Cp4.1LG01g19950 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g19950
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Tetratricopeptide repeat-like superfamily protein
Location	Cp4.1LG01 : 17081077 .. 17081613 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATTACCATCCTTCTCCTTCAACCCCTTCCCCGACCGGAAGAGCCCAACGCCGACACAACCCACCGTCGCCGCCGACGACTTAGCGGCGGAGAAGGCGGCGGCCTGGGCATGGTACCATCATGGGTCCGGCTCCGAATCCAAGCCCATGCGGGAATTCGGCCTCACCAGGCCCGTCTCTGTCCCCAAGCCCTCTCGCTACAGGCTCGAGGCCATAAGAATCGCCCAAAATTTCTTTCAGGACAATTCACAAACACCTTGTCTGCATAATTCTCTTCTCGACAGCTACGAAGTCGCGAGCATTTCTAGGCGCATATCTGACTTACTAGACCCCACTGATCGTAACAATTTTAGCCTTAGGAGCTTCGAATCTGAAATTTTGGATCTGGGTCGAGAAATTGAGAGGAAATCCACCAAGCCCAAGAAATTTGGAGGCTTTTGGCGCAGACGGTCCGTGATGTGCGGCAAAATTGAGGATGTGGCTATTGGCAGCCTCGTCCGGCCGCCGGGAAAACAACAGCAAAGGCCGACATGA

mRNA sequence

ATGCCATTACCATCCTTCTCCTTCAACCCCTTCCCCGACCGGAAGAGCCCAACGCCGACACAACCCACCGTCGCCGCCGACGACTTAGCGGCGGAGAAGGCGGCGGCCTGGGCATGGTACCATCATGGGTCCGGCTCCGAATCCAAGCCCATGCGGGAATTCGGCCTCACCAGGCCCGTCTCTGTCCCCAAGCCCTCTCGCTACAGGCTCGAGGCCATAAGAATCGCCCAAAATTTCTTTCAGGACAATTCACAAACACCTTGTCTGCATAATTCTCTTCTCGACAGCTACGAAGTCGCGAGCATTTCTAGGCGCATATCTGACTTACTAGACCCCACTGATCGTAACAATTTTAGCCTTAGGAGCTTCGAATCTGAAATTTTGGATCTGGGTCGAGAAATTGAGAGGAAATCCACCAAGCCCAAGAAATTTGGAGGCTTTTGGCGCAGACGGTCCGTGATGTGCGGCAAAATTGAGGATGTGGCTATTGGCAGCCTCGTCCGGCCGCCGGGAAAACAACAGCAAAGGCCGACATGA

Coding sequence (CDS)

ATGCCATTACCATCCTTCTCCTTCAACCCCTTCCCCGACCGGAAGAGCCCAACGCCGACACAACCCACCGTCGCCGCCGACGACTTAGCGGCGGAGAAGGCGGCGGCCTGGGCATGGTACCATCATGGGTCCGGCTCCGAATCCAAGCCCATGCGGGAATTCGGCCTCACCAGGCCCGTCTCTGTCCCCAAGCCCTCTCGCTACAGGCTCGAGGCCATAAGAATCGCCCAAAATTTCTTTCAGGACAATTCACAAACACCTTGTCTGCATAATTCTCTTCTCGACAGCTACGAAGTCGCGAGCATTTCTAGGCGCATATCTGACTTACTAGACCCCACTGATCGTAACAATTTTAGCCTTAGGAGCTTCGAATCTGAAATTTTGGATCTGGGTCGAGAAATTGAGAGGAAATCCACCAAGCCCAAGAAATTTGGAGGCTTTTGGCGCAGACGGTCCGTGATGTGCGGCAAAATTGAGGATGTGGCTATTGGCAGCCTCGTCCGGCCGCCGGGAAAACAACAGCAAAGGCCGACATGA

Protein sequence

MPLPSFSFNPFPDRKSPTPTQPTVAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQNFFQDNSQTPCLHNSLLDSYEVASISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGGFWRRRSVMCGKIEDVAIGSLVRPPGKQQQRPT

Homology

[Close]

BLAST of Cp4.1LG01g19950 vs. TrEMBL
Match: A0A0A0KTL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G410720 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.4e-62
Identity = 125/172 (72.67%), Postives = 139/172 (80.81%), Query Frame = 1


Query: 1   MPLPSFSFNPFPDRKSPTPTQPTVAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPV 60
           MP PS S NPFPDRK+PTPT+PT A DDLAA KAAAWAWY HGSGSESKPMREFGLTRP+
Sbjct: 1   MPFPSLSLNPFPDRKNPTPTEPTAAHDDLAAVKAAAWAWYQHGSGSESKPMREFGLTRPI 60

Query: 61  SVPKPSRYRLEAIRIAQN--FFQDNSQTPCLH-NSLLDSYEVASISRRISDLLDPTDRNN 120
           +VPKPSRYRLEA   +      QD  QTP  H NSLLDSYE+ASISRR+SDLLDP DRNN
Sbjct: 61  TVPKPSRYRLEATNRSDPTILIQDKLQTPTPHTNSLLDSYEIASISRRLSDLLDPNDRNN 120

Query: 121 FSLRSFESEILDLGREIERKSTKPKKFGGFWRRR----SVMCGKIEDVAIGS 166
           FSLRSFESEI+DLGR+IE K+TKP KF G WR R    S+MCGK+EDV + +
Sbjct: 121 FSLRSFESEIMDLGRQIEGKTTKPNKFSGLWRWRRRKPSLMCGKMEDVVLAT 172

[Close]

BLAST of Cp4.1LG01g19950 vs. TrEMBL
Match: B9H3C3_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s08350g PE=4 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 7.6e-24
Identity = 79/184 (42.93%), Postives = 105/184 (57.07%), Query Frame = 1


Query: 3   LPSFS-FNPFPDRKSPTPTQPTVAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVS 62
           +PS + FN F ++K P     T   DDLA  KAAAWAWYHHGSGSE +P+ EF +TR   
Sbjct: 4   MPSITPFNIFMEKKKPKGGGST---DDLALVKAAAWAWYHHGSGSEGRPICEFDVTRTRQ 63

Query: 63  VPKPSRYRLEAIR-IAQNFFQDNSQTPC---LHNSLLDSYEVASISRRISDL-------- 122
            P+PSRY+LEA R + ++     S+TP      NSLLD YEV SIS+++  L        
Sbjct: 64  APRPSRYKLEATRTMKEDTMGSGSETPSPIRTDNSLLDKYEVESISKQLDYLIESSSNRF 123

Query: 123 ----LDPTDRNNFSLRSFESEILDLGREIERKSTKPKKF-GGFWRRRSVMCGKIEDVAIG 169
               +D  D +  S+ S +S+    G + ++K  K K F  GFW R SV+CG   DV   
Sbjct: 124 YGFKIDHLDHDQRSISSLDSDQTG-GMKQKKKDKKKKTFLQGFWPRHSVVCGTKGDVDTR 183

[Close]

BLAST of Cp4.1LG01g19950 vs. TrEMBL
Match: A0A067ERS6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029448mg PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.0e-20
Identity = 66/183 (36.07%), Postives = 100/183 (54.64%), Query Frame = 1


Query: 1   MPLPSFSFNPFPDRKSPTPTQPTVAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPV 60
           MP+ + SFN F  +K P  +      D+LA  KAAAWAWY  GSGSE KPM +F + R  
Sbjct: 1   MPITTTSFNSFMAKKKPRSS-----TDELAVVKAAAWAWYQRGSGSEGKPMGDFDVARTR 60

Query: 61  SVP-KPSRYRLEAIRIAQN------FFQDNSQTPCLHNSLLDSYEVASISRRISDLLDPT 120
            V  KPSRY+LEA+RI++         +D+      ++SLLD YE+ SIS+R   L++ +
Sbjct: 61  RVVYKPSRYKLEAMRISEQEEAQAAAAEDSISIDNTNHSLLDRYEIESISKRFDQLINSS 120

Query: 121 DRNNFSLRSFESEILDLGREIERKSTKPKKFGGFWRRRSVMCGKIEDVAIGSLVRPPGKQ 177
                   + +S     G  + +K +K +K  GFW R +V+CG  +D  +   +    +Q
Sbjct: 121 TATKLLKNASQSSQRTNGLTMNKKKSKIRK--GFWPRHAVVCGTRQDAVMDPRIYGVSRQ 176

[Close]

BLAST of Cp4.1LG01g19950 vs. TrEMBL
Match: V4SSV2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012847mg PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.0e-20
Identity = 66/183 (36.07%), Postives = 99/183 (54.10%), Query Frame = 1


Query: 1   MPLPSFSFNPFPDRKSPTPTQPTVAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPV 60
           MP+ + SFN F  +K P  +      D+LA  KAAAWAWY  GSGSE KPM +F + R  
Sbjct: 1   MPITTTSFNSFMAKKKPRSS-----TDELAVVKAAAWAWYQRGSGSEGKPMGDFDVARTR 60

Query: 61  SVP-KPSRYRLEAIRIAQN------FFQDNSQTPCLHNSLLDSYEVASISRRISDLLDPT 120
            V  KPSRY+LEA+RI++         +D+      ++SLLD YE+ SIS+R   L++ +
Sbjct: 61  RVVYKPSRYKLEAMRISEQEEAQAAAAEDSISIDNTNHSLLDRYEIESISKRFDQLINSS 120

Query: 121 DRNNFSLRSFESEILDLGREIERKSTKPKKFGGFWRRRSVMCGKIEDVAIGSLVRPPGKQ 177
                   + +S     G  + +K +K  K  GFW R +V+CG  +D  +   +    +Q
Sbjct: 121 TATKLLKNASQSSQRTNGLTMNKKKSKILK--GFWPRHAVVCGTRQDAVMDPRIYGVSRQ 176

[Close]

BLAST of Cp4.1LG01g19950 vs. TrEMBL
Match: V7B7W8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G237600g PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.4e-19
Identity = 66/165 (40.00%), Postives = 85/165 (51.52%), Query Frame = 1


Query: 4   PSFSFNPFPDRKSPTPTQPTVAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVP 63
           P  + NP P+   P P  P     DL   KAAAWAWY H SGS+ K + EF        P
Sbjct: 7   PKTNTNPNPN---PNPN-PNTNTKDLTFVKAAAWAWYQHNSGSKGKTITEFHAAVTRHDP 66

Query: 64  KPSRYRLEAIRIAQNFFQDNSQTPCLHNSLLDSYEVASISRRISDLLDPTDRNNFSLRSF 123
           +PSRY+LEA+R A    + +S       SLLD YEV SISRR++ L+   D N+   + F
Sbjct: 67  RPSRYKLEAMRAATEAGEGSSNIHAKKLSLLDEYEVQSISRRLNSLVQ--DSND---KPF 126

Query: 124 ESEILDLGREIERKSTKPKKFGGFWRRRSVMCGKIEDVAIGSLVR 169
             +     R  ++K  K K   GFW R   +CG  +DV   S VR
Sbjct: 127 NGDDNSANRRTQKKKMKKKVRKGFWVRHGAVCGGEKDVVDPSAVR 162

[Close]

BLAST of Cp4.1LG01g19950 vs. TAIR10
Match: AT5G37550.1 (AT5G37550.1 unknown protein)

HSP 1 Score: 72.4 bits (176), Expect = 3.2e-13
Identity = 59/177 (33.33%), Postives = 86/177 (48.59%), Query Frame = 1


Query: 27  DDLAAEKAAAWAWYHHGSGSESKP-MREFGLT-RPVSVPKPSRYRLEAIRI--------- 86
           D+LA  KAAAWAWY      E KP MREF L+ R +  P+PSRY+LEA +          
Sbjct: 50  DELATVKAAAWAWYQR---HEGKPMMREFDLSKRAIRTPRPSRYKLEANKTMILSENKVS 109

Query: 87  ---AQNFFQDNSQTPCLHNSLLDSYEVASISRRISDLLDPT-----DRNNFSLRSFESEI 146
              + +F + + +T    +SLLDSYE+ SIS+RI +   PT     D       +   + 
Sbjct: 110 KPHSNHFLRGDQETKL--SSLLDSYEIKSISKRIDEGSLPTIGFWNDHGQHYDHNMLQKK 169

Query: 147 LDLGREIERKSTKPKKFGGFWRRRSVM-----CGKIEDVAIGSLVR-PPGKQQQRPT 179
           L+   + E    K       W+   +M     CG+ +DV +G+  R  P  ++  PT
Sbjct: 170 LEYDSKQENGLVKKMSIRNLWKGMIMMAPRTVCGRSDDVDLGAYHRVGPRTKKVAPT 221

[Close]

BLAST of Cp4.1LG01g19950 vs. TAIR10
Match: AT1G66190.1 (AT1G66190.1 unknown protein)

HSP 1 Score: 55.1 bits (131), Expect = 5.2e-08
Identity = 28/49 (57.14%), Postives = 34/49 (69.39%), Query Frame = 1


Query: 27 DDLAAEKAAAWAWYHHGSGSESKP-MREFGLTRPVSVPKPSRYRLEAIR 75
          DDLA  KAAAWAWY      E KP MREF +TR   +P+PSRY++EA +
Sbjct: 44 DDLAVVKAAAWAWYLR---KEGKPIMREFDVTRAQRIPRPSRYKIEATK 89

[Close]

BLAST of Cp4.1LG01g19950 vs. NCBI nr
Match: gi|778708494|ref|XP_011656214.1| (PREDICTED: uncharacterized protein LOC105435673 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 2.0e-62
Identity = 125/172 (72.67%), Postives = 139/172 (80.81%), Query Frame = 1


Query: 1   MPLPSFSFNPFPDRKSPTPTQPTVAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPV 60
           MP PS S NPFPDRK+PTPT+PT A DDLAA KAAAWAWY HGSGSESKPMREFGLTRP+
Sbjct: 1   MPFPSLSLNPFPDRKNPTPTEPTAAHDDLAAVKAAAWAWYQHGSGSESKPMREFGLTRPI 60

Query: 61  SVPKPSRYRLEAIRIAQN--FFQDNSQTPCLH-NSLLDSYEVASISRRISDLLDPTDRNN 120
           +VPKPSRYRLEA   +      QD  QTP  H NSLLDSYE+ASISRR+SDLLDP DRNN
Sbjct: 61  TVPKPSRYRLEATNRSDPTILIQDKLQTPTPHTNSLLDSYEIASISRRLSDLLDPNDRNN 120

Query: 121 FSLRSFESEILDLGREIERKSTKPKKFGGFWRRR----SVMCGKIEDVAIGS 166
           FSLRSFESEI+DLGR+IE K+TKP KF G WR R    S+MCGK+EDV + +
Sbjct: 121 FSLRSFESEIMDLGRQIEGKTTKPNKFSGLWRWRRRKPSLMCGKMEDVVLAT 172

[Close]

BLAST of Cp4.1LG01g19950 vs. NCBI nr
Match: gi|566165569|ref|XP_002305221.2| (hypothetical protein POPTR_0004s08350g, partial [Populus trichocarpa])

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23
Identity = 79/184 (42.93%), Postives = 105/184 (57.07%), Query Frame = 1


Query: 3   LPSFS-FNPFPDRKSPTPTQPTVAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVS 62
           +PS + FN F ++K P     T   DDLA  KAAAWAWYHHGSGSE +P+ EF +TR   
Sbjct: 4   MPSITPFNIFMEKKKPKGGGST---DDLALVKAAAWAWYHHGSGSEGRPICEFDVTRTRQ 63

Query: 63  VPKPSRYRLEAIR-IAQNFFQDNSQTPC---LHNSLLDSYEVASISRRISDL-------- 122
            P+PSRY+LEA R + ++     S+TP      NSLLD YEV SIS+++  L        
Sbjct: 64  APRPSRYKLEATRTMKEDTMGSGSETPSPIRTDNSLLDKYEVESISKQLDYLIESSSNRF 123

Query: 123 ----LDPTDRNNFSLRSFESEILDLGREIERKSTKPKKF-GGFWRRRSVMCGKIEDVAIG 169
               +D  D +  S+ S +S+    G + ++K  K K F  GFW R SV+CG   DV   
Sbjct: 124 YGFKIDHLDHDQRSISSLDSDQTG-GMKQKKKDKKKKTFLQGFWPRHSVVCGTKGDVDTR 183

[Close]

BLAST of Cp4.1LG01g19950 vs. NCBI nr
Match: gi|743916440|ref|XP_011002196.1| (PREDICTED: uncharacterized protein LOC105109260 [Populus euphratica])

HSP 1 Score: 117.1 bits (292), Expect = 3.2e-23
Identity = 79/182 (43.41%), Postives = 103/182 (56.59%), Query Frame = 1


Query: 3   LPSFS-FNPFPDRKSPTPTQPTVAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVS 62
           +PS + FN F ++K P     T   DDLA  KAAAWAWYHHGSGSE +P+ EF +TR   
Sbjct: 1   MPSITPFNIFMEKKKPKGGGST---DDLALAKAAAWAWYHHGSGSEGRPICEFDVTRTRH 60

Query: 63  VPKPSRYRLEAIRI-AQNFFQDNSQTPC---LHNSLLDSYEVASISRRISDLLDPT---- 122
            P+PSRY+LEA RI  ++     S+TP      NSLLD YEV SIS+++  L++ +    
Sbjct: 61  APRPSRYKLEATRIMKEDAMGSGSETPSPIRTDNSLLDKYEVESISKQLDYLIESSSNRF 120

Query: 123 -----DRNNFSLRSFESEILDLGREIERKSTKPKK--FGGFWRRRSVMCGKIEDVAIGSL 169
                D  +   RS  S   D   E+++K  K KK    GF  R SV+CG   DV   +L
Sbjct: 121 YGFKIDHLDHDQRSISSLDSDKTGEMKQKKDKKKKTFLQGFLLRHSVVCGTRGDVDTRAL 179

[Close]

BLAST of Cp4.1LG01g19950 vs. NCBI nr
Match: gi|568857040|ref|XP_006482078.1| (PREDICTED: uncharacterized protein LOC102614743 [Citrus sinensis])

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-20
Identity = 66/183 (36.07%), Postives = 100/183 (54.64%), Query Frame = 1


Query: 1   MPLPSFSFNPFPDRKSPTPTQPTVAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPV 60
           MP+ + SFN F  +K P  +      D+LA  KAAAWAWY  GSGSE KPM +F + R  
Sbjct: 1   MPITTTSFNSFMAKKKPRSS-----TDELAVVKAAAWAWYQRGSGSEGKPMGDFDVARTR 60

Query: 61  SVP-KPSRYRLEAIRIAQN------FFQDNSQTPCLHNSLLDSYEVASISRRISDLLDPT 120
            V  KPSRY+LEA+RI++         +D+      ++SLLD YE+ SIS+R   L++ +
Sbjct: 61  RVVYKPSRYKLEAMRISEQEEAQAAAAEDSISIDNTNHSLLDRYEIESISKRFDQLINSS 120

Query: 121 DRNNFSLRSFESEILDLGREIERKSTKPKKFGGFWRRRSVMCGKIEDVAIGSLVRPPGKQ 177
                   + +S     G  + +K +K +K  GFW R +V+CG  +D  +   +    +Q
Sbjct: 121 TATKLLKNASQSSQRTNGLTMNKKKSKIRK--GFWPRHAVVCGTRQDAVMDPRIYGVSRQ 176

[Close]

BLAST of Cp4.1LG01g19950 vs. NCBI nr
Match: gi|567875925|ref|XP_006430552.1| (hypothetical protein CICLE_v10012847mg [Citrus clementina])

HSP 1 Score: 106.7 bits (265), Expect = 4.3e-20
Identity = 66/183 (36.07%), Postives = 99/183 (54.10%), Query Frame = 1


Query: 1   MPLPSFSFNPFPDRKSPTPTQPTVAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPV 60
           MP+ + SFN F  +K P  +      D+LA  KAAAWAWY  GSGSE KPM +F + R  
Sbjct: 1   MPITTTSFNSFMAKKKPRSS-----TDELAVVKAAAWAWYQRGSGSEGKPMGDFDVARTR 60

Query: 61  SVP-KPSRYRLEAIRIAQN------FFQDNSQTPCLHNSLLDSYEVASISRRISDLLDPT 120
            V  KPSRY+LEA+RI++         +D+      ++SLLD YE+ SIS+R   L++ +
Sbjct: 61  RVVYKPSRYKLEAMRISEQEEAQAAAAEDSISIDNTNHSLLDRYEIESISKRFDQLINSS 120

Query: 121 DRNNFSLRSFESEILDLGREIERKSTKPKKFGGFWRRRSVMCGKIEDVAIGSLVRPPGKQ 177
                   + +S     G  + +K +K  K  GFW R +V+CG  +D  +   +    +Q
Sbjct: 121 TATKLLKNASQSSQRTNGLTMNKKKSKILK--GFWPRHAVVCGTRQDAVMDPRIYGVSRQ 176

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g19950 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g19950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTL9_CUCSA	1.4e-62	72.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G410720 PE=4 SV=1	[more]
B9H3C3_POPTR	7.6e-24	42.93	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s08350g P...	[more]
A0A067ERS6_CITSI	1.0e-20	36.07	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029448mg PE=4 SV=1	[more]
V4SSV2_9ROSI	3.0e-20	36.07	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012847mg PE=4 SV=1	[more]
V7B7W8_PHAVU	7.4e-19	40.00	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G237600g PE=4 SV=1	[more]

BLAST of Cp4.1LG01g19950 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G37550.1	3.2e-13	33.33	unknown protein	[more]
AT1G66190.1	5.2e-08	57.14	unknown protein	[more]

BLAST of Cp4.1LG01g19950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778708494\|ref\|XP_011656214.1\|	2.0e-62	72.67	PREDICTED: uncharacterized protein LOC105435673 [Cucumis sativus]	[more]
gi\|566165569\|ref\|XP_002305221.2\|	1.1e-23	42.93	hypothetical protein POPTR_0004s08350g, partial [Populus trichocarpa]	[more]
gi\|743916440\|ref\|XP_011002196.1\|	3.2e-23	43.41	PREDICTED: uncharacterized protein LOC105109260 [Populus euphratica]	[more]
gi\|568857040\|ref\|XP_006482078.1\|	1.5e-20	36.07	PREDICTED: uncharacterized protein LOC102614743 [Citrus sinensis]	[more]
gi\|567875925\|ref\|XP_006430552.1\|	4.3e-20	36.07	hypothetical protein CICLE_v10012847mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g19950.1	Cp4.1LG01g19950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34665	FAMILY NOT NAMED	coord: 27..161 score: 1.8
None	No IPR available	PANTHER	PTHR34665:SF2	SUBFAMILY NOT NAMED	coord: 27..161 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g19950	Cucsa.034710	Cucumber (Gy14) v1	cgycpeB0018
Cp4.1LG01g19950	CmaCh15G007330	Cucurbita maxima (Rimu)	cmacpeB318
Cp4.1LG01g19950	CmaCh04G023060	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g19950	CmoCh04G024090	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g19950	CmoCh15G007560	Cucurbita moschata (Rifu)	cmocpeB280
Cp4.1LG01g19950	Cla019778	Watermelon (97103) v1	cpewmB399
Cp4.1LG01g19950	Csa5G410720	Cucumber (Chinese Long) v2	cpecuB441
Cp4.1LG01g19950	MELO3C022825	Melon (DHL92) v3.5.1	cpemeB360
Cp4.1LG01g19950	ClCG03G008850	Watermelon (Charleston Gray)	cpewcgB379
Cp4.1LG01g19950	CSPI05G14780	Wild cucumber (PI 183967)	cpecpiB441
Cp4.1LG01g19950	Lsi09G009440	Bottle gourd (USVL1VR-Ls)	cpelsiB311
Cp4.1LG01g19950	MELO3C022825.2	Melon (DHL92) v3.6.1	cpemedB420
Cp4.1LG01g19950	CsaV3_5G023910	Cucumber (Chinese Long) v3	cpecucB0545
Cp4.1LG01g19950	Bhi12G001088	Wax gourd	cpewgoB0490
Cp4.1LG01g19950	CsGy5G014670	Cucumber (Gy14) v2	cgybcpeB650
Cp4.1LG01g19950	Carg01474	Silver-seed gourd	carcpeB1158
Cp4.1LG01g19950	Carg18258	Silver-seed gourd	carcpeB0747

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g19950	Cp4.1LG13g05250	Cucurbita pepo (Zucchini)	cpecpeB199

The following block(s) are covering this gene:

None