ClCG02G002280 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTCTCCTTCTTCTTCTTCTTCCAGATCCTCTCAAAAACTTCTTAATTCCCCTGTTTCTGATCAAGCCCACAAATTCCAACAGCTTCAAAGTTCCATATTGGTGGTGGTGGATGGCAAAAACCAACAAATACACTTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCTTCTTTCGCCTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCCCATGGCCGCATGCTTGTCCTGACCCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCTCTTTCCCCTCAACCCCTATCTCGACCCCCATCCGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGCGGGATCGCCCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGGCTCCTCCTCCGGCTGTGACGTTTCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGACAGTACGGGAATTATGGGCCTCCGAGCCGGTATGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGGCGGATCTGGTGGCGATAGTGAATCGGCCAAGATCCAGTGGGAATCGTCCGAGTTCTAGTGGATGGTATGTTTCTGTCAAATCCTTGCCCTTTTTACCTTCTCTAAGTCCTTGTCAATTAATTGCGATTATGGAGACATAAACTTGTAGTTGATCATACTTAAAAGTGAAAACTATTTTGGCCCTGCATTTTGGGTATGCAATTGCTTTCTTTGGATGCCCTTTTACCATGACATTGAGATGCTGTTGGGCCTTTGGCTATGGCTTTTTTTTAATTTTACTAGTCTCTCTGTGATGTTTGTGGGCTGTGTAGACATGAATCAATTCATTTTAATCTCATGATTATAGAGTAGATGGATCCTTTTATCTCAATGAATTGGGATTATTGATACAAAAAGGTGTAGGTAATTTAGGCAATGGAAATTGGAATTGCCTTAGTTGGATGCCGTTTTACCATGACACTGAGATGCTGTTGTTTATGGGTTTTGATTTTTATGAGATTCTGTTGATTTTGAAGGGCTCTGTGGAGATGAATCAAGCCATATAATCTCATGAATAAATTATAGAGCAGATGGCTCCTTTTGTTGTTCTCTGTTTTTAGACTGCCGAGTGCTGGCCAATAACATGTAAGGTTCTCTTAGGAAAGAAGAACATTGGCTGCCCGAGTTGTTGCTTTGATAGGAAACATTTTTTAGAATGCAGAATATTTCTATCAGCATGAAGATTTTCAACTTTTGGACTTGTGTTTGATTATTTTCCTTGCATCGTGTCAGCGAGGAAATAGAATATGATATGATTTGGTACCAGCTTGCTTATGACATTGTTATTTAATCGAGTGGTGCTTCATACAGATTTGGGGGTCCAAATATGTGAAACATGGAATCAAGAAGTTTGAGAATGAGATGCCCGTGTTTGAGATATGCGAGATGCTCGAGTTAGATTGTGTATTGGACATTCTCTTCGTGGGCTTTACATTTTCATGGTAGAAAATTATGGATTTTGAAGAGATGATGTGATGAATTATACATCTCCGATATCTCAAACTTTCAAAACAGATGCTCTTGAAAGATTTTTGTGATTCACCGAGCTTACTTGATGATCTATAGATAGGTTGTACAACTGTGTCCTTGACTTATAGAGAATTTGATTCATTTGTTGTGCTAANACAGATTTGGGGGTCCAAATATGTGAAACATGGAATCAAGAAGTTTGAGAATGAGATGCCCGTGTTTGAGATATGCGAGATGCTCGAGTTAGATTGTGTATTGGACATTCTCTTCGTGGGCTTTACATTTTCATGGTAGAAAATTATGGATTTTGAAGAGATGATGTGATGAATTATACATCTCCGATATCTCAAACTTTCAAAACAGATGCTCTTGAAAGATTTTTGTGATTCACCGAGCTTACTTGATGATCTATAGATAGGTTGTACAACTGTGTCCTTGACTTATAGAGAATTTGATTCATTTGTTGTGCTAAAAATTTGTTATTATGGAGGCCATTGAATCTTACCTATAGAATTAGGCCACCTTTTTTAATCCTTAGAAATGGTTGATTAAAATAAATGCATAATGCACAAACACACCCCTCCTCCCCCCCACACACAAACACAGGCAAATATGTTGAACTTGCTTTTGTTTTATTTTAGTAAAAAGGTGTCAATTTGTGTTCTCACTCATTATTATGGTTGGCAACAAATTGTGCTTAAACAGATTCATTCTGAAGTTGGATACTTTTCGAAGGATGAAGATGACATTTGAAGCACAAGCCATGCTGCTCAGCAGCCATCTTTTATCCTTTTGGAATCGGTATTCGTCATCAGAGTTTTTACTTTTTTTAGAAGGCATGGAAGATGAACAGATACCACCAAGGTGACAAGATCTCAACATTGAAGTGACATACTTCAAATTCAGATTGTTATACCCCAAGGAAGTTTCAGCATTCAGTCCCTTTACTGATTGGTAGTTTGGCTTCTTCACCCCCTCTTCTGTATTTATGAAAAGGGAAAGAAGGTCGTTTTGGAATGTAGAACTGACCAGTGTTATGCGTTGTTGTCCTCGTCGTTGTCATTATCGTTTAACTGCTTTTAGATCAGGCTTAGCATCTTCTTGTGTGGAGGATGCTCCTGTGTTTTTCAGTTTCCATCTAAGTTTGTAAAATAAAGATTCTTCTTGTGTGAGGATATTAGGTTTCATTCAGTTTTATAATGAAATGGCCTTTCTAATGAAACTGC TCTTCTCCTTCTTCTTCTTCTTCCAGATCCTCTCAAAAACTTCTTAATTCCCCTGTTTCTGATCAAGCCCACAAATTCCAACAGCTTCAAAGTTCCATATTGGTGGTGGTGGATGGCAAAAACCAACAAATACACTTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCTTCTTTCGCCTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCCCATGGCCGCATGCTTGTCCTGACCCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCTCTTTCCCCTCAACCCCTATCTCGACCCCCATCCGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGCGGGATCGCCCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGGCTCCTCCTCCGGCTGTGACGTTTCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGACAGTACGGGAATTATGGGCCTCCGAGCCGGTATGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGGCGGATCTGGTGGCGATAGTGAATCGGCCAAGATCCAGTGGGAATCGTCCGAGTTCTAGTGGATGATTCATTCTGAAGTTGGATACTTTTCGAAGGATGAAGATGACATTTGAAGCACAAGCCATGCTGCTCAGCAGCCATCTTTTATCCTTTTGGAATCGGTATTCGTCATCAGAGTTTTTACTTTTTTTAGAAGGCATGGAAGATGAACAGATACCACCAAGGTGACAAGATCTCAACATTGAAGTGACATACTTCAAATTCAGATTGTTATACCCCAAGGAAGTTTCAGCATTCAGTCCCTTTACTGATTGGTAGTTTGGCTTCTTCACCCCCTCTTCTGTATTTATGAAAAGGGAAAGAAGGTCGTTTTGGAATGTAGAACTGACCAGTGTTATGCGTTGTTGTCCTCGTCGTTGTCATTATCGTTTAACTGCTTTTAGATCAGGCTTAGCATCTTCTTGTGTGGAGGATGCTCCTGTGTTTTTCAGTTTCCATCTAAGTTTGTAAAATAAAGATTCTTCTTGTGTGAGGATATTAGGTTTCATTCAGTTTTATAATGAAATGGCCTTTCTAATGAAACTGC ATGGCAAAAACCAACAAATACACTTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCTTCTTTCGCCTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCCCATGGCCGCATGCTTGTCCTGACCCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCTCTTTCCCCTCAACCCCTATCTCGACCCCCATCCGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGCGGGATCGCCCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGGCTCCTCCTCCGGCTGTGACGTTTCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGACAGTACGGGAATTATGGGCCTCCGAGCCGGTATGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGGCGGATCTGGTGGCGATAGTGAATCGGCCAAGATCCAGTGGGAATCGTCCGAGTTCTAGTGGATGA MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGGIAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG
BLAST of ClCG02G002280 vs. TrEMBL
Match: A0A0A0K3D7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G039270 PE=4 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 1.1e-112 Identity = 205/229 (89.52%), Postives = 209/229 (91.27%), Query Frame = 1
BLAST of ClCG02G002280 vs. TrEMBL
Match: U5FWS2_POPTR (Proteophosphoglycan-related family protein OS=Populus trichocarpa GN=POPTR_0013s06930g PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 1.1e-54 Identity = 128/248 (51.61%), Postives = 158/248 (63.71%), Query Frame = 1
BLAST of ClCG02G002280 vs. TrEMBL
Match: U5FY13_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s12500g PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 1.1e-54 Identity = 127/242 (52.48%), Postives = 155/242 (64.05%), Query Frame = 1
BLAST of ClCG02G002280 vs. TrEMBL
Match: A0A061E3D2_THECC (Proteophosphoglycan-related, putative OS=Theobroma cacao GN=TCM_008243 PE=4 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 4.0e-54 Identity = 126/235 (53.62%), Postives = 164/235 (69.79%), Query Frame = 1
BLAST of ClCG02G002280 vs. TrEMBL
Match: A9PEK5_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.2e-53 Identity = 126/242 (52.07%), Postives = 154/242 (63.64%), Query Frame = 1
BLAST of ClCG02G002280 vs. TAIR10
Match: AT3G54680.1 (AT3G54680.1 proteophosphoglycan-related) HSP 1 Score: 142.5 bits (358), Expect = 3.2e-34 Identity = 100/235 (42.55%), Postives = 126/235 (53.62%), Query Frame = 1
BLAST of ClCG02G002280 vs. NCBI nr
Match: gi|449453547|ref|XP_004144518.1| (PREDICTED: uncharacterized protein LOC101206223 isoform X1 [Cucumis sativus]) HSP 1 Score: 414.1 bits (1063), Expect = 1.6e-112 Identity = 205/229 (89.52%), Postives = 209/229 (91.27%), Query Frame = 1
BLAST of ClCG02G002280 vs. NCBI nr
Match: gi|700188246|gb|KGN43479.1| (hypothetical protein Csa_7G039270 [Cucumis sativus]) HSP 1 Score: 414.1 bits (1063), Expect = 1.6e-112 Identity = 205/229 (89.52%), Postives = 209/229 (91.27%), Query Frame = 1
BLAST of ClCG02G002280 vs. NCBI nr
Match: gi|659110930|ref|XP_008455486.1| (PREDICTED: uncharacterized protein LOC103495638 isoform X1 [Cucumis melo]) HSP 1 Score: 414.1 bits (1063), Expect = 1.6e-112 Identity = 206/229 (89.96%), Postives = 210/229 (91.70%), Query Frame = 1
BLAST of ClCG02G002280 vs. NCBI nr
Match: gi|1009128535|ref|XP_015881282.1| (PREDICTED: uncharacterized protein LOC107417199 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 246.1 bits (627), Expect = 5.8e-62 Identity = 145/235 (61.70%), Postives = 165/235 (70.21%), Query Frame = 1
BLAST of ClCG02G002280 vs. NCBI nr
Match: gi|1009128533|ref|XP_015881281.1| (PREDICTED: uncharacterized protein LOC107417199 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 246.1 bits (627), Expect = 5.8e-62 Identity = 145/235 (61.70%), Postives = 165/235 (70.21%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |