CmaCh01G019820 (gene) Cucurbita maxima (Rimu)

NameCmaCh01G019820
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr01 : 12752059 .. 12752571 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATCCTTATTTTCTAGGTCGAACGAACACTTCCGGCTATAAGCCAACCAGAGTTTCAAACGAGTTTCACCTTCAAAATGCCGCCGTCTCCGGTGGCAGCCACGGCGGACTTTTGCAAACGCCACCACGATTCTTCTCAGTTCCATCAATCCACAGCCACCAGCTTCTCCCCTTCATCCAACAACAACAACAACAACAACAACCACCGCCTCTTCTCACACCGCCGCCGATTCTACGGCCCCACCGCACTCTTTCTTCTCAACCCCGGTCATCCCACTCTCTTAAGAAATCCAAATCAATCAAAAGAGACAAAGACTCGCCGGCGGTGGTTGATCGGCGGGTTCCTTCCAGAACCTTCTCCTCGCCGGCGGCGGCAAAGAGGGTGGTTAGAGTTGAGGAGTTTGACAAATTGTCGGGGTGTTTGTTTGCGGTTATTTCTCCGCCGCCCAGCAGCTTGCCGTTGCCCAAATTTTGTCTGAGGCCGGCGAAGCTCAATTGTAATGCGTAG

mRNA sequence

ATGGCGGATCCTTATTTTCTAGGTCGAACGAACACTTCCGGCTATAAGCCAACCAGAGTTTCAAACGAGTTTCACCTTCAAAATGCCGCCGTCTCCGGTGGCAGCCACGGCGGACTTTTGCAAACGCCACCACGATTCTTCTCAGTTCCATCAATCCACAGCCACCAGCTTCTCCCCTTCATCCAACAACAACAACAACAACAACAACCACCGCCTCTTCTCACACCGCCGCCGATTCTACGGCCCCACCGCACTCTTTCTTCTCAACCCCGGTCATCCCACTCTCTTAAGAAATCCAAATCAATCAAAAGAGACAAAGACTCGCCGGCGGTGGTTGATCGGCGGGTTCCTTCCAGAACCTTCTCCTCGCCGGCGGCGGCAAAGAGGGTGGTTAGAGTTGAGGAGTTTGACAAATTGTCGGGGTGTTTGTTTGCGGTTATTTCTCCGCCGCCCAGCAGCTTGCCGTTGCCCAAATTTTGTCTGAGGCCGGCGAAGCTCAATTGTAATGCGTAG

Coding sequence (CDS)

ATGGCGGATCCTTATTTTCTAGGTCGAACGAACACTTCCGGCTATAAGCCAACCAGAGTTTCAAACGAGTTTCACCTTCAAAATGCCGCCGTCTCCGGTGGCAGCCACGGCGGACTTTTGCAAACGCCACCACGATTCTTCTCAGTTCCATCAATCCACAGCCACCAGCTTCTCCCCTTCATCCAACAACAACAACAACAACAACAACCACCGCCTCTTCTCACACCGCCGCCGATTCTACGGCCCCACCGCACTCTTTCTTCTCAACCCCGGTCATCCCACTCTCTTAAGAAATCCAAATCAATCAAAAGAGACAAAGACTCGCCGGCGGTGGTTGATCGGCGGGTTCCTTCCAGAACCTTCTCCTCGCCGGCGGCGGCAAAGAGGGTGGTTAGAGTTGAGGAGTTTGACAAATTGTCGGGGTGTTTGTTTGCGGTTATTTCTCCGCCGCCCAGCAGCTTGCCGTTGCCCAAATTTTGTCTGAGGCCGGCGAAGCTCAATTGTAATGCGTAG

Protein sequence

MADPYFLGRTNTSGYKPTRVSNEFHLQNAAVSGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSLKKSKSIKRDKDSPAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPAKLNCNA
BLAST of CmaCh01G019820 vs. TrEMBL
Match: A0A0A0LJ69_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G873260 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.0e-54
Identity = 122/177 (68.93%), Postives = 138/177 (77.97%), Query Frame = 1

Query: 1   MADPYFLGRTNTSGYKPTRVSNEFHLQN-AAVSGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
           MADPYFL R+ ++G+  TR+SN FHL+N AAVSG SHGGLLQTPPRF S PS H+HQ  P
Sbjct: 1   MADPYFLDRSPSTGHNLTRISNHFHLENLAAVSGFSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQQQQQPPPLLTPPPI-----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSPAVVDR 120
           F QQ +     PPLL PPP      +RPHR+L SQPR SHSLKKSKS +++KDS AVVDR
Sbjct: 61  FFQQNKS----PPLLPPPPTPTQSNIRPHRSLPSQPR-SHSLKKSKSTRKEKDSAAVVDR 120

Query: 121 RVPSRTFSSP-AAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPAK-LNCN 170
           R+PSRT SS  A AKRVVRVEE +KLSGC F VISPPPSSLPLPKF +RPAK LNCN
Sbjct: 121 RIPSRTISSAGAGAKRVVRVEELEKLSGCFFTVISPPPSSLPLPKFSMRPAKALNCN 172

BLAST of CmaCh01G019820 vs. TrEMBL
Match: F6H1M4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14640 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-06
Identity = 65/171 (38.01%), Postives = 78/171 (45.61%), Query Frame = 1

Query: 27  QNAAVSGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQQQPPPLLTP--------PP 86
           +N + S   HGGLL  PP   S  S HS  LL         QQPP L  P        PP
Sbjct: 36  ENLSPSRNIHGGLLLAPPPSLS-SSFHSSALL--FDHHPHHQQPPLLPLPVPKTYASLPP 95

Query: 87  ILRPHRTLSSQPRSSHSLKKSKSIKR-----DKDSPAVVDRRV----PSRTFSSPA---- 146
              P    +     S + KKSK   R     D  S A+ D  V     +R    P     
Sbjct: 96  RSPPLNKKTKIRDQSLTPKKSKPSSRSPKKEDSKSTAISDGSVMAASTNRLGPDPKDLPK 155

Query: 147 -AAKRVVR-----VEEFDKLSGCLFAVISPPPSSLPLPKFCLRPAKLNCNA 171
            A  R++      +E+ DK SG +F  +SPPPSSLPLPKF LRP KL+CNA
Sbjct: 156 DAVSRILTSGNIVIEDLDKFSGSVFT-LSPPPSSLPLPKFSLRP-KLSCNA 201

BLAST of CmaCh01G019820 vs. TrEMBL
Match: A0A067H1W0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039600mg PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.3e-06
Identity = 57/168 (33.93%), Postives = 74/168 (44.05%), Query Frame = 1

Query: 36  HGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQQQPPPLLTPPPILRP------------- 95
           H G+L  PP      + +S+  L      QQQQQPPPLL P PI  P             
Sbjct: 39  HRGILLAPPL-----TTYSYPPLSLDNYHQQQQQPPPLL-PLPIHNPLPSRSRYPINRKS 98

Query: 96  --HRTLSSQPRSSHSLKKSKSIKRDKDSPAVVDRRVPSRTFS------------------ 155
              R  S  P+ S+S + +K     K        +  S +F                   
Sbjct: 99  NRTRDQSLTPKKSNSKRPNKREDESKIELLKPIEKTISESFIVTSVNPSGPDPNDLPKDV 158

Query: 156 SPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPAKLNCNA 171
           S   +  +V V++ +K SG LF V SPPPSSLPLPKF LRP  ++CNA
Sbjct: 159 SKVLSAGIVAVKDLEKFSGSLFTV-SPPPSSLPLPKFALRPKPISCNA 199

BLAST of CmaCh01G019820 vs. TrEMBL
Match: V4SL18_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002425mg PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.1e-06
Identity = 57/168 (33.93%), Postives = 74/168 (44.05%), Query Frame = 1

Query: 36  HGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQQQPPPLLTPPPILRP------------- 95
           H G+L  PP      + +S+  L      QQQQQPPPLL P PI  P             
Sbjct: 39  HRGILLAPPL-----TTYSYPPLSLDNYHQQQQQPPPLL-PLPIHNPLPSRSRYPINRKS 98

Query: 96  --HRTLSSQPRSSHSLKKSKSIKRDKDSPAVVDRRVPSRTFS------------------ 155
              R  S  P+ S+S + +K     K        +  S +F                   
Sbjct: 99  NRTRDQSLTPKKSNSKRPNKREDESKIELLKPIEKTISESFIVTSVNPSGPDPNDLPKDV 158

Query: 156 SPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPAKLNCNA 171
           S   +  +V V++ +K SG LF V SPPPSSLPLPKF LRP  ++CNA
Sbjct: 159 SKVLSAGIVAVKDLEKFSGSLFTV-SPPPSSLPLPKFALRPKLISCNA 199

BLAST of CmaCh01G019820 vs. TrEMBL
Match: A0A022REI2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014362mg PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.0e-06
Identity = 53/135 (39.26%), Postives = 63/135 (46.67%), Query Frame = 1

Query: 37  GGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQQQPPPLLTPPPILRPH----RTLSSQPRS 96
           GGLLQ PP     P + SH   P+  Q QQ    PPLL  P          R LS  P +
Sbjct: 50  GGLLQPPPPSLRRPFLASHSYPPYSVQLQQ----PPLLPLPAAAHRRGAAARGLSCPPAA 109

Query: 97  SHSLKKSKSIKRDKDSPAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSG-CLFAVISPPP 156
           S   KK+ S K+   SP   +              K++   EE D  SG   FAV+SPPP
Sbjct: 110 S---KKANSPKKSPKSPTKKEE-------------KKISPSEEADMFSGTAAFAVLSPPP 164

Query: 157 SSLPLPKFCLRPAKL 167
           SSLPLP F +RP  L
Sbjct: 170 SSLPLPTFTVRPKAL 164

BLAST of CmaCh01G019820 vs. NCBI nr
Match: gi|659133311|ref|XP_008466665.1| (PREDICTED: uncharacterized protein LOC103504021 [Cucumis melo])

HSP 1 Score: 221.5 bits (563), Expect = 1.1e-54
Identity = 120/175 (68.57%), Postives = 137/175 (78.29%), Query Frame = 1

Query: 1   MADPYFLGRTNTSGYKPTRVSNEFHLQN-AAVSGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
           MADPYFL R+ ++G+  TR++N FHL+N AAVSG SHGGLLQTPPRF S PS H+HQ  P
Sbjct: 1   MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSPAVVDRR 120
           F QQ +     PPLL PPP     LRPHR+L SQPRS HSLKKSKS +++KDS  VVDRR
Sbjct: 61  FFQQNKS----PPLLPPPPTTPSNLRPHRSLHSQPRS-HSLKKSKSTRKEKDSATVVDRR 120

Query: 121 VPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPAK-LNCN 170
           +PSRT SS  AAKRVVRVEE +KLSGC FA+ISPPPSSLPLPKF +RPAK L CN
Sbjct: 121 IPSRTISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCN 170

BLAST of CmaCh01G019820 vs. NCBI nr
Match: gi|700204913|gb|KGN60046.1| (hypothetical protein Csa_3G873260 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 4.3e-54
Identity = 122/177 (68.93%), Postives = 138/177 (77.97%), Query Frame = 1

Query: 1   MADPYFLGRTNTSGYKPTRVSNEFHLQN-AAVSGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
           MADPYFL R+ ++G+  TR+SN FHL+N AAVSG SHGGLLQTPPRF S PS H+HQ  P
Sbjct: 1   MADPYFLDRSPSTGHNLTRISNHFHLENLAAVSGFSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQQQQQPPPLLTPPPI-----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSPAVVDR 120
           F QQ +     PPLL PPP      +RPHR+L SQPR SHSLKKSKS +++KDS AVVDR
Sbjct: 61  FFQQNKS----PPLLPPPPTPTQSNIRPHRSLPSQPR-SHSLKKSKSTRKEKDSAAVVDR 120

Query: 121 RVPSRTFSSP-AAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPAK-LNCN 170
           R+PSRT SS  A AKRVVRVEE +KLSGC F VISPPPSSLPLPKF +RPAK LNCN
Sbjct: 121 RIPSRTISSAGAGAKRVVRVEELEKLSGCFFTVISPPPSSLPLPKFSMRPAKALNCN 172

BLAST of CmaCh01G019820 vs. NCBI nr
Match: gi|359492270|ref|XP_003634392.1| (PREDICTED: uncharacterized protein LOC100249003 [Vitis vinifera])

HSP 1 Score: 60.8 bits (146), Expect = 2.6e-06
Identity = 65/171 (38.01%), Postives = 78/171 (45.61%), Query Frame = 1

Query: 27  QNAAVSGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQQQPPPLLTP--------PP 86
           +N + S   HGGLL  PP   S  S HS  LL         QQPP L  P        PP
Sbjct: 36  ENLSPSRNIHGGLLLAPPPSLS-SSFHSSALL--FDHHPHHQQPPLLPLPVPKTYASLPP 95

Query: 87  ILRPHRTLSSQPRSSHSLKKSKSIKR-----DKDSPAVVDRRV----PSRTFSSPA---- 146
              P    +     S + KKSK   R     D  S A+ D  V     +R    P     
Sbjct: 96  RSPPLNKKTKIRDQSLTPKKSKPSSRSPKKEDSKSTAISDGSVMAASTNRLGPDPKDLPK 155

Query: 147 -AAKRVVR-----VEEFDKLSGCLFAVISPPPSSLPLPKFCLRPAKLNCNA 171
            A  R++      +E+ DK SG +F  +SPPPSSLPLPKF LRP KL+CNA
Sbjct: 156 DAVSRILTSGNIVIEDLDKFSGSVFT-LSPPPSSLPLPKFSLRP-KLSCNA 201

BLAST of CmaCh01G019820 vs. NCBI nr
Match: gi|568839428|ref|XP_006473686.1| (PREDICTED: uncharacterized protein LOC102611662 isoform X2 [Citrus sinensis])

HSP 1 Score: 60.5 bits (145), Expect = 3.4e-06
Identity = 57/168 (33.93%), Postives = 74/168 (44.05%), Query Frame = 1

Query: 36  HGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQQQPPPLLTPPPILRP------------- 95
           H G+L  PP      + +S+  L      QQQQQPPPLL P PI  P             
Sbjct: 20  HRGILLAPPL-----TTYSYPPLSLDNYHQQQQQPPPLL-PLPIHNPLPSRSRYPINRKS 79

Query: 96  --HRTLSSQPRSSHSLKKSKSIKRDKDSPAVVDRRVPSRTFS------------------ 155
              R  S  P+ S+S + +K     K        +  S +F                   
Sbjct: 80  NRTRDQSLTPKKSNSKRPNKREDESKIELLKPIEKTISESFIVTSVNPSGPDPNDLPKDV 139

Query: 156 SPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPAKLNCNA 171
           S   +  +V V++ +K SG LF V SPPPSSLPLPKF LRP  ++CNA
Sbjct: 140 SKVLSAGIVAVKDLEKFSGSLFTV-SPPPSSLPLPKFALRPKPISCNA 180

BLAST of CmaCh01G019820 vs. NCBI nr
Match: gi|641866220|gb|KDO84905.1| (hypothetical protein CISIN_1g039600mg [Citrus sinensis])

HSP 1 Score: 60.5 bits (145), Expect = 3.4e-06
Identity = 57/168 (33.93%), Postives = 74/168 (44.05%), Query Frame = 1

Query: 36  HGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQQQPPPLLTPPPILRP------------- 95
           H G+L  PP      + +S+  L      QQQQQPPPLL P PI  P             
Sbjct: 39  HRGILLAPPL-----TTYSYPPLSLDNYHQQQQQPPPLL-PLPIHNPLPSRSRYPINRKS 98

Query: 96  --HRTLSSQPRSSHSLKKSKSIKRDKDSPAVVDRRVPSRTFS------------------ 155
              R  S  P+ S+S + +K     K        +  S +F                   
Sbjct: 99  NRTRDQSLTPKKSNSKRPNKREDESKIELLKPIEKTISESFIVTSVNPSGPDPNDLPKDV 158

Query: 156 SPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPAKLNCNA 171
           S   +  +V V++ +K SG LF V SPPPSSLPLPKF LRP  ++CNA
Sbjct: 159 SKVLSAGIVAVKDLEKFSGSLFTV-SPPPSSLPLPKFALRPKPISCNA 199

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LJ69_CUCSA3.0e-5468.93Uncharacterized protein OS=Cucumis sativus GN=Csa_3G873260 PE=4 SV=1[more]
F6H1M4_VITVI1.8e-0638.01Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14640 PE=4 SV=... [more]
A0A067H1W0_CITSI2.3e-0633.93Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039600mg PE=4 SV=1[more]
V4SL18_9ROSI3.1e-0633.93Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002425mg PE=4 SV=1[more]
A0A022REI2_ERYGU4.0e-0639.26Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014362mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659133311|ref|XP_008466665.1|1.1e-5468.57PREDICTED: uncharacterized protein LOC103504021 [Cucumis melo][more]
gi|700204913|gb|KGN60046.1|4.3e-5468.93hypothetical protein Csa_3G873260 [Cucumis sativus][more]
gi|359492270|ref|XP_003634392.1|2.6e-0638.01PREDICTED: uncharacterized protein LOC100249003 [Vitis vinifera][more]
gi|568839428|ref|XP_006473686.1|3.4e-0633.93PREDICTED: uncharacterized protein LOC102611662 isoform X2 [Citrus sinensis][more]
gi|641866220|gb|KDO84905.1|3.4e-0633.93hypothetical protein CISIN_1g039600mg [Citrus sinensis][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh01G019820.1CmaCh01G019820.1mRNA


The following gene(s) are paralogous to this gene:

None