Cla007441 (gene) Watermelon (97103) v1

NameCla007441
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr5 : 23366744 .. 23367304 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGATTCCTATTTTCTAGACCGACCGGCCGCCACCGGCTACAACCCCACCAGAATTTCAAATAAGTTTCCCCTTGAAAATACCGCTGTTTCTGGTTACACCCACGGCGGACTTTTGCAAACGCCGCCGCGGTTCCTCTCAGCTCCGTCATTCCACAGCCACCAATTTTACCCTTTCATCCAGCAACAACAACCACCGCCTCTCCTTCCGCCGCCGAGTACTCTACGGCCCCACCGCTCTCTTCCTTCTCAACCCCGATTCCACTCGCTTAAGAAATCCAAATCCACAAAAAGAGACAAAGACTCGGCGGCGGCGGTGGATCGGAGGATTTCTTCTAGAACCTTCTCGTCGGCGGCGGGGAAGAGGGTCGTTAGAGTTGAGGAATTGGAGAAATTGTCGGGGTGTTTATTTGCGGTTATTTCTCCGCCGCCCAGCAGTTTGCCGCTGCCCAAATTTTCTCTGAGGCCGGCGAAGCTTAATTGCAACGTGGAGGCTGCCGGAGCCGACGACGGAGCCGCCGCAGCGGACGATCTCCGGCGACTTCTTCGCCTTCACTGA

mRNA sequence

ATGGCCGATTCCTATTTTCTAGACCGACCGGCCGCCACCGGCTACAACCCCACCAGAATTTCAAATAAGTTTCCCCTTGAAAATACCGCTGTTTCTGGTTACACCCACGGCGGACTTTTGCAAACGCCGCCGCGGTTCCTCTCAGCTCCGTCATTCCACAGCCACCAATTTTACCCTTTCATCCAGCAACAACAACCACCGCCTCTCCTTCCGCCGCCGAGTACTCTACGGCCCCACCGCTCTCTTCCTTCTCAACCCCGATTCCACTCGCTTAAGAAATCCAAATCCACAAAAAGAGACAAAGACTCGGCGGCGGCGGTGGATCGGAGGATTTCTTCTAGAACCTTCTCGTCGGCGGCGGGGAAGAGGGTCGTTAGAGTTGAGGAATTGGAGAAATTGTCGGGGTGTTTATTTGCGGTTATTTCTCCGCCGCCCAGCAGTTTGCCGCTGCCCAAATTTTCTCTGAGGCCGGCGAAGCTTAATTGCAACGTGGAGGCTGCCGGAGCCGACGACGGAGCCGCCGCAGCGGACGATCTCCGGCGACTTCTTCGCCTTCACTGA

Coding sequence (CDS)

ATGGCCGATTCCTATTTTCTAGACCGACCGGCCGCCACCGGCTACAACCCCACCAGAATTTCAAATAAGTTTCCCCTTGAAAATACCGCTGTTTCTGGTTACACCCACGGCGGACTTTTGCAAACGCCGCCGCGGTTCCTCTCAGCTCCGTCATTCCACAGCCACCAATTTTACCCTTTCATCCAGCAACAACAACCACCGCCTCTCCTTCCGCCGCCGAGTACTCTACGGCCCCACCGCTCTCTTCCTTCTCAACCCCGATTCCACTCGCTTAAGAAATCCAAATCCACAAAAAGAGACAAAGACTCGGCGGCGGCGGTGGATCGGAGGATTTCTTCTAGAACCTTCTCGTCGGCGGCGGGGAAGAGGGTCGTTAGAGTTGAGGAATTGGAGAAATTGTCGGGGTGTTTATTTGCGGTTATTTCTCCGCCGCCCAGCAGTTTGCCGCTGCCCAAATTTTCTCTGAGGCCGGCGAAGCTTAATTGCAACGTGGAGGCTGCCGGAGCCGACGACGGAGCCGCCGCAGCGGACGATCTCCGGCGACTTCTTCGCCTTCACTGA

Protein sequence

MADSYFLDRPAATGYNPTRISNKFPLENTAVSGYTHGGLLQTPPRFLSAPSFHSHQFYPFIQQQQPPPLLPPPSTLRPHRSLPSQPRFHSLKKSKSTKRDKDSAAAVDRRISSRTFSSAAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLNCNVEAAGADDGAAAADDLRRLLRLH
BLAST of Cla007441 vs. TrEMBL
Match: A0A0A0LJ69_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G873260 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.8e-76
Identity = 153/195 (78.46%), Postives = 164/195 (84.10%), Query Frame = 1

Query: 1   MADSYFLDRPAATGYNPTRISNKFPLEN-TAVSGYTHGGLLQTPPRFLSAPSFHSHQFYP 60
           MAD YFLDR  +TG+N TRISN F LEN  AVSG++HGGLLQTPPRFLSAPSFH+HQ YP
Sbjct: 1   MADPYFLDRSPSTGHNLTRISNHFHLENLAAVSGFSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQPPPLLPPP-----STLRPHRSLPSQPRFHSLKKSKSTKRDKDSAAAVDRRISSR 120
           F QQ + PPLLPPP     S +RPHRSLPSQPR HSLKKSKST+++KDSAA VDRRI SR
Sbjct: 61  FFQQNKSPPLLPPPPTPTQSNIRPHRSLPSQPRSHSLKKSKSTRKEKDSAAVVDRRIPSR 120

Query: 121 TFSS--AAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAK-LNCNVEAAGADD 180
           T SS  A  KRVVRVEELEKLSGC F VISPPPSSLPLPKFS+RPAK LNCNVEA G DD
Sbjct: 121 TISSAGAGAKRVVRVEELEKLSGCFFTVISPPPSSLPLPKFSMRPAKALNCNVEAVGVDD 180

Query: 181 GAAAADDLRRLLRLH 187
           GAAAADDLRRLLRLH
Sbjct: 181 GAAAADDLRRLLRLH 195

BLAST of Cla007441 vs. TrEMBL
Match: F6H1M4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14640 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.5e-19
Identity = 87/204 (42.65%), Postives = 108/204 (52.94%), Query Frame = 1

Query: 16  NPTRISNKF---PLENTAVSGYTHGGLLQTPPRFLSAPSFHSHQ--FYPFIQQQQPPPL- 75
           NP R + +F   P EN + S   HGGLL  PP  LS+ SFHS    F      QQPP L 
Sbjct: 22  NPKRNNRRFISKPSENLSPSRNIHGGLLLAPPPSLSS-SFHSSALLFDHHPHHQQPPLLP 81

Query: 76  LPPPSTLR--PHRSLP----SQPRFHSL--KKSKSTKRDKDSAAAVDRRISSRTFSSAAG 135
           LP P T    P RS P    ++ R  SL  KKSK + R      +    IS  +  +A+ 
Sbjct: 82  LPVPKTYASLPPRSPPLNKKTKIRDQSLTPKKSKPSSRSPKKEDSKSTAISDGSVMAAST 141

Query: 136 KRV--------------------VRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLN 186
            R+                    + +E+L+K SG +F  +SPPPSSLPLPKFSLRP KL+
Sbjct: 142 NRLGPDPKDLPKDAVSRILTSGNIVIEDLDKFSGSVFT-LSPPPSSLPLPKFSLRP-KLS 201

BLAST of Cla007441 vs. TrEMBL
Match: A0A067H1W0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039600mg PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-16
Identity = 76/194 (39.18%), Postives = 93/194 (47.94%), Query Frame = 1

Query: 36  HGGLLQTPPRF------LSAPSFHSHQFYPFIQQQQPPPLLPPPSTLRPHRSLPSQPR-- 95
           H G+L  PP        LS  ++H        QQQQPPPLLP P     H  LPS+ R  
Sbjct: 39  HRGILLAPPLTTYSYPPLSLDNYHQ-------QQQQPPPLLPLPI----HNPLPSRSRYP 98

Query: 96  ---------FHSLKKSKST-----KRDKDSAAA----VDRRISS---------------- 155
                      SL   KS      KR+ +S       +++ IS                 
Sbjct: 99  INRKSNRTRDQSLTPKKSNSKRPNKREDESKIELLKPIEKTISESFIVTSVNPSGPDPND 158

Query: 156 --RTFSSAAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLNCNVEAAGADD 186
             +  S      +V V++LEK SG LF V SPPPSSLPLPKF+LRP  ++CN EAAG D 
Sbjct: 159 LPKDVSKVLSAGIVAVKDLEKFSGSLFTV-SPPPSSLPLPKFALRPKPISCNAEAAGVD- 218

BLAST of Cla007441 vs. TrEMBL
Match: V4SL18_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002425mg PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-16
Identity = 76/194 (39.18%), Postives = 93/194 (47.94%), Query Frame = 1

Query: 36  HGGLLQTPPRF------LSAPSFHSHQFYPFIQQQQPPPLLPPPSTLRPHRSLPSQPR-- 95
           H G+L  PP        LS  ++H        QQQQPPPLLP P     H  LPS+ R  
Sbjct: 39  HRGILLAPPLTTYSYPPLSLDNYHQ-------QQQQPPPLLPLPI----HNPLPSRSRYP 98

Query: 96  ---------FHSLKKSKST-----KRDKDSAAA----VDRRISS---------------- 155
                      SL   KS      KR+ +S       +++ IS                 
Sbjct: 99  INRKSNRTRDQSLTPKKSNSKRPNKREDESKIELLKPIEKTISESFIVTSVNPSGPDPND 158

Query: 156 --RTFSSAAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLNCNVEAAGADD 186
             +  S      +V V++LEK SG LF V SPPPSSLPLPKF+LRP  ++CN EAAG D 
Sbjct: 159 LPKDVSKVLSAGIVAVKDLEKFSGSLFTV-SPPPSSLPLPKFALRPKLISCNAEAAGVD- 218

BLAST of Cla007441 vs. TrEMBL
Match: A0A022REI2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014362mg PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-15
Identity = 64/156 (41.03%), Postives = 78/156 (50.00%), Query Frame = 1

Query: 37  GGLLQTPPRFLSAPSFHSHQFYPFIQQQQPPPLLPPPSTLRPH----RSLPSQPRFHSLK 96
           GGLLQ PP  L  P   SH + P+  Q Q PPLLP P+         R L   P   + K
Sbjct: 50  GGLLQPPPPSLRRPFLASHSYPPYSVQLQQPPLLPLPAAAHRRGAAARGLSCPPA--ASK 109

Query: 97  KSKSTKRDKDSAAAVDRRISSRTFSSAAGKRVVRVEELEKLSG-CLFAVISPPPSSLPLP 156
           K+ S K+   S    +             K++   EE +  SG   FAV+SPPPSSLPLP
Sbjct: 110 KANSPKKSPKSPTKKEE------------KKISPSEEADMFSGTAAFAVLSPPPSSLPLP 169

Query: 157 KFSLRPAKL--NCNVEAAGADDGAAAADDLRRLLRL 186
            F++RP  L   C  EAA A     A D+LRRLLRL
Sbjct: 170 TFTVRPKALISCCKAEAAAAGIDTGATDNLRRLLRL 191

BLAST of Cla007441 vs. NCBI nr
Match: gi|659133311|ref|XP_008466665.1| (PREDICTED: uncharacterized protein LOC103504021 [Cucumis melo])

HSP 1 Score: 294.3 bits (752), Expect = 1.5e-76
Identity = 154/193 (79.79%), Postives = 165/193 (85.49%), Query Frame = 1

Query: 1   MADSYFLDRPAATGYNPTRISNKFPLEN-TAVSGYTHGGLLQTPPRFLSAPSFHSHQFYP 60
           MAD YFLDR  +TG+N TRI+N F LEN  AVSGY+HGGLLQTPPRFLSAPSFH+HQ YP
Sbjct: 1   MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQPPPLLPP----PSTLRPHRSLPSQPRFHSLKKSKSTKRDKDSAAAVDRRISSRT 120
           F QQ + PPLLPP    PS LRPHRSL SQPR HSLKKSKST+++KDSA  VDRRI SRT
Sbjct: 61  FFQQNKSPPLLPPPPTTPSNLRPHRSLHSQPRSHSLKKSKSTRKEKDSATVVDRRIPSRT 120

Query: 121 FSSA-AGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAK-LNCNVEAAGADDGA 180
            SSA A KRVVRVEELEKLSGC FA+ISPPPSSLPLPKFS+RPAK L CNVEAAGADDGA
Sbjct: 121 ISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCNVEAAGADDGA 180

Query: 181 AAADDLRRLLRLH 187
           AAADDLRRLLRLH
Sbjct: 181 AAADDLRRLLRLH 193

BLAST of Cla007441 vs. NCBI nr
Match: gi|700204913|gb|KGN60046.1| (hypothetical protein Csa_3G873260 [Cucumis sativus])

HSP 1 Score: 293.5 bits (750), Expect = 2.6e-76
Identity = 153/195 (78.46%), Postives = 164/195 (84.10%), Query Frame = 1

Query: 1   MADSYFLDRPAATGYNPTRISNKFPLEN-TAVSGYTHGGLLQTPPRFLSAPSFHSHQFYP 60
           MAD YFLDR  +TG+N TRISN F LEN  AVSG++HGGLLQTPPRFLSAPSFH+HQ YP
Sbjct: 1   MADPYFLDRSPSTGHNLTRISNHFHLENLAAVSGFSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQPPPLLPPP-----STLRPHRSLPSQPRFHSLKKSKSTKRDKDSAAAVDRRISSR 120
           F QQ + PPLLPPP     S +RPHRSLPSQPR HSLKKSKST+++KDSAA VDRRI SR
Sbjct: 61  FFQQNKSPPLLPPPPTPTQSNIRPHRSLPSQPRSHSLKKSKSTRKEKDSAAVVDRRIPSR 120

Query: 121 TFSS--AAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAK-LNCNVEAAGADD 180
           T SS  A  KRVVRVEELEKLSGC F VISPPPSSLPLPKFS+RPAK LNCNVEA G DD
Sbjct: 121 TISSAGAGAKRVVRVEELEKLSGCFFTVISPPPSSLPLPKFSMRPAKALNCNVEAVGVDD 180

Query: 181 GAAAADDLRRLLRLH 187
           GAAAADDLRRLLRLH
Sbjct: 181 GAAAADDLRRLLRLH 195

BLAST of Cla007441 vs. NCBI nr
Match: gi|359492270|ref|XP_003634392.1| (PREDICTED: uncharacterized protein LOC100249003 [Vitis vinifera])

HSP 1 Score: 102.8 bits (255), Expect = 6.5e-19
Identity = 87/204 (42.65%), Postives = 108/204 (52.94%), Query Frame = 1

Query: 16  NPTRISNKF---PLENTAVSGYTHGGLLQTPPRFLSAPSFHSHQ--FYPFIQQQQPPPL- 75
           NP R + +F   P EN + S   HGGLL  PP  LS+ SFHS    F      QQPP L 
Sbjct: 22  NPKRNNRRFISKPSENLSPSRNIHGGLLLAPPPSLSS-SFHSSALLFDHHPHHQQPPLLP 81

Query: 76  LPPPSTLR--PHRSLP----SQPRFHSL--KKSKSTKRDKDSAAAVDRRISSRTFSSAAG 135
           LP P T    P RS P    ++ R  SL  KKSK + R      +    IS  +  +A+ 
Sbjct: 82  LPVPKTYASLPPRSPPLNKKTKIRDQSLTPKKSKPSSRSPKKEDSKSTAISDGSVMAAST 141

Query: 136 KRV--------------------VRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLN 186
            R+                    + +E+L+K SG +F  +SPPPSSLPLPKFSLRP KL+
Sbjct: 142 NRLGPDPKDLPKDAVSRILTSGNIVIEDLDKFSGSVFT-LSPPPSSLPLPKFSLRP-KLS 201

BLAST of Cla007441 vs. NCBI nr
Match: gi|641866220|gb|KDO84905.1| (hypothetical protein CISIN_1g039600mg [Citrus sinensis])

HSP 1 Score: 94.0 bits (232), Expect = 3.0e-16
Identity = 76/194 (39.18%), Postives = 93/194 (47.94%), Query Frame = 1

Query: 36  HGGLLQTPPRF------LSAPSFHSHQFYPFIQQQQPPPLLPPPSTLRPHRSLPSQPR-- 95
           H G+L  PP        LS  ++H        QQQQPPPLLP P     H  LPS+ R  
Sbjct: 39  HRGILLAPPLTTYSYPPLSLDNYHQ-------QQQQPPPLLPLPI----HNPLPSRSRYP 98

Query: 96  ---------FHSLKKSKST-----KRDKDSAAA----VDRRISS---------------- 155
                      SL   KS      KR+ +S       +++ IS                 
Sbjct: 99  INRKSNRTRDQSLTPKKSNSKRPNKREDESKIELLKPIEKTISESFIVTSVNPSGPDPND 158

Query: 156 --RTFSSAAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLNCNVEAAGADD 186
             +  S      +V V++LEK SG LF V SPPPSSLPLPKF+LRP  ++CN EAAG D 
Sbjct: 159 LPKDVSKVLSAGIVAVKDLEKFSGSLFTV-SPPPSSLPLPKFALRPKPISCNAEAAGVD- 218

BLAST of Cla007441 vs. NCBI nr
Match: gi|568839428|ref|XP_006473686.1| (PREDICTED: uncharacterized protein LOC102611662 isoform X2 [Citrus sinensis])

HSP 1 Score: 94.0 bits (232), Expect = 3.0e-16
Identity = 76/194 (39.18%), Postives = 93/194 (47.94%), Query Frame = 1

Query: 36  HGGLLQTPPRF------LSAPSFHSHQFYPFIQQQQPPPLLPPPSTLRPHRSLPSQPR-- 95
           H G+L  PP        LS  ++H        QQQQPPPLLP P     H  LPS+ R  
Sbjct: 20  HRGILLAPPLTTYSYPPLSLDNYHQ-------QQQQPPPLLPLPI----HNPLPSRSRYP 79

Query: 96  ---------FHSLKKSKST-----KRDKDSAAA----VDRRISS---------------- 155
                      SL   KS      KR+ +S       +++ IS                 
Sbjct: 80  INRKSNRTRDQSLTPKKSNSKRPNKREDESKIELLKPIEKTISESFIVTSVNPSGPDPND 139

Query: 156 --RTFSSAAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLNCNVEAAGADD 186
             +  S      +V V++LEK SG LF V SPPPSSLPLPKF+LRP  ++CN EAAG D 
Sbjct: 140 LPKDVSKVLSAGIVAVKDLEKFSGSLFTV-SPPPSSLPLPKFALRPKPISCNAEAAGVD- 199

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LJ69_CUCSA1.8e-7678.46Uncharacterized protein OS=Cucumis sativus GN=Csa_3G873260 PE=4 SV=1[more]
F6H1M4_VITVI4.5e-1942.65Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14640 PE=4 SV=... [more]
A0A067H1W0_CITSI2.1e-1639.18Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039600mg PE=4 SV=1[more]
V4SL18_9ROSI2.7e-1639.18Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002425mg PE=4 SV=1[more]
A0A022REI2_ERYGU1.0e-1541.03Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014362mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659133311|ref|XP_008466665.1|1.5e-7679.79PREDICTED: uncharacterized protein LOC103504021 [Cucumis melo][more]
gi|700204913|gb|KGN60046.1|2.6e-7678.46hypothetical protein Csa_3G873260 [Cucumis sativus][more]
gi|359492270|ref|XP_003634392.1|6.5e-1942.65PREDICTED: uncharacterized protein LOC100249003 [Vitis vinifera][more]
gi|641866220|gb|KDO84905.1|3.0e-1639.18hypothetical protein CISIN_1g039600mg [Citrus sinensis][more]
gi|568839428|ref|XP_006473686.1|3.0e-1639.18PREDICTED: uncharacterized protein LOC102611662 isoform X2 [Citrus sinensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU49017watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla007441Cla007441.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU49017WMU49017transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33670FAMILY NOT NAMEDcoord: 16..185
score: 5.3
NoneNo IPR availablePANTHERPTHR33670:SF2SUBFAMILY NOT NAMEDcoord: 16..185
score: 5.3