ClCG03G003460 (gene) Watermelon (Charleston Gray)

Overview
NameClCG03G003460
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRING finger protein
LocationCG_Chr03 : 3851346 .. 3853564 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGATTGTTATCAGAGGCTTTCTTCTGGCCATTCTTACAAAGATTTCCTTGAGTTTCTTGAAGCTGATATTCGCCATGCCAATGCTTTGTGAGCTCCTCTTTCTCTGATTTTATTTTATTTTATTTTTGTTTTATTTTATTTTTACATTTTTCTTTTCGAGTTCTTTATGGTTGATTGGTTGATGTCATGTCTTTTGGGGCTCTCTCTGAACCTTGATTATAGCATCTTTTGTTGTGGGATTTTGTAACCCATTGCAAAAGTTTCATATGTTGTAATTTACTTTACAAGTTAATGATACTTTAAAGTTAATGGAAATGTGACTGGCAAGAGTTGCCAAGGTTTGCCTTTATGGTGTTCTGGTTTTGAAGAGGAGAAAACAAAGTTAAGATCTTCTCTGCTTCGTTCGTATGAAATGTTATTGCTTAAAAAGAGGACTAAAAAGTAGTTTTGAAACATTTTAGAGGTATCCTTCAAAATTTTTGAGTCAATCCCATCTTAAAATCTCAATAAATTATGATCCTCATGGTCGTAAGTCGACTTTGGAGTAGGTGAAGCCTCTCCGGAGTTAGTAAGGTGGGCTACGAGCATAATGCAAGTAGCTGAGGTCTCGATAACCTGGTTATAAAAAAAAGTTATTTGAGGATAAAAGTTAATAGCAGCTCCCCTTCAGTTTCTCAATTGTTTCTAATAGATACTAGATGTTTGCTGTCATAATAGTTAGTTCTGGAGTTTATGTTAGTTCAAATATTGGAATGAAGCGATTGTCTTATATTGAAATATCTTTATATGATGCAGTGCAGCTTCATTTCCAAGAGGCAAGGATGGTTCATCCTTCCAGATGAAATTAGTTTGTAACCATTTGACACCAGTCATTCTTTACTTGCTTCAATGGGTGGATTGCTCATGTTCATATCTATCTTTGAGTTACTTCAACCTATTCCACATAGTTCTGTACAAGGTGAGCAAGTTGACTAAGAAGTTCTAAAAGTATTTGATATAAATTAGATTTACCATAATCCACCTGCTTAAACTTTTAAGTTGATTGATGATTTAACATGGTACCACAGTAGAAAATTATGTGTTTGAACCCTTGTAATGTCATTTACTCCTCTAACAAGTTTCAAACTCACAATTGACAAAGTGTTAAAGTATTTAATATAATTAAATTTGGCATAATTCAACAACTTAAGCTTTTAGGTTGATCGGTGATTTAACAAGAAGAAAAAAAGATAAAAGGGTAAAAGAAGAGAATAATGAAGTTTGATAATTTGTGTTAATCGACAGGTGGACTTTGATGGAAGGCCAGATATCTCATCATACAGAAGGAAAGCAACTATAAGTGAATTCTACTGTACGTGATCTATCTTTTCTGCTCCTTTATTTATCTTTATTGTTTTAAAGTTCTTTGAAGGTTGTGATATGTCAAGCAAAAAATTAGAATGTGCCTTTGCTCTGGCACGTTTCTTTTGTACATCAGTTGAAAACAATCATCCTCATGTATCTATTCTCTTCTGGAAAAGAGTTGTGGCAAACGGCTAACAATGTGCTTGCATATTGTTGTACGGTTAAAATAACCAGAAAACTTCAGTTCTTTTGTACTTCACAGTTTAAGATGATATTAATTCTCTTTAACATGAATGCAGCTGTTATATTGCCATCCCTACAACGGCTTTGTGATTATGCATCACAGGTAGATAGCATTGAAGATCCCCACAAGGGAATGGCCATCTCAAAGAGATTAGAACACAAGAGGGAACTTTTAGATTTGGACATAGAAAGAGAAGATGAATGTGGGATCTGTTTGGAGTCGCATACCAAAATTGTCTTGCCACATTGTTGCCATGCCTTGTGCACAAAATGCTACCATGATTGGTATTACTATTGAAGGCTTCACTCTTATGTCCACGTTTTTGACTCACTATATTCTTTATGGCTGATGTACTATTAGAGAAAAAAAAAAAAAAAAAAAAACCTTTGATGCTCCTTTCCCTCATCTGTTACAGGAAATCGAAATCGGAATCTTGCCCGTTCTGCCGAGGAAGTTTGAAGAGAGTAGCCTCAGGGGATCTGTGGGTTCTCACATGCAGTAATGACGTGGTCGACACTCATACTATCATGAAAGAAGATATGTTACGCTTCTATCTTTTCATAAACAACCTACCTGAGGATACACCTGATGTTCTATTCTTAATGTATTATGAGCACTTGTTGTAA

mRNA sequence

ATGTTGGATTGTTATCAGAGGCTTTCTTCTGGCCATTCTTACAAAGATTTCCTTGAGTTTCTTGAAGCTGATATTCGCCATGCCAATGCTTTTGCAGCTTCATTTCCAAGAGGCAAGGATGGTTCATCCTTCCAGATGAAATTAGTTTGTAACCATTTGACACCAGTGGACTTTGATGGAAGGCCAGATATCTCATCATACAGAAGGAAAGCAACTATAAGTGAATTCTACTCTGTTATATTGCCATCCCTACAACGGCTTTGTGATTATGCATCACAGGTAGATAGCATTGAAGATCCCCACAAGGGAATGGCCATCTCAAAGAGATTAGAACACAAGAGGGAACTTTTAGATTTGGACATAGAAAGAGAAGATGAATGTGGGATCTGTTTGGAGTCGCATACCAAAATTGTCTTGCCACATTGTTGCCATGCCTTGTGCACAAAATGCTACCATGATTGGAAATCGAAATCGGAATCTTGCCCGTTCTGCCGAGGAAGTTTGAAGAGAGTAGCCTCAGGGGATCTGTGGGTTCTCACATGCAGTAATGACGTGGTCGACACTCATACTATCATGAAAGAAGATATGTTACGCTTCTATCTTTTCATAAACAACCTACCTGAGGATACACCTGATGTTCTATTCTTAATGTATTATGAGCACTTGTTGTAA

Coding sequence (CDS)

ATGTTGGATTGTTATCAGAGGCTTTCTTCTGGCCATTCTTACAAAGATTTCCTTGAGTTTCTTGAAGCTGATATTCGCCATGCCAATGCTTTTGCAGCTTCATTTCCAAGAGGCAAGGATGGTTCATCCTTCCAGATGAAATTAGTTTGTAACCATTTGACACCAGTGGACTTTGATGGAAGGCCAGATATCTCATCATACAGAAGGAAAGCAACTATAAGTGAATTCTACTCTGTTATATTGCCATCCCTACAACGGCTTTGTGATTATGCATCACAGGTAGATAGCATTGAAGATCCCCACAAGGGAATGGCCATCTCAAAGAGATTAGAACACAAGAGGGAACTTTTAGATTTGGACATAGAAAGAGAAGATGAATGTGGGATCTGTTTGGAGTCGCATACCAAAATTGTCTTGCCACATTGTTGCCATGCCTTGTGCACAAAATGCTACCATGATTGGAAATCGAAATCGGAATCTTGCCCGTTCTGCCGAGGAAGTTTGAAGAGAGTAGCCTCAGGGGATCTGTGGGTTCTCACATGCAGTAATGACGTGGTCGACACTCATACTATCATGAAAGAAGATATGTTACGCTTCTATCTTTTCATAAACAACCTACCTGAGGATACACCTGATGTTCTATTCTTAATGTATTATGAGCACTTGTTGTAA

Protein sequence

MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVCNHLTPVDFDGRPDISSYRRKATISEFYSVILPSLQRLCDYASQVDSIEDPHKGMAISKRLEHKRELLDLDIEREDECGICLESHTKIVLPHCCHALCTKCYHDWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPEDTPDVLFLMYYEHLL
Homology
[Close]
BLAST of ClCG03G003460 vs. TrEMBL
Match: A0A0A0LU99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050110 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 2.4e-112
Identity = 203/253 (80.24%), Postives = 210/253 (83.00%), Query Frame = 1 

Query: 1   MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVCNHLTP----- 60
           MLDCYQRLSSGHSY DFLEFLEADIRHANAFAASFPR KDGSSFQMKLVCNHLTP     
Sbjct: 1   MLDCYQRLSSGHSYNDFLEFLEADIRHANAFAASFPRVKDGSSFQMKLVCNHLTPVILYL 60

Query: 61  -------------------------VDFDGRPDISSYRRKATISEFYSVILPSLQRLCDY 120
                                    VDF GRPDISSY RKATISEFYSVILPSL+RLCDY
Sbjct: 61  LQWVDCFCSFLPLSYFNLFHIVLYKVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDY 120

Query: 121 ASQVDSIEDPHKGMAISKRLEHKRELLDLDIEREDECGICLESHTKIVLPHCCHALCTKC 180
           ASQ++SIED HKGMAISKRLEHKRE LDL+IEREDECGIC ES TKIVLP+CCHA+CT C
Sbjct: 121 ASQIESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNC 180

Query: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPEDT 224
           YHDWKSKSESCPFCRGSLKRVASGDLWVLTC NDVVD  TIMKEDMLRFYLF+NNLPEDT
Sbjct: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDT 240

[Close]
BLAST of ClCG03G003460 vs. TrEMBL
Match: A0A067K427_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11357 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.6e-71
Identity = 140/251 (55.78%), Postives = 171/251 (68.13%), Query Frame = 1 

Query: 5   YQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVCNHLTPVDF------ 64
           Y  L+   SY+D L+ LEADI HAN  AAS PRGKDGS  QMKLV NHL P+        
Sbjct: 3   YYELAERASYQDSLKVLEADIHHANVLAASMPRGKDGSCLQMKLVYNHLAPICLLLLQWM 62

Query: 65  ------------------------DGRPDISSYRRKATISEFYSVILPSLQRLCDYASQV 124
                                   DG+P ISS RRKATI EFY+VILPSLQRL   + ++
Sbjct: 63  DCSCTCLFSSYLNLFHIVLYQVCPDGKPKISSCRRKATIKEFYAVILPSLQRLHGDSMEL 122

Query: 125 DSIEDPHK--GMAISKRLEHKRELLDLDIEREDECGICLESHTKIVLPHCCHALCTKCYH 184
           DS ++      M + +R + +++L D+D+EREDECGICLE  TK+V+P CCH +C  CY 
Sbjct: 123 DSTQEDGYCVEMVVKRRPDDRKKLPDMDLEREDECGICLEPCTKMVVPSCCHTMCINCYR 182

Query: 185 DWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPEDTPD 224
           DW +KSESCPFCRGSLKRV S DLWVLT SNDVVDT T++KEDMLRFYL+IN+LP+D P+
Sbjct: 183 DWSTKSESCPFCRGSLKRVNSSDLWVLTRSNDVVDTKTVLKEDMLRFYLYINSLPKDIPE 242

[Close]
BLAST of ClCG03G003460 vs. TrEMBL
Match: A0A061G5P6_THECC (RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_014560 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.3e-70
Identity = 139/251 (55.38%), Postives = 169/251 (67.33%), Query Frame = 1 

Query: 5   YQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVCNHLTPVDF------ 64
           Y  LS+  SY+D+L+ LEAD++HAN  AAS PR K G+  QMKLV NHL P+        
Sbjct: 3   YFELSASSSYQDYLKVLEADVQHANMLAASIPRAKGGACLQMKLVYNHLAPIFLVFLQWL 62

Query: 65  ------------------------DGRPDISSYRRKATISEFYSVILPSLQRLCDYASQV 124
                                   DGRP ISS RRKATI EFY VILPSLQRL    S++
Sbjct: 63  DCSCSCLLSSYVNLFHIVVYQVCSDGRPSISSCRRKATIREFYCVILPSLQRLHGDLSEL 122

Query: 125 DSI--EDPHKGMAISKRLEHKRELLDLDIEREDECGICLESHTKIVLPHCCHALCTKCYH 184
           D    ED    M + K+L+ KR++ D+++EREDECGICLE   KIVLP+CCHA+C  CY 
Sbjct: 123 DVTPGEDHCFEMVVRKKLDDKRKVTDMELEREDECGICLEPCNKIVLPNCCHAMCINCYR 182

Query: 185 DWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPEDTPD 224
           DW  +SESCPFCRGSLKRV SGDLWVLT S +VV+T T++KEDMLR +L+IN LP+D PD
Sbjct: 183 DWSIRSESCPFCRGSLKRVTSGDLWVLTRSTEVVETQTVLKEDMLRLHLYINRLPKDMPD 242

[Close]
BLAST of ClCG03G003460 vs. TrEMBL
Match: B9I3L5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s09480g PE=4 SV=2)

HSP 1 Score: 270.8 bits (691), Expect = 1.5e-69
Identity = 140/251 (55.78%), Postives = 170/251 (67.73%), Query Frame = 1 

Query: 5   YQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVCNHLTPVDF------ 64
           Y  L++  SYKD L+ LEADI+HAN  AAS PR K GS  QMKLV NHL P+        
Sbjct: 4   YLELAAMSSYKDSLKVLEADIQHANVLAASIPRAKSGSCLQMKLVYNHLAPIFLFLLQWM 63

Query: 65  ------------------------DGRPDISSYRRKATISEFYSVILPSLQRLCDYASQV 124
                                   D +P ISS  RKATI +FY+VILPSLQRL     + 
Sbjct: 64  DCSCTCLLSTYFNLFHIVVYKVCSDRKPKISSCGRKATIRQFYAVILPSLQRLHGDTKEP 123

Query: 125 D-SIEDPH-KGMAISKRLEHKRELLDLDIEREDECGICLESHTKIVLPHCCHALCTKCYH 184
           D + E+ H   M +  RLE +R+  D+D+ REDECGICLE  TK+V+P CCHA+C  CYH
Sbjct: 124 DVTQEEGHFLEMIVKNRLEDRRKRSDVDLLREDECGICLEPCTKMVVPSCCHAMCINCYH 183

Query: 185 DWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPEDTPD 224
           +W ++SESCPFCRGSLKRV S DLWVLTCS+DVVDT+T++KED+LRFYL+INNLP+D PD
Sbjct: 184 EWNTRSESCPFCRGSLKRVNSEDLWVLTCSSDVVDTNTVLKEDILRFYLYINNLPKDIPD 243

[Close]
BLAST of ClCG03G003460 vs. TrEMBL
Match: B9RAN4_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1507440 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 5.7e-69
Identity = 134/251 (53.39%), Postives = 167/251 (66.53%), Query Frame = 1 

Query: 5   YQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVCNHLTPVDF------ 64
           Y  L+    Y+D L+ LEADI+HAN  AAS PRGK GS  QMKL  NHL P+        
Sbjct: 3   YYELAGRFPYQDSLKVLEADIQHANVLAASIPRGKGGSCLQMKLAYNHLAPICLLLLQWM 62

Query: 65  ------------------------DGRPDISSYRRKATISEFYSVILPSLQRLCDYASQV 124
                                   DG+P ISS RRKATI EFY+VILPSLQRL   + ++
Sbjct: 63  DCSCASLLSSFLNLFHIVVYQVCSDGKPKISSCRRKATIREFYAVILPSLQRLHGDSLEL 122

Query: 125 DSIED--PHKGMAISKRLEHKRELLDLDIEREDECGICLESHTKIVLPHCCHALCTKCYH 184
           D  ++   +  M +   LE +R++ D+D++REDECGICLE  TK+V+P CCHA+C  CY 
Sbjct: 123 DITQENGQYVEMVVKMGLEDRRKVSDMDLDREDECGICLEPCTKMVVPSCCHAMCINCYR 182

Query: 185 DWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPEDTPD 224
           DW  +SESCPFCRGSLKRV SGDLWVLTC++DVVDT T++ ED LRFYLFIN+LP+D PD
Sbjct: 183 DWNMRSESCPFCRGSLKRVDSGDLWVLTCNSDVVDTRTVLNEDRLRFYLFINSLPKDVPD 242

[Close]
BLAST of ClCG03G003460 vs. TAIR10
Match: AT1G24440.1 (AT1G24440.1 RING/U-box superfamily protein)

HSP 1 Score: 230.7 bits (587), Expect = 8.7e-61
Identity = 126/243 (51.85%), Postives = 152/243 (62.55%), Query Frame = 1 

Query: 13  SYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVCNHLTP--------VDFD----- 72
           SY+D L+ LEADI HAN  AA  P GK G   QMKLVC++L P        +DF      
Sbjct: 9   SYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWMDFSCLLPR 68

Query: 73  -----------GRPDIS----SYRRKATISEFYSVILPSLQRL-CDYASQVDSIEDPHKG 132
                       R D       Y RKATI EFY VILPSL+RL  ++A   D        
Sbjct: 69  YFDFFHILIYKVRADGRWNRSRYGRKATIREFYGVILPSLERLHINFADLPDESLWYPNP 128

Query: 133 MAISKR---LEHKRELLDLDIEREDECGICLESHTKIVLPHCCHALCTKCYHDWKSKSES 192
            AI+K+   +E  R +  +D+EREDECGICLE  TK+VLP+CCHA+C KCY +W +KSES
Sbjct: 129 KAITKKQYDIEGSRYMNSIDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSES 188

Query: 193 CPFCRGSLKRVASGDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPEDTPDVLFLMYYE 224
           CPFCRGS+KRV S DLWVLTC  DVVD  T+ KED+LRFYL IN+LP+D P+  FL+Y E
Sbjct: 189 CPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLPKDYPEAAFLVYNE 248

[Close]
BLAST of ClCG03G003460 vs. TAIR10
Match: AT1G13195.1 (AT1G13195.1 RING/U-box superfamily protein)

HSP 1 Score: 206.1 bits (523), Expect = 2.3e-53
Identity = 116/250 (46.40%), Postives = 147/250 (58.80%), Query Frame = 1 

Query: 9   SSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVCNH--------LTPVDFDG 68
           SS  SY + L+ LEAD++HAN+ A + P GK+    QMKLV ++        L  +D   
Sbjct: 11  SSSSSYYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSS 70

Query: 69  RPDISSYR----------------------RKATISEFYSVILPSLQRLCDYASQVDSIE 128
              I  Y                       RKATISEFY VILPSLQ L    S +D +E
Sbjct: 71  SCLIPRYLNLFHVLVYKVQSDGQPKLTTHGRKATISEFYGVILPSLQLL---HSNLDELE 130

Query: 129 DPHKGMAISKRLEHK-------RELLDLDIEREDECGICLESHTKIVLPHCCHALCTKCY 188
               G  + KRL  K           +  +ERE+ECGICLE+ TK+VLP+CCH++C KCY
Sbjct: 131 TTDIGFDL-KRLSKKITKEARSSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCY 190

Query: 189 HDWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPEDTP 222
            +W  KS+SCPFCRGS+KRV S DLWVL   NDVVDT T  +ED+ RFYL+IN+LP+D P
Sbjct: 191 RNWNLKSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYP 250

[Close]
BLAST of ClCG03G003460 vs. TAIR10
Match: AT5G58787.1 (AT5G58787.1 RING/U-box superfamily protein)

HSP 1 Score: 158.3 bits (399), Expect = 5.5e-39
Identity = 87/231 (37.66%), Postives = 126/231 (54.55%), Query Frame = 1 

Query: 13  SYKDFLEFLEADIRHANA----------------------------FAASFPRGKDGSSF 72
           S+KD L+ LEADI+HAN                             F   +   K     
Sbjct: 5   SFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKLAGFL 64

Query: 73  QMKLVCNHLTPVDFDGRPDISSYRRKATISEFYSVILPSLQRLCDYASQVDSIEDPHKGM 132
            +  V  ++T  D  G+  +S Y RKA+I EF +VILPSL +L    + +D  +      
Sbjct: 65  GLLRVLIYMTYAD--GKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEV-C 124

Query: 133 AISKRLEHKRELLDLDIEREDECGICLESHTKIVLPHCCHALCTKCYHDWKSKSESCPFC 192
            +  R + + E+ +++IERE+ECGIC+E ++K+VLP+C H+LC KCY DW+ +S+SCPFC
Sbjct: 125 KMRYRKKDESEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFC 184

Query: 193 RGSLKRVASGDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPEDTPDVLF 216
           R SLKRV SGDLW+    ND V+   I +E+  R +++I  LP   PD ++
Sbjct: 185 RDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVY 232

[Close]
BLAST of ClCG03G003460 vs. TAIR10
Match: AT3G47160.2 (AT3G47160.2 RING/U-box superfamily protein)

HSP 1 Score: 151.8 bits (382), Expect = 5.1e-37
Identity = 74/162 (45.68%), Postives = 102/162 (62.96%), Query Frame = 1 

Query: 59  DGRPDISSYRRKATISEFYSVILPSLQRLCDYASQVDSIEDPHKGMAISKRLEHKRE--- 118
           DG+  +S Y RK +I +FY+VI PSL +L      +  ++D  +      R  +K E   
Sbjct: 89  DGKTTMSVYERKTSIKDFYAVIFPSLLQL---ERGITDLDDRKQKEVCKIRYRNKDETEK 148

Query: 119 --LLDLDIEREDECGICLESHTKIVLPHCCHALCTKCYHDWKSKSESCPFCRGSLKRVAS 178
             L ++DIERE+ECGIC+E +  +VLP+C H+LC KCY DW  +SESCPFCR SLKRV S
Sbjct: 149 VKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRDWHGRSESCPFCRDSLKRVNS 208

Query: 179 GDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPEDTPDVLF 216
           GDLW+L   +D V+ +TI +E+  R +++I  LP   PD +F
Sbjct: 209 GDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPDQVF 247

[Close]
BLAST of ClCG03G003460 vs. TAIR10
Match: AT5G01520.1 (AT5G01520.1 RING/U-box superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-36
Identity = 86/237 (36.29%), Postives = 123/237 (51.90%), Query Frame = 1 

Query: 13  SYKDFLEFLEADIRHANAFA---------------ASFPRGKDGSSFQMKLVCNHLT--- 72
           S+KD L+ LEADI+ AN  A                S+        F ++    H     
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGAL 63

Query: 73  --------PVDFDGRPDISSYRRKATISEFYSVILPSLQRLCDYASQVDSIEDPHKGMAI 132
                       DG+  +S + RK +I EFY V+ PSL +L      +  +E+  +    
Sbjct: 64  GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQL---HGGITDVEERKQKEIC 123

Query: 133 SKRLEHKR-----ELLDLDIEREDECGICLESHTKIVLPHCCHALCTKCYHDWKSKSESC 192
            KR   K      ++ ++D+ERE+ECGICLE   K+VLP C H++C  CY +W+++S+SC
Sbjct: 124 DKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSC 183

Query: 193 PFCRGSLKRVASGDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPEDTPDVLFLMY 219
           PFCRGSLKRV SGDLW+ TCS ++ D   I KE++ R  ++I+ LP  T D   + Y
Sbjct: 184 PFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 237

[Close]
BLAST of ClCG03G003460 vs. NCBI nr
Match: gi|778658002|ref|XP_011651953.1| (PREDICTED: RING-H2 finger protein ATL47-like [Cucumis sativus])

HSP 1 Score: 412.9 bits (1060), Expect = 3.5e-112
Identity = 203/253 (80.24%), Postives = 210/253 (83.00%), Query Frame = 1 

Query: 1   MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVCNHLTP----- 60
           MLDCYQRLSSGHSY DFLEFLEADIRHANAFAASFPR KDGSSFQMKLVCNHLTP     
Sbjct: 1   MLDCYQRLSSGHSYNDFLEFLEADIRHANAFAASFPRVKDGSSFQMKLVCNHLTPVILYL 60

Query: 61  -------------------------VDFDGRPDISSYRRKATISEFYSVILPSLQRLCDY 120
                                    VDF GRPDISSY RKATISEFYSVILPSL+RLCDY
Sbjct: 61  LQWVDCFCSFLPLSYFNLFHIVLYKVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDY 120

Query: 121 ASQVDSIEDPHKGMAISKRLEHKRELLDLDIEREDECGICLESHTKIVLPHCCHALCTKC 180
           ASQ++SIED HKGMAISKRLEHKRE LDL+IEREDECGIC ES TKIVLP+CCHA+CT C
Sbjct: 121 ASQIESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNC 180

Query: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPEDT 224
           YHDWKSKSESCPFCRGSLKRVASGDLWVLTC NDVVD  TIMKEDMLRFYLF+NNLPEDT
Sbjct: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDT 240

[Close]
BLAST of ClCG03G003460 vs. NCBI nr
Match: gi|659067407|ref|XP_008439294.1| (PREDICTED: RING-H2 finger protein ATL47-like [Cucumis melo])

HSP 1 Score: 411.0 bits (1055), Expect = 1.3e-111
Identity = 202/253 (79.84%), Postives = 210/253 (83.00%), Query Frame = 1 

Query: 1   MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVCNHLTPV---- 60
           MLDCYQRL SGHSY DFLEFLEADIRHANAFAASFPR KD SSF+MKLVCNHLTPV    
Sbjct: 1   MLDCYQRLFSGHSYNDFLEFLEADIRHANAFAASFPRVKDDSSFRMKLVCNHLTPVILYL 60

Query: 61  --------------------------DFDGRPDISSYRRKATISEFYSVILPSLQRLCDY 120
                                     DF GRPDISSY RKATISEFYSVILPSLQRLCDY
Sbjct: 61  LQWVDCSCSFLSLSYFNLFHIVLYKVDFHGRPDISSYGRKATISEFYSVILPSLQRLCDY 120

Query: 121 ASQVDSIEDPHKGMAISKRLEHKRELLDLDIEREDECGICLESHTKIVLPHCCHALCTKC 180
           ASQV+SIED HKGMAISKRLEHKRE LDL+IEREDECGIC ES TKIVLP+CCHA+CT C
Sbjct: 121 ASQVESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPNCCHAMCTNC 180

Query: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPEDT 224
           YHDWKSKSESCPFCRGSLKRVASGDLWVLTC NDV+DT T++KEDMLRFYLFINNLPEDT
Sbjct: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVIDTCTVIKEDMLRFYLFINNLPEDT 240

[Close]
BLAST of ClCG03G003460 vs. NCBI nr
Match: gi|645268169|ref|XP_008239405.1| (PREDICTED: RING-H2 finger protein ATL47-like [Prunus mume])

HSP 1 Score: 278.5 bits (711), Expect = 1.0e-71
Identity = 142/253 (56.13%), Postives = 174/253 (68.77%), Query Frame = 1 

Query: 1   MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVCNHLTP----- 60
           MLD Y++L++   Y D L+ LEADI+HAN  AAS PR K G+  QMKLV NHL P     
Sbjct: 1   MLDYYEQLAAS-PYNDSLKVLEADIQHANMLAASIPRRKSGTVLQMKLVYNHLAPIFLFL 60

Query: 61  -------------------------VDFDGRPDISSYRRKATISEFYSVILPSLQRLCDY 120
                                    V  DGR +ISS  RKAT+SEFY+VILPSLQRL   
Sbjct: 61  LQWIDCSSSCLLSSYLNLFHIIVYKVRTDGRSNISSCGRKATVSEFYNVILPSLQRLHGD 120

Query: 121 ASQVDSIEDPHKGMAISKRLEHKRELLDLDIEREDECGICLESHTKIVLPHCCHALCTKC 180
           + ++D  ++    MA+ KR E   +L D D+ERE+ECGICLE  TK+VLP+CCHA+C  C
Sbjct: 121 SLEMDITQEEALEMAVRKRYEDNIKLSDADLERENECGICLEPCTKMVLPNCCHAMCINC 180

Query: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPEDT 224
           Y DW ++SESCPFCRGS+KRV SGDLWVLTC +DVVDT T++KEDMLRFYLFIN+LP+D 
Sbjct: 181 YRDWNTRSESCPFCRGSIKRVNSGDLWVLTCGSDVVDTQTVLKEDMLRFYLFINSLPKDL 240

[Close]
BLAST of ClCG03G003460 vs. NCBI nr
Match: gi|802648767|ref|XP_012079916.1| (PREDICTED: peroxisome biogenesis factor 10-like [Jatropha curcas])

HSP 1 Score: 278.1 bits (710), Expect = 1.3e-71
Identity = 142/255 (55.69%), Postives = 175/255 (68.63%), Query Frame = 1 

Query: 1   MLDCYQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVCNHLTPVDF-- 60
           M+D Y+ L+   SY+D L+ LEADI HAN  AAS PRGKDGS  QMKLV NHL P+    
Sbjct: 1   MMDYYE-LAERASYQDSLKVLEADIHHANVLAASMPRGKDGSCLQMKLVYNHLAPICLLL 60

Query: 61  ----------------------------DGRPDISSYRRKATISEFYSVILPSLQRLCDY 120
                                       DG+P ISS RRKATI EFY+VILPSLQRL   
Sbjct: 61  LQWMDCSCTCLFSSYLNLFHIVLYQVCPDGKPKISSCRRKATIKEFYAVILPSLQRLHGD 120

Query: 121 ASQVDSIEDPHK--GMAISKRLEHKRELLDLDIEREDECGICLESHTKIVLPHCCHALCT 180
           + ++DS ++      M + +R + +++L D+D+EREDECGICLE  TK+V+P CCH +C 
Sbjct: 121 SMELDSTQEDGYCVEMVVKRRPDDRKKLPDMDLEREDECGICLEPCTKMVVPSCCHTMCI 180

Query: 181 KCYHDWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPE 224
            CY DW +KSESCPFCRGSLKRV S DLWVLT SNDVVDT T++KEDMLRFYL+IN+LP+
Sbjct: 181 NCYRDWSTKSESCPFCRGSLKRVNSSDLWVLTRSNDVVDTKTVLKEDMLRFYLYINSLPK 240

[Close]
BLAST of ClCG03G003460 vs. NCBI nr
Match: gi|643720717|gb|KDP30981.1| (hypothetical protein JCGZ_11357 [Jatropha curcas])

HSP 1 Score: 277.3 bits (708), Expect = 2.3e-71
Identity = 140/251 (55.78%), Postives = 171/251 (68.13%), Query Frame = 1 

Query: 5   YQRLSSGHSYKDFLEFLEADIRHANAFAASFPRGKDGSSFQMKLVCNHLTPVDF------ 64
           Y  L+   SY+D L+ LEADI HAN  AAS PRGKDGS  QMKLV NHL P+        
Sbjct: 3   YYELAERASYQDSLKVLEADIHHANVLAASMPRGKDGSCLQMKLVYNHLAPICLLLLQWM 62

Query: 65  ------------------------DGRPDISSYRRKATISEFYSVILPSLQRLCDYASQV 124
                                   DG+P ISS RRKATI EFY+VILPSLQRL   + ++
Sbjct: 63  DCSCTCLFSSYLNLFHIVLYQVCPDGKPKISSCRRKATIKEFYAVILPSLQRLHGDSMEL 122

Query: 125 DSIEDPHK--GMAISKRLEHKRELLDLDIEREDECGICLESHTKIVLPHCCHALCTKCYH 184
           DS ++      M + +R + +++L D+D+EREDECGICLE  TK+V+P CCH +C  CY 
Sbjct: 123 DSTQEDGYCVEMVVKRRPDDRKKLPDMDLEREDECGICLEPCTKMVVPSCCHTMCINCYR 182

Query: 185 DWKSKSESCPFCRGSLKRVASGDLWVLTCSNDVVDTHTIMKEDMLRFYLFINNLPEDTPD 224
           DW +KSESCPFCRGSLKRV S DLWVLT SNDVVDT T++KEDMLRFYL+IN+LP+D P+
Sbjct: 183 DWSTKSESCPFCRGSLKRVNSSDLWVLTRSNDVVDTKTVLKEDMLRFYLYINSLPKDIPE 242

The following BLAST results are available for this feature:
BLAST of ClCG03G003460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LU99_CUCSA2.4e-11280.24Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050110 PE=4 SV=1[more]
A0A067K427_JATCU1.6e-7155.78Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11357 PE=4 SV=1[more]
A0A061G5P6_THECC2.3e-7055.38RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_014560 PE=4 SV=1[more]
B9I3L5_POPTR1.5e-6955.78Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s09480g PE=4 SV=2[more]
B9RAN4_RICCO5.7e-6953.39Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1507440 PE=4 SV=1[more]
BLAST of ClCG03G003460 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G24440.18.7e-6151.85 RING/U-box superfamily protein[more]
AT1G13195.12.3e-5346.40 RING/U-box superfamily protein[more]
AT5G58787.15.5e-3937.66 RING/U-box superfamily protein[more]
AT3G47160.25.1e-3745.68 RING/U-box superfamily protein[more]
AT5G01520.11.1e-3636.29 RING/U-box superfamily protein[more]
BLAST of ClCG03G003460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778658002|ref|XP_011651953.1|3.5e-11280.24PREDICTED: RING-H2 finger protein ATL47-like [Cucumis sativus][more]
gi|659067407|ref|XP_008439294.1|1.3e-11179.84PREDICTED: RING-H2 finger protein ATL47-like [Cucumis melo][more]
gi|645268169|ref|XP_008239405.1|1.0e-7156.13PREDICTED: RING-H2 finger protein ATL47-like [Prunus mume][more]
gi|802648767|ref|XP_012079916.1|1.3e-7155.69PREDICTED: peroxisome biogenesis factor 10-like [Jatropha curcas][more]
gi|643720717|gb|KDP30981.1|2.3e-7155.78hypothetical protein JCGZ_11357 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G003460.1ClCG03G003460.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 127..164
score: 0
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 127..165
score: 1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 114..170
score: 3.1
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 142..151
scor
NoneNo IPR availablePANTHERPTHR15315RING FINGER PROTEIN 41, 151coord: 40..223
score: 1.9
NoneNo IPR availablePANTHERPTHR15315:SF32SUBFAMILY NOT NAMEDcoord: 40..223
score: 1.9
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 124..170
score: 1.
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 116..170
score: 1.41