Carg01415 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01415
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Prefoldin subunit 5, putative, expressed
Location	Cucurbita_argyrosperma_scaffold_004 : 800814 .. 802140 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGAGAAAAGGAGGTAGCGCCGGCGAAGGGGTGAGATCGTTGGAGTTGGAGAAGATGAGTGTCGAGCAGCTAAAAGCTTTCAAGGAACAGATTGATATGGAAGTCAATCTCCTTCACGATAGCCTCAACAACATTCGCACAGCCACTTCTCGCCTCGACATTGCTACCGCTGCTCTTCACGACCTCTCGCTCCGCCCTCAAGGTTCTTTTCTCTGTTTTTACTGCTAGAAGTTGGTGTAAGGAAGTTTGTTGGTTCGGATTGTAATCTGCAATTCCTCCTTCGTTTTTATATGGTTTTGTTTCGTCGTTGATTTATTTGTTGTGATTCTTCGATGAGGCTGGGAAATAGTCTGTTGTGTTCGCTCGATTGTGCTGATTGTTGATTAGTTTTTTTTTTTTTTTTTTTTTTTTCTCCTTTTTCTTCTTAATGCTTAGGCAAGAAGATGTTGGTGCCTCTTACTGCGTCGCTTTATGTTCCTGGAACGCTCGATGATGCCGACAAGGTCTTGGTGGATGTAGGCACTGGATACTTCATTGAGGTCGGTTTGGTGGACTTTTGAACCTGATTGTTTGGTTGCTATTGTTCAATTCTTGGTTGATTTTGTTCTTGCATCACGTGTTATTTGTTTTTCACAAAAAAAAAAAAAAAAAAAAAAAAGGTTGAAATTCTATTCAGTGTTCATTTGATTTCATTCAGCAACGAGACTGGTGTAGCTGAAAATTGATCTTCGTTTTCCGACACATGGCTGATGTCCTTGTATTACAAAATGTCATGAATTACTTGTTATTCACAATGTAGTGTGGTGCCTTCTGTTGAGTGATGCATGCTGGTTTACTTTCGCTTTCCGTTGCCAATATGGCAATACTTAAATTCTTAGTATTTTCACATGAATTTTCAGAACATTATTAGAAAGTAGGTAACAAAATAAAGAAATTCATAGGTGGAAGTAGTGTTTATAAACTTAATTTTCAAAAACCGATATCAAATGATTATTAAATGGGCCCCTTATCTGATTTACCTTCTAAATATGGTGCTTTATCTATATCAATCTTCAAACCTATCTGAATTTGTTCTTGTTTATAGACATAAATTGATGCTGATTGTTATCATCAGTTAGGATCTTATGATTCACTGAGTAAGAATTATGATCCAGCTTTGTCAACAATAATATCAGTTTATTATGTATTGGTGTTGGAAATGTGTTTTCATGACTTGATTGTGTTGATTTGATGGTTGAATCAGAAAACAATGGCTGAAGGAAAAGATTACTGTGATCGAAAGATCAAATTGCTGAGGTCGAATTTTGACCAACTAATCGAG

mRNA sequence

ATGGCGTCGAGAAAAGGAGGTAGCGCCGGCGAAGGGGTGAGATCGTTGGAGTTGGAGAAGATGAGTGTCGAGCAGCTAAAAGCTTTCAAGGAACAGATTGATATGGAAGTCAATCTCCTTCACGATAGCCTCAACAACATTCGCACAGCCACTTCTCGCCTCGACATTGCTACCGCTGCTCTTCACGACCTCTCGCTCCGCCCTCAAGGCAAGAAGATGTTGGTGCCTCTTACTGCGTCGCTTTATGTTCCTGGAACGCTCGATGATGCCGACAAGGTCTTGGTGGATGTAGGCACTGGATACTTCATTGAGAAAACAATGGCTGAAGGAAAAGATTACTGTGATCGAAAGATCAAATTGCTGAGGTCGAATTTTGACCAACTAATCGAG

Coding sequence (CDS)

ATGGCGTCGAGAAAAGGAGGTAGCGCCGGCGAAGGGGTGAGATCGTTGGAGTTGGAGAAGATGAGTGTCGAGCAGCTAAAAGCTTTCAAGGAACAGATTGATATGGAAGTCAATCTCCTTCACGATAGCCTCAACAACATTCGCACAGCCACTTCTCGCCTCGACATTGCTACCGCTGCTCTTCACGACCTCTCGCTCCGCCCTCAAGGCAAGAAGATGTTGGTGCCTCTTACTGCGTCGCTTTATGTTCCTGGAACGCTCGATGATGCCGACAAGGTCTTGGTGGATGTAGGCACTGGATACTTCATTGAGAAAACAATGGCTGAAGGAAAAGATTACTGTGATCGAAAGATCAAATTGCTGAGGTCGAATTTTGACCAACTAATCGAG

Protein sequence

MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAALHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIE

Homology

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BLAST of Carg01415 vs. NCBI nr
Match: XP_022938455.1 (probable prefoldin subunit 5 [Cucurbita moschata] >XP_022938456.1 probable prefoldin subunit 5 [Cucurbita moschata])

HSP 1 Score: 252.3 bits (643), Expect = 9.0e-64
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAA 60
           MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAA
Sbjct: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120

Query: 121 LRSNFDQLIE 131
           LRSNFDQLIE
Sbjct: 121 LRSNFDQLIE 130

[Close]

BLAST of Carg01415 vs. NCBI nr
Match: XP_023549859.1 (probable prefoldin subunit 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.4 bits (638), Expect = 3.4e-63
Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAA 60
           MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQ DMEVNLLHDSLNNIRTATSRLDIATAA
Sbjct: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATAA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120

Query: 121 LRSNFDQLIE 131
           LRSNFDQLIE
Sbjct: 121 LRSNFDQLIE 130

[Close]

BLAST of Carg01415 vs. NCBI nr
Match: XP_022993145.1 (probable prefoldin subunit 5 [Cucurbita maxima] >XP_022993146.1 probable prefoldin subunit 5 [Cucurbita maxima])

HSP 1 Score: 243.8 bits (621), Expect = 3.2e-61
Identity = 126/130 (96.92%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAA 60
           MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQ DMEVNLLHDSLNNIRTATSRLDIATA 
Sbjct: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATAV 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKV VDVGTGYFIEKTMAEGKDYCD KIKL
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKIKL 120

Query: 121 LRSNFDQLIE 131
           LRSNFDQLIE
Sbjct: 121 LRSNFDQLIE 130

[Close]

BLAST of Carg01415 vs. NCBI nr
Match: XP_022958568.1 (probable prefoldin subunit 5 [Cucurbita moschata] >XP_022990035.1 probable prefoldin subunit 5 [Cucurbita maxima])

HSP 1 Score: 242.7 bits (618), Expect = 7.1e-61
Identity = 125/130 (96.15%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAA 60
           MASRKGGSAGEGVRSLELEKMSVEQLKA KEQ DMEVNLLHDSLNNIRTATSRLD A+AA
Sbjct: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120

Query: 121 LRSNFDQLIE 131
           L+SNFDQLIE
Sbjct: 121 LKSNFDQLIE 130

[Close]

BLAST of Carg01415 vs. NCBI nr
Match: XP_023513364.1 (probable prefoldin subunit 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.1 bits (614), Expect = 2.1e-60
Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAA 60
           MASRKGGS GEGVRSLELEKMSVEQLKA KEQ DMEVNLLHDSLNNIRTATSRLD A+AA
Sbjct: 1   MASRKGGSGGEGVRSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120

Query: 121 LRSNFDQLIE 131
           L+SNFDQLIE
Sbjct: 121 LKSNFDQLIE 130

[Close]

BLAST of Carg01415 vs. TAIR10
Match: AT5G23290.1 (prefoldin 5)

HSP 1 Score: 190.7 bits (483), Expect = 5.8e-49
Identity = 94/114 (82.46%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 17  ELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAALHDLSLRPQGKKMLVP 76
           E+EKM ++QLKA KEQ D+EVNLL DSLNNIRTAT RLD A AAL+DLSLRPQGKKMLVP
Sbjct: 9   EMEKMGIDQLKALKEQADLEVNLLQDSLNNIRTATVRLDAAAAALNDLSLRPQGKKMLVP 68

Query: 77  LTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIE 131
           LTASLYVPGTLD+ADKVLVD+GTGYFIEKTM +GKDYC RKI LL+SNFDQL E
Sbjct: 69  LTASLYVPGTLDEADKVLVDIGTGYFIEKTMDDGKDYCQRKINLLKSNFDQLFE 122

[Close]

BLAST of Carg01415 vs. Swiss-Prot
Match: sp|P57742|PFD5_ARATH (Probable prefoldin subunit 5 OS=Arabidopsis thaliana OX=3702 GN=At5g23290 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.1e-47
Identity = 94/114 (82.46%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 17  ELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAALHDLSLRPQGKKMLVP 76
           E+EKM ++QLKA KEQ D+EVNLL DSLNNIRTAT RLD A AAL+DLSLRPQGKKMLVP
Sbjct: 9   EMEKMGIDQLKALKEQADLEVNLLQDSLNNIRTATVRLDAAAAALNDLSLRPQGKKMLVP 68

Query: 77  LTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIE 131
           LTASLYVPGTLD+ADKVLVD+GTGYFIEKTM +GKDYC RKI LL+SNFDQL E
Sbjct: 69  LTASLYVPGTLDEADKVLVDIGTGYFIEKTMDDGKDYCQRKINLLKSNFDQLFE 122

[Close]

BLAST of Carg01415 vs. Swiss-Prot
Match: sp|Q99471|PFD5_HUMAN (Prefoldin subunit 5 OS=Homo sapiens OX=9606 GN=PFDN5 PE=1 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-18
Identity = 44/115 (38.26%), Postives = 74/115 (64.35%), Query Frame = 0


Query: 14  RSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAALHDLSLRPQGKKM 73
           +S+ + ++++ QL+  K Q+D EV  L  S+  ++   ++   A   L+ L+   +GK++
Sbjct: 3   QSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKEL 62

Query: 74  LVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKLLRSNFDQL 129
           LVPLT+S+YVPG L D + VL+DVGTGY++EKT  + KD+  RKI  L    +++
Sbjct: 63  LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 117

[Close]

BLAST of Carg01415 vs. Swiss-Prot
Match: sp|Q9WU28|PFD5_MOUSE (Prefoldin subunit 5 OS=Mus musculus OX=10090 GN=Pfdn5 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-18
Identity = 44/115 (38.26%), Postives = 74/115 (64.35%), Query Frame = 0


Query: 14  RSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAALHDLSLRPQGKKM 73
           +S+ + ++++ QL+  K Q+D EV  L  S+  ++   ++   A   L+ L+   +GK++
Sbjct: 3   QSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKEL 62

Query: 74  LVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKLLRSNFDQL 129
           LVPLT+S+YVPG L D + VL+DVGTGY++EKT  + KD+  RKI  L    +++
Sbjct: 63  LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 117

[Close]

BLAST of Carg01415 vs. Swiss-Prot
Match: sp|Q5RAY0|PFD5_PONAB (Prefoldin subunit 5 OS=Pongo abelii OX=9601 GN=PFDN5 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-18
Identity = 44/115 (38.26%), Postives = 74/115 (64.35%), Query Frame = 0


Query: 14  RSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAALHDLSLRPQGKKM 73
           +S+ + ++++ QL+  K Q+D EV  L  S+  ++   ++   A   L+ L+   +GK++
Sbjct: 3   QSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKEL 62

Query: 74  LVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKLLRSNFDQL 129
           LVPLT+S+YVPG L D + VL+DVGTGY++EKT  + KD+  RKI  L    +++
Sbjct: 63  LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 117

[Close]

BLAST of Carg01415 vs. Swiss-Prot
Match: sp|Q8HYI9|PFD5_BOVIN (Prefoldin subunit 5 OS=Bos taurus OX=9913 GN=PFDN5 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-18
Identity = 44/115 (38.26%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 14  RSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAALHDLSLRPQGKKM 73
           +S+ + ++++ QL+  K Q+D EV  L  S+  ++   ++   A   L+ L    +GK++
Sbjct: 3   QSVNITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLKKNNEGKEL 62

Query: 74  LVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKLLRSNFDQL 129
           LVPLT+S+YVPG L D + VL+DVGTGY++EKT  + KD+  RKI  L    +++
Sbjct: 63  LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 117

[Close]

BLAST of Carg01415 vs. TrEMBL
Match: tr|A0A0A0KMS5|A0A0A0KMS5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G352600 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.1e-57
Identity = 122/133 (91.73%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1   MASRKGGSA-GEGVRS--LELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIA 60
           MASRKGGS+ GEGVRS  LELEKMSVEQL+AFKEQ DMEVNLLHDSLNNIRTATSRLDIA
Sbjct: 1   MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIA 60

Query: 61  TAALHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRK 120
           +AALHDLSLRPQGK+MLVPLTASLYVPGTLD+ADKVLVDVGTGYFIEKTMA+GKDYC+RK
Sbjct: 61  SAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERK 120

Query: 121 IKLLRSNFDQLIE 131
           IKLLRSNFDQLIE
Sbjct: 121 IKLLRSNFDQLIE 133

[Close]

BLAST of Carg01415 vs. TrEMBL
Match: tr|A0A1R3GWP4|A0A1R3GWP4_9ROSI (Prefoldin subunit OS=Corchorus olitorius OX=93759 GN=COLO4_33086 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 7.5e-51
Identity = 105/130 (80.77%), Postives = 116/130 (89.23%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAA 60
           M+S +GG     +R+ ELEKMS+EQLKA KEQ D+EVNLL DSLNNIRTAT RL+IA+ A
Sbjct: 1   MSSSRGGGVQPLMRAAELEKMSLEQLKAVKEQADIEVNLLQDSLNNIRTATGRLEIASTA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDAD VLVD+GTGYF+EKTMAEGKDYCDRKI L
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADNVLVDIGTGYFVEKTMAEGKDYCDRKINL 120

Query: 121 LRSNFDQLIE 131
           L+SNFDQLIE
Sbjct: 121 LKSNFDQLIE 130

[Close]

BLAST of Carg01415 vs. TrEMBL
Match: tr|A0A1U8IVZ4|A0A1U8IVZ4_GOSHI (probable prefoldin subunit 5 OS=Gossypium hirsutum OX=3635 GN=LOC107900968 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 7.5e-51
Identity = 104/130 (80.00%), Postives = 119/130 (91.54%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAA 60
           MAS +GG + + +RS ++EKMS++QLKA KEQ D+EVNLL DSLNNIRTAT RL+ A+AA
Sbjct: 1   MASSRGGGSQQVIRSGDMEKMSLDQLKAVKEQADIEVNLLQDSLNNIRTATGRLENASAA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVD+GTGYF+EKTMAEGKDYC+RKI L
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDIGTGYFVEKTMAEGKDYCERKINL 120

Query: 121 LRSNFDQLIE 131
           L+SNFDQLIE
Sbjct: 121 LKSNFDQLIE 130

[Close]

BLAST of Carg01415 vs. TrEMBL
Match: tr|A0A2P5W4L7|A0A2P5W4L7_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA34706 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 7.5e-51
Identity = 104/130 (80.00%), Postives = 119/130 (91.54%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAA 60
           MAS +GG + + +RS ++EKMS++QLKA KEQ D+EVNLL DSLNNIRTAT RL+ A+AA
Sbjct: 1   MASSRGGGSQQVIRSGDMEKMSLDQLKAVKEQADIEVNLLQDSLNNIRTATGRLENASAA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVD+GTGYF+EKTMAEGKDYC+RKI L
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDIGTGYFVEKTMAEGKDYCERKINL 120

Query: 121 LRSNFDQLIE 131
           L+SNFDQLIE
Sbjct: 121 LKSNFDQLIE 130

[Close]

BLAST of Carg01415 vs. TrEMBL
Match: tr|A0A067L0B0|A0A067L0B0_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05973 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.2e-50
Identity = 105/132 (79.55%), Postives = 117/132 (88.64%), Query Frame = 0


Query: 1   MASRKGGSAGEG--VRSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIAT 60
           MAS KGG       +R  E+E+MS+EQLKAFKEQ D+EVNLL DSLNNIRTAT RL+ A+
Sbjct: 1   MASSKGGXXXSSPMIRVAEMERMSIEQLKAFKEQTDLEVNLLQDSLNNIRTATGRLENAS 60

Query: 61  AALHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKI 120
           +ALHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVD+GTGYF+EKTMAEGKDYC+RKI
Sbjct: 61  SALHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDIGTGYFVEKTMAEGKDYCERKI 120

Query: 121 KLLRSNFDQLIE 131
            LL+SNFDQLIE
Sbjct: 121 NLLKSNFDQLIE 132

The following BLAST results are available for this feature:

BLAST of Carg01415 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938455.1	9.0e-64	100.00	probable prefoldin subunit 5 [Cucurbita moschata] >XP_022938456.1 probable prefo...	[more]
XP_023549859.1	3.4e-63	99.23	probable prefoldin subunit 5 [Cucurbita pepo subsp. pepo]	[more]
XP_022993145.1	3.2e-61	96.92	probable prefoldin subunit 5 [Cucurbita maxima] >XP_022993146.1 probable prefold...	[more]
XP_022958568.1	7.1e-61	96.15	probable prefoldin subunit 5 [Cucurbita moschata] >XP_022990035.1 probable prefo...	[more]
XP_023513364.1	2.1e-60	95.38	probable prefoldin subunit 5 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg01415 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23290.1	5.8e-49	82.46	prefoldin 5	[more]

BLAST of Carg01415 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P57742\|PFD5_ARATH	1.1e-47	82.46	Probable prefoldin subunit 5 OS=Arabidopsis thaliana OX=3702 GN=At5g23290 PE=2 S...	[more]
sp\|Q99471\|PFD5_HUMAN	1.3e-18	38.26	Prefoldin subunit 5 OS=Homo sapiens OX=9606 GN=PFDN5 PE=1 SV=2	[more]
sp\|Q9WU28\|PFD5_MOUSE	1.3e-18	38.26	Prefoldin subunit 5 OS=Mus musculus OX=10090 GN=Pfdn5 PE=1 SV=1	[more]
sp\|Q5RAY0\|PFD5_PONAB	1.3e-18	38.26	Prefoldin subunit 5 OS=Pongo abelii OX=9601 GN=PFDN5 PE=2 SV=1	[more]
sp\|Q8HYI9\|PFD5_BOVIN	1.7e-18	38.26	Prefoldin subunit 5 OS=Bos taurus OX=9913 GN=PFDN5 PE=2 SV=1	[more]

BLAST of Carg01415 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KMS5\|A0A0A0KMS5_CUCSA	1.1e-57	91.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G352600 PE=4 SV=1	[more]
tr\|A0A1R3GWP4\|A0A1R3GWP4_9ROSI	7.5e-51	80.77	Prefoldin subunit OS=Corchorus olitorius OX=93759 GN=COLO4_33086 PE=4 SV=1	[more]
tr\|A0A1U8IVZ4\|A0A1U8IVZ4_GOSHI	7.5e-51	80.00	probable prefoldin subunit 5 OS=Gossypium hirsutum OX=3635 GN=LOC107900968 PE=4 ...	[more]
tr\|A0A2P5W4L7\|A0A2P5W4L7_GOSBA	7.5e-51	80.00	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA34706 PE=4 SV...	[more]
tr\|A0A067L0B0\|A0A067L0B0_JATCU	2.2e-50	79.55	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05973 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0051082	unfolded protein binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016272	prefoldin complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

Vocabulary: **INTERPRO**
Term	Definition
IPR009053	Prefoldin
IPR011599	PFD_alpha_archaea
IPR004127	Prefoldin_subunit_alpha

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0051082	unfolded protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01415-RA	Carg01415-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004127	Prefoldin alpha-like	PFAM	PF02996	Prefoldin	coord: 36..128 e-value: 1.9E-25 score: 89.0
IPR011599	Prefoldin alpha subunit, archaea-type	TIGRFAM	TIGR00293	TIGR00293	coord: 23..128 e-value: 1.2E-32 score: 110.8
IPR009053	Prefoldin	GENE3D	G3DSA:1.10.287.370		coord: 16..130 e-value: 1.7E-31 score: 110.8
None	No IPR available	PANTHER	PTHR12674	PREFOLDIN SUBUNIT 5	coord: 15..128
None	No IPR available	PANTHER	PTHR12674:SF2	PREFOLDIN SUBUNIT 5	coord: 15..128
None	No IPR available	CDD	cd00584	Prefoldin_alpha	coord: 23..128 e-value: 2.34206E-28 score: 101.152
None	No IPR available	SUPERFAMILY	SSF46579	Prefoldin	coord: 22..128

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01415	Cla009085	Watermelon (97103) v1	carwmB0831
Carg01415	Csa5G352600	Cucumber (Chinese Long) v2	carcuB0847
Carg01415	MELO3C005064	Melon (DHL92) v3.5.1	carmeB0821
Carg01415	ClCG01G008100	Watermelon (Charleston Gray)	carwcgB0800
Carg01415	CSPI05G13840	Wild cucumber (PI 183967)	carcpiB0866
Carg01415	Cucsa.013970	Cucumber (Gy14) v1	carcgyB0950
Carg01415	CmaCh04G022440	Cucurbita maxima (Rimu)	carcmaB1150
Carg01415	CmaCh15G007900	Cucurbita maxima (Rimu)	carcmaB1148
Carg01415	CmoCh04G023450	Cucurbita moschata (Rifu)	carcmoB1121
Carg01415	Lsi09G008610	Bottle gourd (USVL1VR-Ls)	carlsiB754
Carg01415	Cp4.1LG13g05590	Cucurbita pepo (Zucchini)	carcpeB1157
Carg01415	Cp4.1LG01g19500	Cucurbita pepo (Zucchini)	carcpeB1158
Carg01415	CsGy5G013690	Cucumber (Gy14) v2	carcgybB0820
Carg01415	MELO3C033736.2	Melon (DHL92) v3.6.1	carmedB0832
Carg01415	CsaV3_5G020730	Cucumber (Chinese Long) v3	carcucB0870
Carg01415	Cla97C01G008450	Watermelon (97103) v2	carwmbB0858

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01415	Carg17776	Silver-seed gourd	carcarB469

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01415	Cucurbita moschata (Rifu)	carcmoB1118
Carg01415	Watermelon (97103) v2	carwmbB0859
Carg01415	Wax gourd	carwgoB0962