs. NCBI nr
Match: gi|764605442|ref|XP_004305454.2| (PREDICTED: lamin-like protein [Fragaria vesca subsp. vesca])

HSP 1 Score: 189.5 bits (480), Expect = 4.9e-45
Identity = 88/144 (61.11%), Postives = 108/144 (75.00%), Query Frame = 1 

Query: 28  VEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGFDKRIYNVLQVNKTSYDS 87
           VE REPVLHRVGGG+ TW  ++NFTDWS  EHFY GDWLYFGFDK++YNVL+VNKTS +S
Sbjct: 15  VESREPVLHRVGGGRMTWIPDINFTDWSSKEHFYAGDWLYFGFDKQLYNVLEVNKTSCES 74

Query: 88  CNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRGFCFQGMKVAIFVEDSPPISSPKISNHS 147
           C + D+++NVTRGG DVFNLT+AK YYFLSGRG+C++GMKVA+FVE SPP       NH 
Sbjct: 75  CIDKDYIYNVTRGGSDVFNLTEAKTYYFLSGRGYCYKGMKVAVFVEQSPP---ELHRNHG 134

Query: 148 SSIQPLKPLSSLSVLITLAFTKIV 172
               P    + + +L  LA   I+
Sbjct: 135 LKSYPYTSSNFIIILTMLATMTII 155

[Close]
BLAST of CmoCh10G010250 vs. NCBI nr
Match: gi|702342545|ref|XP_010056607.1| (PREDICTED: lamin-like protein isoform X2 [Eucalyptus grandis])

HSP 1 Score: 188.3 bits (477), Expect = 1.1e-44
Identity = 87/139 (62.59%), Postives = 103/139 (74.10%), Query Frame = 1 

Query: 11  VTTVAVVVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGF 70
           V  +  V+ M G    G EGR+PVLHRVGGG+ TWT +VNFT+WS HE FYVGDWLYFGF
Sbjct: 8   VVMIVAVLVMLGVRGSGAEGRKPVLHRVGGGQNTWTPSVNFTNWSSHEQFYVGDWLYFGF 67

Query: 71  DKRIYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRGFCFQGMKVAI 130
           DK  YNVL+VN+TSYD C + DF+ NVT+GGRDVFNL  AKPYYF+ GRG+CF GMKVA+
Sbjct: 68  DKTQYNVLEVNETSYDKCIDTDFITNVTKGGRDVFNLIDAKPYYFICGRGYCFNGMKVAV 127

Query: 131 FVEDSPPISSPKISNHSSS 150
            V  +PP+  P     S S
Sbjct: 128 NVTVAPPLPPPPKKGGSPS 146

[Close]
BLAST of CmoCh10G010250 vs. NCBI nr
Match: gi|702342540|ref|XP_010056606.1| (PREDICTED: lamin-like protein isoform X1 [Eucalyptus grandis])

HSP 1 Score: 188.3 bits (477), Expect = 1.1e-44
Identity = 87/139 (62.59%), Postives = 103/139 (74.10%), Query Frame = 1 

Query: 11  VTTVAVVVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGF 70
           V  +  V+ M G    G EGR+PVLHRVGGG+ TWT +VNFT+WS HE FYVGDWLYFGF
Sbjct: 33  VVMIVAVLVMLGVRGSGAEGRKPVLHRVGGGQNTWTPSVNFTNWSSHEQFYVGDWLYFGF 92

Query: 71  DKRIYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRGFCFQGMKVAI 130
           DK  YNVL+VN+TSYD C + DF+ NVT+GGRDVFNL  AKPYYF+ GRG+CF GMKVA+
Sbjct: 93  DKTQYNVLEVNETSYDKCIDTDFITNVTKGGRDVFNLIDAKPYYFICGRGYCFNGMKVAV 152

Query: 131 FVEDSPPISSPKISNHSSS 150
            V  +PP+  P     S S
Sbjct: 153 NVTVAPPLPPPPKKGGSPS 171

[Close]
BLAST of CmoCh10G010250 vs. NCBI nr
Match: gi|567908153|ref|XP_006446390.1| (hypothetical protein CICLE_v10016919mg [Citrus clementina])

HSP 1 Score: 185.3 bits (469), Expect = 9.3e-44
Identity = 94/160 (58.75%), Postives = 116/160 (72.50%), Query Frame = 1 

Query: 14  VAVVVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGFDKR 73
           + V+VTM+  L    E R PVLHRVGGGKYTW  NVNFT W+ H+HFYVGDWLYFGFDK 
Sbjct: 13  IVVMVTMSV-LCAHTESRSPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFDKH 72

Query: 74  IYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRG-FCFQGMKVAIFV 133
            YNVLQVNKT+Y+ C + DF+ NVTRGGRDVFNLT+AKP+YF+ GRG +C +GMK+A+ V
Sbjct: 73  KYNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAVHV 132

Query: 134 EDS--PPISSPKISNHSSSIQPLKPLSSLSVLITLAFTKI 171
           E    PP +SP ++  S+S  P      L +  T+AF  I
Sbjct: 133 ETDPPPPTASPNLT-ISASPSPSSIHGHLLLACTIAFLSI 170

The following BLAST results are available for this feature:
BLAST of CmoCh10G010250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LAML_ARATH1.4e-2339.74Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1[more]
ENL2_ARATH1.5e-0933.87Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1[more]
MAVI_CUCPE2.2e-0836.27Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
BLAST of CmoCh10G010250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A059C599_EUCGR7.6e-4562.59Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01880 PE=4 SV=1[more]
V4U6E0_9ROSI6.5e-4458.75Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016919mg PE=4 SV=1[more]
G7J772_MEDTR8.5e-4454.12Early nodulin-like protein OS=Medicago truncatula GN=MTR_3g117110 PE=4 SV=1[more]
A0A061GYJ4_THECC1.1e-4358.27Early nodulin-like protein 20, putative OS=Theobroma cacao GN=TCM_042030 PE=4 SV... [more]
A0A067FSC1_CITSI1.4e-4358.75Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030501mg PE=4 SV=1[more]
BLAST of CmoCh10G010250 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G27035.16.4e-4354.23 early nodulin-like protein 20[more]
AT5G15350.17.9e-2539.74 early nodulin-like protein 17[more]
AT4G12880.11.1e-2349.49 early nodulin-like protein 19[more]
AT3G01070.17.3e-2347.06 early nodulin-like protein 16[more]
AT4G27520.18.4e-1133.87 early nodulin-like protein 2[more]
BLAST of CmoCh10G010250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659100428|ref|XP_008451094.1|1.2e-5970.99PREDICTED: lamin-like protein [Cucumis melo][more]
gi|764605442|ref|XP_004305454.2|4.9e-4561.11PREDICTED: lamin-like protein [Fragaria vesca subsp. vesca][more]
gi|702342545|ref|XP_010056607.1|1.1e-4462.59PREDICTED: lamin-like protein isoform X2 [Eucalyptus grandis][more]
gi|702342540|ref|XP_010056606.1|1.1e-4462.59PREDICTED: lamin-like protein isoform X1 [Eucalyptus grandis][more]
gi|567908153|ref|XP_006446390.1|9.3e-4458.75hypothetical protein CICLE_v10016919mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003245Phytocyanin_dom
IPR008972Cupredoxin
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G010250.1CmoCh10G010250.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003245Phytocyanin domainPRODOMPD003122coord: 68..132
score: 1.0
IPR003245Phytocyanin domainPFAMPF02298Cu_bind_likecoord: 45..126
score: 5.0
IPR003245Phytocyanin domainPROFILEPS51485PHYTOCYANINcoord: 34..134
score: 30
IPR008972CupredoxinGENE3DG3DSA:2.60.40.420coord: 36..137
score: 1.2
IPR008972CupredoxinunknownSSF49503Cupredoxinscoord: 35..132
score: 1.75
NoneNo IPR availablePANTHERPTHR33021FAMILY NOT NAMEDcoord: 16..174
score: 2.1
NoneNo IPR availablePANTHERPTHR33021:SF4EARLY NODULIN-LIKE PROTEIN 20coord: 16..174
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh10G010250Cucsa.142760Cucumber (Gy14) v1cgycmoB0395
CmoCh10G010250CmaCh10G009720Cucurbita maxima (Rimu)cmacmoB067
CmoCh10G010250Cla011066Watermelon (97103) v1cmowmB037
CmoCh10G010250ClCG03G014080Watermelon (Charleston Gray)cmowcgB045
CmoCh10G010250Lsi06G004450Bottle gourd (USVL1VR-Ls)cmolsiB059
CmoCh10G010250Cp4.1LG18g01270Cucurbita pepo (Zucchini)cmocpeB055
CmoCh10G010250MELO3C029408.2Melon (DHL92) v3.6.1cmomedB061
CmoCh10G010250CsaV3_1G042160Cucumber (Chinese Long) v3cmocucB0053
CmoCh10G010250Cla97C03G064260Watermelon (97103) v2cmowmbB046
CmoCh10G010250CsGy1G029030Cucumber (Gy14) v2cgybcmoB013
CmoCh10G010250Carg16974Silver-seed gourdcarcmoB0631
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh10G010250Cucurbita pepo (Zucchini)cmocpeB062
CmoCh10G010250Cucurbita pepo (Zucchini)cmocpeB074
CmoCh10G010250Silver-seed gourdcarcmoB0240
CmoCh10G010250Silver-seed gourdcarcmoB1227
CmoCh10G010250Wax gourdcmowgoB0072
CmoCh10G010250Wax gourdcmowgoB0082
CmoCh10G010250Cucurbita moschata (Rifu)cmocmoB044
CmoCh10G010250Cucurbita moschata (Rifu)cmocmoB072
CmoCh10G010250Cucurbita maxima (Rimu)cmacmoB105
CmoCh10G010250Cucurbita maxima (Rimu)cmacmoB538
CmoCh10G010250Cucurbita maxima (Rimu)cmacmoB573
CmoCh10G010250Wild cucumber (PI 183967)cmocpiB050
CmoCh10G010250Cucumber (Chinese Long) v2cmocuB047
CmoCh10G010250Melon (DHL92) v3.5.1cmomeB058