ClCG02G002280 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G002280
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Serine/arginine repetitive matrix protein 2
Location	CG_Chr02 : 2347342 .. 2350306 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCTCCTTCTTCTTCTTCTTCCAGATCCTCTCAAAAACTTCTTAATTCCCCTGTTTCTGATCAAGCCCACAAATTCCAACAGCTTCAAAGTTCCATATTGGTGGTGGTGGATGGCAAAAACCAACAAATACACTTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCTTCTTTCGCCTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCCCATGGCCGCATGCTTGTCCTGACCCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCTCTTTCCCCTCAACCCCTATCTCGACCCCCATCCGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGCGGGATCGCCCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGGCTCCTCCTCCGGCTGTGACGTTTCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGACAGTACGGGAATTATGGGCCTCCGAGCCGGTATGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGGCGGATCTGGTGGCGATAGTGAATCGGCCAAGATCCAGTGGGAATCGTCCGAGTTCTAGTGGATGGTATGTTTCTGTCAAATCCTTGCCCTTTTTACCTTCTCTAAGTCCTTGTCAATTAATTGCGATTATGGAGACATAAACTTGTAGTTGATCATACTTAAAAGTGAAAACTATTTTGGCCCTGCATTTTGGGTATGCAATTGCTTTCTTTGGATGCCCTTTTACCATGACATTGAGATGCTGTTGGGCCTTTGGCTATGGCTTTTTTTTAATTTTACTAGTCTCTCTGTGATGTTTGTGGGCTGTGTAGACATGAATCAATTCATTTTAATCTCATGATTATAGAGTAGATGGATCCTTTTATCTCAATGAATTGGGATTATTGATACAAAAAGGTGTAGGTAATTTAGGCAATGGAAATTGGAATTGCCTTAGTTGGATGCCGTTTTACCATGACACTGAGATGCTGTTGTTTATGGGTTTTGATTTTTATGAGATTCTGTTGATTTTGAAGGGCTCTGTGGAGATGAATCAAGCCATATAATCTCATGAATAAATTATAGAGCAGATGGCTCCTTTTGTTGTTCTCTGTTTTTAGACTGCCGAGTGCTGGCCAATAACATGTAAGGTTCTCTTAGGAAAGAAGAACATTGGCTGCCCGAGTTGTTGCTTTGATAGGAAACATTTTTTAGAATGCAGAATATTTCTATCAGCATGAAGATTTTCAACTTTTGGACTTGTGTTTGATTATTTTCCTTGCATCGTGTCAGCGAGGAAATAGAATATGATATGATTTGGTACCAGCTTGCTTATGACATTGTTATTTAATCGAGTGGTGCTTCATACAGATTTGGGGGTCCAAATATGTGAAACATGGAATCAAGAAGTTTGAGAATGAGATGCCCGTGTTTGAGATATGCGAGATGCTCGAGTTAGATTGTGTATTGGACATTCTCTTCGTGGGCTTTACATTTTCATGGTAGAAAATTATGGATTTTGAAGAGATGATGTGATGAATTATACATCTCCGATATCTCAAACTTTCAAAACAGATGCTCTTGAAAGATTTTTGTGATTCACCGAGCTTACTTGATGATCTATAGATAGGTTGTACAACTGTGTCCTTGACTTATAGAGAATTTGATTCATTTGTTGTGCTAANACAGATTTGGGGGTCCAAATATGTGAAACATGGAATCAAGAAGTTTGAGAATGAGATGCCCGTGTTTGAGATATGCGAGATGCTCGAGTTAGATTGTGTATTGGACATTCTCTTCGTGGGCTTTACATTTTCATGGTAGAAAATTATGGATTTTGAAGAGATGATGTGATGAATTATACATCTCCGATATCTCAAACTTTCAAAACAGATGCTCTTGAAAGATTTTTGTGATTCACCGAGCTTACTTGATGATCTATAGATAGGTTGTACAACTGTGTCCTTGACTTATAGAGAATTTGATTCATTTGTTGTGCTAAAAATTTGTTATTATGGAGGCCATTGAATCTTACCTATAGAATTAGGCCACCTTTTTTAATCCTTAGAAATGGTTGATTAAAATAAATGCATAATGCACAAACACACCCCTCCTCCCCCCCACACACAAACACAGGCAAATATGTTGAACTTGCTTTTGTTTTATTTTAGTAAAAAGGTGTCAATTTGTGTTCTCACTCATTATTATGGTTGGCAACAAATTGTGCTTAAACAGATTCATTCTGAAGTTGGATACTTTTCGAAGGATGAAGATGACATTTGAAGCACAAGCCATGCTGCTCAGCAGCCATCTTTTATCCTTTTGGAATCGGTATTCGTCATCAGAGTTTTTACTTTTTTTAGAAGGCATGGAAGATGAACAGATACCACCAAGGTGACAAGATCTCAACATTGAAGTGACATACTTCAAATTCAGATTGTTATACCCCAAGGAAGTTTCAGCATTCAGTCCCTTTACTGATTGGTAGTTTGGCTTCTTCACCCCCTCTTCTGTATTTATGAAAAGGGAAAGAAGGTCGTTTTGGAATGTAGAACTGACCAGTGTTATGCGTTGTTGTCCTCGTCGTTGTCATTATCGTTTAACTGCTTTTAGATCAGGCTTAGCATCTTCTTGTGTGGAGGATGCTCCTGTGTTTTTCAGTTTCCATCTAAGTTTGTAAAATAAAGATTCTTCTTGTGTGAGGATATTAGGTTTCATTCAGTTTTATAATGAAATGGCCTTTCTAATGAAACTGC

mRNA sequence

TCTTCTCCTTCTTCTTCTTCTTCCAGATCCTCTCAAAAACTTCTTAATTCCCCTGTTTCTGATCAAGCCCACAAATTCCAACAGCTTCAAAGTTCCATATTGGTGGTGGTGGATGGCAAAAACCAACAAATACACTTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCTTCTTTCGCCTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCCCATGGCCGCATGCTTGTCCTGACCCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCTCTTTCCCCTCAACCCCTATCTCGACCCCCATCCGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGCGGGATCGCCCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGGCTCCTCCTCCGGCTGTGACGTTTCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGACAGTACGGGAATTATGGGCCTCCGAGCCGGTATGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGGCGGATCTGGTGGCGATAGTGAATCGGCCAAGATCCAGTGGGAATCGTCCGAGTTCTAGTGGATGATTCATTCTGAAGTTGGATACTTTTCGAAGGATGAAGATGACATTTGAAGCACAAGCCATGCTGCTCAGCAGCCATCTTTTATCCTTTTGGAATCGGTATTCGTCATCAGAGTTTTTACTTTTTTTAGAAGGCATGGAAGATGAACAGATACCACCAAGGTGACAAGATCTCAACATTGAAGTGACATACTTCAAATTCAGATTGTTATACCCCAAGGAAGTTTCAGCATTCAGTCCCTTTACTGATTGGTAGTTTGGCTTCTTCACCCCCTCTTCTGTATTTATGAAAAGGGAAAGAAGGTCGTTTTGGAATGTAGAACTGACCAGTGTTATGCGTTGTTGTCCTCGTCGTTGTCATTATCGTTTAACTGCTTTTAGATCAGGCTTAGCATCTTCTTGTGTGGAGGATGCTCCTGTGTTTTTCAGTTTCCATCTAAGTTTGTAAAATAAAGATTCTTCTTGTGTGAGGATATTAGGTTTCATTCAGTTTTATAATGAAATGGCCTTTCTAATGAAACTGC

Coding sequence (CDS)

ATGGCAAAAACCAACAAATACACTTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCTTCTTTCGCCTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCCCATGGCCGCATGCTTGTCCTGACCCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCTCTTTCCCCTCAACCCCTATCTCGACCCCCATCCGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGCGGGATCGCCCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGGCTCCTCCTCCGGCTGTGACGTTTCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGACAGTACGGGAATTATGGGCCTCCGAGCCGGTATGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGGCGGATCTGGTGGCGATAGTGAATCGGCCAAGATCCAGTGGGAATCGTCCGAGTTCTAGTGGATGA

Protein sequence

MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGGIAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG

Homology

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BLAST of ClCG02G002280 vs. TrEMBL
Match: A0A0A0K3D7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G039270 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 1.1e-112
Identity = 205/229 (89.52%), Postives = 209/229 (91.27%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTP+PITSP PLSPQP SRP SADHRPVPD  RPQSDSDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           IAPSPIP LEKD+E  PP VT HKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPIPVLEKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
           NYG   RYGEDGRPKSGGGYERMK  GEADL A+VNRPRSSGNRPSSSG
Sbjct: 181 NYGSSGRYGEDGRPKSGGGYERMKEVGEADLGAMVNRPRSSGNRPSSSG 229

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BLAST of ClCG02G002280 vs. TrEMBL
Match: U5FWS2_POPTR (Proteophosphoglycan-related family protein OS=Populus trichocarpa GN=POPTR_0013s06930g PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.1e-54
Identity = 128/248 (51.61%), Postives = 158/248 (63.71%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSK---TGNNPSKNPSSSSSSSFASATYSSISSPN--- 60
           MA+ NKY S+NFNH+YDKN+S++S    T NNPSK+PSS+S        YS+ISSPN   
Sbjct: 1   MARANKYASVNFNHVYDKNISNSSSSNNTNNNPSKHPSSTSF-------YSTISSPNSPN 60

Query: 61  ------------KSHGRMLVLTRPTPKPITS--PPPLSPQPLSRPPSADHRPVPDQTRPQ 120
                       ++HGRMLVLTRPTPKPI++    PL+P P + P       +P QT  +
Sbjct: 61  NLYKSHLPSSSPRTHGRMLVLTRPTPKPISTIQTTPLTPSPKTPPGHPAQVQIPVQTGAE 120

Query: 121 SDSDSISLRPLGRTGTGGIAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEE 180
            + D ISLRPLGRTG G I  SP+   EK KE    ++   KP+KFVPPHLR GF G+EE
Sbjct: 121 PEQDRISLRPLGRTGVGSIVSSPVRGQEKQKEV-GASLGSPKPDKFVPPHLRPGFAGREE 180

Query: 181 RPVNVGIRSREANQRQYGN-YGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSS 228
           RP     R +E  QRQ    +G P R+GEDGRPKS GGYE M+   E++L  +  RPRSS
Sbjct: 181 RPGPEVFRGKEVGQRQQQQFFGSPGRFGEDGRPKS-GGYETMRRGDESNLGFV--RPRSS 237

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BLAST of ClCG02G002280 vs. TrEMBL
Match: U5FY13_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s12500g PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.1e-54
Identity = 127/242 (52.48%), Postives = 155/242 (64.05%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPN------ 60
           MA+ NKY S+NFNH+YDKN+S NS + NN + NPS   SS+   +T SS +SPN      
Sbjct: 1   MARANKYASVNFNHVYDKNIS-NSTSSNNTNNNPSKHQSSTSFYSTISSPNSPNNLYKSH 60

Query: 61  ------KSHGRMLVLTRPTPKPITS--PPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSI 120
                 ++HGRMLVLTR TPKPI S   PPL+P P + P       +P QT  + +SD I
Sbjct: 61  LPSSSTRTHGRMLVLTRTTPKPIPSIQTPPLTPSPKTPPAHQAQVQIPVQTEAEPESDRI 120

Query: 121 SLRPLGRTGTGGIAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVG 180
           SLRPLGRTG G IA SP+   EK KE    +V   K +KFVPPHLR GFVG+EE+P    
Sbjct: 121 SLRPLGRTGAGSIASSPVHGQEKQKEV-GSSVGSPKSDKFVPPHLRPGFVGREEKPGPEV 180

Query: 181 IRSREANQRQYGN-YGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSS 228
            R +E  QRQ    +G P R+GE+GRPKS GGYE M+   E++L   VNRP SSGNRP S
Sbjct: 181 FRGKEVGQRQQQQFFGSPDRFGEEGRPKS-GGYEMMRRFDESNL-GFVNRPISSGNRPGS 238

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BLAST of ClCG02G002280 vs. TrEMBL
Match: A0A061E3D2_THECC (Proteophosphoglycan-related, putative OS=Theobroma cacao GN=TCM_008243 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 4.0e-54
Identity = 126/235 (53.62%), Postives = 164/235 (69.79%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSS---NSKTGNNPSKNPSSSSSSSFASATYSSISSPNKSH 60
           MA+TNKYTSINFNH+ +KNL+S   ++KT N  S +P+   S S  S+  ++ ++  K+H
Sbjct: 1   MARTNKYTSINFNHVLEKNLTSPPNSTKTKNPQSHHPNQPPSFSSYSSISAAAAANAKTH 60

Query: 61  GRMLVLTRPTPKPITSPPPLSPQP--LSRPPSADHR--PVPDQTRPQSDS-DSISLRPLG 120
           GRMLVLTRP+P PI++PP +SP P   S+P     R  P PDQT P   + D ISLRPLG
Sbjct: 61  GRMLVLTRPSPMPISTPPLVSPTPPKQSQPHQLQPRSAPAPDQTLPPDPAPDQISLRPLG 120

Query: 121 RTGTGGIAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREA 180
           RTG+G      IP  E++KE  P +V+  KP++FVPPHLR GFVG+EERP     R RE 
Sbjct: 121 RTGSG----ISIPVQEREKEVVPVSVS-PKPDRFVPPHLRPGFVGREERPGPQVFRGREQ 180

Query: 181 NQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
           +Q+ +G+   P RYGEDGRPK+ GGYE+M+  GE+DL  + +RPRSSGNRPSSSG
Sbjct: 181 SQKHFGS---PGRYGEDGRPKT-GGYEKMRRGGESDL-GLTDRPRSSGNRPSSSG 225

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BLAST of ClCG02G002280 vs. TrEMBL
Match: A9PEK5_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-53
Identity = 126/242 (52.07%), Postives = 154/242 (63.64%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPN------ 60
           MA+ NKY S+NFNH+ DKN+S NS + NN + NPS   SS+   +T SS +SPN      
Sbjct: 1   MARANKYASVNFNHVCDKNIS-NSTSSNNTNNNPSKHQSSTSFYSTISSPNSPNNLYKSH 60

Query: 61  ------KSHGRMLVLTRPTPKPITS--PPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSI 120
                 ++HGRMLVLTR TPKPI S   PPL+P P + P       +P QT  + +SD I
Sbjct: 61  LPSSSTRTHGRMLVLTRTTPKPIPSIQTPPLTPSPKTPPAHQAQVQIPVQTEAEPESDRI 120

Query: 121 SLRPLGRTGTGGIAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVG 180
           SLRPLGRTG G IA SP+   EK KE    +V   K +KFVPPHLR GFVG+EE+P    
Sbjct: 121 SLRPLGRTGAGSIASSPVHGQEKQKEV-GSSVGSPKSDKFVPPHLRPGFVGREEKPGPEV 180

Query: 181 IRSREANQRQYGN-YGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSS 228
            R +E  QRQ    +G P R+GE+GRPKS GGYE M+   E++L   VNRP SSGNRP S
Sbjct: 181 FRGKEVGQRQQQQFFGSPDRFGEEGRPKS-GGYEMMRRFDESNL-GFVNRPISSGNRPGS 238

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BLAST of ClCG02G002280 vs. TAIR10
Match: AT3G54680.1 (AT3G54680.1 proteophosphoglycan-related)

HSP 1 Score: 142.5 bits (358), Expect = 3.2e-34
Identity = 100/235 (42.55%), Postives = 126/235 (53.62%), Query Frame = 1


Query: 5   NKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPNKSHGRMLVLT 64
           NKYTSINFNHI  K+              PSSSSSSS  SA+YSS++   +S+GRMLVLT
Sbjct: 7   NKYTSINFNHILHKD-------------PPSSSSSSS--SASYSSVA---RSNGRMLVLT 66

Query: 65  RPTPKPITSPPPLSPQPLSRPPSADHRPVP-DQTRPQSDSDSISLRPLGRTGTGGIAPSP 124
           + +PKP+ SP        + PP +    +P +Q     D   ISLRPLG TG+      P
Sbjct: 67  KSSPKPLRSPSAAPTTTTTAPPISTAPRIPSNQAISDPDPSQISLRPLGHTGSSSSLSFP 126

Query: 125 I--PSLEKDKE--APPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREAN---QRQ 184
           I  P + K  E  AP P     KP++FVPPHLR GFV K+E+P     R R+ N    ++
Sbjct: 127 IRTPEINKAPEVNAPTPVSLSPKPDRFVPPHLRPGFVRKDEKPGLNSSRVRDPNPNLNQR 186

Query: 185 YGNYGPPSR----YGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
             N   P +    YG+ GRPKS GGYER++             PR +GNRP +SG
Sbjct: 187 LPNQEQPRQEYFGYGQPGRPKS-GGYERIR-----------TDPRITGNRPGTSG 211

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BLAST of ClCG02G002280 vs. NCBI nr
Match: gi|449453547|ref|XP_004144518.1| (PREDICTED: uncharacterized protein LOC101206223 isoform X1 [Cucumis sativus])

HSP 1 Score: 414.1 bits (1063), Expect = 1.6e-112
Identity = 205/229 (89.52%), Postives = 209/229 (91.27%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTP+PITSP PLSPQP SRP SADHRPVPD  RPQSDSDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           IAPSPIP LEKD+E  PP VT HKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPIPVLEKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
           NYG   RYGEDGRPKSGGGYERMK  GEADL A+VNRPRSSGNRPSSSG
Sbjct: 181 NYGSSGRYGEDGRPKSGGGYERMKEVGEADLGAMVNRPRSSGNRPSSSG 229

[Close]

BLAST of ClCG02G002280 vs. NCBI nr
Match: gi|700188246|gb|KGN43479.1| (hypothetical protein Csa_7G039270 [Cucumis sativus])

HSP 1 Score: 414.1 bits (1063), Expect = 1.6e-112
Identity = 205/229 (89.52%), Postives = 209/229 (91.27%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTP+PITSP PLSPQP SRP SADHRPVPD  RPQSDSDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           IAPSPIP LEKD+E  PP VT HKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPIPVLEKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
           NYG   RYGEDGRPKSGGGYERMK  GEADL A+VNRPRSSGNRPSSSG
Sbjct: 181 NYGSSGRYGEDGRPKSGGGYERMKEVGEADLGAMVNRPRSSGNRPSSSG 229

[Close]

BLAST of ClCG02G002280 vs. NCBI nr
Match: gi|659110930|ref|XP_008455486.1| (PREDICTED: uncharacterized protein LOC103495638 isoform X1 [Cucumis melo])

HSP 1 Score: 414.1 bits (1063), Expect = 1.6e-112
Identity = 206/229 (89.96%), Postives = 210/229 (91.70%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPITSP  LSPQP SRP SADHRPVPDQ RPQSDSDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPITSPQVLSPQPQSRPSSADHRPVPDQPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           IAPSPI  LEK++E  PP VT HKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPITGLEKNREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
           NYG  SRYGEDGRPKSGGGYERMKG GEADL A+VNRPRSSGNRPSSSG
Sbjct: 181 NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 229

[Close]

BLAST of ClCG02G002280 vs. NCBI nr
Match: gi|1009128535|ref|XP_015881282.1| (PREDICTED: uncharacterized protein LOC107417199 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 246.1 bits (627), Expect = 5.8e-62
Identity = 145/235 (61.70%), Postives = 165/235 (70.21%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGN--NPSKNPSSSSSSSFASATYSSISSPN-KSH 60
           MAKTN+YT+INFNHIYDKNL +NS   N  NP K  SSSSSSS AS +YS+IS+PN K H
Sbjct: 1   MAKTNRYTTINFNHIYDKNLPNNSNPNNASNPIKT-SSSSSSSLASLSYSAISAPNNKPH 60

Query: 61  GRMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRP----VPDQTRPQSDSDSISLRPLGR 120
           GRMLVLTRPT KPI+ PPPLSPQP S+   + H+P    VPDQ R +  SD+ISLRPLGR
Sbjct: 61  GRMLVLTRPTHKPISIPPPLSPQPQSQ---SSHQPQQNKVPDQDRSEQGSDTISLRPLGR 120

Query: 121 TGTGGIAPSPIPSLEKDKEAPPP-AVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREA 180
           TG G    S     EK+K       V   K +KFVPPHLR GFVG+EERP    IR+REA
Sbjct: 121 TGVGSPILSSALGQEKEKHKEHSLLVVSAKTDKFVPPHLRPGFVGREERPGPEVIRTREA 180

Query: 181 NQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
            Q+   +   P RY +  RPKSGGGYERMK AGE+DL  I  RPRSSGNRPSSSG
Sbjct: 181 GQKHIVS---PGRYDDLDRPKSGGGYERMKRAGESDL-GIAGRPRSSGNRPSSSG 227

[Close]

BLAST of ClCG02G002280 vs. NCBI nr
Match: gi|1009128533|ref|XP_015881281.1| (PREDICTED: uncharacterized protein LOC107417199 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 246.1 bits (627), Expect = 5.8e-62
Identity = 145/235 (61.70%), Postives = 165/235 (70.21%), Query Frame = 1


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGN--NPSKNPSSSSSSSFASATYSSISSPN-KSH 60
           MAKTN+YT+INFNHIYDKNL +NS   N  NP K  SSSSSSS AS +YS+IS+PN K H
Sbjct: 1   MAKTNRYTTINFNHIYDKNLPNNSNPNNASNPIKT-SSSSSSSLASLSYSAISAPNNKPH 60

Query: 61  GRMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRP----VPDQTRPQSDSDSISLRPLGR 120
           GRMLVLTRPT KPI+ PPPLSPQP S+   + H+P    VPDQ R +  SD+ISLRPLGR
Sbjct: 61  GRMLVLTRPTHKPISIPPPLSPQPQSQ---SSHQPQQNKVPDQDRSEQGSDTISLRPLGR 120

Query: 121 TGTGGIAPSPIPSLEKDKEAPPP-AVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREA 180
           TG G    S     EK+K       V   K +KFVPPHLR GFVG+EERP    IR+REA
Sbjct: 121 TGVGSPILSSALGQEKEKHKEHSLLVVSAKTDKFVPPHLRPGFVGREERPGPEVIRTREA 180

Query: 181 NQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
            Q+   +   P RY +  RPKSGGGYERMK AGE+DL  I  RPRSSGNRPSSSG
Sbjct: 181 GQKHIVS---PGRYDDLDRPKSGGGYERMKRAGESDL-GIAGRPRSSGNRPSSSG 227

The following BLAST results are available for this feature:

BLAST of ClCG02G002280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3D7_CUCSA	1.1e-112	89.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G039270 PE=4 SV=1	[more]
U5FWS2_POPTR	1.1e-54	51.61	Proteophosphoglycan-related family protein OS=Populus trichocarpa GN=POPTR_0013s...	[more]
U5FY13_POPTR	1.1e-54	52.48	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s12500g PE=4 SV=1	[more]
A0A061E3D2_THECC	4.0e-54	53.62	Proteophosphoglycan-related, putative OS=Theobroma cacao GN=TCM_008243 PE=4 SV=1	[more]
A9PEK5_POPTR	1.2e-53	52.07	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]

BLAST of ClCG02G002280 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54680.1	3.2e-34	42.55	proteophosphoglycan-related	[more]

BLAST of ClCG02G002280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453547\|ref\|XP_004144518.1\|	1.6e-112	89.52	PREDICTED: uncharacterized protein LOC101206223 isoform X1 [Cucumis sativus]	[more]
gi\|700188246\|gb\|KGN43479.1\|	1.6e-112	89.52	hypothetical protein Csa_7G039270 [Cucumis sativus]	[more]
gi\|659110930\|ref\|XP_008455486.1\|	1.6e-112	89.96	PREDICTED: uncharacterized protein LOC103495638 isoform X1 [Cucumis melo]	[more]
gi\|1009128535\|ref\|XP_015881282.1\|	5.8e-62	61.70	PREDICTED: uncharacterized protein LOC107417199 isoform X2 [Ziziphus jujuba]	[more]
gi\|1009128533\|ref\|XP_015881281.1\|	5.8e-62	61.70	PREDICTED: uncharacterized protein LOC107417199 isoform X1 [Ziziphus jujuba]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003743	translation initiation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G002280.1	ClCG02G002280.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG02G002280	Csa7G039270	Cucumber (Chinese Long) v2	cuwcgB546
ClCG02G002280	MELO3C018861	Melon (DHL92) v3.5.1	mewcgB195
ClCG02G002280	Cla015634	Watermelon (97103) v1	wcgwmB198
ClCG02G002280	Cla97C02G028710	Watermelon (97103) v2	wcgwmbB138
ClCG02G002280	Bhi05G001226	Wax gourd	wcgwgoB266
ClCG02G002280	CSPI07G03280	Wild cucumber (PI 183967)	cpiwcgB574
ClCG02G002280	Cucsa.181230	Cucumber (Gy14) v1	cgywcgB322
ClCG02G002280	CmaCh19G008960	Cucurbita maxima (Rimu)	cmawcgB460
ClCG02G002280	CmoCh19G009130	Cucurbita moschata (Rifu)	cmowcgB459
ClCG02G002280	CmoCh11G018770	Cucurbita moschata (Rifu)	cmowcgB094
ClCG02G002280	Lsi11G014020	Bottle gourd (USVL1VR-Ls)	lsiwcgB097
ClCG02G002280	Cp4.1LG04g03760	Cucurbita pepo (Zucchini)	cpewcgB596
ClCG02G002280	Cp4.1LG15g07170	Cucurbita pepo (Zucchini)	cpewcgB233
ClCG02G002280	CsGy7G002920	Cucumber (Gy14) v2	cgybwcgB506
ClCG02G002280	MELO3C018861.2	Melon (DHL92) v3.6.1	medwcgB190
ClCG02G002280	Carg04179	Silver-seed gourd	carwcgB0194
ClCG02G002280	Carg18040	Silver-seed gourd	carwcgB1037
ClCG02G002280	CsaV3_7G003160	Cucumber (Chinese Long) v3	cucwcgB571

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G002280	Wax gourd	wcgwgoB305
ClCG02G002280	Watermelon (Charleston Gray)	wcgwcgB047
ClCG02G002280	Cucurbita maxima (Rimu)	cmawcgB102
ClCG02G002280	Cucurbita maxima (Rimu)	cmawcgB494
ClCG02G002280	Cucurbita maxima (Rimu)	cmawcgB532
ClCG02G002280	Cucurbita moschata (Rifu)	cmowcgB484
ClCG02G002280	Cucurbita moschata (Rifu)	cmowcgB529
ClCG02G002280	Wild cucumber (PI 183967)	cpiwcgB134
ClCG02G002280	Wild cucumber (PI 183967)	cpiwcgB218
ClCG02G002280	Cucumber (Chinese Long) v2	cuwcgB128
ClCG02G002280	Melon (DHL92) v3.5.1	mewcgB092
ClCG02G002280	Watermelon (97103) v1	wcgwmB178
ClCG02G002280	Cucurbita pepo (Zucchini)	cpewcgB267
ClCG02G002280	Cucurbita pepo (Zucchini)	cpewcgB665
ClCG02G002280	Bottle gourd (USVL1VR-Ls)	lsiwcgB058
ClCG02G002280	Bottle gourd (USVL1VR-Ls)	lsiwcgB095
ClCG02G002280	Cucumber (Gy14) v2	cgybwcgB123
ClCG02G002280	Cucumber (Gy14) v2	cgybwcgB198
ClCG02G002280	Cucumber (Gy14) v2	cgybwcgB504
ClCG02G002280	Cucumber (Chinese Long) v3	cucwcgB141
ClCG02G002280	Cucumber (Chinese Long) v3	cucwcgB219
ClCG02G002280	Cucumber (Chinese Long) v3	cucwcgB570
ClCG02G002280	Watermelon (97103) v2	wcgwmbB135
ClCG02G002280	Watermelon (97103) v2	wcgwmbB150