ClCG05G015580 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G015580
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr05 : 27439283 .. 27439843 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATTCCTATTTTCTAGACCGACCGGCCGCCACCGGCTACAACCCCACCAGAATTTCAAATAAGTTTCCCCTTGAAAATACCGCTGTTTCTGGTTACACCCACGGCGGACTTTTGCAAACGCCGCCGCGGTTCCTCTCAGCTCCGTCATTCCACAGCCACCAATTTTACCCTTTCATCCAGCAACAACAACCACCGCCTCTCCTTCCGCCGCCGAGTACTCTACGGCCCCACCGCTCTCTTCCTTCTCAACCCCGATTCCACTCGCTTAAGAAATCCAAATCCACAAAAAGAGACAAAGACTCGGCGGCGGCGGTGGATCGGAGGATTTCTTCTAGAACCTTCTCGTCGGCGGCGGGGAAGAGGGTCGTTAGAGTTGAGGAATTGGAGAAATTGTCGGGGTGTTTATTTGCGGTTATTTCTCCGCCGCCCAGCAGTTTGCCGCTGCCCAAATTTTCTCTGAGGCCGGCGAAGCTTAATTGCAACGTGGAGGCTGCCGGAGCCGACGACGGAGCCGCCGCAGCGGACGATCTCCGGCGACTTCTTCGCCTTCACTGA

mRNA sequence

ATGGCCGATTCCTATTTTCTAGACCGACCGGCCGCCACCGGCTACAACCCCACCAGAATTTCAAATAAGTTTCCCCTTGAAAATACCGCTGTTTCTGGTTACACCCACGGCGGACTTTTGCAAACGCCGCCGCGGTTCCTCTCAGCTCCGTCATTCCACAGCCACCAATTTTACCCTTTCATCCAGCAACAACAACCACCGCCTCTCCTTCCGCCGCCGAGTACTCTACGGCCCCACCGCTCTCTTCCTTCTCAACCCCGATTCCACTCGCTTAAGAAATCCAAATCCACAAAAAGAGACAAAGACTCGGCGGCGGCGGTGGATCGGAGGATTTCTTCTAGAACCTTCTCGTCGGCGGCGGGGAAGAGGGTCGTTAGAGTTGAGGAATTGGAGAAATTGTCGGGGTGTTTATTTGCGGTTATTTCTCCGCCGCCCAGCAGTTTGCCGCTGCCCAAATTTTCTCTGAGGCCGGCGAAGCTTAATTGCAACGTGGAGGCTGCCGGAGCCGACGACGGAGCCGCCGCAGCGGACGATCTCCGGCGACTTCTTCGCCTTCACTGA

Coding sequence (CDS)

ATGGCCGATTCCTATTTTCTAGACCGACCGGCCGCCACCGGCTACAACCCCACCAGAATTTCAAATAAGTTTCCCCTTGAAAATACCGCTGTTTCTGGTTACACCCACGGCGGACTTTTGCAAACGCCGCCGCGGTTCCTCTCAGCTCCGTCATTCCACAGCCACCAATTTTACCCTTTCATCCAGCAACAACAACCACCGCCTCTCCTTCCGCCGCCGAGTACTCTACGGCCCCACCGCTCTCTTCCTTCTCAACCCCGATTCCACTCGCTTAAGAAATCCAAATCCACAAAAAGAGACAAAGACTCGGCGGCGGCGGTGGATCGGAGGATTTCTTCTAGAACCTTCTCGTCGGCGGCGGGGAAGAGGGTCGTTAGAGTTGAGGAATTGGAGAAATTGTCGGGGTGTTTATTTGCGGTTATTTCTCCGCCGCCCAGCAGTTTGCCGCTGCCCAAATTTTCTCTGAGGCCGGCGAAGCTTAATTGCAACGTGGAGGCTGCCGGAGCCGACGACGGAGCCGCCGCAGCGGACGATCTCCGGCGACTTCTTCGCCTTCACTGA

Protein sequence

MADSYFLDRPAATGYNPTRISNKFPLENTAVSGYTHGGLLQTPPRFLSAPSFHSHQFYPFIQQQQPPPLLPPPSTLRPHRSLPSQPRFHSLKKSKSTKRDKDSAAAVDRRISSRTFSSAAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLNCNVEAAGADDGAAAADDLRRLLRLH

Homology

[Close]

BLAST of ClCG05G015580 vs. TrEMBL
Match: A0A0A0LJ69_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G873260 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.8e-76
Identity = 153/195 (78.46%), Postives = 164/195 (84.10%), Query Frame = 1


Query: 1   MADSYFLDRPAATGYNPTRISNKFPLEN-TAVSGYTHGGLLQTPPRFLSAPSFHSHQFYP 60
           MAD YFLDR  +TG+N TRISN F LEN  AVSG++HGGLLQTPPRFLSAPSFH+HQ YP
Sbjct: 1   MADPYFLDRSPSTGHNLTRISNHFHLENLAAVSGFSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQPPPLLPPP-----STLRPHRSLPSQPRFHSLKKSKSTKRDKDSAAAVDRRISSR 120
           F QQ + PPLLPPP     S +RPHRSLPSQPR HSLKKSKST+++KDSAA VDRRI SR
Sbjct: 61  FFQQNKSPPLLPPPPTPTQSNIRPHRSLPSQPRSHSLKKSKSTRKEKDSAAVVDRRIPSR 120

Query: 121 TFSS--AAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAK-LNCNVEAAGADD 180
           T SS  A  KRVVRVEELEKLSGC F VISPPPSSLPLPKFS+RPAK LNCNVEA G DD
Sbjct: 121 TISSAGAGAKRVVRVEELEKLSGCFFTVISPPPSSLPLPKFSMRPAKALNCNVEAVGVDD 180

Query: 181 GAAAADDLRRLLRLH 187
           GAAAADDLRRLLRLH
Sbjct: 181 GAAAADDLRRLLRLH 195

[Close]

BLAST of ClCG05G015580 vs. TrEMBL
Match: F6H1M4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14640 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.5e-19
Identity = 87/204 (42.65%), Postives = 108/204 (52.94%), Query Frame = 1


Query: 16  NPTRISNKF---PLENTAVSGYTHGGLLQTPPRFLSAPSFHSHQ--FYPFIQQQQPPPL- 75
           NP R + +F   P EN + S   HGGLL  PP  LS+ SFHS    F      QQPP L 
Sbjct: 22  NPKRNNRRFISKPSENLSPSRNIHGGLLLAPPPSLSS-SFHSSALLFDHHPHHQQPPLLP 81

Query: 76  LPPPSTLR--PHRSLP----SQPRFHSL--KKSKSTKRDKDSAAAVDRRISSRTFSSAAG 135
           LP P T    P RS P    ++ R  SL  KKSK + R      +    IS  +  +A+ 
Sbjct: 82  LPVPKTYASLPPRSPPLNKKTKIRDQSLTPKKSKPSSRSPKKEDSKSTAISDGSVMAAST 141

Query: 136 KRV--------------------VRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLN 186
            R+                    + +E+L+K SG +F  +SPPPSSLPLPKFSLRP KL+
Sbjct: 142 NRLGPDPKDLPKDAVSRILTSGNIVIEDLDKFSGSVFT-LSPPPSSLPLPKFSLRP-KLS 201

[Close]

BLAST of ClCG05G015580 vs. TrEMBL
Match: A0A067H1W0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039600mg PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-16
Identity = 76/194 (39.18%), Postives = 93/194 (47.94%), Query Frame = 1


Query: 36  HGGLLQTPPRF------LSAPSFHSHQFYPFIQQQQPPPLLPPPSTLRPHRSLPSQPR-- 95
           H G+L  PP        LS  ++H        QQQQPPPLLP P     H  LPS+ R  
Sbjct: 39  HRGILLAPPLTTYSYPPLSLDNYHQ-------QQQQPPPLLPLPI----HNPLPSRSRYP 98

Query: 96  ---------FHSLKKSKST-----KRDKDSAAA----VDRRISS---------------- 155
                      SL   KS      KR+ +S       +++ IS                 
Sbjct: 99  INRKSNRTRDQSLTPKKSNSKRPNKREDESKIELLKPIEKTISESFIVTSVNPSGPDPND 158

Query: 156 --RTFSSAAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLNCNVEAAGADD 186
             +  S      +V V++LEK SG LF V SPPPSSLPLPKF+LRP  ++CN EAAG D 
Sbjct: 159 LPKDVSKVLSAGIVAVKDLEKFSGSLFTV-SPPPSSLPLPKFALRPKPISCNAEAAGVD- 218

[Close]

BLAST of ClCG05G015580 vs. TrEMBL
Match: V4SL18_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002425mg PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-16
Identity = 76/194 (39.18%), Postives = 93/194 (47.94%), Query Frame = 1


Query: 36  HGGLLQTPPRF------LSAPSFHSHQFYPFIQQQQPPPLLPPPSTLRPHRSLPSQPR-- 95
           H G+L  PP        LS  ++H        QQQQPPPLLP P     H  LPS+ R  
Sbjct: 39  HRGILLAPPLTTYSYPPLSLDNYHQ-------QQQQPPPLLPLPI----HNPLPSRSRYP 98

Query: 96  ---------FHSLKKSKST-----KRDKDSAAA----VDRRISS---------------- 155
                      SL   KS      KR+ +S       +++ IS                 
Sbjct: 99  INRKSNRTRDQSLTPKKSNSKRPNKREDESKIELLKPIEKTISESFIVTSVNPSGPDPND 158

Query: 156 --RTFSSAAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLNCNVEAAGADD 186
             +  S      +V V++LEK SG LF V SPPPSSLPLPKF+LRP  ++CN EAAG D 
Sbjct: 159 LPKDVSKVLSAGIVAVKDLEKFSGSLFTV-SPPPSSLPLPKFALRPKLISCNAEAAGVD- 218

[Close]

BLAST of ClCG05G015580 vs. TrEMBL
Match: A0A022REI2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014362mg PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-15
Identity = 64/156 (41.03%), Postives = 78/156 (50.00%), Query Frame = 1


Query: 37  GGLLQTPPRFLSAPSFHSHQFYPFIQQQQPPPLLPPPSTLRPH----RSLPSQPRFHSLK 96
           GGLLQ PP  L  P   SH + P+  Q Q PPLLP P+         R L   P   + K
Sbjct: 50  GGLLQPPPPSLRRPFLASHSYPPYSVQLQQPPLLPLPAAAHRRGAAARGLSCPPA--ASK 109

Query: 97  KSKSTKRDKDSAAAVDRRISSRTFSSAAGKRVVRVEELEKLSG-CLFAVISPPPSSLPLP 156
           K+ S K+   S    +             K++   EE +  SG   FAV+SPPPSSLPLP
Sbjct: 110 KANSPKKSPKSPTKKEE------------KKISPSEEADMFSGTAAFAVLSPPPSSLPLP 169

Query: 157 KFSLRPAKL--NCNVEAAGADDGAAAADDLRRLLRL 186
            F++RP  L   C  EAA A     A D+LRRLLRL
Sbjct: 170 TFTVRPKALISCCKAEAAAAGIDTGATDNLRRLLRL 191

[Close]

BLAST of ClCG05G015580 vs. TAIR10
Match: AT1G20070.1 (AT1G20070.1 unknown protein)

HSP 1 Score: 69.7 bits (169), Expect = 2.1e-12
Identity = 64/183 (34.97%), Postives = 88/183 (48.09%), Query Frame = 1


Query: 16  NPTRISNKFPLENTAVSGYTHGGLLQTPPRFLSAPSFHSHQFYPFIQQQQPPPLLPPP-- 75
           NP R S++  L  +       GG L  P    S  S+ S   YP       PPLLP P  
Sbjct: 22  NPKRRSSRGSLSRS-------GGSLALPLNPTS--SWGSSPAYPPPHSYSQPPLLPLPRV 81

Query: 76  --STLRPHRSLPSQPRFH---SLKKSKSTKRDKDS----AAAVDRRISSRTFSSAAGKRV 135
             ST+   R   S+PR +   SL +   TK   ++    A  ++    +RT S       
Sbjct: 82  NSSTVPLQRVNSSRPRVNNNSSLNRVAQTKAISETHMKKAEFIESARLTRTGSVPIQANQ 141

Query: 136 VR--VEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLNCNVEAAGADDGAAAADDLRRL 186
           +R   E  +   G    ++SPPPSSLP+P+FS++P KL CNVEAAG  D   A +++RR+
Sbjct: 142 LRDFPEGFDGYPGPAIMLLSPPPSSLPMPRFSIKP-KLRCNVEAAGKSD--VATNNIRRV 192

[Close]

BLAST of ClCG05G015580 vs. NCBI nr
Match: gi|659133311|ref|XP_008466665.1| (PREDICTED: uncharacterized protein LOC103504021 [Cucumis melo])

HSP 1 Score: 294.3 bits (752), Expect = 1.5e-76
Identity = 154/193 (79.79%), Postives = 165/193 (85.49%), Query Frame = 1


Query: 1   MADSYFLDRPAATGYNPTRISNKFPLEN-TAVSGYTHGGLLQTPPRFLSAPSFHSHQFYP 60
           MAD YFLDR  +TG+N TRI+N F LEN  AVSGY+HGGLLQTPPRFLSAPSFH+HQ YP
Sbjct: 1   MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQPPPLLPP----PSTLRPHRSLPSQPRFHSLKKSKSTKRDKDSAAAVDRRISSRT 120
           F QQ + PPLLPP    PS LRPHRSL SQPR HSLKKSKST+++KDSA  VDRRI SRT
Sbjct: 61  FFQQNKSPPLLPPPPTTPSNLRPHRSLHSQPRSHSLKKSKSTRKEKDSATVVDRRIPSRT 120

Query: 121 FSSA-AGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAK-LNCNVEAAGADDGA 180
            SSA A KRVVRVEELEKLSGC FA+ISPPPSSLPLPKFS+RPAK L CNVEAAGADDGA
Sbjct: 121 ISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCNVEAAGADDGA 180

Query: 181 AAADDLRRLLRLH 187
           AAADDLRRLLRLH
Sbjct: 181 AAADDLRRLLRLH 193

[Close]

BLAST of ClCG05G015580 vs. NCBI nr
Match: gi|700204913|gb|KGN60046.1| (hypothetical protein Csa_3G873260 [Cucumis sativus])

HSP 1 Score: 293.5 bits (750), Expect = 2.6e-76
Identity = 153/195 (78.46%), Postives = 164/195 (84.10%), Query Frame = 1


Query: 1   MADSYFLDRPAATGYNPTRISNKFPLEN-TAVSGYTHGGLLQTPPRFLSAPSFHSHQFYP 60
           MAD YFLDR  +TG+N TRISN F LEN  AVSG++HGGLLQTPPRFLSAPSFH+HQ YP
Sbjct: 1   MADPYFLDRSPSTGHNLTRISNHFHLENLAAVSGFSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQPPPLLPPP-----STLRPHRSLPSQPRFHSLKKSKSTKRDKDSAAAVDRRISSR 120
           F QQ + PPLLPPP     S +RPHRSLPSQPR HSLKKSKST+++KDSAA VDRRI SR
Sbjct: 61  FFQQNKSPPLLPPPPTPTQSNIRPHRSLPSQPRSHSLKKSKSTRKEKDSAAVVDRRIPSR 120

Query: 121 TFSS--AAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAK-LNCNVEAAGADD 180
           T SS  A  KRVVRVEELEKLSGC F VISPPPSSLPLPKFS+RPAK LNCNVEA G DD
Sbjct: 121 TISSAGAGAKRVVRVEELEKLSGCFFTVISPPPSSLPLPKFSMRPAKALNCNVEAVGVDD 180

Query: 181 GAAAADDLRRLLRLH 187
           GAAAADDLRRLLRLH
Sbjct: 181 GAAAADDLRRLLRLH 195

[Close]

BLAST of ClCG05G015580 vs. NCBI nr
Match: gi|359492270|ref|XP_003634392.1| (PREDICTED: uncharacterized protein LOC100249003 [Vitis vinifera])

HSP 1 Score: 102.8 bits (255), Expect = 6.5e-19
Identity = 87/204 (42.65%), Postives = 108/204 (52.94%), Query Frame = 1


Query: 16  NPTRISNKF---PLENTAVSGYTHGGLLQTPPRFLSAPSFHSHQ--FYPFIQQQQPPPL- 75
           NP R + +F   P EN + S   HGGLL  PP  LS+ SFHS    F      QQPP L 
Sbjct: 22  NPKRNNRRFISKPSENLSPSRNIHGGLLLAPPPSLSS-SFHSSALLFDHHPHHQQPPLLP 81

Query: 76  LPPPSTLR--PHRSLP----SQPRFHSL--KKSKSTKRDKDSAAAVDRRISSRTFSSAAG 135
           LP P T    P RS P    ++ R  SL  KKSK + R      +    IS  +  +A+ 
Sbjct: 82  LPVPKTYASLPPRSPPLNKKTKIRDQSLTPKKSKPSSRSPKKEDSKSTAISDGSVMAAST 141

Query: 136 KRV--------------------VRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLN 186
            R+                    + +E+L+K SG +F  +SPPPSSLPLPKFSLRP KL+
Sbjct: 142 NRLGPDPKDLPKDAVSRILTSGNIVIEDLDKFSGSVFT-LSPPPSSLPLPKFSLRP-KLS 201

[Close]

BLAST of ClCG05G015580 vs. NCBI nr
Match: gi|641866220|gb|KDO84905.1| (hypothetical protein CISIN_1g039600mg [Citrus sinensis])

HSP 1 Score: 94.0 bits (232), Expect = 3.0e-16
Identity = 76/194 (39.18%), Postives = 93/194 (47.94%), Query Frame = 1


Query: 36  HGGLLQTPPRF------LSAPSFHSHQFYPFIQQQQPPPLLPPPSTLRPHRSLPSQPR-- 95
           H G+L  PP        LS  ++H        QQQQPPPLLP P     H  LPS+ R  
Sbjct: 39  HRGILLAPPLTTYSYPPLSLDNYHQ-------QQQQPPPLLPLPI----HNPLPSRSRYP 98

Query: 96  ---------FHSLKKSKST-----KRDKDSAAA----VDRRISS---------------- 155
                      SL   KS      KR+ +S       +++ IS                 
Sbjct: 99  INRKSNRTRDQSLTPKKSNSKRPNKREDESKIELLKPIEKTISESFIVTSVNPSGPDPND 158

Query: 156 --RTFSSAAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLNCNVEAAGADD 186
             +  S      +V V++LEK SG LF V SPPPSSLPLPKF+LRP  ++CN EAAG D 
Sbjct: 159 LPKDVSKVLSAGIVAVKDLEKFSGSLFTV-SPPPSSLPLPKFALRPKPISCNAEAAGVD- 218

[Close]

BLAST of ClCG05G015580 vs. NCBI nr
Match: gi|568839428|ref|XP_006473686.1| (PREDICTED: uncharacterized protein LOC102611662 isoform X2 [Citrus sinensis])

HSP 1 Score: 94.0 bits (232), Expect = 3.0e-16
Identity = 76/194 (39.18%), Postives = 93/194 (47.94%), Query Frame = 1


Query: 36  HGGLLQTPPRF------LSAPSFHSHQFYPFIQQQQPPPLLPPPSTLRPHRSLPSQPR-- 95
           H G+L  PP        LS  ++H        QQQQPPPLLP P     H  LPS+ R  
Sbjct: 20  HRGILLAPPLTTYSYPPLSLDNYHQ-------QQQQPPPLLPLPI----HNPLPSRSRYP 79

Query: 96  ---------FHSLKKSKST-----KRDKDSAAA----VDRRISS---------------- 155
                      SL   KS      KR+ +S       +++ IS                 
Sbjct: 80  INRKSNRTRDQSLTPKKSNSKRPNKREDESKIELLKPIEKTISESFIVTSVNPSGPDPND 139

Query: 156 --RTFSSAAGKRVVRVEELEKLSGCLFAVISPPPSSLPLPKFSLRPAKLNCNVEAAGADD 186
             +  S      +V V++LEK SG LF V SPPPSSLPLPKF+LRP  ++CN EAAG D 
Sbjct: 140 LPKDVSKVLSAGIVAVKDLEKFSGSLFTV-SPPPSSLPLPKFALRPKPISCNAEAAGVD- 199

The following BLAST results are available for this feature:

BLAST of ClCG05G015580 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ69_CUCSA	1.8e-76	78.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G873260 PE=4 SV=1	[more]
F6H1M4_VITVI	4.5e-19	42.65	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14640 PE=4 SV=...	[more]
A0A067H1W0_CITSI	2.1e-16	39.18	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039600mg PE=4 SV=1	[more]
V4SL18_9ROSI	2.7e-16	39.18	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002425mg PE=4 SV=1	[more]
A0A022REI2_ERYGU	1.0e-15	41.03	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014362mg PE=4 SV=1	[more]

BLAST of ClCG05G015580 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20070.1	2.1e-12	34.97	unknown protein	[more]

BLAST of ClCG05G015580 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659133311\|ref\|XP_008466665.1\|	1.5e-76	79.79	PREDICTED: uncharacterized protein LOC103504021 [Cucumis melo]	[more]
gi\|700204913\|gb\|KGN60046.1\|	2.6e-76	78.46	hypothetical protein Csa_3G873260 [Cucumis sativus]	[more]
gi\|359492270\|ref\|XP_003634392.1\|	6.5e-19	42.65	PREDICTED: uncharacterized protein LOC100249003 [Vitis vinifera]	[more]
gi\|641866220\|gb\|KDO84905.1\|	3.0e-16	39.18	hypothetical protein CISIN_1g039600mg [Citrus sinensis]	[more]
gi\|568839428\|ref\|XP_006473686.1\|	3.0e-16	39.18	PREDICTED: uncharacterized protein LOC102611662 isoform X2 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G015580.1	ClCG05G015580.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33670	FAMILY NOT NAMED	coord: 16..185 score: 5.3
None	No IPR available	PANTHER	PTHR33670:SF2	SUBFAMILY NOT NAMED	coord: 16..185 score: 5.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G015580	Csa3G873260	Cucumber (Chinese Long) v2	cuwcgB236
ClCG05G015580	MELO3C003742	Melon (DHL92) v3.5.1	mewcgB332
ClCG05G015580	Cla007441	Watermelon (97103) v1	wcgwmB285
ClCG05G015580	Cla97C05G096630	Watermelon (97103) v2	wcgwmbB229
ClCG05G015580	Bhi09G001774	Wax gourd	wcgwgoB477
ClCG05G015580	CSPI03G43520	Wild cucumber (PI 183967)	cpiwcgB244
ClCG05G015580	CmaCh01G019820	Cucurbita maxima (Rimu)	cmawcgB415
ClCG05G015580	CmoCh01G020400	Cucurbita moschata (Rifu)	cmowcgB415
ClCG05G015580	Lsi04G017590	Bottle gourd (USVL1VR-Ls)	lsiwcgB290
ClCG05G015580	Cp4.1LG02g08090	Cucurbita pepo (Zucchini)	cpewcgB513
ClCG05G015580	MELO3C003742.2	Melon (DHL92) v3.6.1	medwcgB326
ClCG05G015580	Carg17208	Silver-seed gourd	carwcgB0921
ClCG05G015580	CsaV3_3G045970	Cucumber (Chinese Long) v3	cucwcgB243

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None