CsGy1G009190 (gene) Cucumber (Gy14) v2

NameCsGy1G009190
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionRING-H2 finger protein ATL47-like
LocationChr1 : 5738360 .. 5741315 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTGTTACAAGCCAATTAATCGAGACGATCTAGTGGCTAATGTTTTCAAACGAAGGGGCCGTGATTTGTCCGATTTGTCTACAGAAAGGACAAACAAAACCTTTCTTTATTATGAAATGAAAGAAACTTATTCAAGTTAGGTGCTCATTTAATCCCTCAACCACAATATCTGAAGCAACCCAACAAGGAAATTTTGAAAATTTCAAAAGTATTGACTAATGGGTTTTTTGTATTGGATGGCTTGGATAGACAGAGTCATTTCTTCACAGTCTGTAAGTTAGAGGTTTGATTTTTCAAAGAAAGACAGAAGAGAAGACTCAGTCTGGTTCTCTTATAGTTATATAATAGACCATTTCTCCCAGACAAGGCCTCTCTATGGACTGTGGGTTACAGAAAGAAACAATATTCAAATTCTTCTTCTATTTGATCATATTCATCCGTGTGGCGCTTTGGCATTGCATTGACAACAACAATTTCAAACAGAGAGGATGTTGGATTGTTATCAGAGGCTTTCTTCTGGCCATTCTTACAATGATTTCCTTGAGTTTCTTGAAGCTGATATTCGCCATGCCAATGCTTTGTGAGCTTCTCTTTATCTGAATTTTCTTTTATACATTTTTCTATTCTGAGTTCTTTATGGTTGATTGGTTGATGCCATGTCTTTTGGGCTCTTTCTAAAACTTGGTTATAGCATCTTCTGTTGTGGGATTTTGTAACCCATTGCAAAATTTAACACGTTGTAAATTTATTTTTTGAGTTATTGGTGTGAATTGTTTGTTCATGTCCTTTGAAGTTAATGAAAATGCGACTGGTTAGAGTTACCAAGGTTTGCCTTTATAGCGTTCTGGTTTTGGTTCCATACTTGGTGGGTTTGTGCTTTTGAAGAGGAGAAAGGATGCTAAGATTCTCTATACTCTTGATGATGCTTTAAAGAAAGTTATTTGTATCTGTATGAAATGTTATTGCTCAAAAAGAAGACTAAAATAATCGTTTAAAACTTTTTGCGGGTACCCTTCAAATTTTCAGTTACTTCCATCTTAAAATCTCAATAAATTATGATCCCCACAGACGACTTTGGAGTAAGTGAAGCCTCCCTGGAGTTAGTTAGATGGGCTATGAGCATAATGCAAGTAGTTGAGTTCTCGATAACAAAAAAGTTGATCAAAGACAAAAGTCAACAGTTGCTCCCTTCAGTTTCTCAATTGTTCTAGTATAGTTGCATTTGCTGTCATTATAATTAGTTCTGGAGTTTATTTGTAAATTCAAGATATGTTGTGCTCTATCAACTAAAAATGGTAGTTTAAATATGGGAATGAAGCAATTATTTTATATTGAAATATCATTATTATGATGCAGTGCAGCTTCATTTCCAAGAGTTAAGGATGGTTCATCCTTCCAGATGAAATTAGTTTGTAACCATTTGACACCAGTTATTCTTTACTTGCTTCAATGGGTGGATTGCTTCTGTTCCTTTCTACCTTTGAGCTACTTCAACCTATTCCACATAGTTCTGTACAAGGTGAGCAAATTGACTAAAAATACTAAAAGTATTTGATATATAAATTAAATTTACGATAATCCACCTGCTTAAGCCCTTTTTACATTTACTCCTCCAATAAGTTTCAAACTCACAAGTAACAGGGTGTTAGAGTATTTGGTTTAATTAAATTTGCCATAATCCAACAAGTATTTTAGGTTAATCAGTGATTTAAGAAGAAAAATGAAAAAAAGGTAATAGAAGAGAGACGAATAATTGAAGTTTGATGATTCGTGTTAATCAACAGGTGGACTTTCATGGAAGGCCAGATATCTCATCATACGGAAGGAAAGCAACTATAAGCGAATTCTACTGTATGCAATCTATCTCTCTTGCTCCTCTATTTATCTTTGTTGTTTTAAAGTTTTCCGAAGGTGGTGATATGTCAAGCAAAAGATTAAAATGTGTCTTCGTTCTCTGCCACGATTCATACATCAGATGAAAACAATCATCTTCATGTACAATTCTCTTCTGGAAAAGAGTTGTGGCGAACGGTTAAAAATGTGCTTTTGTATTAAACGGCTAAACCAACAAGAACTTCAGTTCTTTCTTACTTCACCGTTTAAAATGATATTAATACTCTTTAACATGAATGCAGCTGTTATATTACCATCCCTACGACGGCTTTGTGATTATGCATCACAGATAGAGAGCATTGAAGATCTCCACAAGGGAATGGCGATCTCAAAAAGATTAGAACACAAGAGGGAATTTTTAGATTTGGAGATAGAAAGAGAAGATGAATGTGGGATCTGTTTCGAGTCGCGTACCAAAATTGTCTTGCCATATTGTTGCCATGCCATGTGCACAAATTGCTACCACGATTGGTATTACTATTGAAAGCTTTACTCTTATATCCATATCTTTGACCCAGTAGATTCTTAATGGCTGAATGTACTATTAGGAAAAAAAAAAAAAACTATAATGCTCCTTTCCCTCATCTATTACAGGAAATCAAAGTCAGAATCTTGCCCATTCTGCCGAGGAAGTTTGAAGAGAGTAGCCTCAGGGGATCTGTGGGTTCTCACATGTGGTAACGACGTGGTTGACCCCCGTACTATTATGAAAGAAGATATGTTACGCTTCTACCTTTTTGTAAACAACCTACCTGAAGATACTCCTGATGTTCTATTCTTAATGGACTATGAACACTTGTTGTAACAAACCAAACGATTAGAATAATGTACATTGGAGGACTTTGCTAATTGTCCACAAATATGGAGGGTTGGTTTTTTTCTGATATCGACCCTCGTTCTGTTTGTCATGTGGAATGTTGCACGAGTTCGTTTGCAGTAATGCAGTTTGTATATGAGGTTCTCTTTTAACATAATATAACAGTACATAAGCTTTGAGTTCTGTTCTTCCATTTCATAATTACATTAAAGAGAAAAGCCACTAGAATAGTTGAATCAAAGTTC

mRNA sequence

CTTTGTTACAAGCCAATTAATCGAGACGATCTAGTGGCTAATGTTTTCAAACGAAGGGGCCGTGATTTGTCCGATTTGTCTACAGAAAGGACAAACAAAACCTTTCTTTATTATGAAATGAAAGAAACTTATTCAAGTTAGGTGCTCATTTAATCCCTCAACCACAATATCTGAAGCAACCCAACAAGGAAATTTTGAAAATTTCAAAAGTATTGACTAATGGGTTTTTTGTATTGGATGGCTTGGATAGACAGAGTCATTTCTTCACAGTCTGTAAGTTAGAGGTTTGATTTTTCAAAGAAAGACAGAAGAGAAGACTCAGTCTGGTTCTCTTATAGTTATATAATAGACCATTTCTCCCAGACAAGGCCTCTCTATGGACTGTGGGTTACAGAAAGAAACAATATTCAAATTCTTCTTCTATTTGATCATATTCATCCGTGTGGCGCTTTGGCATTGCATTGACAACAACAATTTCAAACAGAGAGGATGTTGGATTGTTATCAGAGGCTTTCTTCTGGCCATTCTTACAATGATTTCCTTGAGTTTCTTGAAGCTGATATTCGCCATGCCAATGCTTTAGTTACCAAGGTTTGCCTTTATAGCGTTCTGGTTTTGGTTCCATACTTGGTGGACTTTCATGGAAGGCCAGATATCTCATCATACGGAAGGAAAGCAACTATAAGCGAATTCTACTCTGTTATATTACCATCCCTACGACGGCTTTGTGATTATGCATCACAGATAGAGAGCATTGAAGATCTCCACAAGGGAATGGCGATCTCAAAAAGATTAGAACACAAGAGGGAATTTTTAGATTTGGAGATAGAAAGAGAAGATGAATGTGGGATCTGTTTCGAGTCGCGTACCAAAATTGTCTTGCCATATTGTTGCCATGCCATGTGCACAAATTGCTACCACGATTGGAAATCAAAGTCAGAATCTTGCCCATTCTGCCGAGGAAGTTTGAAGAGAGTAGCCTCAGGGGATCTGTGGGTTCTCACATGTGGTAACGACGTGGTTGACCCCCGTACTATTATGAAAGAAGATATGTTACGCTTCTACCTTTTTGTAAACAACCTACCTGAAGATACTCCTGATGTTCTATTCTTAATGGACTATGAACACTTGTTGTAACAAACCAAACGATTAGAATAATGTACATTGGAGGACTTTGCTAATTGTCCACAAATATGGAGGGTTGGTTTTTTTCTGATATCGACCCTCGTTCTGTTTGTCATGTGGAATGTTGCACGAGTTCGTTTGCAGTAATGCAGTTTGTATATGAGGTTCTCTTTTAACATAATATAACAGTACATAAGCTTTGAGTTCTGTTCTTCCATTTCATAATTACATTAAAGAGAAAAGCCACTAGAATAGTTGAATCAAAGTTC

Coding sequence (CDS)

ATGTTGGATTGTTATCAGAGGCTTTCTTCTGGCCATTCTTACAATGATTTCCTTGAGTTTCTTGAAGCTGATATTCGCCATGCCAATGCTTTAGTTACCAAGGTTTGCCTTTATAGCGTTCTGGTTTTGGTTCCATACTTGGTGGACTTTCATGGAAGGCCAGATATCTCATCATACGGAAGGAAAGCAACTATAAGCGAATTCTACTCTGTTATATTACCATCCCTACGACGGCTTTGTGATTATGCATCACAGATAGAGAGCATTGAAGATCTCCACAAGGGAATGGCGATCTCAAAAAGATTAGAACACAAGAGGGAATTTTTAGATTTGGAGATAGAAAGAGAAGATGAATGTGGGATCTGTTTCGAGTCGCGTACCAAAATTGTCTTGCCATATTGTTGCCATGCCATGTGCACAAATTGCTACCACGATTGGAAATCAAAGTCAGAATCTTGCCCATTCTGCCGAGGAAGTTTGAAGAGAGTAGCCTCAGGGGATCTGTGGGTTCTCACATGTGGTAACGACGTGGTTGACCCCCGTACTATTATGAAAGAAGATATGTTACGCTTCTACCTTTTTGTAAACAACCTACCTGAAGATACTCCTGATGTTCTATTCTTAATGGACTATGAACACTTGTTGTAA

Protein sequence

MLDCYQRLSSGHSYNDFLEFLEADIRHANALVTKVCLYSVLVLVPYLVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDYASQIESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNCYHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDTPDVLFLMDYEHLL
BLAST of CsGy1G009190 vs. NCBI nr
Match: XP_011651953.1 (PREDICTED: RING-H2 finger protein ATL47-like [Cucumis sativus] >KGN64372.1 hypothetical protein Csa_1G050110 [Cucumis sativus])

HSP 1 Score: 409.1 bits (1050), Expect = 9.5e-111
Identity = 204/253 (80.63%), Postives = 208/253 (82.21%), Query Frame = 0

Query: 1   MLDCYQRLSSGHSYNDFLEFLEADIRHANAL---------------------VTKVCLY- 60
           MLDCYQRLSSGHSYNDFLEFLEADIRHANA                      +T V LY 
Sbjct: 1   MLDCYQRLSSGHSYNDFLEFLEADIRHANAFAASFPRVKDGSSFQMKLVCNHLTPVILYL 60

Query: 61  ----------------SVLVLVPYLVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDY 120
                           ++  +V Y VDFHGRPDISSYGRKATISEFYSVILPSLRRLCDY
Sbjct: 61  LQWVDCFCSFLPLSYFNLFHIVLYKVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDY 120

Query: 121 ASQIESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNC 180
           ASQIESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNC
Sbjct: 121 ASQIESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNC 180

Query: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDT 216
           YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDT
Sbjct: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDT 240

BLAST of CsGy1G009190 vs. NCBI nr
Match: XP_016901782.1 (PREDICTED: RING-H2 finger protein ATL47-like [Cucumis melo])

HSP 1 Score: 389.0 bits (998), Expect = 1.0e-104
Identity = 193/253 (76.28%), Postives = 203/253 (80.24%), Query Frame = 0

Query: 1   MLDCYQRLSSGHSYNDFLEFLEADIRHANAL---------------------VTKVCLY- 60
           MLDCYQRL SGHSYNDFLEFLEADIRHANA                      +T V LY 
Sbjct: 1   MLDCYQRLFSGHSYNDFLEFLEADIRHANAFAASFPRVKDDSSFRMKLVCNHLTPVILYL 60

Query: 61  ----------------SVLVLVPYLVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDY 120
                           ++  +V Y VDFHGRPDISSYGRKATISEFYSVILPSL+RLCDY
Sbjct: 61  LQWVDCSCSFLSLSYFNLFHIVLYKVDFHGRPDISSYGRKATISEFYSVILPSLQRLCDY 120

Query: 121 ASQIESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNC 180
           ASQ+ESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLP CCHAMCTNC
Sbjct: 121 ASQVESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPNCCHAMCTNC 180

Query: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDT 216
           YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDV+D  T++KEDMLRFYLF+NNLPEDT
Sbjct: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVIDTCTVIKEDMLRFYLFINNLPEDT 240

BLAST of CsGy1G009190 vs. NCBI nr
Match: XP_022137104.1 (uncharacterized protein LOC111008662 [Momordica charantia])

HSP 1 Score: 338.6 bits (867), Expect = 1.6e-89
Identity = 169/253 (66.80%), Postives = 187/253 (73.91%), Query Frame = 0

Query: 1   MLDCYQRLSSGHSYNDFLEFLEADIRHANALVTK--------------VC---------- 60
           MLD YQRLSSG SY DF+EFLEADIRHAN L                 VC          
Sbjct: 1   MLDYYQRLSSGRSYKDFIEFLEADIRHANTLAASFPRGKDGSSFQMKLVCNHLAPVVLYL 60

Query: 61  --------------LYSVLVLVPYLVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDY 120
                          +++  +V Y V   GRPDISS G+KATISEFYSVILPSL+RLCDY
Sbjct: 61  LQWMDCSCSYLSMSYFNLFHIVLYKVHSDGRPDISSCGKKATISEFYSVILPSLQRLCDY 120

Query: 121 ASQIESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNC 180
           ASQ++ IEDL  GMAISKRLEHK++ L+++ EREDECGIC E RTKIVLP+CCHAMCT+C
Sbjct: 121 ASQVDRIEDLRTGMAISKRLEHKKKLLEVDTEREDECGICMEPRTKIVLPHCCHAMCTSC 180

Query: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDT 216
           YHDWKSKSESCPFCRGSLKRVASGDLWVL C NDVVD RT MKEDMLRFYLF+N+LPEDT
Sbjct: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLMCSNDVVDTRTXMKEDMLRFYLFINSLPEDT 240

BLAST of CsGy1G009190 vs. NCBI nr
Match: PON45643.1 (Cdk-activating kinase assembly factor [Parasponia andersonii])

HSP 1 Score: 252.7 bits (644), Expect = 1.1e-63
Identity = 137/252 (54.37%), Postives = 163/252 (64.68%), Query Frame = 0

Query: 1   MLDCYQRLSSGHSYNDFLEFLEADIRHANALVTKV-------CLYSVLV----------- 60
           ML CYQ+L++G SY D L+ LEADI HAN L   +       CL   LV           
Sbjct: 1   MLGCYQQLAAGPSYQDSLKILEADIHHANMLAASIPRGKGGTCLQMKLVYNELAPIFMVL 60

Query: 61  -----------LVPYLVDFH---------GRPDISSYGRKATISEFYSVILPSLRRLCDY 120
                      L  YL  FH         GRP+ SSYGRKATISEFYSVILPSL+ L   
Sbjct: 61  LQWIDCSCPCLLSSYLNLFHVVVHQMRSDGRPNNSSYGRKATISEFYSVILPSLQCLHGD 120

Query: 121 ASQIESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNC 180
            S+ E   +L   M + KR E K+ F D + E EDECGIC E+ TK+VLP CCHAMC NC
Sbjct: 121 LSEHEKSHNLE--MVVRKRHEDKKLF-DADSEWEDECGICLENCTKMVLPNCCHAMCINC 180

Query: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDT 215
           YHDW ++SESCPFCRGSLKRV S DLWVLTCGNDVVD +T +K+D+LRF+LF++NLP+D 
Sbjct: 181 YHDWNTRSESCPFCRGSLKRVNSEDLWVLTCGNDVVDTKTALKDDVLRFFLFIDNLPKDI 240

BLAST of CsGy1G009190 vs. NCBI nr
Match: GAV63623.1 (zf-C3HC4_2 domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 251.9 bits (642), Expect = 1.9e-63
Identity = 131/255 (51.37%), Postives = 166/255 (65.10%), Query Frame = 0

Query: 1   MLDCYQRLSSGHSYNDFLEFLEADIRHANALVTKV-------CLYSVLV----------- 60
           M+D Y+ L    SY D L+ LEADI+HAN L   +       CL   LV           
Sbjct: 1   MMDYYE-LDVRSSYQDSLKVLEADIQHANMLAASIPRGKGGSCLQMKLVYNHLAPIFLFL 60

Query: 61  --------------------LVPYLVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDY 120
                               +V Y V   GRP++SSYGRKATI EFY+VILPSL+RL   
Sbjct: 61  LQCLDCSCTCLLSSYLNLYHIVVYKVCSDGRPNVSSYGRKATIREFYTVILPSLQRLHCN 120

Query: 121 ASQIE--SIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCT 180
           +S+++    ED    M + KRLE K +  D++++REDECGIC E  TK+VLP CCH+MC 
Sbjct: 121 SSELDITQEEDHSFQMVVRKRLEDKSKLSDVDMDREDECGICLEPCTKMVLPNCCHSMCI 180

Query: 181 NCYHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPE 216
           NCYHDW ++SESCPFCRGSLKRV S DLWVLTCG+DVVD +T++KEDMLRFYL++N+LP+
Sbjct: 181 NCYHDWNTRSESCPFCRGSLKRVNSEDLWVLTCGHDVVDTQTVLKEDMLRFYLYINSLPK 240

BLAST of CsGy1G009190 vs. TAIR10
Match: AT1G24440.1 (RING/U-box superfamily protein)

HSP 1 Score: 206.5 bits (524), Expect = 1.7e-53
Identity = 113/243 (46.50%), Postives = 142/243 (58.44%), Query Frame = 0

Query: 13  SYNDFLEFLEADIRHANALVTKV--------------------------------CL--- 72
           SY D L+ LEADI HAN L  ++                                CL   
Sbjct: 9   SYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWMDFSCLLPR 68

Query: 73  -YSVLVLVPYLVDFHGRPDISSYGRKATISEFYSVILPSLRRL-CDYASQIESIEDLHKG 132
            +    ++ Y V   GR + S YGRKATI EFY VILPSL RL  ++A   +        
Sbjct: 69  YFDFFHILIYKVRADGRWNRSRYGRKATIREFYGVILPSLERLHINFADLPDESLWYPNP 128

Query: 133 MAISKR---LEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNCYHDWKSKSES 192
            AI+K+   +E  R    +++EREDECGIC E  TK+VLP CCHAMC  CY +W +KSES
Sbjct: 129 KAITKKQYDIEGSRYMNSIDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSES 188

Query: 193 CPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDTPDVLFLMDYE 216
           CPFCRGS+KRV S DLWVLTC  DVVDP T+ KED+LRFYL +N+LP+D P+  FL+  E
Sbjct: 189 CPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLPKDYPEAAFLVYNE 248

BLAST of CsGy1G009190 vs. TAIR10
Match: AT1G13195.1 (RING/U-box superfamily protein)

HSP 1 Score: 191.8 bits (486), Expect = 4.3e-49
Identity = 92/180 (51.11%), Postives = 125/180 (69.44%), Query Frame = 0

Query: 37  LYSVLVLVPYLVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDYASQIESIEDLHKGM 96
           L+ VLV   Y V   G+P ++++GRKATISEFY VILPSL+ L     ++E+ +      
Sbjct: 80  LFHVLV---YKVQSDGQPKLTTHGRKATISEFYGVILPSLQLLHSNLDELETTDIGFDLK 139

Query: 97  AISKRL---EHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNCYHDWKSKSESC 156
            +SK++        F +  +ERE+ECGIC E+ TK+VLP CCH+MC  CY +W  KS+SC
Sbjct: 140 RLSKKITKEARSSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSC 199

Query: 157 PFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDTPDVLFLMDYEH 214
           PFCRGS+KRV S DLWVL   NDVVD RT  +ED+ RFYL++N+LP+D P+ LF++ YE+
Sbjct: 200 PFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVYYEY 256

BLAST of CsGy1G009190 vs. TAIR10
Match: AT5G58787.1 (RING/U-box superfamily protein)

HSP 1 Score: 152.9 bits (385), Expect = 2.2e-37
Identity = 85/229 (37.12%), Postives = 124/229 (54.15%), Query Frame = 0

Query: 13  SYNDFLEFLEADIRHANAL------------VTKVCLYS--------------------- 72
           S+ D L+ LEADI+HAN L            V     YS                     
Sbjct: 5   SFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKLAGFL 64

Query: 73  -VLVLVPYLVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDYASQIESIEDLHKGMAI 132
            +L ++ Y+    G+  +S Y RKA+I EF +VILPSL +L    + I+  +   +   +
Sbjct: 65  GLLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQ-KEVCKM 124

Query: 133 SKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNCYHDWKSKSESCPFCRG 192
             R + + E  ++EIERE+ECGIC E  +K+VLP C H++C  CY DW+ +S+SCPFCR 
Sbjct: 125 RYRKKDESEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFCRD 184

Query: 193 SLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDTPDVLF 208
           SLKRV SGDLW+    ND V+   I +E+  R ++++  LP   PD ++
Sbjct: 185 SLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVY 232

BLAST of CsGy1G009190 vs. TAIR10
Match: AT5G01520.1 (RING/U-box superfamily protein)

HSP 1 Score: 152.1 bits (383), Expect = 3.8e-37
Identity = 83/231 (35.93%), Postives = 124/231 (53.68%), Query Frame = 0

Query: 13  SYNDFLEFLEADIRHANALVTKV------------------------------CLYS--- 72
           S+ D L+ LEADI+ AN L ++                               C ++   
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGAL 63

Query: 73  -VLVLVPYLVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDYASQIESIEDLHKGMAI 132
            +L ++ Y     G+  +S + RK +I EFY V+ PSL +L      I  +E+  +    
Sbjct: 64  GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQL---HGGITDVEERKQKEIC 123

Query: 133 SKRLE-----HKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNCYHDWKSKSESC 192
            KR        K +  ++++ERE+ECGIC E R K+VLP C H+MC NCY +W+++S+SC
Sbjct: 124 DKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSC 183

Query: 193 PFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDTPD 205
           PFCRGSLKRV SGDLW+ TC  ++ D   I KE++ R  ++++ LP  T D
Sbjct: 184 PFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSD 231

BLAST of CsGy1G009190 vs. TAIR10
Match: AT3G47160.2 (RING/U-box superfamily protein)

HSP 1 Score: 142.1 bits (357), Expect = 3.9e-34
Identity = 71/173 (41.04%), Postives = 103/173 (59.54%), Query Frame = 0

Query: 40  VLVLVPYLVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDYASQIESIEDLHKGMAIS 99
           +L ++ Y+    G+  +S Y RK +I +FY+VI PSL +L      I  ++D  +     
Sbjct: 78  LLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQL---ERGITDLDDRKQKEVCK 137

Query: 100 KRLEHKRE-----FLDLEIEREDECGICFESRTKIVLPYCCHAMCTNCYHDWKSKSESCP 159
            R  +K E       +++IERE+ECGIC E    +VLP C H++C  CY DW  +SESCP
Sbjct: 138 IRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRDWHGRSESCP 197

Query: 160 FCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDTPDVLF 208
           FCR SLKRV SGDLW+L   +D V+  TI +E+  R ++++  LP   PD +F
Sbjct: 198 FCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPDQVF 247

BLAST of CsGy1G009190 vs. Swiss-Prot
Match: sp|Q9M022|AIRP2_ARATH (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.8e-36
Identity = 83/231 (35.93%), Postives = 124/231 (53.68%), Query Frame = 0

Query: 13  SYNDFLEFLEADIRHANALVTKV------------------------------CLYS--- 72
           S+ D L+ LEADI+ AN L ++                               C ++   
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGAL 63

Query: 73  -VLVLVPYLVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDYASQIESIEDLHKGMAI 132
            +L ++ Y     G+  +S + RK +I EFY V+ PSL +L      I  +E+  +    
Sbjct: 64  GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQL---HGGITDVEERKQKEIC 123

Query: 133 SKRLE-----HKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNCYHDWKSKSESC 192
            KR        K +  ++++ERE+ECGIC E R K+VLP C H+MC NCY +W+++S+SC
Sbjct: 124 DKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSC 183

Query: 193 PFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDTPD 205
           PFCRGSLKRV SGDLW+ TC  ++ D   I KE++ R  ++++ LP  T D
Sbjct: 184 PFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSD 231

BLAST of CsGy1G009190 vs. TrEMBL
Match: tr|A0A0A0LU99|A0A0A0LU99_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050110 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 6.3e-111
Identity = 204/253 (80.63%), Postives = 208/253 (82.21%), Query Frame = 0

Query: 1   MLDCYQRLSSGHSYNDFLEFLEADIRHANAL---------------------VTKVCLY- 60
           MLDCYQRLSSGHSYNDFLEFLEADIRHANA                      +T V LY 
Sbjct: 1   MLDCYQRLSSGHSYNDFLEFLEADIRHANAFAASFPRVKDGSSFQMKLVCNHLTPVILYL 60

Query: 61  ----------------SVLVLVPYLVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDY 120
                           ++  +V Y VDFHGRPDISSYGRKATISEFYSVILPSLRRLCDY
Sbjct: 61  LQWVDCFCSFLPLSYFNLFHIVLYKVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDY 120

Query: 121 ASQIESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNC 180
           ASQIESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNC
Sbjct: 121 ASQIESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNC 180

Query: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDT 216
           YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDT
Sbjct: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDT 240

BLAST of CsGy1G009190 vs. TrEMBL
Match: tr|A0A1S4E0L5|A0A1S4E0L5_CUCME (RING-H2 finger protein ATL47-like OS=Cucumis melo OX=3656 GN=LOC103484120 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 6.7e-105
Identity = 193/253 (76.28%), Postives = 203/253 (80.24%), Query Frame = 0

Query: 1   MLDCYQRLSSGHSYNDFLEFLEADIRHANAL---------------------VTKVCLY- 60
           MLDCYQRL SGHSYNDFLEFLEADIRHANA                      +T V LY 
Sbjct: 1   MLDCYQRLFSGHSYNDFLEFLEADIRHANAFAASFPRVKDDSSFRMKLVCNHLTPVILYL 60

Query: 61  ----------------SVLVLVPYLVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDY 120
                           ++  +V Y VDFHGRPDISSYGRKATISEFYSVILPSL+RLCDY
Sbjct: 61  LQWVDCSCSFLSLSYFNLFHIVLYKVDFHGRPDISSYGRKATISEFYSVILPSLQRLCDY 120

Query: 121 ASQIESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNC 180
           ASQ+ESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLP CCHAMCTNC
Sbjct: 121 ASQVESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPNCCHAMCTNC 180

Query: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDT 216
           YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDV+D  T++KEDMLRFYLF+NNLPEDT
Sbjct: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVIDTCTVIKEDMLRFYLFINNLPEDT 240

BLAST of CsGy1G009190 vs. TrEMBL
Match: tr|A0A2P5BA24|A0A2P5BA24_PARAD (Cdk-activating kinase assembly factor OS=Parasponia andersonii OX=3476 GN=PanWU01x14_257540 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 7.5e-64
Identity = 137/252 (54.37%), Postives = 163/252 (64.68%), Query Frame = 0

Query: 1   MLDCYQRLSSGHSYNDFLEFLEADIRHANALVTKV-------CLYSVLV----------- 60
           ML CYQ+L++G SY D L+ LEADI HAN L   +       CL   LV           
Sbjct: 1   MLGCYQQLAAGPSYQDSLKILEADIHHANMLAASIPRGKGGTCLQMKLVYNELAPIFMVL 60

Query: 61  -----------LVPYLVDFH---------GRPDISSYGRKATISEFYSVILPSLRRLCDY 120
                      L  YL  FH         GRP+ SSYGRKATISEFYSVILPSL+ L   
Sbjct: 61  LQWIDCSCPCLLSSYLNLFHVVVHQMRSDGRPNNSSYGRKATISEFYSVILPSLQCLHGD 120

Query: 121 ASQIESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNC 180
            S+ E   +L   M + KR E K+ F D + E EDECGIC E+ TK+VLP CCHAMC NC
Sbjct: 121 LSEHEKSHNLE--MVVRKRHEDKKLF-DADSEWEDECGICLENCTKMVLPNCCHAMCINC 180

Query: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDT 215
           YHDW ++SESCPFCRGSLKRV S DLWVLTCGNDVVD +T +K+D+LRF+LF++NLP+D 
Sbjct: 181 YHDWNTRSESCPFCRGSLKRVNSEDLWVLTCGNDVVDTKTALKDDVLRFFLFIDNLPKDI 240

BLAST of CsGy1G009190 vs. TrEMBL
Match: tr|A0A1Q3B774|A0A1Q3B774_CEPFO (Zf-C3HC4_2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_07141 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.3e-63
Identity = 131/255 (51.37%), Postives = 166/255 (65.10%), Query Frame = 0

Query: 1   MLDCYQRLSSGHSYNDFLEFLEADIRHANALVTKV-------CLYSVLV----------- 60
           M+D Y+ L    SY D L+ LEADI+HAN L   +       CL   LV           
Sbjct: 1   MMDYYE-LDVRSSYQDSLKVLEADIQHANMLAASIPRGKGGSCLQMKLVYNHLAPIFLFL 60

Query: 61  --------------------LVPYLVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDY 120
                               +V Y V   GRP++SSYGRKATI EFY+VILPSL+RL   
Sbjct: 61  LQCLDCSCTCLLSSYLNLYHIVVYKVCSDGRPNVSSYGRKATIREFYTVILPSLQRLHCN 120

Query: 121 ASQIE--SIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCT 180
           +S+++    ED    M + KRLE K +  D++++REDECGIC E  TK+VLP CCH+MC 
Sbjct: 121 SSELDITQEEDHSFQMVVRKRLEDKSKLSDVDMDREDECGICLEPCTKMVLPNCCHSMCI 180

Query: 181 NCYHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPE 216
           NCYHDW ++SESCPFCRGSLKRV S DLWVLTCG+DVVD +T++KEDMLRFYL++N+LP+
Sbjct: 181 NCYHDWNTRSESCPFCRGSLKRVNSEDLWVLTCGHDVVDTQTVLKEDMLRFYLYINSLPK 240

BLAST of CsGy1G009190 vs. TrEMBL
Match: tr|A0A251P937|A0A251P937_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G157700 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.2e-63
Identity = 128/253 (50.59%), Postives = 167/253 (66.01%), Query Frame = 0

Query: 1   MLDCYQRLSSGHSYNDFLEFLEADIRHANALVTKV------------------------- 60
           MLD Y++L++   YND L+ LEADI+HAN L   +                         
Sbjct: 1   MLDYYEQLAAS-PYNDSLKVLEADIQHANMLAASIPRRKSGTVLQMKLVYNHLAPIFLFL 60

Query: 61  ---------CLYS----VLVLVPYLVDFHGRPDISSYGRKATISEFYSVILPSLRRLCDY 120
                    CL S    +  ++ Y V   GR +ISS GRKAT+SEFY+VILPSL+RL   
Sbjct: 61  LQWIDCSSSCLLSSYLNLFHIIVYKVRTDGRSNISSCGRKATVSEFYNVILPSLQRLHGD 120

Query: 121 ASQIESIEDLHKGMAISKRLEHKREFLDLEIEREDECGICFESRTKIVLPYCCHAMCTNC 180
           + +++  ++    MA+ KR E K +  D+++ERE+ECGIC E  TK+VLP CCHAMC NC
Sbjct: 121 SLEMDITQEEALEMAVRKRYEDKIKLSDVDLERENECGICLEPCTKMVLPNCCHAMCINC 180

Query: 181 YHDWKSKSESCPFCRGSLKRVASGDLWVLTCGNDVVDPRTIMKEDMLRFYLFVNNLPEDT 216
           Y DW ++SESCPFCRGS+KRV SGDLWVLTCG+DVVD +T++KEDMLRFYLF+N+LP+D 
Sbjct: 181 YRDWNTRSESCPFCRGSIKRVNSGDLWVLTCGSDVVDTQTVLKEDMLRFYLFINSLPKDL 240

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011651953.19.5e-11180.63PREDICTED: RING-H2 finger protein ATL47-like [Cucumis sativus] >KGN64372.1 hypot... [more]
XP_016901782.11.0e-10476.28PREDICTED: RING-H2 finger protein ATL47-like [Cucumis melo][more]
XP_022137104.11.6e-8966.80uncharacterized protein LOC111008662 [Momordica charantia][more]
PON45643.11.1e-6354.37Cdk-activating kinase assembly factor [Parasponia andersonii][more]
GAV63623.11.9e-6351.37zf-C3HC4_2 domain-containing protein [Cephalotus follicularis][more]
Match NameE-valueIdentityDescription
AT1G24440.11.7e-5346.50RING/U-box superfamily protein[more]
AT1G13195.14.3e-4951.11RING/U-box superfamily protein[more]
AT5G58787.12.2e-3737.12RING/U-box superfamily protein[more]
AT5G01520.13.8e-3735.93RING/U-box superfamily protein[more]
AT3G47160.23.9e-3441.04RING/U-box superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q9M022|AIRP2_ARATH6.8e-3635.93E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LU99|A0A0A0LU99_CUCSA6.3e-11180.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050110 PE=4 SV=1[more]
tr|A0A1S4E0L5|A0A1S4E0L5_CUCME6.7e-10576.28RING-H2 finger protein ATL47-like OS=Cucumis melo OX=3656 GN=LOC103484120 PE=4 S... [more]
tr|A0A2P5BA24|A0A2P5BA24_PARAD7.5e-6454.37Cdk-activating kinase assembly factor OS=Parasponia andersonii OX=3476 GN=PanWU0... [more]
tr|A0A1Q3B774|A0A1Q3B774_CEPFO1.3e-6351.37Zf-C3HC4_2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_... [more]
tr|A0A251P937|A0A251P937_PRUPE2.2e-6350.59Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G157700 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017907Znf_RING_CS
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G009190.1CsGy1G009190.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 119..156
e-value: 1.9E-4
score: 30.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 119..157
score: 11.545
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 116..162
e-value: 1.1E-8
score: 34.7
NoneNo IPR availablePANTHERPTHR15315:SF35F21J9.10coord: 41..215
NoneNo IPR availablePANTHERPTHR15315RING FINGER PROTEIN 41, 151coord: 41..215
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 108..162
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 91..166
e-value: 1.1E-12
score: 49.1
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 134..143

The following gene(s) are paralogous to this gene:

None