Cla97C02G028710 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G028710
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	translation initiation factor IF-2-like
Location	Cla97Chr02 : 2184905 .. 2185663 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAAACCAACAAATACACTTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCTTCTTTCGCCTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCCCATGGCCGCATGCTTGTCCTGACCCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCTCTTTCCCCTCAACCCCTATCTCGACCCCCATCCGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGCGGGATCGCCCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGGCTCCTCCTCCGGCTGTGACGTTTCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGACAGTACGGGAATTATGGGCCTCCGAGCCGGTATGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGGCGGATCTGGTGGCGATAGTGAATCGGCCAAGATCCAGTGGGAATCGTCCGAGTTCTAGTGGATGGTATGTTTCTGTCAAATCCTTGCCCTTTTTACCTTCTCTAAGTCCTTATCAATTAATTGCGATTATGGAGACATAA

mRNA sequence

ATGGCAAAAACCAACAAATACACTTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCTTCTTTCGCCTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCCCATGGCCGCATGCTTGTCCTGACCCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCTCTTTCCCCTCAACCCCTATCTCGACCCCCATCCGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGCGGGATCGCCCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGGCTCCTCCTCCGGCTGTGACGTTTCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGACAGTACGGGAATTATGGGCCTCCGAGCCGGTATGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGGCGGATCTGGTGGCGATAGTGAATCGGCCAAGATCCAGTGGGAATCGTCCGAGTTCTAGTGGATGGTATGTTTCTGTCAAATCCTTGCCCTTTTTACCTTCTCTAAGTCCTTATCAATTAATTGCGATTATGGAGACATAA

Coding sequence (CDS)

ATGGCAAAAACCAACAAATACACTTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCTTCTTTCGCCTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCCCATGGCCGCATGCTTGTCCTGACCCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCTCTTTCCCCTCAACCCCTATCTCGACCCCCATCCGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGCGGGATCGCCCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGGCTCCTCCTCCGGCTGTGACGTTTCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGACAGTACGGGAATTATGGGCCTCCGAGCCGGTATGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGGCGGATCTGGTGGCGATAGTGAATCGGCCAAGATCCAGTGGGAATCGTCCGAGTTCTAGTGGATGGTATGTTTCTGTCAAATCCTTGCCCTTTTTACCTTCTCTAAGTCCTTATCAATTAATTGCGATTATGGAGACATAA

Protein sequence

MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGGIAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSGWYVSVKSLPFLPSLSPYQLIAIMET

Homology

[Close]

BLAST of Cla97C02G028710 vs. NCBI nr
Match: XP_022952342.1 (uncharacterized protein LOC111455051 isoform X2 [Cucurbita moschata])

HSP 1 Score: 283.1 bits (723), Expect = 9.2e-73
Identity = 188/229 (82.10%), Postives = 196/229 (85.59%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLS--SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNKSHG 60
           MAKTNKYTSIN+NHIYDK+LS  S   XXXXXXXXXXXXXXXXXXXXXXXXXXX  KSHG
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPXXXXXXXXXXXADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPI+SPP         XXXAD RPV DQTRPQ +SDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPISSPPVLSPQPQSRXXXADPRPVADQTRPQCESDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           IAPSPIP+LEKDKE PPP VT HKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQYG
Sbjct: 121 IAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYG 180

Query: 181 NYGPPSRXXXXXXXXSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
           NYG P  XXXXX   SGG YERM GAGEAD  A+VNRPRSSGNRP+SSG
Sbjct: 181 NYGSPXXXXXXXRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSG 229

[Close]

BLAST of Cla97C02G028710 vs. NCBI nr
Match: XP_023554572.1 (uncharacterized protein LOC111811777 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 279.6 bits (714), Expect = 1.0e-71
Identity = 187/230 (81.30%), Postives = 195/230 (84.78%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLS--SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNKSHG 60
           MAKTNKYTSIN+NHIYDK+LS  S   XXXXXXXXXXXXXXXXXXXXXXXXXXX  KSHG
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPXXXXXXXXXXXADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPI+SPP         XXXAD RPV DQTRPQ +SDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPISSPPVLSPQPQSRXXXADPRPVADQTRPQCESDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           IAPSPIP+LEKDKE PPP VT HK EKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG
Sbjct: 121 IAPSPIPNLEKDKEIPPPTVTLHKTEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180

Query: 181 NYGPPSRXXXXXXXXSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSGW 229
           NYG    XXXXXX  SGG YER+ GAGEAD  A+VNRPRSSGN P+SSGW
Sbjct: 181 NYGSXXXXXXXXXPKSGGAYERVNGAGEADQGAMVNRPRSSGNHPNSSGW 230

[Close]

BLAST of Cla97C02G028710 vs. NCBI nr
Match: XP_023554573.1 (uncharacterized protein LOC111811777 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.4 bits (703), Expect = 1.9e-70
Identity = 186/229 (81.22%), Postives = 194/229 (84.72%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLS--SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNKSHG 60
           MAKTNKYTSIN+NHIYDK+LS  S   XXXXXXXXXXXXXXXXXXXXXXXXXXX  KSHG
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPXXXXXXXXXXXADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPI+SPP         XXXAD RPV DQTRPQ +SDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPISSPPVLSPQPQSRXXXADPRPVADQTRPQCESDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           IAPSPIP+LEKDKE PPP VT HK EKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG
Sbjct: 121 IAPSPIPNLEKDKEIPPPTVTLHKTEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180

Query: 181 NYGPPSRXXXXXXXXSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
           NYG    XXXXXX  SGG YER+ GAGEAD  A+VNRPRSSGN P+SSG
Sbjct: 181 NYGSXXXXXXXXXPKSGGAYERVNGAGEADQGAMVNRPRSSGNHPNSSG 229

[Close]

BLAST of Cla97C02G028710 vs. NCBI nr
Match: XP_022952341.1 (uncharacterized protein LOC111455051 isoform X1 [Cucurbita moschata])

HSP 1 Score: 267.3 bits (682), Expect = 5.2e-68
Identity = 180/220 (81.82%), Postives = 187/220 (85.00%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLS--SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNKSHG 60
           MAKTNKYTSIN+NHIYDK+LS  S   XXXXXXXXXXXXXXXXXXXXXXXXXXX  KSHG
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPXXXXXXXXXXXADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPI+SPP         XXXAD RPV DQTRPQ +SDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPISSPPVLSPQPQSRXXXADPRPVADQTRPQCESDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           IAPSPIP+LEKDKE PPP VT HKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQYG
Sbjct: 121 IAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYG 180

Query: 181 NYGPPSRXXXXXXXXSGGGYERMKGAGEADLVAIVNRPRS 219
           NYG P  XXXXX   SGG YERM GAGEAD  A+VNRPRS
Sbjct: 181 NYGSPGXXXXXXRPKSGGAYERMNGAGEADQGAMVNRPRS 220

[Close]

BLAST of Cla97C02G028710 vs. NCBI nr
Match: XP_022969243.1 (uncharacterized protein LOC111468300 isoform X2 [Cucurbita maxima])

HSP 1 Score: 257.3 bits (656), Expect = 5.4e-65
Identity = 179/231 (77.49%), Postives = 186/231 (80.52%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNL---SSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNKSH 60
           MAKTNKYTSIN+NHIYDK+L   S   XXXXXXXXXXXXXXXXXXXXXXXXXXXX  KSH
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSH 60

Query: 61  GRMLVLTRPTPKPITSPPPXXXXXXXXXXXADHRPVPDQTRPQSDSDSISLRPLGRTGTG 120
           GRMLVLTRPTPKPI+S P            AD RPV DQT PQ +SDSISLRPLGRTGTG
Sbjct: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120

Query: 121 GIAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180
            IAPSPIP+LEKDKE PPP VT HKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY
Sbjct: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180

Query: 181 GNYGPPSRXXXXXXXXSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSGW 229
           G       XXXXXXXX     ERM GAGEAD   +VNRPRSSGNRP+SSGW
Sbjct: 181 GXXXXXXXXXXXXXXXXXXANERMNGAGEADQGEMVNRPRSSGNRPNSSGW 231

[Close]

BLAST of Cla97C02G028710 vs. TrEMBL
Match: tr|A0A1S3C160|A0A1S3C160_CUCME (translation initiation factor IF-2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495638 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 8.3e-62
Identity = 174/229 (75.98%), Postives = 177/229 (77.29%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLS--SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNKSHG 60
           MAKTNKYTSINFNHIYDKNLS  S XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPXXXXXXXXXXXADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPITSP      XXXX   ADH                   PLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPITSPQVLSPQXXXXPSSADHXXXXXXXXXXXXXXXXXXXPLGRTGTGA 120

Query: 121 IAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           IAPSPI  LEK++E  PP VT HKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPITGLEKNREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRXXXXXXXXSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
           NYG  S XX      SGGGYERMKG GEADL A+VNRPRSSGNRPSSSG
Sbjct: 181 NYGSSSXXXEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 229

[Close]

BLAST of Cla97C02G028710 vs. TrEMBL
Match: tr|A0A2I4EXX4|A0A2I4EXX4_9ROSI (uncharacterized protein LOC108993711 isoform X1 OS=Juglans regia OX=51240 GN=LOC108993711 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 4.0e-40
Identity = 123/228 (53.95%), Postives = 145/228 (63.60%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNKSHGRM 60
           MAKTNKYT+INFNHIYDK+L +               XXXXXXX          K+HGRM
Sbjct: 1   MAKTNKYTTINFNHIYDKSLFANPSPSSNNTSKPTKNXXXXXXXYSSISSP---KAHGRM 60

Query: 61  LVLTRPTPKPITSPPPXXXXXXXXXXXADHRPVPDQTRPQSDSDSISLRPLGRTGTGGIA 120
           LVLTRPTPK    P  XXXXXXXX      +  PDQ R Q +SD ISLRPLGRTGTG  +
Sbjct: 61  LVLTRPTPK----PXXXXXXXXXXSQLQPSQSFPDQARSQPNSDHISLRPLGRTGTGSHS 120

Query: 121 PSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNY 180
            SP+PSLEK+K+   P VT  KP+KFVPPHLR GF G+EERP   G+   +  +    N+
Sbjct: 121 FSPVPSLEKEKDVAIP-VTSSKPDKFVPPHLRPGFEGREERP---GLELGKRRELSRNNF 180

Query: 181 GPPSRXXXXXXXXSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSGW 229
             P +        SGGGYERM G G++DL  +V++PRSSG RPSSSGW
Sbjct: 181 RSPGQYGEDQRPKSGGGYERMTGGGDSDL-GMVSQPRSSGYRPSSSGW 216

[Close]

BLAST of Cla97C02G028710 vs. TrEMBL
Match: tr|A0A2I4DQA2|A0A2I4DQA2_9ROSI (uncharacterized protein LOC108982412 isoform X1 OS=Juglans regia OX=51240 GN=LOC108982412 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 6.8e-40
Identity = 123/228 (53.95%), Postives = 144/228 (63.16%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNKSHGRM 60
           MAKTNKYT+INFNHIYDK+L +               XXXXXXX          K+HGRM
Sbjct: 1   MAKTNKYTTINFNHIYDKSLFANPSPSSNNTSKPTKNXXXXXXXYSSISSP---KAHGRM 60

Query: 61  LVLTRPTPKPITSPPPXXXXXXXXXXXADHRPVPDQTRPQSDSDSISLRPLGRTGTGGIA 120
           LVLTRPTPK    P  XXXXXXXX      +  PDQ R Q +SD ISLRPLGRTGTG   
Sbjct: 61  LVLTRPTPK----PXXXXXXXXXXSQLQPSQSFPDQARSQPNSDHISLRPLGRTGTGSPI 120

Query: 121 PSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNY 180
            SP+PSLEK+K+   P VT  KP+KFVPPHLR GF G+EERP   G+   +  +    N+
Sbjct: 121 FSPVPSLEKEKDVAIP-VTSSKPDKFVPPHLRPGFEGREERP---GLELGKRRELSRNNF 180

Query: 181 GPPSRXXXXXXXXSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSGW 229
             P +        SGGGYERM G G++DL  +V++PRSSG RPSSSGW
Sbjct: 181 RSPGQYGEDQRPKSGGGYERMTGGGDSDL-GMVSQPRSSGYRPSSSGW 216

[Close]

BLAST of Cla97C02G028710 vs. TrEMBL
Match: tr|A0A2I4EXX2|A0A2I4EXX2_9ROSI (uncharacterized protein LOC108993711 isoform X2 OS=Juglans regia OX=51240 GN=LOC108993711 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 7.5e-39
Identity = 122/227 (53.74%), Postives = 144/227 (63.44%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNKSHGRM 60
           MAKTNKYT+INFNHIYDK+L +               XXXXXXX          K+HGRM
Sbjct: 1   MAKTNKYTTINFNHIYDKSLFANPSPSSNNTSKPTKNXXXXXXXYSSISSP---KAHGRM 60

Query: 61  LVLTRPTPKPITSPPPXXXXXXXXXXXADHRPVPDQTRPQSDSDSISLRPLGRTGTGGIA 120
           LVLTRPTPK    P  XXXXXXXX      +  PDQ R Q +SD ISLRPLGRTGTG  +
Sbjct: 61  LVLTRPTPK----PXXXXXXXXXXSQLQPSQSFPDQARSQPNSDHISLRPLGRTGTGSHS 120

Query: 121 PSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNY 180
            SP+PSLEK+K+   P VT  KP+KFVPPHLR GF G+EERP   G+   +  +    N+
Sbjct: 121 FSPVPSLEKEKDVAIP-VTSSKPDKFVPPHLRPGFEGREERP---GLELGKRRELSRNNF 180

Query: 181 GPPSRXXXXXXXXSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
             P +        SGGGYERM G G++DL  +V++PRSSG RPSSSG
Sbjct: 181 RSPGQYGEDQRPKSGGGYERMTGGGDSDL-GMVSQPRSSGYRPSSSG 215

[Close]

BLAST of Cla97C02G028710 vs. TrEMBL
Match: tr|A0A2I4DQA3|A0A2I4DQA3_9ROSI (uncharacterized protein LOC108982412 isoform X2 OS=Juglans regia OX=51240 GN=LOC108982412 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.3e-38
Identity = 122/227 (53.74%), Postives = 143/227 (63.00%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNKSHGRM 60
           MAKTNKYT+INFNHIYDK+L +               XXXXXXX          K+HGRM
Sbjct: 1   MAKTNKYTTINFNHIYDKSLFANPSPSSNNTSKPTKNXXXXXXXYSSISSP---KAHGRM 60

Query: 61  LVLTRPTPKPITSPPPXXXXXXXXXXXADHRPVPDQTRPQSDSDSISLRPLGRTGTGGIA 120
           LVLTRPTPK    P  XXXXXXXX      +  PDQ R Q +SD ISLRPLGRTGTG   
Sbjct: 61  LVLTRPTPK----PXXXXXXXXXXSQLQPSQSFPDQARSQPNSDHISLRPLGRTGTGSPI 120

Query: 121 PSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNY 180
            SP+PSLEK+K+   P VT  KP+KFVPPHLR GF G+EERP   G+   +  +    N+
Sbjct: 121 FSPVPSLEKEKDVAIP-VTSSKPDKFVPPHLRPGFEGREERP---GLELGKRRELSRNNF 180

Query: 181 GPPSRXXXXXXXXSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
             P +        SGGGYERM G G++DL  +V++PRSSG RPSSSG
Sbjct: 181 RSPGQYGEDQRPKSGGGYERMTGGGDSDL-GMVSQPRSSGYRPSSSG 215

[Close]

BLAST of Cla97C02G028710 vs. TAIR10
Match: AT3G54680.1 (proteophosphoglycan-related)

HSP 1 Score: 75.1 bits (183), Expect = 6.9e-14
Identity = 54/150 (36.00%), Postives = 72/150 (48.00%), Query Frame = 0


Query: 95  DQTRPQSDSDSISLRPLGRTGTGGIAPSPI--PSLEKDKE--APPPAVTFHKPEKFVPPH 154
           +Q     D   ISLRPLG TG+      PI  P + K  E  AP P     KP++FVPPH
Sbjct: 80  NQAISDPDPSQISLRPLGHTGSSSSLSFPIRTPEINKAPEVNAPTPVSLSPKPDRFVPPH 139

Query: 155 LRAGFVGKEERP-------------VNVGIRSREANQRQYGNYGPPSRXXXXXXXXSGGG 214
           LR GFV K+E+P             +N  + ++E  +++Y  YG P R          GG
Sbjct: 140 LRPGFVRKDEKPGLNSSRVRDPNPNLNQRLPNQEQPRQEYFGYGQPGR-------PKSGG 199

Query: 215 YERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
           YER++             PR +GNRP +SG
Sbjct: 200 YERIR-----------TDPRITGNRPGTSG 211

The following BLAST results are available for this feature:

BLAST of Cla97C02G028710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952342.1	9.2e-73	82.10	uncharacterized protein LOC111455051 isoform X2 [Cucurbita moschata]	[more]
XP_023554572.1	1.0e-71	81.30	uncharacterized protein LOC111811777 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023554573.1	1.9e-70	81.22	uncharacterized protein LOC111811777 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022952341.1	5.2e-68	81.82	uncharacterized protein LOC111455051 isoform X1 [Cucurbita moschata]	[more]
XP_022969243.1	5.4e-65	77.49	uncharacterized protein LOC111468300 isoform X2 [Cucurbita maxima]	[more]

BLAST of Cla97C02G028710 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C160\|A0A1S3C160_CUCME	8.3e-62	75.98	translation initiation factor IF-2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A2I4EXX4\|A0A2I4EXX4_9ROSI	4.0e-40	53.95	uncharacterized protein LOC108993711 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4DQA2\|A0A2I4DQA2_9ROSI	6.8e-40	53.95	uncharacterized protein LOC108982412 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4EXX2\|A0A2I4EXX2_9ROSI	7.5e-39	53.74	uncharacterized protein LOC108993711 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4DQA3\|A0A2I4DQA3_9ROSI	1.3e-38	53.74	uncharacterized protein LOC108982412 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]

BLAST of Cla97C02G028710 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C02G028710 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54680.1	6.9e-14	36.00	proteophosphoglycan-related	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G028710.1	Cla97C02G028710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..202

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C02G028710	Cla015634	Watermelon (97103) v1	wmwmbB317
Cla97C02G028710	Csa7G039270	Cucumber (Chinese Long) v2	cuwmbB529
Cla97C02G028710	MELO3C018861	Melon (DHL92) v3.5.1	mewmbB178
Cla97C02G028710	ClCG02G002280	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G028710	CSPI07G03280	Wild cucumber (PI 183967)	cpiwmbB553
Cla97C02G028710	Cucsa.181230	Cucumber (Gy14) v1	cgywmbB326
Cla97C02G028710	CmaCh19G008960	Cucurbita maxima (Rimu)	cmawmbB531
Cla97C02G028710	CmoCh11G018770	Cucurbita moschata (Rifu)	cmowmbB094
Cla97C02G028710	CmoCh19G009130	Cucurbita moschata (Rifu)	cmowmbB512
Cla97C02G028710	Lsi11G014020	Bottle gourd (USVL1VR-Ls)	lsiwmbB086
Cla97C02G028710	CsGy7G002920	Cucumber (Gy14) v2	cgybwmbB502
Cla97C02G028710	MELO3C018861.2	Melon (DHL92) v3.6.1	medwmbB164
Cla97C02G028710	Carg04179	Silver-seed gourd	carwmbB0202
Cla97C02G028710	Carg18040	Silver-seed gourd	carwmbB1124
Cla97C02G028710	CsaV3_7G003160	Cucumber (Chinese Long) v3	cucwmbB549
Cla97C02G028710	Bhi05G001226	Wax gourd	wgowmbB241

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G028710	Wax gourd	wgowmbB376
Cla97C02G028710	Silver-seed gourd	carwmbB0348
Cla97C02G028710	Cucumber (Gy14) v2	cgybwmbB118
Cla97C02G028710	Cucumber (Gy14) v2	cgybwmbB500
Cla97C02G028710	Cucurbita maxima (Rimu)	cmawmbB105
Cla97C02G028710	Cucurbita maxima (Rimu)	cmawmbB582
Cla97C02G028710	Cucurbita maxima (Rimu)	cmawmbB618
Cla97C02G028710	Cucurbita moschata (Rifu)	cmowmbB552
Cla97C02G028710	Wild cucumber (PI 183967)	cpiwmbB126
Cla97C02G028710	Wild cucumber (PI 183967)	cpiwmbB552
Cla97C02G028710	Cucumber (Chinese Long) v3	cucwmbB127
Cla97C02G028710	Cucumber (Chinese Long) v3	cucwmbB548
Cla97C02G028710	Cucumber (Chinese Long) v2	cuwmbB124
Cla97C02G028710	Cucumber (Chinese Long) v2	cuwmbB527
Cla97C02G028710	Bottle gourd (USVL1VR-Ls)	lsiwmbB055
Cla97C02G028710	Melon (DHL92) v3.6.1	medwmbB090
Cla97C02G028710	Melon (DHL92) v3.5.1	mewmbB094
Cla97C02G028710	Watermelon (Charleston Gray)	wcgwmbB150