Lsi11G014020 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G014020
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Proteophosphoglycan-related, putative
Location	chr11 : 22574992 .. 22575756 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAAACCAACAAATACACCTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCCTCTTTCGCTTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCTCATGGCCGCATGCTTGTCCTGACTCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCCCTTTCCCCTCAACCCCAACCTCGACCCCCATCAGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGTGGGATCGTTCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGATTACCCCTCCAGCTGTGGCGTTGCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGGCAGTACGGGAATTATGGGCCTCCGAGCCGGTACGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGACAGATCTGGGGGCGATGGTGAATCGGCCAAGATCCAGTGGGAATCGCCCGAGTTCTAGTGGATGGTATGTTTCTGTCAAATACTCTCTTTTTACTTTCTCTAAGTCCTTGTCAGTTAATGGGGATTATGGAGACATAAACGAGTAG

mRNA sequence

ATGGCAAAAACCAACAAATACACCTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCCTCTTTCGCTTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCTCATGGCCGCATGCTTGTCCTGACTCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCCCTTTCCCCTCAACCCCAACCTCGACCCCCATCAGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGTGGGATCGTTCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGATTACCCCTCCAGCTGTGGCGTTGCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGGCAGTACGGGAATTATGGGCCTCCGAGCCGGTACGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGACAGATCTGGGGGCGATGGTGAATCGGCCAAGATCCAGTGGGAATCGCCCGAGTTCTAGTGGATGGTATGTTTCTGTCAAATACTCTCTTTTTACTTTCTCTAAGTCCTTGTCAGTTAATGGGGATTATGGAGACATAAACGAGTAG

Coding sequence (CDS)

ATGGCAAAAACCAACAAATACACCTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCCTCTTTCGCTTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCTCATGGCCGCATGCTTGTCCTGACTCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCCCTTTCCCCTCAACCCCAACCTCGACCCCCATCAGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGTGGGATCGTTCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGATTACCCCTCCAGCTGTGGCGTTGCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGGCAGTACGGGAATTATGGGCCTCCGAGCCGGTACGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGACAGATCTGGGGGCGATGGTGAATCGGCCAAGATCCAGTGGGAATCGCCCGAGTTCTAGTGGATGGTATGTTTCTGTCAAATACTCTCTTTTTACTTTCTCTAAGTCCTTGTCAGTTAATGGGGATTATGGAGACATAAACGAGTAG

Protein sequence

MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSGWYVSVKYSLFTFSKSLSVNGDYGDINE

Homology

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BLAST of Lsi11G014020 vs. TrEMBL
Match: A0A0A0K3D7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G039270 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.1e-111
Identity = 221/252 (87.70%), Postives = 225/252 (89.29%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTP+PITSP PLSPQPQ RP SADHRPVPD  RPQSDSDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           I PSPIP LEKD+EITPP V LHKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPIPVLEKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSGWYVSVKYSLFT 240
           NYG   RYGEDGRPKSGGGYERMK  GE DLGAMVNRPRSSGNRPSSSGWYVSVKY LF 
Sbjct: 181 NYGSSGRYGEDGRPKSGGGYERMKEVGEADLGAMVNRPRSSGNRPSSSGWYVSVKYLLFL 240

Query: 241 FSKSLSVNGDYG 251
            S S  +N D G
Sbjct: 241 NSMSWLINWDCG 252

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BLAST of Lsi11G014020 vs. TrEMBL
Match: U5FY13_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s12500g PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-47
Identity = 130/246 (52.85%), Postives = 159/246 (64.63%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPN------ 60
           MA+ NKY S+NFNH+YDKN+S NS + NN + NPS   SS+   +T SS +SPN      
Sbjct: 1   MARANKYASVNFNHVYDKNIS-NSTSSNNTNNNPSKHQSSTSFYSTISSPNSPNNLYKSH 60

Query: 61  ------KSHGRMLVLTRPTPKPITS--PPPLSPQPQPRPPSADHRPVPDQTRPQSDSDSI 120
                 ++HGRMLVLTR TPKPI S   PPL+P P+  P       +P QT  + +SD I
Sbjct: 61  LPSSSTRTHGRMLVLTRTTPKPIPSIQTPPLTPSPKTPPAHQAQVQIPVQTEAEPESDRI 120

Query: 121 SLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVG 180
           SLRPLGRTG G I  SP+   EK KE+   +V   K +KFVPPHLR GFVG+EE+P    
Sbjct: 121 SLRPLGRTGAGSIASSPVHGQEKQKEVGS-SVGSPKSDKFVPPHLRPGFVGREEKPGPEV 180

Query: 181 IRSREANQRQYGNY-GPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSS 232
            R +E  QRQ   + G P R+GE+GRPKS GGYE M+   E++LG  VNRP SSGNRP S
Sbjct: 181 FRGKEVGQRQQQQFFGSPDRFGEEGRPKS-GGYEMMRRFDESNLG-FVNRPISSGNRPGS 240

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BLAST of Lsi11G014020 vs. TrEMBL
Match: U5FWS2_POPTR (Proteophosphoglycan-related family protein OS=Populus trichocarpa GN=POPTR_0013s06930g PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.4e-47
Identity = 130/248 (52.42%), Postives = 161/248 (64.92%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNL---SSNSKTGNNPSKNPSSSSSSSFASATYSSISSPN--- 60
           MA+ NKY S+NFNH+YDKN+   SS++ T NNPSK+PSS+S        YS+ISSPN   
Sbjct: 1   MARANKYASVNFNHVYDKNISNSSSSNNTNNNPSKHPSSTS-------FYSTISSPNSPN 60

Query: 61  ------------KSHGRMLVLTRPTPKPITS--PPPLSPQPQPRPPSADHRPVPDQTRPQ 120
                       ++HGRMLVLTRPTPKPI++    PL+P P+  P       +P QT  +
Sbjct: 61  NLYKSHLPSSSPRTHGRMLVLTRPTPKPISTIQTTPLTPSPKTPPGHPAQVQIPVQTGAE 120

Query: 121 SDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEE 180
            + D ISLRPLGRTG G IV SP+   EK KE+   ++   KP+KFVPPHLR GF G+EE
Sbjct: 121 PEQDRISLRPLGRTGVGSIVSSPVRGQEKQKEV-GASLGSPKPDKFVPPHLRPGFAGREE 180

Query: 181 RPVNVGIRSREANQRQYGN-YGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSS 228
           RP     R +E  QRQ    +G P R+GEDGRPKS GGYE M+   E++LG +  RPRSS
Sbjct: 181 RPGPEVFRGKEVGQRQQQQFFGSPGRFGEDGRPKS-GGYETMRRGDESNLGFV--RPRSS 237

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BLAST of Lsi11G014020 vs. TrEMBL
Match: V4U783_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017455mg PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.5e-46
Identity = 131/255 (51.37%), Postives = 165/255 (64.71%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPN------ 60
           MA+TNKYTSINFNH+ +KNL ++    +N      + + ++ AS++YSS++SPN      
Sbjct: 1   MARTNKYTSINFNHVLEKNLPASGTAASN------AGTPTNHASSSYSSVASPNSHLHAA 60

Query: 61  KSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSA-----DHRPVPDQTRPQSDSDSISLR 120
           ++HGRMLVLT+PTPKPI+  PPLSP P     S+          PD  R +  SD ISLR
Sbjct: 61  RTHGRMLVLTKPTPKPISITPPLSPPPASSSSSSAQTQQPQMQTPDLNRTEPGSDQISLR 120

Query: 121 PLGRTGTGGIVPSP-IPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIR 180
           PLGRTG G    SP +   +++KE+        KP KFVPPHLR GFV KEERP    IR
Sbjct: 121 PLGRTGYGSESFSPVVGQQDREKEVGSVVAGSPKPGKFVPPHLRPGFVAKEERPGPDAIR 180

Query: 181 SREANQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG- 240
           +RE+ Q+  G+   P RYGEDGRPKS GGYER++  GE D G M +RPRSSGNRPSSSG 
Sbjct: 181 TRESGQKHSGS---PGRYGEDGRPKS-GGYERLRRGGEPDHGLM-SRPRSSGNRPSSSGS 240

[Close]

BLAST of Lsi11G014020 vs. TrEMBL
Match: A0A067E396_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025469mg PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.5e-46
Identity = 131/255 (51.37%), Postives = 165/255 (64.71%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPN------ 60
           MA+TNKYTSINFNH+ +KNL ++    +N      + + ++ AS++YSS++SPN      
Sbjct: 1   MARTNKYTSINFNHVLEKNLPASGTAASN------AGTPTNHASSSYSSVASPNSHLHAA 60

Query: 61  KSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSA-----DHRPVPDQTRPQSDSDSISLR 120
           ++HGRMLVLT+PTPKPI+  PPLSP P     S+          PD  R +  SD ISLR
Sbjct: 61  RTHGRMLVLTKPTPKPISITPPLSPPPASSSSSSAQTQQPQMQTPDLNRTEPGSDQISLR 120

Query: 121 PLGRTGTGGIVPSP-IPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIR 180
           PLGRTG G    SP +   +++KE+        KP KFVPPHLR GFV KEERP    IR
Sbjct: 121 PLGRTGYGSESFSPVVGQQDREKEVGSVVAGSPKPGKFVPPHLRPGFVAKEERPGPDAIR 180

Query: 181 SREANQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG- 240
           +RE+ Q+  G+   P RYGEDGRPKS GGYER++  GE D G M +RPRSSGNRPSSSG 
Sbjct: 181 TRESGQKHSGS---PGRYGEDGRPKS-GGYERLRRGGEPDHGLM-SRPRSSGNRPSSSGS 240

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BLAST of Lsi11G014020 vs. TAIR10
Match: AT3G54680.1 (AT3G54680.1 proteophosphoglycan-related)

HSP 1 Score: 112.8 bits (281), Expect = 3.0e-25
Identity = 102/235 (43.40%), Postives = 132/235 (56.17%), Query Frame = 1


Query: 5   NKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPNKSHGRMLVLT 64
           NKYTSINFNHI  K+              PSSSSSSS  SA+YSS++   +S+GRMLVLT
Sbjct: 7   NKYTSINFNHILHKD-------------PPSSSSSSS--SASYSSVA---RSNGRMLVLT 66

Query: 65  RPTPKPITSPPPLSPQPQPRPPSADHRPVP-DQTRPQSDSDSISLRPLGRTGTGGIVPSP 124
           + +PKP+ SP          PP +    +P +Q     D   ISLRPLG TG+   +  P
Sbjct: 67  KSSPKPLRSPSAAPTTTTTAPPISTAPRIPSNQAISDPDPSQISLRPLGHTGSSSSLSFP 126

Query: 125 I--PSLEKDKEITPPA-VALH-KPEKFVPPHLRAGFVGKEERPVNVGIRSREAN---QRQ 184
           I  P + K  E+  P  V+L  KP++FVPPHLR GFV K+E+P     R R+ N    ++
Sbjct: 127 IRTPEINKAPEVNAPTPVSLSPKPDRFVPPHLRPGFVRKDEKPGLNSSRVRDPNPNLNQR 186

Query: 185 YGNYGPPSR----YGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG 228
             N   P +    YG+ GRPKS GGYER++    TD       PR +GNRP +SG
Sbjct: 187 LPNQEQPRQEYFGYGQPGRPKS-GGYERIR----TD-------PRITGNRPGTSG 211

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BLAST of Lsi11G014020 vs. NCBI nr
Match: gi|700188246|gb|KGN43479.1| (hypothetical protein Csa_7G039270 [Cucumis sativus])

HSP 1 Score: 411.0 bits (1055), Expect = 1.5e-111
Identity = 221/252 (87.70%), Postives = 225/252 (89.29%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTP+PITSP PLSPQPQ RP SADHRPVPD  RPQSDSDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           I PSPIP LEKD+EITPP V LHKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPIPVLEKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSGWYVSVKYSLFT 240
           NYG   RYGEDGRPKSGGGYERMK  GE DLGAMVNRPRSSGNRPSSSGWYVSVKY LF 
Sbjct: 181 NYGSSGRYGEDGRPKSGGGYERMKEVGEADLGAMVNRPRSSGNRPSSSGWYVSVKYLLFL 240

Query: 241 FSKSLSVNGDYG 251
            S S  +N D G
Sbjct: 241 NSMSWLINWDCG 252

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BLAST of Lsi11G014020 vs. NCBI nr
Match: gi|449453547|ref|XP_004144518.1| (PREDICTED: uncharacterized protein LOC101206223 isoform X1 [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 6.8e-104
Identity = 207/229 (90.39%), Postives = 210/229 (91.70%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTP+PITSP PLSPQPQ RP SADHRPVPD  RPQSDSDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           I PSPIP LEKD+EITPP V LHKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPIPVLEKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG 228
           NYG   RYGEDGRPKSGGGYERMK  GE DLGAMVNRPRSSGNRPSSSG
Sbjct: 181 NYGSSGRYGEDGRPKSGGGYERMKEVGEADLGAMVNRPRSSGNRPSSSG 229

[Close]

BLAST of Lsi11G014020 vs. NCBI nr
Match: gi|659110930|ref|XP_008455486.1| (PREDICTED: uncharacterized protein LOC103495638 isoform X1 [Cucumis melo])

HSP 1 Score: 385.6 bits (989), Expect = 6.8e-104
Identity = 208/229 (90.83%), Postives = 211/229 (92.14%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPITSP  LSPQPQ RP SADHRPVPDQ RPQSDSDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPITSPQVLSPQPQSRPSSADHRPVPDQPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           I PSPI  LEK++EITPP V LHKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPITGLEKNREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG 228
           NYG  SRYGEDGRPKSGGGYERMKG GE DLGAMVNRPRSSGNRPSSSG
Sbjct: 181 NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 229

[Close]

BLAST of Lsi11G014020 vs. NCBI nr
Match: gi|1009128533|ref|XP_015881281.1| (PREDICTED: uncharacterized protein LOC107417199 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 222.2 bits (565), Expect = 1.0e-54
Identity = 145/238 (60.92%), Postives = 170/238 (71.43%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGN--NPSKNPSSSSSSSFASATYSSISSPN-KSH 60
           MAKTN+YT+INFNHIYDKNL +NS   N  NP K  SSSSSSS AS +YS+IS+PN K H
Sbjct: 1   MAKTNRYTTINFNHIYDKNLPNNSNPNNASNPIKT-SSSSSSSLASLSYSAISAPNNKPH 60

Query: 61  GRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRP----VPDQTRPQSDSDSISLRPLGR 120
           GRMLVLTRPT KPI+ PPPLSPQPQ +   + H+P    VPDQ R +  SD+ISLRPLGR
Sbjct: 61  GRMLVLTRPTHKPISIPPPLSPQPQSQ---SSHQPQQNKVPDQDRSEQGSDTISLRPLGR 120

Query: 121 TGTGGIVPSPIPSLEKDKEITPPAVALH-KPEKFVPPHLRAGFVGKEERPVNVGIRSREA 180
           TG G  + S     EK+K      + +  K +KFVPPHLR GFVG+EERP    IR+REA
Sbjct: 121 TGVGSPILSSALGQEKEKHKEHSLLVVSAKTDKFVPPHLRPGFVGREERPGPEVIRTREA 180

Query: 181 NQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSGWYV 231
            Q+   +   P RY +  RPKSGGGYERMK AGE+DLG +  RPRSSGNRPSSSGW +
Sbjct: 181 GQKHIVS---PGRYDDLDRPKSGGGYERMKRAGESDLG-IAGRPRSSGNRPSSSGWLI 230

[Close]

BLAST of Lsi11G014020 vs. NCBI nr
Match: gi|1009128535|ref|XP_015881282.1| (PREDICTED: uncharacterized protein LOC107417199 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 217.2 bits (552), Expect = 3.2e-53
Identity = 144/235 (61.28%), Postives = 168/235 (71.49%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGN--NPSKNPSSSSSSSFASATYSSISSPN-KSH 60
           MAKTN+YT+INFNHIYDKNL +NS   N  NP K  SSSSSSS AS +YS+IS+PN K H
Sbjct: 1   MAKTNRYTTINFNHIYDKNLPNNSNPNNASNPIKT-SSSSSSSLASLSYSAISAPNNKPH 60

Query: 61  GRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRP----VPDQTRPQSDSDSISLRPLGR 120
           GRMLVLTRPT KPI+ PPPLSPQPQ +   + H+P    VPDQ R +  SD+ISLRPLGR
Sbjct: 61  GRMLVLTRPTHKPISIPPPLSPQPQSQ---SSHQPQQNKVPDQDRSEQGSDTISLRPLGR 120

Query: 121 TGTGGIVPSPIPSLEKDKEITPPAVALH-KPEKFVPPHLRAGFVGKEERPVNVGIRSREA 180
           TG G  + S     EK+K      + +  K +KFVPPHLR GFVG+EERP    IR+REA
Sbjct: 121 TGVGSPILSSALGQEKEKHKEHSLLVVSAKTDKFVPPHLRPGFVGREERPGPEVIRTREA 180

Query: 181 NQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG 228
            Q+   +   P RY +  RPKSGGGYERMK AGE+DLG +  RPRSSGNRPSSSG
Sbjct: 181 GQKHIVS---PGRYDDLDRPKSGGGYERMKRAGESDLG-IAGRPRSSGNRPSSSG 227

The following BLAST results are available for this feature:

BLAST of Lsi11G014020 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi11G014020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3D7_CUCSA	1.1e-111	87.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G039270 PE=4 SV=1	[more]
U5FY13_POPTR	1.1e-47	52.85	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s12500g PE=4 SV=1	[more]
U5FWS2_POPTR	5.4e-47	52.42	Proteophosphoglycan-related family protein OS=Populus trichocarpa GN=POPTR_0013s...	[more]
V4U783_9ROSI	4.5e-46	51.37	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017455mg PE=4 SV=1	[more]
A0A067E396_CITSI	4.5e-46	51.37	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025469mg PE=4 SV=1	[more]

BLAST of Lsi11G014020 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54680.1	3.0e-25	43.40	proteophosphoglycan-related	[more]

BLAST of Lsi11G014020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700188246\|gb\|KGN43479.1\|	1.5e-111	87.70	hypothetical protein Csa_7G039270 [Cucumis sativus]	[more]
gi\|449453547\|ref\|XP_004144518.1\|	6.8e-104	90.39	PREDICTED: uncharacterized protein LOC101206223 isoform X1 [Cucumis sativus]	[more]
gi\|659110930\|ref\|XP_008455486.1\|	6.8e-104	90.83	PREDICTED: uncharacterized protein LOC103495638 isoform X1 [Cucumis melo]	[more]
gi\|1009128533\|ref\|XP_015881281.1\|	1.0e-54	60.92	PREDICTED: uncharacterized protein LOC107417199 isoform X1 [Ziziphus jujuba]	[more]
gi\|1009128535\|ref\|XP_015881282.1\|	3.2e-53	61.28	PREDICTED: uncharacterized protein LOC107417199 isoform X2 [Ziziphus jujuba]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003743	translation initiation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G014020.1	Lsi11G014020.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G014020	Csa7G039270	Cucumber (Chinese Long) v2	culsiB494
Lsi11G014020	CSPI07G03280	Wild cucumber (PI 183967)	cpilsiB505
Lsi11G014020	Cucsa.181230	Cucumber (Gy14) v1	cgylsiB303
Lsi11G014020	CmaCh19G008960	Cucurbita maxima (Rimu)	cmalsiB472
Lsi11G014020	CmoCh11G018770	Cucurbita moschata (Rifu)	cmolsiB080
Lsi11G014020	CmoCh19G009130	Cucurbita moschata (Rifu)	cmolsiB457
Lsi11G014020	Cla015634	Watermelon (97103) v1	lsiwmB106
Lsi11G014020	MELO3C018861	Melon (DHL92) v3.5.1	lsimeB095
Lsi11G014020	ClCG02G002280	Watermelon (Charleston Gray)	lsiwcgB097
Lsi11G014020	MELO3C018861.2	Melon (DHL92) v3.6.1	lsimedB101
Lsi11G014020	Cla97C02G028710	Watermelon (97103) v2	lsiwmbB086
Lsi11G014020	Bhi05G001226	Wax gourd	lsiwgoB118
Lsi11G014020	Cp4.1LG04g03760	Cucurbita pepo (Zucchini)	cpelsiB526
Lsi11G014020	Cp4.1LG15g07170	Cucurbita pepo (Zucchini)	cpelsiB199
Lsi11G014020	CsGy7G002920	Cucumber (Gy14) v2	cgyblsiB462
Lsi11G014020	Carg04179	Silver-seed gourd	carlsiB174
Lsi11G014020	Carg18040	Silver-seed gourd	carlsiB974
Lsi11G014020	CsaV3_7G003160	Cucumber (Chinese Long) v3	cuclsiB529

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G014020	Wax gourd	lsiwgoB127
Lsi11G014020	Bottle gourd (USVL1VR-Ls)	lsilsiB022
Lsi11G014020	Cucurbita maxima (Rimu)	cmalsiB091
Lsi11G014020	Cucurbita maxima (Rimu)	cmalsiB513
Lsi11G014020	Cucurbita moschata (Rifu)	cmolsiB499
Lsi11G014020	Cucurbita pepo (Zucchini)	cpelsiB233
Lsi11G014020	Wild cucumber (PI 183967)	cpilsiB099
Lsi11G014020	Wild cucumber (PI 183967)	cpilsiB514
Lsi11G014020	Cucumber (Chinese Long) v2	culsiB099
Lsi11G014020	Melon (DHL92) v3.5.1	lsimeB088
Lsi11G014020	Watermelon (Charleston Gray)	lsiwcgB095
Lsi11G014020	Watermelon (97103) v1	lsiwmB105
Lsi11G014020	Cucumber (Gy14) v2	cgyblsiB092
Lsi11G014020	Melon (DHL92) v3.6.1	lsimedB094
Lsi11G014020	Cucumber (Chinese Long) v3	cuclsiB110