CmoCh15G007560 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCATTGCCGGCATCCATCTCCCTCTGCCCAATCCCCCCGACGGAACCGACCACCGATGACTTAGCGGCGGTGAAGGCAGCGGCATGGGCCTGGTACCAGCATGGGTCCGGCTCCGATTCCAAGCCCATGCGCGAATTCGGCCTGACAAGGCCCACTACACACCCCAAGCCCTCTCGCTACAGGCTCGAGGCCGTCAGACGCTCCCAAACACCCTCTCTACTCGACAGCTACGAAGTCGCCAGCATTTCACGGCGGTTATCCGATCTCCTGGACCCCACTGATCGGAATAATTTTAGCCTCAGGAGCTTTGAATCTGAACTTTTGGATCTGGGTCGACAAATTGAAAGGAAGACCACGAAGCCCAAGAAGTTTAGAACAGGTTTGTGGCGGCGGAGACCGTCGGTGATGTGTGGCAAACTGGAGGATGTGGTCGTTGGCACTCTCGTCCATCCGCCCGGAAAACAACCGCGCCGGAGCACCGCCGGTCATGATCATTAA ATGCCATTGCCGGCATCCATCTCCCTCTGCCCAATCCCCCCGACGGAACCGACCACCGATGACTTAGCGGCGGTGAAGGCAGCGGCATGGGCCTGGTACCAGCATGGGTCCGGCTCCGATTCCAAGCCCATGCGCGAATTCGGCCTGACAAGGCCCACTACACACCCCAAGCCCTCTCGCTACAGGCTCGAGGCCGTCAGACGCTCCCAAACACCCTCTCTACTCGACAGCTACGAAGTCGCCAGCATTTCACGGCGGTTATCCGATCTCCTGGACCCCACTGATCGGAATAATTTTAGCCTCAGGAGCTTTGAATCTGAACTTTTGGATCTGGGTCGACAAATTGAAAGGAAGACCACGAAGCCCAAGAAGTTTAGAACAGGTTTGTGGCGGCGGAGACCGTCGGTGATGTGTGGCAAACTGGAGGATGTGGTCGTTGGCACTCTCGTCCATCCGCCCGGAAAACAACCGCGCCGGAGCACCGCCGGTCATGATCATTAA ATGCCATTGCCGGCATCCATCTCCCTCTGCCCAATCCCCCCGACGGAACCGACCACCGATGACTTAGCGGCGGTGAAGGCAGCGGCATGGGCCTGGTACCAGCATGGGTCCGGCTCCGATTCCAAGCCCATGCGCGAATTCGGCCTGACAAGGCCCACTACACACCCCAAGCCCTCTCGCTACAGGCTCGAGGCCGTCAGACGCTCCCAAACACCCTCTCTACTCGACAGCTACGAAGTCGCCAGCATTTCACGGCGGTTATCCGATCTCCTGGACCCCACTGATCGGAATAATTTTAGCCTCAGGAGCTTTGAATCTGAACTTTTGGATCTGGGTCGACAAATTGAAAGGAAGACCACGAAGCCCAAGAAGTTTAGAACAGGTTTGTGGCGGCGGAGACCGTCGGTGATGTGTGGCAAACTGGAGGATGTGGTCGTTGGCACTCTCGTCCATCCGCCCGGAAAACAACCGCGCCGGAGCACCGCCGGTCATGATCATTAA
BLAST of CmoCh15G007560 vs. TrEMBL
Match: A0A0A0KTL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G410720 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 1.7e-54 Identity = 127/184 (69.02%), Postives = 137/184 (74.46%), Query Frame = 1
BLAST of CmoCh15G007560 vs. TrEMBL
Match: B9H3C3_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s08350g PE=4 SV=2) HSP 1 Score: 104.4 bits (259), Expect = 1.4e-19 Identity = 69/161 (42.86%), Postives = 88/161 (54.66%), Query Frame = 1
BLAST of CmoCh15G007560 vs. TrEMBL
Match: A0A067JPK1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22519 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.9e-17 Identity = 64/150 (42.67%), Postives = 86/150 (57.33%), Query Frame = 1
BLAST of CmoCh15G007560 vs. TrEMBL
Match: A0A0R0GPZ9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G213100 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.8e-17 Identity = 63/149 (42.28%), Postives = 78/149 (52.35%), Query Frame = 1
BLAST of CmoCh15G007560 vs. TrEMBL
Match: A0A0B2S5I9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_016859 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.8e-17 Identity = 63/149 (42.28%), Postives = 78/149 (52.35%), Query Frame = 1
BLAST of CmoCh15G007560 vs. TAIR10
Match: AT5G37550.1 (AT5G37550.1 unknown protein) HSP 1 Score: 67.8 bits (164), Expect = 7.3e-12 Identity = 55/160 (34.38%), Postives = 75/160 (46.88%), Query Frame = 1
BLAST of CmoCh15G007560 vs. TAIR10
Match: AT1G66190.1 (AT1G66190.1 unknown protein) HSP 1 Score: 57.8 bits (138), Expect = 7.5e-09 Identity = 40/96 (41.67%), Postives = 51/96 (53.12%), Query Frame = 1
BLAST of CmoCh15G007560 vs. NCBI nr
Match: gi|778708494|ref|XP_011656214.1| (PREDICTED: uncharacterized protein LOC105435673 [Cucumis sativus]) HSP 1 Score: 220.3 bits (560), Expect = 2.5e-54 Identity = 127/184 (69.02%), Postives = 137/184 (74.46%), Query Frame = 1
BLAST of CmoCh15G007560 vs. NCBI nr
Match: gi|566165569|ref|XP_002305221.2| (hypothetical protein POPTR_0004s08350g, partial [Populus trichocarpa]) HSP 1 Score: 104.4 bits (259), Expect = 2.0e-19 Identity = 69/161 (42.86%), Postives = 88/161 (54.66%), Query Frame = 1
BLAST of CmoCh15G007560 vs. NCBI nr
Match: gi|743916440|ref|XP_011002196.1| (PREDICTED: uncharacterized protein LOC105109260 [Populus euphratica]) HSP 1 Score: 97.8 bits (242), Expect = 1.9e-17 Identity = 67/161 (41.61%), Postives = 85/161 (52.80%), Query Frame = 1
BLAST of CmoCh15G007560 vs. NCBI nr
Match: gi|950990246|ref|XP_014504289.1| (PREDICTED: uncharacterized protein LOC106764529 [Vigna radiata var. radiata]) HSP 1 Score: 97.1 bits (240), Expect = 3.2e-17 Identity = 60/143 (41.96%), Postives = 80/143 (55.94%), Query Frame = 1
BLAST of CmoCh15G007560 vs. NCBI nr
Match: gi|643712536|gb|KDP25797.1| (hypothetical protein JCGZ_22519 [Jatropha curcas]) HSP 1 Score: 96.7 bits (239), Expect = 4.1e-17 Identity = 64/150 (42.67%), Postives = 86/150 (57.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |