Csa5G410720 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATTCCAACCAGTTTTCCCCCAAAAGCCCACACTATTCTTCCCTTTCTTCCCATGCCATTTCCATCCCTCTCCCTCAACCCATTCCCGGACCGGAAGAACCCAACCCCGACGGAACCCACCGCTGCACACGACGACTTAGCGGCGGTTAAGGCAGCCGCATGGGCCTGGTACCAGCATGGGTCCGGCTCCGAATCCAAGCCGATGCGGGAATTCGGACTCACCAGGCCCATCACTGTCCCCAAGCCATCTCGCTACAGACTCGAAGCCACAAACCGAAGTGATCCAACTATTTTGATTCAGGACAAGTTACAAACACCTACTCCGCATACCAACTCTCTCCTCGACAGCTACGAAATTGCCAGCATTTCTAGACGGTTATCTGACCTTTTAGACCCCAATGATCGCAATAATTTTAGCCTTAGGAGCTTTGAATCTGAGATTATGGATCTAGGACGACAAATTGAGGGGAAAACCACGAAGCCCAACAAATTCAGTGGCTTATGGCGGTGGCGGAGGCGGAAACCGTCGTTGATGTGCGGGAAAATGGAGGATGTGGTTCTTGCCACCCAAAAACATCACCGCCGGCCCATGCCACGGTGGACCTAAGTTAGCTAAGCCCGCCCTAAGGTTAGTTAGTTCTTCACTCATCTGCCATTTTTGTGTTTTTACGTTAAAATTTTGGTTAAATGGTTACCTTAAATTTGATTGAAGTTTCAAACTTTTTAGCTTTAAATACTTCCGGTTGATATATTAATTTTGGTTAGAATACGTTACTTTATTAATCGTTTTAGTTTATGGTCTTTTAATAGGTCGGAATTTATGCCCATTTCTTAGGCGTTTTCTTGAGAGAAAAAAGAAATTGAGCTCGCTCTTAAAATCTAAAAATTATAAAGCATGTTTTCAAAAACCTATTCTTTCTTTTTATTTTTTTTAGTTTTTCAGAACTTTTTAAAATTTTTGCGAACATTATAGGAAGTAGACAATATGTATAAAAAAAAAAAATTTGAGAGAGAAGTAAGAGTTTTAGAAATTTAATTTTCAAATAAAAAAAACAACAAACAAAATAGTTATTATAAATGGGGTTATAGAAAATAAGCTTTTGGTTTCCATAACAATATTTTGCAAAATTTGTAAAATAATTTTTATACACAATTTACAAATTTTGGAGGTTTCAGTTTTGTTGGTCAACAGTTTGGTATGTTAATTGTATAAAAGAAAAAAAAAATAGTTAGATATTGAATACACATAATAGGAATAATAATTAAAATAAAATTAGTTACGTTAAAATATTGTTGGGTTGTTGGATTTTGTGAAGGAAAATTTTGGAATGGGCGAAAGGGCGAAAGGGCGAAAGGGCGGAAGGGCGAGGAGAGGGTGTGATTCCCCAATCGTCACATCGTGAAGCGGGGGAGTTAATACGGCCTTACAACATGTTAATTGTTAGGTATACTCATTTATTTTTGTATTTATTAACTTTACCACACAACAAACATCACATACCATTTCCTTTCTTACTCTCATTTTCAATCTCTTTTTCCCCTTTTCTTATCTACTCTCTAACACTA ATGCCATTTCCATCCCTCTCCCTCAACCCATTCCCGGACCGGAAGAACCCAACCCCGACGGAACCCACCGCTGCACACGACGACTTAGCGGCGGTTAAGGCAGCCGCATGGGCCTGGTACCAGCATGGGTCCGGCTCCGAATCCAAGCCGATGCGGGAATTCGGACTCACCAGGCCCATCACTGTCCCCAAGCCATCTCGCTACAGACTCGAAGCCACAAACCGAAGTGATCCAACTATTTTGATTCAGGACAAGTTACAAACACCTACTCCGCATACCAACTCTCTCCTCGACAGCTACGAAATTGCCAGCATTTCTAGACGGTTATCTGACCTTTTAGACCCCAATGATCGCAATAATTTTAGCCTTAGGAGCTTTGAATCTGAGATTATGGATCTAGGACGACAAATTGAGGGGAAAACCACGAAGCCCAACAAATTCAGTGGCTTATGGCGGTGGCGGAGGCGGAAACCGTCGTTGATGTGCGGGAAAATGGAGGATGTGGTTCTTGCCACCCAAAAACATCACCGCCGGCCCATGCCACGGTGGACCTAA ATGCCATTTCCATCCCTCTCCCTCAACCCATTCCCGGACCGGAAGAACCCAACCCCGACGGAACCCACCGCTGCACACGACGACTTAGCGGCGGTTAAGGCAGCCGCATGGGCCTGGTACCAGCATGGGTCCGGCTCCGAATCCAAGCCGATGCGGGAATTCGGACTCACCAGGCCCATCACTGTCCCCAAGCCATCTCGCTACAGACTCGAAGCCACAAACCGAAGTGATCCAACTATTTTGATTCAGGACAAGTTACAAACACCTACTCCGCATACCAACTCTCTCCTCGACAGCTACGAAATTGCCAGCATTTCTAGACGGTTATCTGACCTTTTAGACCCCAATGATCGCAATAATTTTAGCCTTAGGAGCTTTGAATCTGAGATTATGGATCTAGGACGACAAATTGAGGGGAAAACCACGAAGCCCAACAAATTCAGTGGCTTATGGCGGTGGCGGAGGCGGAAACCGTCGTTGATGTGCGGGAAAATGGAGGATGTGGTTCTTGCCACCCAAAAACATCACCGCCGGCCCATGCCACGGTGGACCTAA MPFPSLSLNPFPDRKNPTPTEPTAAHDDLAAVKAAAWAWYQHGSGSESKPMREFGLTRPITVPKPSRYRLEATNRSDPTILIQDKLQTPTPHTNSLLDSYEIASISRRLSDLLDPNDRNNFSLRSFESEIMDLGRQIEGKTTKPNKFSGLWRWRRRKPSLMCGKMEDVVLATQKHHRRPMPRWT*
BLAST of Csa5G410720 vs. TrEMBL
Match: A0A0A0KTL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G410720 PE=4 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 3.5e-104 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1
BLAST of Csa5G410720 vs. TrEMBL
Match: A0A067JPK1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22519 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 5.3e-20 Identity = 73/176 (41.48%), Postives = 95/176 (53.98%), Query Frame = 1
BLAST of Csa5G410720 vs. TrEMBL
Match: B9H3C3_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s08350g PE=4 SV=2) HSP 1 Score: 101.7 bits (252), Expect = 1.0e-18 Identity = 67/179 (37.43%), Postives = 95/179 (53.07%), Query Frame = 1
BLAST of Csa5G410720 vs. TrEMBL
Match: A0A0S3RZX4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G368800 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.1e-17 Identity = 56/121 (46.28%), Postives = 72/121 (59.50%), Query Frame = 1
BLAST of Csa5G410720 vs. TrEMBL
Match: A0A0L9U9H8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g261400 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.1e-17 Identity = 56/121 (46.28%), Postives = 72/121 (59.50%), Query Frame = 1
BLAST of Csa5G410720 vs. TAIR10
Match: AT5G37550.1 (AT5G37550.1 unknown protein) HSP 1 Score: 80.1 bits (196), Expect = 1.6e-15 Identity = 64/171 (37.43%), Postives = 85/171 (49.71%), Query Frame = 1
BLAST of Csa5G410720 vs. TAIR10
Match: AT1G66190.1 (AT1G66190.1 unknown protein) HSP 1 Score: 69.3 bits (168), Expect = 2.8e-12 Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = 1
BLAST of Csa5G410720 vs. NCBI nr
Match: gi|778708494|ref|XP_011656214.1| (PREDICTED: uncharacterized protein LOC105435673 [Cucumis sativus]) HSP 1 Score: 385.6 bits (989), Expect = 5.0e-104 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1
BLAST of Csa5G410720 vs. NCBI nr
Match: gi|802732586|ref|XP_012086428.1| (PREDICTED: uncharacterized protein LOC105645433 [Jatropha curcas]) HSP 1 Score: 107.5 bits (267), Expect = 2.6e-20 Identity = 74/178 (41.57%), Postives = 96/178 (53.93%), Query Frame = 1
BLAST of Csa5G410720 vs. NCBI nr
Match: gi|643712536|gb|KDP25797.1| (hypothetical protein JCGZ_22519 [Jatropha curcas]) HSP 1 Score: 105.9 bits (263), Expect = 7.6e-20 Identity = 73/176 (41.48%), Postives = 95/176 (53.98%), Query Frame = 1
BLAST of Csa5G410720 vs. NCBI nr
Match: gi|566165569|ref|XP_002305221.2| (hypothetical protein POPTR_0004s08350g, partial [Populus trichocarpa]) HSP 1 Score: 101.7 bits (252), Expect = 1.4e-18 Identity = 67/179 (37.43%), Postives = 95/179 (53.07%), Query Frame = 1
BLAST of Csa5G410720 vs. NCBI nr
Match: gi|920696007|gb|KOM39232.1| (hypothetical protein LR48_Vigan03g261400 [Vigna angularis]) HSP 1 Score: 98.2 bits (243), Expect = 1.6e-17 Identity = 56/121 (46.28%), Postives = 72/121 (59.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |