CmoCh04G024090 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G024090
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Tetratricopeptide repeat-like superfamily protein
Location	Cmo_Chr04 : 17934424 .. 17934960 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATTACCATCCTTCTCCTTCAACCACTTCCCCGACCGGAAGAACCCAACGCCGACACAACCCACCCTCGCCGCCGACGACTTAGCGGCGGAGAAGGCGGCGGCCTGGGCATGGTACCATCATGGGTCCGGCTCCGAATCCAAGCCCATGCGGGAATTCGGCCTCACCAGGCCCGTCTCTGTCCCCAAGCCCTCTCGCTACAGGCTCGAGGCCATAAGAATCGCCCAAACTTTCTTTCAGGACAATTCACAAACACCTTGTCTGCACAATTCTCTTCTCGACAGCTACGAAGTCGCGAGCATTTCTAGGCGCATATCTGACTTATTAGACCCCACTGATCGTAACAATTTTAGCCTTAGGAGCTTCGAATCTGAAATTTTGGATCTGGGTCGAGAAATTGAGAGGAAATCCACCAAGCCCAAGAAATTTGGAGCTTTCTGGCGCAGACGGTCGGTGATGTGCGGAAAAATTGAGGATGTGGCTATTGGCAGCCTCGTCCGGTCGCCGGGAAAACAACAGCAAAGGCCGACGTGA

mRNA sequence

ATGCCATTACCATCCTTCTCCTTCAACCACTTCCCCGACCGGAAGAACCCAACGCCGACACAACCCACCCTCGCCGCCGACGACTTAGCGGCGGAGAAGGCGGCGGCCTGGGCATGGTACCATCATGGGTCCGGCTCCGAATCCAAGCCCATGCGGGAATTCGGCCTCACCAGGCCCGTCTCTGTCCCCAAGCCCTCTCGCTACAGGCTCGAGGCCATAAGAATCGCCCAAACTTTCTTTCAGGACAATTCACAAACACCTTGTCTGCACAATTCTCTTCTCGACAGCTACGAAGTCGCGAGCATTTCTAGGCGCATATCTGACTTATTAGACCCCACTGATCGTAACAATTTTAGCCTTAGGAGCTTCGAATCTGAAATTTTGGATCTGGGTCGAGAAATTGAGAGGAAATCCACCAAGCCCAAGAAATTTGGAGCTTTCTGGCGCAGACGGTCGGTGATGTGCGGAAAAATTGAGGATGTGGCTATTGGCAGCCTCGTCCGGTCGCCGGGAAAACAACAGCAAAGGCCGACGTGA

Coding sequence (CDS)

ATGCCATTACCATCCTTCTCCTTCAACCACTTCCCCGACCGGAAGAACCCAACGCCGACACAACCCACCCTCGCCGCCGACGACTTAGCGGCGGAGAAGGCGGCGGCCTGGGCATGGTACCATCATGGGTCCGGCTCCGAATCCAAGCCCATGCGGGAATTCGGCCTCACCAGGCCCGTCTCTGTCCCCAAGCCCTCTCGCTACAGGCTCGAGGCCATAAGAATCGCCCAAACTTTCTTTCAGGACAATTCACAAACACCTTGTCTGCACAATTCTCTTCTCGACAGCTACGAAGTCGCGAGCATTTCTAGGCGCATATCTGACTTATTAGACCCCACTGATCGTAACAATTTTAGCCTTAGGAGCTTCGAATCTGAAATTTTGGATCTGGGTCGAGAAATTGAGAGGAAATCCACCAAGCCCAAGAAATTTGGAGCTTTCTGGCGCAGACGGTCGGTGATGTGCGGAAAAATTGAGGATGTGGCTATTGGCAGCCTCGTCCGGTCGCCGGGAAAACAACAGCAAAGGCCGACGTGA

Homology

[Close]

BLAST of CmoCh04G024090 vs. TrEMBL
Match: A0A0A0KTL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G410720 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 7.0e-62
Identity = 124/172 (72.09%), Postives = 137/172 (79.65%), Query Frame = 1


Query: 1   MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPV 60
           MP PS S N FPDRKNPTPT+PT A DDLAA KAAAWAWY HGSGSESKPMREFGLTRP+
Sbjct: 1   MPFPSLSLNPFPDRKNPTPTEPTAAHDDLAAVKAAAWAWYQHGSGSESKPMREFGLTRPI 60

Query: 61  SVPKPSRYRLEAIRIAQ--TFFQDNSQTPCLH-NSLLDSYEVASISRRISDLLDPTDRNN 120
           +VPKPSRYRLEA   +      QD  QTP  H NSLLDSYE+ASISRR+SDLLDP DRNN
Sbjct: 61  TVPKPSRYRLEATNRSDPTILIQDKLQTPTPHTNSLLDSYEIASISRRLSDLLDPNDRNN 120

Query: 121 FSLRSFESEILDLGREIERKSTKPKKFGAFWRRR----SVMCGKIEDVAIGS 166
           FSLRSFESEI+DLGR+IE K+TKP KF   WR R    S+MCGK+EDV + +
Sbjct: 121 FSLRSFESEIMDLGRQIEGKTTKPNKFSGLWRWRRRKPSLMCGKMEDVVLAT 172

[Close]

BLAST of CmoCh04G024090 vs. TrEMBL
Match: B9H3C3_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s08350g PE=4 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 2.9e-23
Identity = 78/184 (42.39%), Postives = 103/184 (55.98%), Query Frame = 1


Query: 3   LPSFS-FNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVS 62
           +PS + FN F ++K P     T   DDLA  KAAAWAWYHHGSGSE +P+ EF +TR   
Sbjct: 4   MPSITPFNIFMEKKKPKGGGST---DDLALVKAAAWAWYHHGSGSEGRPICEFDVTRTRQ 63

Query: 63  VPKPSRYRLEAIR-IAQTFFQDNSQTPC---LHNSLLDSYEVASISRRISDL-------- 122
            P+PSRY+LEA R + +      S+TP      NSLLD YEV SIS+++  L        
Sbjct: 64  APRPSRYKLEATRTMKEDTMGSGSETPSPIRTDNSLLDKYEVESISKQLDYLIESSSNRF 123

Query: 123 ----LDPTDRNNFSLRSFESEILDLGREIERKSTKPKKF-GAFWRRRSVMCGKIEDVAIG 169
               +D  D +  S+ S +S+    G + ++K  K K F   FW R SV+CG   DV   
Sbjct: 124 YGFKIDHLDHDQRSISSLDSDQTG-GMKQKKKDKKKKTFLQGFWPRHSVVCGTKGDVDTR 183

[Close]

BLAST of CmoCh04G024090 vs. TrEMBL
Match: A0A067ERS6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029448mg PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.0e-20
Identity = 65/183 (35.52%), Postives = 99/183 (54.10%), Query Frame = 1


Query: 1   MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPV 60
           MP+ + SFN F  +K P  +      D+LA  KAAAWAWY  GSGSE KPM +F + R  
Sbjct: 1   MPITTTSFNSFMAKKKPRSS-----TDELAVVKAAAWAWYQRGSGSEGKPMGDFDVARTR 60

Query: 61  SVP-KPSRYRLEAIRIAQ------TFFQDNSQTPCLHNSLLDSYEVASISRRISDLLDPT 120
            V  KPSRY+LEA+RI++         +D+      ++SLLD YE+ SIS+R   L++ +
Sbjct: 61  RVVYKPSRYKLEAMRISEQEEAQAAAAEDSISIDNTNHSLLDRYEIESISKRFDQLINSS 120

Query: 121 DRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQ 177
                   + +S     G  + +K +K +K   FW R +V+CG  +D  +   +    +Q
Sbjct: 121 TATKLLKNASQSSQRTNGLTMNKKKSKIRK--GFWPRHAVVCGTRQDAVMDPRIYGVSRQ 176

[Close]

BLAST of CmoCh04G024090 vs. TrEMBL
Match: V4SSV2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012847mg PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.0e-20
Identity = 65/183 (35.52%), Postives = 98/183 (53.55%), Query Frame = 1


Query: 1   MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPV 60
           MP+ + SFN F  +K P  +      D+LA  KAAAWAWY  GSGSE KPM +F + R  
Sbjct: 1   MPITTTSFNSFMAKKKPRSS-----TDELAVVKAAAWAWYQRGSGSEGKPMGDFDVARTR 60

Query: 61  SVP-KPSRYRLEAIRIAQ------TFFQDNSQTPCLHNSLLDSYEVASISRRISDLLDPT 120
            V  KPSRY+LEA+RI++         +D+      ++SLLD YE+ SIS+R   L++ +
Sbjct: 61  RVVYKPSRYKLEAMRISEQEEAQAAAAEDSISIDNTNHSLLDRYEIESISKRFDQLINSS 120

Query: 121 DRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQ 177
                   + +S     G  + +K +K  K   FW R +V+CG  +D  +   +    +Q
Sbjct: 121 TATKLLKNASQSSQRTNGLTMNKKKSKILK--GFWPRHAVVCGTRQDAVMDPRIYGVSRQ 176

[Close]

BLAST of CmoCh04G024090 vs. TrEMBL
Match: G7J8S2_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g065210 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.1e-18
Identity = 68/168 (40.48%), Postives = 93/168 (55.36%), Query Frame = 1


Query: 6   FSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSE-SKPMREFGLTRPVSVPK 65
           FS +   ++K     QP  + D+LA  KAAAWAWY HGS SE  K   EF +TR    P+
Sbjct: 6   FSLSSLMEKKRKP--QPQESRDELALVKAAAWAWYQHGSRSERKKSSNEFDVTRTQRSPR 65

Query: 66  PSRYRLEAIRIAQ-TFFQDNS---QTPCLHNSLLDSYEVASISRRISDLLDPTDRNNFSL 125
           PSRY+LEA+R+A+ T    N     T   + SLLD+YEV SISR+   L+D +++ +   
Sbjct: 66  PSRYKLEAMRMAEVTDLTCNGLEVGTIANNKSLLDTYEVQSISRQFDSLIDSSNKQHMDG 125

Query: 126 RSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVR 169
              +++  D  R I  K  +   F  FW R  V+CG   DV  GS +R
Sbjct: 126 NCAKND--DGNRRINNKK-RFINFKGFWSRNVVVCGGGNDVVHGSALR 168

[Close]

BLAST of CmoCh04G024090 vs. TAIR10
Match: AT5G37550.1 (AT5G37550.1 unknown protein)

HSP 1 Score: 71.2 bits (173), Expect = 7.1e-13
Identity = 59/177 (33.33%), Postives = 85/177 (48.02%), Query Frame = 1


Query: 27  DDLAAEKAAAWAWYHHGSGSESKP-MREFGLT-RPVSVPKPSRYRLEAIRI--------- 86
           D+LA  KAAAWAWY      E KP MREF L+ R +  P+PSRY+LEA +          
Sbjct: 50  DELATVKAAAWAWYQR---HEGKPMMREFDLSKRAIRTPRPSRYKLEANKTMILSENKVS 109

Query: 87  ---AQTFFQDNSQTPCLHNSLLDSYEVASISRRISDLLDPT-----DRNNFSLRSFESEI 146
              +  F + + +T    +SLLDSYE+ SIS+RI +   PT     D       +   + 
Sbjct: 110 KPHSNHFLRGDQETKL--SSLLDSYEIKSISKRIDEGSLPTIGFWNDHGQHYDHNMLQKK 169

Query: 147 LDLGREIERKSTKPKKFGAFWRRRSVM-----CGKIEDVAIGSLVR-SPGKQQQRPT 179
           L+   + E    K       W+   +M     CG+ +DV +G+  R  P  ++  PT
Sbjct: 170 LEYDSKQENGLVKKMSIRNLWKGMIMMAPRTVCGRSDDVDLGAYHRVGPRTKKVAPT 221

[Close]

BLAST of CmoCh04G024090 vs. TAIR10
Match: AT1G66190.1 (AT1G66190.1 unknown protein)

HSP 1 Score: 55.1 bits (131), Expect = 5.2e-08
Identity = 28/49 (57.14%), Postives = 34/49 (69.39%), Query Frame = 1


Query: 27 DDLAAEKAAAWAWYHHGSGSESKP-MREFGLTRPVSVPKPSRYRLEAIR 75
          DDLA  KAAAWAWY      E KP MREF +TR   +P+PSRY++EA +
Sbjct: 44 DDLAVVKAAAWAWYLR---KEGKPIMREFDVTRAQRIPRPSRYKIEATK 89

[Close]

BLAST of CmoCh04G024090 vs. NCBI nr
Match: gi|778708494|ref|XP_011656214.1| (PREDICTED: uncharacterized protein LOC105435673 [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 1.0e-61
Identity = 124/172 (72.09%), Postives = 137/172 (79.65%), Query Frame = 1


Query: 1   MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPV 60
           MP PS S N FPDRKNPTPT+PT A DDLAA KAAAWAWY HGSGSESKPMREFGLTRP+
Sbjct: 1   MPFPSLSLNPFPDRKNPTPTEPTAAHDDLAAVKAAAWAWYQHGSGSESKPMREFGLTRPI 60

Query: 61  SVPKPSRYRLEAIRIAQ--TFFQDNSQTPCLH-NSLLDSYEVASISRRISDLLDPTDRNN 120
           +VPKPSRYRLEA   +      QD  QTP  H NSLLDSYE+ASISRR+SDLLDP DRNN
Sbjct: 61  TVPKPSRYRLEATNRSDPTILIQDKLQTPTPHTNSLLDSYEIASISRRLSDLLDPNDRNN 120

Query: 121 FSLRSFESEILDLGREIERKSTKPKKFGAFWRRR----SVMCGKIEDVAIGS 166
           FSLRSFESEI+DLGR+IE K+TKP KF   WR R    S+MCGK+EDV + +
Sbjct: 121 FSLRSFESEIMDLGRQIEGKTTKPNKFSGLWRWRRRKPSLMCGKMEDVVLAT 172

[Close]

BLAST of CmoCh04G024090 vs. NCBI nr
Match: gi|566165569|ref|XP_002305221.2| (hypothetical protein POPTR_0004s08350g, partial [Populus trichocarpa])

HSP 1 Score: 116.7 bits (291), Expect = 4.1e-23
Identity = 78/184 (42.39%), Postives = 103/184 (55.98%), Query Frame = 1


Query: 3   LPSFS-FNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVS 62
           +PS + FN F ++K P     T   DDLA  KAAAWAWYHHGSGSE +P+ EF +TR   
Sbjct: 4   MPSITPFNIFMEKKKPKGGGST---DDLALVKAAAWAWYHHGSGSEGRPICEFDVTRTRQ 63

Query: 63  VPKPSRYRLEAIR-IAQTFFQDNSQTPC---LHNSLLDSYEVASISRRISDL-------- 122
            P+PSRY+LEA R + +      S+TP      NSLLD YEV SIS+++  L        
Sbjct: 64  APRPSRYKLEATRTMKEDTMGSGSETPSPIRTDNSLLDKYEVESISKQLDYLIESSSNRF 123

Query: 123 ----LDPTDRNNFSLRSFESEILDLGREIERKSTKPKKF-GAFWRRRSVMCGKIEDVAIG 169
               +D  D +  S+ S +S+    G + ++K  K K F   FW R SV+CG   DV   
Sbjct: 124 YGFKIDHLDHDQRSISSLDSDQTG-GMKQKKKDKKKKTFLQGFWPRHSVVCGTKGDVDTR 183

[Close]

BLAST of CmoCh04G024090 vs. NCBI nr
Match: gi|743916440|ref|XP_011002196.1| (PREDICTED: uncharacterized protein LOC105109260 [Populus euphratica])

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22
Identity = 78/182 (42.86%), Postives = 101/182 (55.49%), Query Frame = 1


Query: 3   LPSFS-FNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVS 62
           +PS + FN F ++K P     T   DDLA  KAAAWAWYHHGSGSE +P+ EF +TR   
Sbjct: 1   MPSITPFNIFMEKKKPKGGGST---DDLALAKAAAWAWYHHGSGSEGRPICEFDVTRTRH 60

Query: 63  VPKPSRYRLEAIRI-AQTFFQDNSQTPC---LHNSLLDSYEVASISRRISDLLDPT---- 122
            P+PSRY+LEA RI  +      S+TP      NSLLD YEV SIS+++  L++ +    
Sbjct: 61  APRPSRYKLEATRIMKEDAMGSGSETPSPIRTDNSLLDKYEVESISKQLDYLIESSSNRF 120

Query: 123 -----DRNNFSLRSFESEILDLGREIERKSTKPKK--FGAFWRRRSVMCGKIEDVAIGSL 169
                D  +   RS  S   D   E+++K  K KK     F  R SV+CG   DV   +L
Sbjct: 121 YGFKIDHLDHDQRSISSLDSDKTGEMKQKKDKKKKTFLQGFLLRHSVVCGTRGDVDTRAL 179

[Close]

BLAST of CmoCh04G024090 vs. NCBI nr
Match: gi|568857040|ref|XP_006482078.1| (PREDICTED: uncharacterized protein LOC102614743 [Citrus sinensis])

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-20
Identity = 65/183 (35.52%), Postives = 99/183 (54.10%), Query Frame = 1


Query: 1   MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPV 60
           MP+ + SFN F  +K P  +      D+LA  KAAAWAWY  GSGSE KPM +F + R  
Sbjct: 1   MPITTTSFNSFMAKKKPRSS-----TDELAVVKAAAWAWYQRGSGSEGKPMGDFDVARTR 60

Query: 61  SVP-KPSRYRLEAIRIAQ------TFFQDNSQTPCLHNSLLDSYEVASISRRISDLLDPT 120
            V  KPSRY+LEA+RI++         +D+      ++SLLD YE+ SIS+R   L++ +
Sbjct: 61  RVVYKPSRYKLEAMRISEQEEAQAAAAEDSISIDNTNHSLLDRYEIESISKRFDQLINSS 120

Query: 121 DRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQ 177
                   + +S     G  + +K +K +K   FW R +V+CG  +D  +   +    +Q
Sbjct: 121 TATKLLKNASQSSQRTNGLTMNKKKSKIRK--GFWPRHAVVCGTRQDAVMDPRIYGVSRQ 176

[Close]

BLAST of CmoCh04G024090 vs. NCBI nr
Match: gi|567875925|ref|XP_006430552.1| (hypothetical protein CICLE_v10012847mg [Citrus clementina])

HSP 1 Score: 106.7 bits (265), Expect = 4.3e-20
Identity = 65/183 (35.52%), Postives = 98/183 (53.55%), Query Frame = 1


Query: 1   MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPV 60
           MP+ + SFN F  +K P  +      D+LA  KAAAWAWY  GSGSE KPM +F + R  
Sbjct: 1   MPITTTSFNSFMAKKKPRSS-----TDELAVVKAAAWAWYQRGSGSEGKPMGDFDVARTR 60

Query: 61  SVP-KPSRYRLEAIRIAQ------TFFQDNSQTPCLHNSLLDSYEVASISRRISDLLDPT 120
            V  KPSRY+LEA+RI++         +D+      ++SLLD YE+ SIS+R   L++ +
Sbjct: 61  RVVYKPSRYKLEAMRISEQEEAQAAAAEDSISIDNTNHSLLDRYEIESISKRFDQLINSS 120

Query: 121 DRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQ 177
                   + +S     G  + +K +K  K   FW R +V+CG  +D  +   +    +Q
Sbjct: 121 TATKLLKNASQSSQRTNGLTMNKKKSKILK--GFWPRHAVVCGTRQDAVMDPRIYGVSRQ 176

The following BLAST results are available for this feature:

BLAST of CmoCh04G024090 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G024090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTL9_CUCSA	7.0e-62	72.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G410720 PE=4 SV=1	[more]
B9H3C3_POPTR	2.9e-23	42.39	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s08350g P...	[more]
A0A067ERS6_CITSI	1.0e-20	35.52	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029448mg PE=4 SV=1	[more]
V4SSV2_9ROSI	3.0e-20	35.52	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012847mg PE=4 SV=1	[more]
G7J8S2_MEDTR	2.1e-18	40.48	Uncharacterized protein OS=Medicago truncatula GN=MTR_3g065210 PE=4 SV=1	[more]

BLAST of CmoCh04G024090 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G37550.1	7.1e-13	33.33	unknown protein	[more]
AT1G66190.1	5.2e-08	57.14	unknown protein	[more]

BLAST of CmoCh04G024090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778708494\|ref\|XP_011656214.1\|	1.0e-61	72.09	PREDICTED: uncharacterized protein LOC105435673 [Cucumis sativus]	[more]
gi\|566165569\|ref\|XP_002305221.2\|	4.1e-23	42.39	hypothetical protein POPTR_0004s08350g, partial [Populus trichocarpa]	[more]
gi\|743916440\|ref\|XP_011002196.1\|	1.2e-22	42.86	PREDICTED: uncharacterized protein LOC105109260 [Populus euphratica]	[more]
gi\|568857040\|ref\|XP_006482078.1\|	1.5e-20	35.52	PREDICTED: uncharacterized protein LOC102614743 [Citrus sinensis]	[more]
gi\|567875925\|ref\|XP_006430552.1\|	4.3e-20	35.52	hypothetical protein CICLE_v10012847mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G024090.1	CmoCh04G024090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34665	FAMILY NOT NAMED	coord: 27..161 score: 1.4
None	No IPR available	PANTHER	PTHR34665:SF2	SUBFAMILY NOT NAMED	coord: 27..161 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G024090	Cucsa.034710	Cucumber (Gy14) v1	cgycmoB0019
CmoCh04G024090	CmaCh15G007330	Cucurbita maxima (Rimu)	cmacmoB309
CmoCh04G024090	CmaCh04G023060	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G024090	Cla019778	Watermelon (97103) v1	cmowmB667
CmoCh04G024090	Csa5G410720	Cucumber (Chinese Long) v2	cmocuB740
CmoCh04G024090	MELO3C022825	Melon (DHL92) v3.5.1	cmomeB626
CmoCh04G024090	ClCG03G008850	Watermelon (Charleston Gray)	cmowcgB647
CmoCh04G024090	CSPI05G14780	Wild cucumber (PI 183967)	cmocpiB749
CmoCh04G024090	Lsi09G009440	Bottle gourd (USVL1VR-Ls)	cmolsiB610
CmoCh04G024090	Cp4.1LG13g05250	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G024090	Cp4.1LG01g19950	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G024090	MELO3C022825.2	Melon (DHL92) v3.6.1	cmomedB715
CmoCh04G024090	CsaV3_5G023910	Cucumber (Chinese Long) v3	cmocucB0876
CmoCh04G024090	Cla97C03G060030	Watermelon (97103) v2	cmowmbB719
CmoCh04G024090	Bhi12G001088	Wax gourd	cmowgoB0822
CmoCh04G024090	CsGy5G014670	Cucumber (Gy14) v2	cgybcmoB654
CmoCh04G024090	Carg01474	Silver-seed gourd	carcmoB1121
CmoCh04G024090	Carg18258	Silver-seed gourd	carcmoB0716

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G024090	CmoCh15G007560	Cucurbita moschata (Rifu)	cmocmoB262

The following block(s) are covering this gene:

None