CmaCh15G007900 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G007900
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Prefoldin subunit, putative
Location	Cma_Chr15 : 3945055 .. 3947933 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTAGTAATGAGCTAAAATATATTTGAGAGAGTTAATTGAATCCGAACTCGAGGAGAAGCAATGGCGTCGAGAAAAGGAGGTAGCGCCGGCGAAGGGGTGAGATCGTTGGAGTTGGAGAAGATGAGTGTCGAGCAGCTAAAAGCCTTCAAGGAACAGACTGATATGGAAGTCAATCTCCTTCACGATAGCCTCAACAACATTCGCACAGCCACTTCTCGCCTCGACATTGCCACCGCTGTGCTTCACGACCTCTCGCTCCGCCCTCAAGGTTCTTTCCTCTGTTTTTACTGCTAGAAGTTGGTGTAAATAAACTTGTTGGTTCGGATTGTAATCTGCGATTCCTCCTTCGTTTTTATATGGTTTTGTTTCATCGTTGATTATTTGTTGTGATTCTTCGATGAGGCAGGGAAATAGTCTGTTGTGTTTGCTCGATTGTGCTGATTGTTGATTAGTTTTTTTTTTTCTTTTTCTTTTTCTTCTTAATGCTTAGGCAAGAAGATGTTGGTGCCTCTTACTGCTTCGCTTTATGTTCCTGGAACGCTCGATGATGCCGATAAGGTCTCGGTGGATGTAGGCACTGGATACTTCATTGAGGTCGGTTTGGTGGACTTTTGAACCTGATTGTTTGGTTGCCATTGTTCAATTCTTGGTTGATTTTGTTCTTGCATCACTTGTTATTTGTTTTTCACGAAAAAAAAAAAAAAAAAGAAGGTTGAAATTATATTCAGTGTTTATTTGATTTCATTCAGCAACGAGACTGGTGTAGCTGAAAATTTATCTTCGTTTTCCAACACATGGCTGATGTCCTTGTATTACAAAATGTCATGAATTACTTATTATTCACAATGTAGTGTAGTGCCTTCTGTTGAGTGATGCATGCTGGTTTTCTTTCGCTTTCCGTTGCCAAGGCTCCGTCTGGATAACCCTTTGTCCTTTATTTTTCCTTTAAAAAATGAAATTGTATTTGTTTTCTCACCATTTATTTACAATATGGCAGTACTTAAATTCTTAGTATTTTGACATGAATTTTCAGAACATTTTTAGAAAGTAGGTAACAAAATAAAGAACTTCATAGGTGGAAGTAGTGTTTATAAGCTTAATTTTCAAAAACTGATATCGAATGATTATTAAATGGGCCCAAATGACTTATCTGATTTAGTACTTTATCTATATCAATCTTCAAACCTATCTGAATTTGTTCTTGTTTATAAACATAAATTGATGCTGATTGTTATCATCAGTTAGGATCTTATGATTCACTGAGTAAGAATTATGATCCAGCTTTGTCAACAATAATATCAGTTTATTATGTATTGGTGTTGGAAATGTGTTTTCATGACTTGATTGTGTTGATTTGATGATTGAATCAGAAAACAATGGCAGAAGGAAAAGATTACTGTGATCCAAAGATCAAATTGCTGAGGTCGAATTTTGACCAACTAATCGAGGTATTATGACTATTTTGAAGTTGAATTTGGAACAAAAAGTTTTCTAGTGAAAGAAGTGTCAATGTATGAACCATGTATTGTAGTTTCTTAATGTTAATTCTGCATCTTTTCTTGTGAATAAAGTACAGCACAAAAAAGTTCGTAGAATTTAACAAGTTTTAAAAACTAAAAAAGAAAGTTTTTTTTTTTTTTTTTAAATGTTTTAAAACCGTGAATTTTATTATTTTTTTAAAAAATAATTGAACAGGTTTAATATTTTTGAAAACAGGAAGGTAAAGAGGAAATTGTTGTGTGAAAACAGGACGTTTAATATTTTCCCAGCAGCCCATGATATATCCTTAAAGACTCTTGAAAACATCCTCTCATTAGTCATTTCTTTAGTTCTCATGATATAGTTATCCACAATGCTATAACTTCTATAAGATATTTGAATTTGTTTATTGTGCACCTTGAGCAAAAAACCCATGCTTGAGTCTTGAACAGCAGTTGTTCATTAGTATTCCTCATACTTCACTGTGACCTCTCCTATAAAATACCCAATAATGGAGAGATCTTTTTTATTTAGTTTACTCGGGAGTCTTTGTTATAGAGGAAAATGAGGAACTAATATACTGTGTACTGTGTGAACAAAGGCCTCCTACTTCCCCTCTACTGTGAACAAAGGTTTCCTGCTTCCCGTGTATTGTGTGAACAGAGGCCTACTAGACATTGAGGCAGGGTACTCATAAATTGTAAAGTAGGAGCTATTGTTAGTGGTCACTACCCGTAAGTCGAGGCTGTACTTCTAGGCCCATTTGATATGTACCACCTTTACTTCATAAAATATTTAGCACAAGTTTGATCAACTCATCAAGATGAGTAGTTAATCTAAGTGAGTCCAACATCTCCAGCTGAGTGACGAATAGAGACCAAGGCCCAAGCTTTGATTGATTTTGTCATGGAGATATCCAAAACATAGCTGAAATTGCTCAAACCAAGTTAGCTAAATAGTGGCCACTGGCCCCCTCCTGCAACAACAAATCTTGTGGAGTTGGACTAATGCTCAAGACCCTTGGTGACTCGGTCCTTGAGCAGTCTATATAGCTCGAATTTTGATGCTTCGATAATGGGATGGAATATGGAACTCATGCCCTCATCATAACATATAATCTTGCTTAGGAACTAAAAGAGAAATGATCCTAAACTAAACCCTGTCCTTGTCCCTCGGAAGAGCTGACCTTAGGCCTAAAGTTTTTTTTGTGGACTAGAGGGGTTGGCTACCTTTGGGTTCGAACCAAGCAGGGTCTAGCCTCGGTTTCAGGGAAAAACAGAGTAAATATACATTTAATTTAATATTTATTTCCGTGGCAAAAGTTTATTTTGATTATTTTACCATTTCAACATGGGATTGCTACTAAAAAGAAAAAAGTAGCAGATGAAGCTGGGGTGA

mRNA sequence

TAGTAGTAATGAGCTAAAATATATTTGAGAGAGTTAATTGAATCCGAACTCGAGGAGAAGCAATGGCGTCGAGAAAAGGAGGTAGCGCCGGCGAAGGGGTGAGATCGTTGGAGTTGGAGAAGATGAGTGTCGAGCAGCTAAAAGCCTTCAAGGAACAGACTGATATGGAAGTCAATCTCCTTCACGATAGCCTCAACAACATTCGCACAGCCACTTCTCGCCTCGACATTGCCACCGCTGTGCTTCACGACCTCTCGCTCCGCCCTCAAGGCAAGAAGATGTTGGTGCCTCTTACTGCTTCGCTTTATGTTCCTGGAACGCTCGATGATGCCGATAAGGTCTCGGTGGATGTAGGCACTGGATACTTCATTGAGAAAACAATGGCAGAAGGAAAAGATTACTGTGATCCAAAGATCAAATTGCTGAGGTCGAATTTTGACCAACTAATCGAGATGAAGCTGGGGTGA

Coding sequence (CDS)

ATGGCGTCGAGAAAAGGAGGTAGCGCCGGCGAAGGGGTGAGATCGTTGGAGTTGGAGAAGATGAGTGTCGAGCAGCTAAAAGCCTTCAAGGAACAGACTGATATGGAAGTCAATCTCCTTCACGATAGCCTCAACAACATTCGCACAGCCACTTCTCGCCTCGACATTGCCACCGCTGTGCTTCACGACCTCTCGCTCCGCCCTCAAGGCAAGAAGATGTTGGTGCCTCTTACTGCTTCGCTTTATGTTCCTGGAACGCTCGATGATGCCGATAAGGTCTCGGTGGATGTAGGCACTGGATACTTCATTGAGAAAACAATGGCAGAAGGAAAAGATTACTGTGATCCAAAGATCAAATTGCTGAGGTCGAATTTTGACCAACTAATCGAGATGAAGCTGGGGTGA

Protein sequence

MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATAVLHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKIKLLRSNFDQLIEMKLG

Homology

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BLAST of CmaCh15G007900 vs. Swiss-Prot
Match: PFD5_ARATH (Probable prefoldin subunit 5 OS=Arabidopsis thaliana GN=At5g23290 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 4.5e-46
Identity = 91/115 (79.13%), Postives = 101/115 (87.83%), Query Frame = 1


Query: 17  ELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATAVLHDLSLRPQGKKMLVP 76
           E+EKM ++QLKA KEQ D+EVNLL DSLNNIRTAT RLD A A L+DLSLRPQGKKMLVP
Sbjct: 9   EMEKMGIDQLKALKEQADLEVNLLQDSLNNIRTATVRLDAAAAALNDLSLRPQGKKMLVP 68

Query: 77  LTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKIKLLRSNFDQLIEM 132
           LTASLYVPGTLD+ADKV VD+GTGYFIEKTM +GKDYC  KI LL+SNFDQL E+
Sbjct: 69  LTASLYVPGTLDEADKVLVDIGTGYFIEKTMDDGKDYCQRKINLLKSNFDQLFEV 123

[Close]

BLAST of CmaCh15G007900 vs. Swiss-Prot
Match: PFD5_HUMAN (Prefoldin subunit 5 OS=Homo sapiens GN=PFDN5 PE=1 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 9.7e-17
Identity = 42/115 (36.52%), Postives = 71/115 (61.74%), Query Frame = 1


Query: 14  RSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATAVLHDLSLRPQGKKM 73
           +S+ + ++++ QL+  K Q D EV  L  S+  ++   ++   A   L+ L+   +GK++
Sbjct: 3   QSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKEL 62

Query: 74  LVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKIKLLRSNFDQL 129
           LVPLT+S+YVPG L D + V +DVGTGY++EKT  + KD+   KI  L    +++
Sbjct: 63  LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 117

[Close]

BLAST of CmaCh15G007900 vs. Swiss-Prot
Match: PFD5_MOUSE (Prefoldin subunit 5 OS=Mus musculus GN=Pfdn5 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 9.7e-17
Identity = 42/115 (36.52%), Postives = 71/115 (61.74%), Query Frame = 1


Query: 14  RSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATAVLHDLSLRPQGKKM 73
           +S+ + ++++ QL+  K Q D EV  L  S+  ++   ++   A   L+ L+   +GK++
Sbjct: 3   QSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKEL 62

Query: 74  LVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKIKLLRSNFDQL 129
           LVPLT+S+YVPG L D + V +DVGTGY++EKT  + KD+   KI  L    +++
Sbjct: 63  LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 117

[Close]

BLAST of CmaCh15G007900 vs. Swiss-Prot
Match: PFD5_PONAB (Prefoldin subunit 5 OS=Pongo abelii GN=PFDN5 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 9.7e-17
Identity = 42/115 (36.52%), Postives = 71/115 (61.74%), Query Frame = 1


Query: 14  RSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATAVLHDLSLRPQGKKM 73
           +S+ + ++++ QL+  K Q D EV  L  S+  ++   ++   A   L+ L+   +GK++
Sbjct: 3   QSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKEL 62

Query: 74  LVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKIKLLRSNFDQL 129
           LVPLT+S+YVPG L D + V +DVGTGY++EKT  + KD+   KI  L    +++
Sbjct: 63  LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 117

[Close]

BLAST of CmaCh15G007900 vs. Swiss-Prot
Match: PFD5_BOVIN (Prefoldin subunit 5 OS=Bos taurus GN=PFDN5 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-16
Identity = 42/115 (36.52%), Postives = 70/115 (60.87%), Query Frame = 1


Query: 14  RSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATAVLHDLSLRPQGKKM 73
           +S+ + ++++ QL+  K Q D EV  L  S+  ++   ++   A   L+ L    +GK++
Sbjct: 3   QSVNITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLKKNNEGKEL 62

Query: 74  LVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKIKLLRSNFDQL 129
           LVPLT+S+YVPG L D + V +DVGTGY++EKT  + KD+   KI  L    +++
Sbjct: 63  LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 117

[Close]

BLAST of CmaCh15G007900 vs. TrEMBL
Match: A0A0A0KMS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G352600 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 6.7e-57
Identity = 120/134 (89.55%), Postives = 128/134 (95.52%), Query Frame = 1


Query: 1   MASRKGGSAG-EGVRS--LELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIA 60
           MASRKGGS+G EGVRS  LELEKMSVEQL+AFKEQTDMEVNLLHDSLNNIRTATSRLDIA
Sbjct: 1   MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIA 60

Query: 61  TAVLHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPK 120
           +A LHDLSLRPQGK+MLVPLTASLYVPGTLD+ADKV VDVGTGYFIEKTMA+GKDYC+ K
Sbjct: 61  SAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERK 120

Query: 121 IKLLRSNFDQLIEM 132
           IKLLRSNFDQLIE+
Sbjct: 121 IKLLRSNFDQLIEI 134

[Close]

BLAST of CmaCh15G007900 vs. TrEMBL
Match: A0A067L0B0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05973 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 9.4e-51
Identity = 104/133 (78.20%), Postives = 117/133 (87.97%), Query Frame = 1


Query: 1   MASRKGGSAGEG--VRSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIAT 60
           MAS KGG  G    +R  E+E+MS+EQLKAFKEQTD+EVNLL DSLNNIRTAT RL+ A+
Sbjct: 1   MASSKGGGGGSSPMIRVAEMERMSIEQLKAFKEQTDLEVNLLQDSLNNIRTATGRLENAS 60

Query: 61  AVLHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKI 120
           + LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKV VD+GTGYF+EKTMAEGKDYC+ KI
Sbjct: 61  SALHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDIGTGYFVEKTMAEGKDYCERKI 120

Query: 121 KLLRSNFDQLIEM 132
            LL+SNFDQLIE+
Sbjct: 121 NLLKSNFDQLIEL 133

[Close]

BLAST of CmaCh15G007900 vs. TrEMBL
Match: B9S4J8_RICCO (Prefoldin subunit, putative OS=Ricinus communis GN=RCOM_0809120 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.0e-49
Identity = 104/130 (80.00%), Postives = 115/130 (88.46%), Query Frame = 1


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATAV 60
           MAS KGG A    R  E+EKMSVEQLKA KEQTD+EVNLL DSLNNIRTAT+RL+IA+  
Sbjct: 1   MASSKGGGAA---RIGEMEKMSVEQLKALKEQTDLEVNLLQDSLNNIRTATTRLEIASTA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKV VD+GTGYF+EKTM+EGKDYC+ KI L
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDIGTGYFVEKTMSEGKDYCERKINL 120

Query: 121 LRSNFDQLIE 131
           L+SNFDQLIE
Sbjct: 121 LKSNFDQLIE 127

[Close]

BLAST of CmaCh15G007900 vs. TrEMBL
Match: B9H5Q0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s09240g PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 3.9e-49
Identity = 103/132 (78.03%), Postives = 114/132 (86.36%), Query Frame = 1


Query: 1   MASRKGGSAGEGV-RSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATA 60
           MAS KGG+    V R+ E+EKMSVEQLKA KEQTD+EVNLL DSLNNI+TAT RL+I   
Sbjct: 1   MASSKGGATSPAVLRASEMEKMSVEQLKALKEQTDLEVNLLQDSLNNIKTATGRLEITAT 60

Query: 61  VLHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKIK 120
            LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKV VD+GTGYF+EKTM EGKDYC+ KI 
Sbjct: 61  SLHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDIGTGYFVEKTMNEGKDYCERKIN 120

Query: 121 LLRSNFDQLIEM 132
           LL+SNFDQLIE+
Sbjct: 121 LLKSNFDQLIEL 132

[Close]

BLAST of CmaCh15G007900 vs. TrEMBL
Match: A0A0D2M5D8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G015400 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-48
Identity = 100/131 (76.34%), Postives = 116/131 (88.55%), Query Frame = 1


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATAV 60
           MAS +GG + + +R+ ++EKMS++QLKA KEQ D+EVNLL DSLNNIR AT RL+ A+A 
Sbjct: 1   MASSRGGGSQQVIRTGDMEKMSLDQLKAVKEQADIEVNLLQDSLNNIRAATGRLENASAA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKV VDVGTGYF+EKTMAEGKDYC+ KI L
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFVEKTMAEGKDYCERKINL 120

Query: 121 LRSNFDQLIEM 132
           L+SNFDQLIE+
Sbjct: 121 LKSNFDQLIEV 131

[Close]

BLAST of CmaCh15G007900 vs. TAIR10
Match: AT5G23290.1 (AT5G23290.1 prefoldin 5)

HSP 1 Score: 185.3 bits (469), Expect = 2.5e-47
Identity = 91/115 (79.13%), Postives = 101/115 (87.83%), Query Frame = 1


Query: 17  ELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATAVLHDLSLRPQGKKMLVP 76
           E+EKM ++QLKA KEQ D+EVNLL DSLNNIRTAT RLD A A L+DLSLRPQGKKMLVP
Sbjct: 9   EMEKMGIDQLKALKEQADLEVNLLQDSLNNIRTATVRLDAAAAALNDLSLRPQGKKMLVP 68

Query: 77  LTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKIKLLRSNFDQLIEM 132
           LTASLYVPGTLD+ADKV VD+GTGYFIEKTM +GKDYC  KI LL+SNFDQL E+
Sbjct: 69  LTASLYVPGTLDEADKVLVDIGTGYFIEKTMDDGKDYCQRKINLLKSNFDQLFEV 123

[Close]

BLAST of CmaCh15G007900 vs. NCBI nr
Match: gi|449464306|ref|XP_004149870.1| (PREDICTED: probable prefoldin subunit 5 [Cucumis sativus])

HSP 1 Score: 228.0 bits (580), Expect = 9.6e-57
Identity = 120/134 (89.55%), Postives = 128/134 (95.52%), Query Frame = 1


Query: 1   MASRKGGSAG-EGVRS--LELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIA 60
           MASRKGGS+G EGVRS  LELEKMSVEQL+AFKEQTDMEVNLLHDSLNNIRTATSRLDIA
Sbjct: 1   MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIA 60

Query: 61  TAVLHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPK 120
           +A LHDLSLRPQGK+MLVPLTASLYVPGTLD+ADKV VDVGTGYFIEKTMA+GKDYC+ K
Sbjct: 61  SAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERK 120

Query: 121 IKLLRSNFDQLIEM 132
           IKLLRSNFDQLIE+
Sbjct: 121 IKLLRSNFDQLIEI 134

[Close]

BLAST of CmaCh15G007900 vs. NCBI nr
Match: gi|802600244|ref|XP_012072842.1| (PREDICTED: probable prefoldin subunit 5 [Jatropha curcas])

HSP 1 Score: 207.6 bits (527), Expect = 1.3e-50
Identity = 104/133 (78.20%), Postives = 117/133 (87.97%), Query Frame = 1


Query: 1   MASRKGGSAGEG--VRSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIAT 60
           MAS KGG  G    +R  E+E+MS+EQLKAFKEQTD+EVNLL DSLNNIRTAT RL+ A+
Sbjct: 1   MASSKGGGGGSSPMIRVAEMERMSIEQLKAFKEQTDLEVNLLQDSLNNIRTATGRLENAS 60

Query: 61  AVLHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKI 120
           + LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKV VD+GTGYF+EKTMAEGKDYC+ KI
Sbjct: 61  SALHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDIGTGYFVEKTMAEGKDYCERKI 120

Query: 121 KLLRSNFDQLIEM 132
            LL+SNFDQLIE+
Sbjct: 121 NLLKSNFDQLIEL 133

[Close]

BLAST of CmaCh15G007900 vs. NCBI nr
Match: gi|1000962081|ref|XP_015575807.1| (PREDICTED: probable prefoldin subunit 5 isoform X3 [Ricinus communis])

HSP 1 Score: 203.4 bits (516), Expect = 2.5e-49
Identity = 104/131 (79.39%), Postives = 116/131 (88.55%), Query Frame = 1


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATAV 60
           MAS KGG A    R  E+EKMSVEQLKA KEQTD+EVNLL DSLNNIRTAT+RL+IA+  
Sbjct: 1   MASSKGGGAA---RIGEMEKMSVEQLKALKEQTDLEVNLLQDSLNNIRTATTRLEIASTA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKV VD+GTGYF+EKTM+EGKDYC+ KI L
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDIGTGYFVEKTMSEGKDYCERKINL 120

Query: 121 LRSNFDQLIEM 132
           L+SNFDQLIE+
Sbjct: 121 LKSNFDQLIEL 128

[Close]

BLAST of CmaCh15G007900 vs. NCBI nr
Match: gi|255559796|ref|XP_002520917.1| (PREDICTED: probable prefoldin subunit 5 isoform X1 [Ricinus communis])

HSP 1 Score: 202.6 bits (514), Expect = 4.3e-49
Identity = 104/130 (80.00%), Postives = 115/130 (88.46%), Query Frame = 1


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATAV 60
           MAS KGG A    R  E+EKMSVEQLKA KEQTD+EVNLL DSLNNIRTAT+RL+IA+  
Sbjct: 1   MASSKGGGAA---RIGEMEKMSVEQLKALKEQTDLEVNLLQDSLNNIRTATTRLEIASTA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKV VD+GTGYF+EKTM+EGKDYC+ KI L
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDIGTGYFVEKTMSEGKDYCERKINL 120

Query: 121 LRSNFDQLIE 131
           L+SNFDQLIE
Sbjct: 121 LKSNFDQLIE 127

[Close]

BLAST of CmaCh15G007900 vs. NCBI nr
Match: gi|1000962078|ref|XP_015575806.1| (PREDICTED: probable prefoldin subunit 5 isoform X2 [Ricinus communis])

HSP 1 Score: 202.6 bits (514), Expect = 4.3e-49
Identity = 104/130 (80.00%), Postives = 115/130 (88.46%), Query Frame = 1


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATAV 60
           MAS KGG A    R  E+EKMSVEQLKA KEQTD+EVNLL DSLNNIRTAT+RL+IA+  
Sbjct: 1   MASSKGGGAA---RIGEMEKMSVEQLKALKEQTDLEVNLLQDSLNNIRTATTRLEIASTA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKV VD+GTGYF+EKTM+EGKDYC+ KI L
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDIGTGYFVEKTMSEGKDYCERKINL 120

Query: 121 LRSNFDQLIE 131
           L+SNFDQLIE
Sbjct: 121 LKSNFDQLIE 127

The following BLAST results are available for this feature:

BLAST of CmaCh15G007900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PFD5_ARATH	4.5e-46	79.13	Probable prefoldin subunit 5 OS=Arabidopsis thaliana GN=At5g23290 PE=2 SV=1	[more]
PFD5_HUMAN	9.7e-17	36.52	Prefoldin subunit 5 OS=Homo sapiens GN=PFDN5 PE=1 SV=2	[more]
PFD5_MOUSE	9.7e-17	36.52	Prefoldin subunit 5 OS=Mus musculus GN=Pfdn5 PE=1 SV=1	[more]
PFD5_PONAB	9.7e-17	36.52	Prefoldin subunit 5 OS=Pongo abelii GN=PFDN5 PE=2 SV=1	[more]
PFD5_BOVIN	1.3e-16	36.52	Prefoldin subunit 5 OS=Bos taurus GN=PFDN5 PE=2 SV=1	[more]

BLAST of CmaCh15G007900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMS5_CUCSA	6.7e-57	89.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G352600 PE=4 SV=1	[more]
A0A067L0B0_JATCU	9.4e-51	78.20	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05973 PE=4 SV=1	[more]
B9S4J8_RICCO	3.0e-49	80.00	Prefoldin subunit, putative OS=Ricinus communis GN=RCOM_0809120 PE=4 SV=1	[more]
B9H5Q0_POPTR	3.9e-49	78.03	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s09240g PE=4 SV=1	[more]
A0A0D2M5D8_GOSRA	1.1e-48	76.34	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G015400 PE=4 SV=1	[more]

BLAST of CmaCh15G007900 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23290.1	2.5e-47	79.13	prefoldin 5	[more]

BLAST of CmaCh15G007900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464306\|ref\|XP_004149870.1\|	9.6e-57	89.55	PREDICTED: probable prefoldin subunit 5 [Cucumis sativus]	[more]
gi\|802600244\|ref\|XP_012072842.1\|	1.3e-50	78.20	PREDICTED: probable prefoldin subunit 5 [Jatropha curcas]	[more]
gi\|1000962081\|ref\|XP_015575807.1\|	2.5e-49	79.39	PREDICTED: probable prefoldin subunit 5 isoform X3 [Ricinus communis]	[more]
gi\|255559796\|ref\|XP_002520917.1\|	4.3e-49	80.00	PREDICTED: probable prefoldin subunit 5 isoform X1 [Ricinus communis]	[more]
gi\|1000962078\|ref\|XP_015575806.1\|	4.3e-49	80.00	PREDICTED: probable prefoldin subunit 5 isoform X2 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004127	Prefoldin_subunit_alpha
IPR009053	Prefoldin
IPR011599	PFD_alpha_archaea

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016272	prefoldin complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0051082	unfolded protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0051082	unfolded protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G007900.1	CmaCh15G007900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004127	Prefoldin alpha-like	PFAM	PF02996	Prefoldin	coord: 36..129 score: 2.8
IPR009053	Prefoldin	GENE3D	G3DSA:1.10.287.370		coord: 22..130 score: 2.2
IPR009053	Prefoldin	unknown	SSF46579	Prefoldin	coord: 22..130 score: 6.8
IPR011599	Prefoldin alpha subunit, archaea-type	TIGRFAMs	TIGR00293	TIGR00293	coord: 23..129 score: 9.0
None	No IPR available	PANTHER	PTHR12674	PREFOLDIN SUBUNIT 5	coord: 6..131 score: 7.1
None	No IPR available	PANTHER	PTHR12674:SF2	PREFOLDIN SUBUNIT 5	coord: 6..131 score: 7.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G007900	Cucsa.013970	Cucumber (Gy14) v1	cgycmaB0603
CmaCh15G007900	Cla009085	Watermelon (97103) v1	cmawmB279
CmaCh15G007900	Csa5G352600	Cucumber (Chinese Long) v2	cmacuB297
CmaCh15G007900	MELO3C005064	Melon (DHL92) v3.5.1	cmameB252
CmaCh15G007900	ClCG01G008100	Watermelon (Charleston Gray)	cmawcgB260
CmaCh15G007900	CSPI05G13840	Wild cucumber (PI 183967)	cmacpiB299
CmaCh15G007900	CmoCh04G023450	Cucurbita moschata (Rifu)	cmacmoB309
CmaCh15G007900	Lsi09G008610	Bottle gourd (USVL1VR-Ls)	cmalsiB268
CmaCh15G007900	Cp4.1LG13g05590	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G007900	Cp4.1LG01g19500	Cucurbita pepo (Zucchini)	cmacpeB318
CmaCh15G007900	MELO3C033736.2	Melon (DHL92) v3.6.1	cmamedB286
CmaCh15G007900	CsaV3_5G020730	Cucumber (Chinese Long) v3	cmacucB0344
CmaCh15G007900	Cla97C01G008450	Watermelon (97103) v2	cmawmbB289
CmaCh15G007900	CsGy5G013690	Cucumber (Gy14) v2	cgybcmaB603
CmaCh15G007900	Carg17776	Silver-seed gourd	carcmaB0664
CmaCh15G007900	Carg01415	Silver-seed gourd	carcmaB1148

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh15G007900	CmaCh04G022440	Cucurbita maxima (Rimu)	cmacmaB325

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G007900	Wax gourd	cmawgoB0373
CmaCh15G007900	Cucurbita moschata (Rifu)	cmacmoB287