CsGy1G009190 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTGTTACAAGCCAATTAATCGAGACGATCTAGTGGCTAATGTTTTCAAACGAAGGGGCCGTGATTTGTCCGATTTGTCTACAGAAAGGACAAACAAAACCTTTCTTTATTATGAAATGAAAGAAACTTATTCAAGTTAGGTGCTCATTTAATCCCTCAACCACAATATCTGAAGCAACCCAACAAGGAAATTTTGAAAATTTCAAAAGTATTGACTAATGGGTTTTTTGTATTGGATGGCTTGGATAGACAGAGTCATTTCTTCACAGTCTGTAAGTTAGAGGTTTGATTTTTCAAAGAAAGACAGAAGAGAAGACTCAGTCTGGTTCTCTTATAGTTATATAATAGACCATTTCTCCCAGACAAGGCCTCTCTATGGACTGTGGGTTACAGAAAGAAACAATATTCAAATTCTTCTTCTATTTGATCATATTCATCCGTGTGGCGCTTTGGCATTGCATTGACAACAACAATTTCAAACAGAGAGGATGTTGGATTGTTATCAGAGGCTTTCTTCTGGCCATTCTTACAATGATTTCCTTGAGTTTCTTGAAGCTGATATTCGCCATGCCAATGCTTTGTGAGCTTCTCTTTATCTGAATTTTCTTTTATACATTTTTCTATTCTGAGTTCTTTATGGTTGATTGGTTGATGCCATGTCTTTTGGGCTCTTTCTAAAACTTGGTTATAGCATCTTCTGTTGTGGGATTTTGTAACCCATTGCAAAATTTAACACGTTGTAAATTTATTTTTTGAGTTATTGGTGTGAATTGTTTGTTCATGTCCTTTGAAGTTAATGAAAATGCGACTGGTTAGAGTTACCAAGGTTTGCCTTTATAGCGTTCTGGTTTTGGTTCCATACTTGGTGGGTTTGTGCTTTTGAAGAGGAGAAAGGATGCTAAGATTCTCTATACTCTTGATGATGCTTTAAAGAAAGTTATTTGTATCTGTATGAAATGTTATTGCTCAAAAAGAAGACTAAAATAATCGTTTAAAACTTTTTGCGGGTACCCTTCAAATTTTCAGTTACTTCCATCTTAAAATCTCAATAAATTATGATCCCCACAGACGACTTTGGAGTAAGTGAAGCCTCCCTGGAGTTAGTTAGATGGGCTATGAGCATAATGCAAGTAGTTGAGTTCTCGATAACAAAAAAGTTGATCAAAGACAAAAGTCAACAGTTGCTCCCTTCAGTTTCTCAATTGTTCTAGTATAGTTGCATTTGCTGTCATTATAATTAGTTCTGGAGTTTATTTGTAAATTCAAGATATGTTGTGCTCTATCAACTAAAAATGGTAGTTTAAATATGGGAATGAAGCAATTATTTTATATTGAAATATCATTATTATGATGCAGTGCAGCTTCATTTCCAAGAGTTAAGGATGGTTCATCCTTCCAGATGAAATTAGTTTGTAACCATTTGACACCAGTTATTCTTTACTTGCTTCAATGGGTGGATTGCTTCTGTTCCTTTCTACCTTTGAGCTACTTCAACCTATTCCACATAGTTCTGTACAAGGTGAGCAAATTGACTAAAAATACTAAAAGTATTTGATATATAAATTAAATTTACGATAATCCACCTGCTTAAGCCCTTTTTACATTTACTCCTCCAATAAGTTTCAAACTCACAAGTAACAGGGTGTTAGAGTATTTGGTTTAATTAAATTTGCCATAATCCAACAAGTATTTTAGGTTAATCAGTGATTTAAGAAGAAAAATGAAAAAAAGGTAATAGAAGAGAGACGAATAATTGAAGTTTGATGATTCGTGTTAATCAACAGGTGGACTTTCATGGAAGGCCAGATATCTCATCATACGGAAGGAAAGCAACTATAAGCGAATTCTACTGTATGCAATCTATCTCTCTTGCTCCTCTATTTATCTTTGTTGTTTTAAAGTTTTCCGAAGGTGGTGATATGTCAAGCAAAAGATTAAAATGTGTCTTCGTTCTCTGCCACGATTCATACATCAGATGAAAACAATCATCTTCATGTACAATTCTCTTCTGGAAAAGAGTTGTGGCGAACGGTTAAAAATGTGCTTTTGTATTAAACGGCTAAACCAACAAGAACTTCAGTTCTTTCTTACTTCACCGTTTAAAATGATATTAATACTCTTTAACATGAATGCAGCTGTTATATTACCATCCCTACGACGGCTTTGTGATTATGCATCACAGATAGAGAGCATTGAAGATCTCCACAAGGGAATGGCGATCTCAAAAAGATTAGAACACAAGAGGGAATTTTTAGATTTGGAGATAGAAAGAGAAGATGAATGTGGGATCTGTTTCGAGTCGCGTACCAAAATTGTCTTGCCATATTGTTGCCATGCCATGTGCACAAATTGCTACCACGATTGGTATTACTATTGAAAGCTTTACTCTTATATCCATATCTTTGACCCAGTAGATTCTTAATGGCTGAATGTACTATTAGGAAAAAAAAAAAAAACTATAATGCTCCTTTCCCTCATCTATTACAGGAAATCAAAGTCAGAATCTTGCCCATTCTGCCGAGGAAGTTTGAAGAGAGTAGCCTCAGGGGATCTGTGGGTTCTCACATGTGGTAACGACGTGGTTGACCCCCGTACTATTATGAAAGAAGATATGTTACGCTTCTACCTTTTTGTAAACAACCTACCTGAAGATACTCCTGATGTTCTATTCTTAATGGACTATGAACACTTGTTGTAACAAACCAAACGATTAGAATAATGTACATTGGAGGACTTTGCTAATTGTCCACAAATATGGAGGGTTGGTTTTTTTCTGATATCGACCCTCGTTCTGTTTGTCATGTGGAATGTTGCACGAGTTCGTTTGCAGTAATGCAGTTTGTATATGAGGTTCTCTTTTAACATAATATAACAGTACATAAGCTTTGAGTTCTGTTCTTCCATTTCATAATTACATTAAAGAGAAAAGCCACTAGAATAGTTGAATCAAAGTTC CTTTGTTACAAGCCAATTAATCGAGACGATCTAGTGGCTAATGTTTTCAAACGAAGGGGCCGTGATTTGTCCGATTTGTCTACAGAAAGGACAAACAAAACCTTTCTTTATTATGAAATGAAAGAAACTTATTCAAGTTAGGTGCTCATTTAATCCCTCAACCACAATATCTGAAGCAACCCAACAAGGAAATTTTGAAAATTTCAAAAGTATTGACTAATGGGTTTTTTGTATTGGATGGCTTGGATAGACAGAGTCATTTCTTCACAGTCTGTAAGTTAGAGGTTTGATTTTTCAAAGAAAGACAGAAGAGAAGACTCAGTCTGGTTCTCTTATAGTTATATAATAGACCATTTCTCCCAGACAAGGCCTCTCTATGGACTGTGGGTTACAGAAAGAAACAATATTCAAATTCTTCTTCTATTTGATCATATTCATCCGTGTGGCGCTTTGGCATTGCATTGACAACAACAATTTCAAACAGAGAGGATGTTGGATTGTTATCAGAGGCTTTCTTCTGGCCATTCTTACAATGATTTCCTTGAGTTTCTTGAAGCTGATATTCGCCATGCCAATGCTTTAGTTACCAAGGTTTGCCTTTATAGCGTTCTGGTTTTGGTTCCATACTTGGTGGACTTTCATGGAAGGCCAGATATCTCATCATACGGAAGGAAAGCAACTATAAGCGAATTCTACTCTGTTATATTACCATCCCTACGACGGCTTTGTGATTATGCATCACAGATAGAGAGCATTGAAGATCTCCACAAGGGAATGGCGATCTCAAAAAGATTAGAACACAAGAGGGAATTTTTAGATTTGGAGATAGAAAGAGAAGATGAATGTGGGATCTGTTTCGAGTCGCGTACCAAAATTGTCTTGCCATATTGTTGCCATGCCATGTGCACAAATTGCTACCACGATTGGAAATCAAAGTCAGAATCTTGCCCATTCTGCCGAGGAAGTTTGAAGAGAGTAGCCTCAGGGGATCTGTGGGTTCTCACATGTGGTAACGACGTGGTTGACCCCCGTACTATTATGAAAGAAGATATGTTACGCTTCTACCTTTTTGTAAACAACCTACCTGAAGATACTCCTGATGTTCTATTCTTAATGGACTATGAACACTTGTTGTAACAAACCAAACGATTAGAATAATGTACATTGGAGGACTTTGCTAATTGTCCACAAATATGGAGGGTTGGTTTTTTTCTGATATCGACCCTCGTTCTGTTTGTCATGTGGAATGTTGCACGAGTTCGTTTGCAGTAATGCAGTTTGTATATGAGGTTCTCTTTTAACATAATATAACAGTACATAAGCTTTGAGTTCTGTTCTTCCATTTCATAATTACATTAAAGAGAAAAGCCACTAGAATAGTTGAATCAAAGTTC ATGTTGGATTGTTATCAGAGGCTTTCTTCTGGCCATTCTTACAATGATTTCCTTGAGTTTCTTGAAGCTGATATTCGCCATGCCAATGCTTTAGTTACCAAGGTTTGCCTTTATAGCGTTCTGGTTTTGGTTCCATACTTGGTGGACTTTCATGGAAGGCCAGATATCTCATCATACGGAAGGAAAGCAACTATAAGCGAATTCTACTCTGTTATATTACCATCCCTACGACGGCTTTGTGATTATGCATCACAGATAGAGAGCATTGAAGATCTCCACAAGGGAATGGCGATCTCAAAAAGATTAGAACACAAGAGGGAATTTTTAGATTTGGAGATAGAAAGAGAAGATGAATGTGGGATCTGTTTCGAGTCGCGTACCAAAATTGTCTTGCCATATTGTTGCCATGCCATGTGCACAAATTGCTACCACGATTGGAAATCAAAGTCAGAATCTTGCCCATTCTGCCGAGGAAGTTTGAAGAGAGTAGCCTCAGGGGATCTGTGGGTTCTCACATGTGGTAACGACGTGGTTGACCCCCGTACTATTATGAAAGAAGATATGTTACGCTTCTACCTTTTTGTAAACAACCTACCTGAAGATACTCCTGATGTTCTATTCTTAATGGACTATGAACACTTGTTGTAA MLDCYQRLSSGHSYNDFLEFLEADIRHANALVTKVCLYSVLVLVPYLVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDYASQIESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNCYHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDTPDVLFLMDYEHLL
BLAST of CsGy1G009190 vs. NCBI nr
Match: XP_011651953.1 (PREDICTED: RING-H2 finger protein ATL47-like [Cucumis sativus] >KGN64372.1 hypothetical protein Csa_1G050110 [Cucumis sativus]) HSP 1 Score: 409.1 bits (1050), Expect = 9.5e-111 Identity = 204/253 (80.63%), Postives = 208/253 (82.21%), Query Frame = 0
BLAST of CsGy1G009190 vs. NCBI nr
Match: XP_016901782.1 (PREDICTED: RING-H2 finger protein ATL47-like [Cucumis melo]) HSP 1 Score: 389.0 bits (998), Expect = 1.0e-104 Identity = 193/253 (76.28%), Postives = 203/253 (80.24%), Query Frame = 0
BLAST of CsGy1G009190 vs. NCBI nr
Match: XP_022137104.1 (uncharacterized protein LOC111008662 [Momordica charantia]) HSP 1 Score: 338.6 bits (867), Expect = 1.6e-89 Identity = 169/253 (66.80%), Postives = 187/253 (73.91%), Query Frame = 0
BLAST of CsGy1G009190 vs. NCBI nr
Match: PON45643.1 (Cdk-activating kinase assembly factor [Parasponia andersonii]) HSP 1 Score: 252.7 bits (644), Expect = 1.1e-63 Identity = 137/252 (54.37%), Postives = 163/252 (64.68%), Query Frame = 0
BLAST of CsGy1G009190 vs. NCBI nr
Match: GAV63623.1 (zf-C3HC4_2 domain-containing protein [Cephalotus follicularis]) HSP 1 Score: 251.9 bits (642), Expect = 1.9e-63 Identity = 131/255 (51.37%), Postives = 166/255 (65.10%), Query Frame = 0
BLAST of CsGy1G009190 vs. TAIR10
Match: AT1G24440.1 (RING/U-box superfamily protein) HSP 1 Score: 206.5 bits (524), Expect = 1.7e-53 Identity = 113/243 (46.50%), Postives = 142/243 (58.44%), Query Frame = 0
BLAST of CsGy1G009190 vs. TAIR10
Match: AT1G13195.1 (RING/U-box superfamily protein) HSP 1 Score: 191.8 bits (486), Expect = 4.3e-49 Identity = 92/180 (51.11%), Postives = 125/180 (69.44%), Query Frame = 0
BLAST of CsGy1G009190 vs. TAIR10
Match: AT5G58787.1 (RING/U-box superfamily protein) HSP 1 Score: 152.9 bits (385), Expect = 2.2e-37 Identity = 85/229 (37.12%), Postives = 124/229 (54.15%), Query Frame = 0
BLAST of CsGy1G009190 vs. TAIR10
Match: AT5G01520.1 (RING/U-box superfamily protein) HSP 1 Score: 152.1 bits (383), Expect = 3.8e-37 Identity = 83/231 (35.93%), Postives = 124/231 (53.68%), Query Frame = 0
BLAST of CsGy1G009190 vs. TAIR10
Match: AT3G47160.2 (RING/U-box superfamily protein) HSP 1 Score: 142.1 bits (357), Expect = 3.9e-34 Identity = 71/173 (41.04%), Postives = 103/173 (59.54%), Query Frame = 0
BLAST of CsGy1G009190 vs. Swiss-Prot
Match: sp|Q9M022|AIRP2_ARATH (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 6.8e-36 Identity = 83/231 (35.93%), Postives = 124/231 (53.68%), Query Frame = 0
BLAST of CsGy1G009190 vs. TrEMBL
Match: tr|A0A0A0LU99|A0A0A0LU99_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050110 PE=4 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 6.3e-111 Identity = 204/253 (80.63%), Postives = 208/253 (82.21%), Query Frame = 0
BLAST of CsGy1G009190 vs. TrEMBL
Match: tr|A0A1S4E0L5|A0A1S4E0L5_CUCME (RING-H2 finger protein ATL47-like OS=Cucumis melo OX=3656 GN=LOC103484120 PE=4 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 6.7e-105 Identity = 193/253 (76.28%), Postives = 203/253 (80.24%), Query Frame = 0
BLAST of CsGy1G009190 vs. TrEMBL
Match: tr|A0A2P5BA24|A0A2P5BA24_PARAD (Cdk-activating kinase assembly factor OS=Parasponia andersonii OX=3476 GN=PanWU01x14_257540 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 7.5e-64 Identity = 137/252 (54.37%), Postives = 163/252 (64.68%), Query Frame = 0
BLAST of CsGy1G009190 vs. TrEMBL
Match: tr|A0A1Q3B774|A0A1Q3B774_CEPFO (Zf-C3HC4_2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_07141 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.3e-63 Identity = 131/255 (51.37%), Postives = 166/255 (65.10%), Query Frame = 0
BLAST of CsGy1G009190 vs. TrEMBL
Match: tr|A0A251P937|A0A251P937_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G157700 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.2e-63 Identity = 128/253 (50.59%), Postives = 167/253 (66.01%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |