MELO3C033736.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C033736.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPrefoldin subunit 5
Locationchr09 : 16482660 .. 16482949 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTCAATCTCCTTCACGACAGCCTTAACAACATTCGCACAGCCACTTCTCGCCTCGACATTGCCTCCGCTGCACTCCACGATCTCTCGCTCCGTCCTCAAGGTTGGTTCCTTTCTCTTTTTTTCATTTCTTCTTCATAATTTAATCTTTTTTTTTTTTATGTGGCTATTTGGTGATTTTTTTTTTTCTGTTTTCTTAGGCAAGAGGATGTTGGTGCCTCTTACTGCGTCGCTTTATGTTCCTGGGACGCTTGATGAGGCCGATAAGGTCTTGGTGGATGTAGGCA

mRNA sequence

ATGGAAGTCAATCTCCTTCACGACAGCCTTAACAACATTCGCACAGCCACTTCTCGCCTCGACATTGCCTCCGCTGCACTCCACGATCTCTCGCTCCGTCCTCAAGGCAAGAGGATGTTGGTGCCTCTTACTGCGTCGCTTTATGTTCCTGGGACGCTTGATGAGGCCGATAAGGTCTTGGTGGATGTAGGCA

Coding sequence (CDS)

ATGGAAGTCAATCTCCTTCACGACAGCCTTAACAACATTCGCACAGCCACTTCTCGCCTCGACATTGCCTCCGCTGCACTCCACGATCTCTCGCTCCGTCCTCAAGGCAAGAGGATGTTGGTGCCTCTTACTGCGTCGCTTTATGTTCCTGGGACGCTTGATGAGGCCGATAAGGTCTTGGTGGATGTAGGC

Protein sequence

MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVG
Homology
[Close]
BLAST of MELO3C033736.2 vs. NCBI nr
Match: XP_004149870.1 (PREDICTED: probable prefoldin subunit 5 [Cucumis sativus] >KGN50940.1 hypothetical protein Csa_5G352600 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 8.2e-26
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1   MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL 60
           MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL
Sbjct: 38  MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL 97

Query: 61  VDVG 65
           VDVG
Sbjct: 98  VDVG 101

[Close]
BLAST of MELO3C033736.2 vs. NCBI nr
Match: XP_008467005.1 (PREDICTED: probable prefoldin subunit 5 [Cucumis melo])

HSP 1 Score: 123.6 bits (309), Expect = 2.4e-25
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0 

Query: 1  MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL 60
          MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRM VPLTASLYVPGTLDEADKVL
Sbjct: 1  MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMFVPLTASLYVPGTLDEADKVL 60

Query: 61 VDVG 65
          VDVG
Sbjct: 61 VDVG 64

[Close]
BLAST of MELO3C033736.2 vs. NCBI nr
Match: XP_008437670.1 (PREDICTED: uncharacterized protein LOC103483010 [Cucumis melo])

HSP 1 Score: 122.9 bits (307), Expect = 4.0e-25
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1   MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL 60
           MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL
Sbjct: 39  MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL 98

Query: 61  VDV 64
           VDV
Sbjct: 99  VDV 101

[Close]
BLAST of MELO3C033736.2 vs. NCBI nr
Match: XP_022938455.1 (probable prefoldin subunit 5 [Cucurbita moschata] >XP_022938456.1 probable prefoldin subunit 5 [Cucurbita moschata])

HSP 1 Score: 121.7 bits (304), Expect = 9.0e-25
Identity = 61/64 (95.31%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL 60
          MEVNLLHDSLNNIRTATSRLDIA+AALHDLSLRPQGK+MLVPLTASLYVPGTLD+ADKVL
Sbjct: 35 MEVNLLHDSLNNIRTATSRLDIATAALHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVL 94

Query: 61 VDVG 65
          VDVG
Sbjct: 95 VDVG 98

[Close]
BLAST of MELO3C033736.2 vs. NCBI nr
Match: XP_023549859.1 (probable prefoldin subunit 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 121.7 bits (304), Expect = 9.0e-25
Identity = 61/64 (95.31%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL 60
          MEVNLLHDSLNNIRTATSRLDIA+AALHDLSLRPQGK+MLVPLTASLYVPGTLD+ADKVL
Sbjct: 35 MEVNLLHDSLNNIRTATSRLDIATAALHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVL 94

Query: 61 VDVG 65
          VDVG
Sbjct: 95 VDVG 98

[Close]
BLAST of MELO3C033736.2 vs. TAIR10
Match: AT5G23290.1 (prefoldin 5)

HSP 1 Score: 111.3 bits (277), Expect = 2.2e-25
Identity = 56/64 (87.50%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 1  MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL 60
          +EVNLL DSLNNIRTAT RLD A+AAL+DLSLRPQGK+MLVPLTASLYVPGTLDEADKVL
Sbjct: 27 LEVNLLQDSLNNIRTATVRLDAAAAALNDLSLRPQGKKMLVPLTASLYVPGTLDEADKVL 86

Query: 61 VDVG 65
          VD+G
Sbjct: 87 VDIG 90

[Close]
BLAST of MELO3C033736.2 vs. Swiss-Prot
Match: sp|P57742|PFD5_ARATH (Probable prefoldin subunit 5 OS=Arabidopsis thaliana OX=3702 GN=At5g23290 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 4.0e-24
Identity = 56/64 (87.50%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 1  MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL 60
          +EVNLL DSLNNIRTAT RLD A+AAL+DLSLRPQGK+MLVPLTASLYVPGTLDEADKVL
Sbjct: 27 LEVNLLQDSLNNIRTATVRLDAAAAALNDLSLRPQGKKMLVPLTASLYVPGTLDEADKVL 86

Query: 61 VDVG 65
          VD+G
Sbjct: 87 VDIG 90

[Close]
BLAST of MELO3C033736.2 vs. Swiss-Prot
Match: sp|Q8HYI9|PFD5_BOVIN (Prefoldin subunit 5 OS=Bos taurus OX=9913 GN=PFDN5 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.1e-05
Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 0 

Query: 2  EVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLV 61
          EV  L  S+  ++   ++   A   L+ L    +GK +LVPLT+S+YVPG L + + VL+
Sbjct: 25 EVEFLSTSIAQLKVVQTKYVEAKDCLNVLKKNNEGKELLVPLTSSMYVPGKLHDVEHVLI 84

Query: 62 DVG 65
          DVG
Sbjct: 85 DVG 87

[Close]
BLAST of MELO3C033736.2 vs. Swiss-Prot
Match: sp|Q99471|PFD5_HUMAN (Prefoldin subunit 5 OS=Homo sapiens OX=9606 GN=PFDN5 PE=1 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 1.1e-05
Identity = 25/63 (39.68%), Postives = 39/63 (61.90%), Query Frame = 0 

Query: 2  EVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLV 61
          EV  L  S+  ++   ++   A   L+ L+   +GK +LVPLT+S+YVPG L + + VL+
Sbjct: 25 EVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTSSMYVPGKLHDVEHVLI 84

Query: 62 DVG 65
          DVG
Sbjct: 85 DVG 87

[Close]
BLAST of MELO3C033736.2 vs. Swiss-Prot
Match: sp|Q9WU28|PFD5_MOUSE (Prefoldin subunit 5 OS=Mus musculus OX=10090 GN=Pfdn5 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.1e-05
Identity = 25/63 (39.68%), Postives = 39/63 (61.90%), Query Frame = 0 

Query: 2  EVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLV 61
          EV  L  S+  ++   ++   A   L+ L+   +GK +LVPLT+S+YVPG L + + VL+
Sbjct: 25 EVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTSSMYVPGKLHDVEHVLI 84

Query: 62 DVG 65
          DVG
Sbjct: 85 DVG 87

[Close]
BLAST of MELO3C033736.2 vs. Swiss-Prot
Match: sp|Q5RAY0|PFD5_PONAB (Prefoldin subunit 5 OS=Pongo abelii OX=9601 GN=PFDN5 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.1e-05
Identity = 25/63 (39.68%), Postives = 39/63 (61.90%), Query Frame = 0 

Query: 2  EVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLV 61
          EV  L  S+  ++   ++   A   L+ L+   +GK +LVPLT+S+YVPG L + + VL+
Sbjct: 25 EVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTSSMYVPGKLHDVEHVLI 84

Query: 62 DVG 65
          DVG
Sbjct: 85 DVG 87

[Close]
BLAST of MELO3C033736.2 vs. TrEMBL
Match: tr|A0A0A0KMS5|A0A0A0KMS5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G352600 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.4e-26
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1   MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL 60
           MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL
Sbjct: 38  MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL 97

Query: 61  VDVG 65
           VDVG
Sbjct: 98  VDVG 101

[Close]
BLAST of MELO3C033736.2 vs. TrEMBL
Match: tr|A0A1S3CSP1|A0A1S3CSP1_CUCME (probable prefoldin subunit 5 OS=Cucumis melo OX=3656 GN=LOC103504416 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-25
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0 

Query: 1  MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL 60
          MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRM VPLTASLYVPGTLDEADKVL
Sbjct: 1  MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMFVPLTASLYVPGTLDEADKVL 60

Query: 61 VDVG 65
          VDVG
Sbjct: 61 VDVG 64

[Close]
BLAST of MELO3C033736.2 vs. TrEMBL
Match: tr|A0A1S3AV61|A0A1S3AV61_CUCME (uncharacterized protein LOC103483010 OS=Cucumis melo OX=3656 GN=LOC103483010 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.7e-25
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1   MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL 60
           MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL
Sbjct: 39  MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL 98

Query: 61  VDV 64
           VDV
Sbjct: 99  VDV 101

[Close]
BLAST of MELO3C033736.2 vs. TrEMBL
Match: tr|B9S4J8|B9S4J8_RICCO (Prefoldin subunit, putative OS=Ricinus communis OX=3988 GN=RCOM_0809120 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.6e-23
Identity = 57/64 (89.06%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 1  MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL 60
          +EVNLL DSLNNIRTAT+RL+IAS ALHDLSLRPQGK+MLVPLTASLYVPGTLDEADKVL
Sbjct: 32 LEVNLLQDSLNNIRTATTRLEIASTALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVL 91

Query: 61 VDVG 65
          VD+G
Sbjct: 92 VDIG 95

[Close]
BLAST of MELO3C033736.2 vs. TrEMBL
Match: tr|A0A218VSX5|A0A218VSX5_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr008037 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-22
Identity = 56/64 (87.50%), Postives = 63/64 (98.44%), Query Frame = 0 

Query: 1  MEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVL 60
          +EVNLL DSLNNIRTATSRL+IAS+ALHDLSLRPQG++MLVPLTASLYVPGTLD+AD+VL
Sbjct: 32 LEVNLLQDSLNNIRTATSRLEIASSALHDLSLRPQGQKMLVPLTASLYVPGTLDDADRVL 91

Query: 61 VDVG 65
          VDVG
Sbjct: 92 VDVG 95

The following BLAST results are available for this feature:
BLAST of MELO3C033736.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149870.18.2e-26100.00PREDICTED: probable prefoldin subunit 5 [Cucumis sativus] >KGN50940.1 hypothetic... [more]
XP_008467005.12.4e-2598.44PREDICTED: probable prefoldin subunit 5 [Cucumis melo][more]
XP_008437670.14.0e-25100.00PREDICTED: uncharacterized protein LOC103483010 [Cucumis melo][more]
XP_022938455.19.0e-2595.31probable prefoldin subunit 5 [Cucurbita moschata] >XP_022938456.1 probable prefo... [more]
XP_023549859.19.0e-2595.31probable prefoldin subunit 5 [Cucurbita pepo subsp. pepo][more]
BLAST of MELO3C033736.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G23290.12.2e-2587.50prefoldin 5[more]
BLAST of MELO3C033736.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P57742|PFD5_ARATH4.0e-2487.50Probable prefoldin subunit 5 OS=Arabidopsis thaliana OX=3702 GN=At5g23290 PE=2 S... [more]
sp|Q8HYI9|PFD5_BOVIN1.1e-0539.68Prefoldin subunit 5 OS=Bos taurus OX=9913 GN=PFDN5 PE=2 SV=1[more]
sp|Q99471|PFD5_HUMAN1.1e-0539.68Prefoldin subunit 5 OS=Homo sapiens OX=9606 GN=PFDN5 PE=1 SV=2[more]
sp|Q9WU28|PFD5_MOUSE1.1e-0539.68Prefoldin subunit 5 OS=Mus musculus OX=10090 GN=Pfdn5 PE=1 SV=1[more]
sp|Q5RAY0|PFD5_PONAB1.1e-0539.68Prefoldin subunit 5 OS=Pongo abelii OX=9601 GN=PFDN5 PE=2 SV=1[more]
BLAST of MELO3C033736.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KMS5|A0A0A0KMS5_CUCSA5.4e-26100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G352600 PE=4 SV=1[more]
tr|A0A1S3CSP1|A0A1S3CSP1_CUCME1.6e-2598.44probable prefoldin subunit 5 OS=Cucumis melo OX=3656 GN=LOC103504416 PE=4 SV=1[more]
tr|A0A1S3AV61|A0A1S3AV61_CUCME2.7e-25100.00uncharacterized protein LOC103483010 OS=Cucumis melo OX=3656 GN=LOC103483010 PE=... [more]
tr|B9S4J8|B9S4J8_RICCO5.6e-2389.06Prefoldin subunit, putative OS=Ricinus communis OX=3988 GN=RCOM_0809120 PE=4 SV=... [more]
tr|A0A218VSX5|A0A218VSX5_PUNGR2.1e-2287.50Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr008037 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016272prefoldin complex
Vocabulary: INTERPRO
TermDefinition
IPR009053Prefoldin
IPR004127Prefoldin_subunit_alpha
IPR011599PFD_alpha_archaea
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0016272 prefoldin complex
cellular_component GO:0005829 cytosol
molecular_function GO:0051082 unfolded protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033736.2.1MELO3C033736.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011599Prefoldin alpha subunit, archaea-typeTIGRFAMTIGR00293TIGR00293coord: 2..64
e-value: 2.4E-17
score: 61.2
IPR004127Prefoldin alpha-likePFAMPF02996Prefoldincoord: 2..64
e-value: 2.9E-12
score: 46.4
IPR009053PrefoldinGENE3DG3DSA:1.10.287.370coord: 1..64
e-value: 6.7E-14
score: 53.7
NoneNo IPR availablePANTHERPTHR12674PREFOLDIN SUBUNIT 5coord: 2..64
NoneNo IPR availablePANTHERPTHR12674:SF2PREFOLDIN SUBUNIT 5coord: 2..64
NoneNo IPR availableSUPERFAMILYSSF46579Prefoldincoord: 2..64

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C033736.2Csa5G352600Cucumber (Chinese Long) v2cumedB332
MELO3C033736.2CSPI05G13840Wild cucumber (PI 183967)cpimedB335
MELO3C033736.2Cucsa.013970Cucumber (Gy14) v1cgymedB367
MELO3C033736.2CmaCh15G007900Cucurbita maxima (Rimu)cmamedB286
MELO3C033736.2CmaCh04G022440Cucurbita maxima (Rimu)cmamedB721
MELO3C033736.2CmoCh04G023450Cucurbita moschata (Rifu)cmomedB714
MELO3C033736.2Lsi09G008610Bottle gourd (USVL1VR-Ls)lsimedB014
MELO3C033736.2Cp4.1LG01g19500Cucurbita pepo (Zucchini)cpemedB419
MELO3C033736.2Cp4.1LG13g05590Cucurbita pepo (Zucchini)cpemedB184
MELO3C033736.2CsGy5G013690Cucumber (Gy14) v2cgybmedB295
MELO3C033736.2Cla009085Watermelon (97103) v1medwmB031
MELO3C033736.2ClCG01G008100Watermelon (Charleston Gray)medwcgB018
MELO3C033736.2Cla97C01G008450Watermelon (97103) v2medwmbB008
MELO3C033736.2Carg17776Silver-seed gourdcarmedB0487
MELO3C033736.2Carg01415Silver-seed gourdcarmedB0832
MELO3C033736.2CsaV3_5G020730Cucumber (Chinese Long) v3cucmedB344
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C033736.2Cucurbita maxima (Rimu)cmamedB719
MELO3C033736.2Cucurbita moschata (Rifu)cmomedB272
MELO3C033736.2Cucurbita moschata (Rifu)cmomedB711
MELO3C033736.2Cucurbita pepo (Zucchini)cpemedB416
MELO3C033736.2Melon (DHL92) v3.6.1medmedB005
MELO3C033736.2Bottle gourd (USVL1VR-Ls)lsimedB295
MELO3C033736.2Watermelon (Charleston Gray)medwcgB020
MELO3C033736.2Watermelon (97103) v1medwmB036
MELO3C033736.2Watermelon (97103) v2medwmbB017
MELO3C033736.2Wax gourdmedwgoB015