Cucsa.013970 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.013970
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Prefoldin subunit 5
Location	scaffold00178 : 83965 .. 89264 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGATATGTTTTATACGGATAAAAAGGAAATTTCTTTTTAACCATAATCCTTCCATCAGTTAATCCCTTTTTCCACATTCATTTCCCCGACTTTACTTGCCCAAACGGCCCCATTGGATCAAAAAGAAAGAAGTCTGGTCTGAAACTCGGAAAGTGAATCGAACCAAAGCGATGGCGTCGAGAAAAGGAGGGAGCAGCGGCGGCGAAGGGGTGAGATCGTTAGAGTTGGAGTTGGAGAAGATGAGTGTGGAGCAACTCAGAGCCTTCAAGGAACAGACTGATATGGAAGTCAATCTCCTTCATGACAGCCTTAACAACATTCGCACAGCCACTTCTCGCCTCGACATTGCTTCTGCTGCACTCCATGATCTCTCGCTCCGTCCTCAAGGTTGGTTCCTTTCTCTTTTTTCATTTCTTCTTCACAATTTAATCTTTTTTTATGTGGCTATTTGGTGATTTTTTCTTCTGTTTAATTAGGCAAGAGGATGTTGGTGCCTCTTACTGCGTCGCTTTATGTTCCTGGGACGCTTGATGAGGCCGATAAAGTATTGGTGGATGTAGGCACTGGATACTTCATTGAGGTCAGTTTTGGTGGGATTTTGTACTTGATTAACATTCACTTTTTTTCTTCACAAAAAAAGATTGAAATTCTATCTGGTGTTTATATGATTTTATTTACCGAACGAGCTTGATTTTCTCAATTTATTGTTGCGCCTTTTGTCGAGCGATGCCAATACCCCATTTGATAACCATTTGATTTTTGAAAATAGGTCTTGTTTTCTCACCATTTCTTTACAATTGTCTTCAGCTTTCTCAATATAAGATTTAAATCTTACCCAAATATAAAAACCAAAAACAACTTTTTAAAATTTGAGATTTTAGTTTTCAAAACTTGGCTTCAATTTTTTTGAAAACATTGTTGAGTAGATAACAAATCAAAGAAACCCATAGGTAGAAGTGTAGGAAACAAAAATTTAAAACTAGAATCCAAATGGTTTTCAAACAGGATCCGAATGACTTACTTGCAGATTTACCTTCTAAATAGAGCACTTCATCTAGATAAATCTTTCCTACCTATCAGAATTTGTTCTGATTCATTAGCATTGATTGATGCTGGTTGTTATTTTCAATTAGGAACTTACTACTCAATGAGTAAGATCCATCTTTGTGAAAATAATATCACTTTATCATGTATTGATGTTAGTAATGTGTTCTCATGATCTGATGGTTGAATCAGAAAACAATGGCTGATGGAAAAGATTACTGTGAGCGAAAGATCAAATTGCTGAGGTCGAATTTTGACCAACTAATCGAGGTATTTTTACTATTTTGAAGTTGAATTTGGAATAAAAAGTTTTCAAGTTAGCATGATATCAAAAGAAGTGTTGATATCTGAACGTCTGAACCATGTATTGTAGTTCCATGATGTTAATTCTGCAACATTGTTTGTGAATGAAATATAGCATAAAAACGTTGGTAGTTGCTATGATCATAACAAATTTTTTGAACTAAAAAGTGAGAAGTTTCTTTCAAAATGTTTTAAAGCATGAAAAACTAAATTGATTGAACACACGTAGTATTTTTTAAAATAGGAAAGAACAGATGAAATTGTTGTTAAATGAGGTCTTAAATATTTGAGTTATTGTATAAAATTGTCTTTATTTCTATTTTTTTTTTTTATCAATTTACGTTTAATCCTATATTCTTCTTTAGAGATGCAAAAATCCCTTTGATATTCCATGTAGGAAGCCAGGTTCTAATATCTTGACTTTGTGCTATGTCTATGATTGGAGGTGAATGGTTTTCTGTCACTTAATTTTGAAGCAGTCCTCACTAGCACTGTAGGTACTGGACATGATCGTCGGTAGGGAATCTGGGTTTTTGGTAGACTTTATTTTGCAAAGAAAAGTTTATTTCTGAGTCATTTGTTTTTTGGTAGACTTTATTTAGCGAAGCAAAATTTAGTTGTCTTGAGGAATGTGACTTGTGAGGCCTTCAGAGATCCCAAAAATAGTACGGCATATCACATCTACTTAGCTATTTGAAAGGGATGCTGTGAGACGAGAGCCCTTCCCAGAAGCTCATGATATAACCTTAAAGATTCTCTTGAAATATCCTTATCAGTAATTTTCTGAGTTTTTCACAATAGTGTTTACAATGTTATTTTTGAGAGAAGTAACGACTTTCATTGAGAAAAAATGAAAGAGTACAAGAGCATCCAAAGAACAAGCCCACAAAAAAACCCCACCTAAAATAAGGGGTTTCAACTAAGTAAAATGTTACTGAGGGAATGGTTACAGAAGGTCTTTGATACCAAAGCCCAAAGTAACACATGAAATCTCACTAAAGACTAGACCTCATGATTCTTTTCCTTACCTGTAAACACCAGATCATTTCTCTCATTCCTCTCATCGAAAATATCCCAAATTACAACACCCACCCTTGCAAACCGCAGAAAATGGCCTTTCTCCTTGAAAGGCGGATGGAGGAGGAACTCCTCAATTGTCGTCCGAACACTTCTTTGGCCAGCAAAACTGAACTCTCGCAAGAAAGAGCTCCACACAAACCACTCATACTGACACTCCCAAAAGAAATGATCAAGATCTTCCTCCACCTTCCAACAAAGAATACAACAGAAAGACCTAACAAGCGAGCTTCTCCTCCTAACAAGCCTATCAATAGTGTTCACACATCCAAGCAAAACTTGCCAGATAAAGAGGCTCAGTTTCTTCGGAACCTTAATCCTCCAAACAATGTAAAAAGCAAGCTCTCTAAAGGGAGAGGGATCCAACAACAAAGAGAAAAAGGACTTACATGAAAAACCATGACTGGGGTTAGGACTCCAAACAAAAACATCCCTTCTCCCCTACCCTACAATACTCCAAATGAAACGAGAGAAGGTTGGAAGCTCAAAGGAAATGTCTTTCCAAGGACTTTTGTGTGTGCCTTTAACCCCTTTCTCCACCCAAACAAAAGGATGGAGGTCATGCTTGCTCACGATGATCTACCACCATAAAGTATTCACAATGTTATAACTTTTTATTTATAGAATTTTTATTTGAATTTGTTTATTGTTTGCACCTTAAGTTTTTAAAAAAATCATGCTTAAGTTTTGAACAGCTGTTGTGCATTAGTATTCCTCATACTTCACAGTCTCCTCTCCTATCAGAAACCCAAGAATGGAGATCATTTTCATTTAATTTACTCGGAAGTTTATGCTTATGCTGTTAGCAGATTCTTTGATAACGAGGAAAATGAGTTAGTTTCCTAGGTACTTTGTGAAAAAGGCCTATTATTTCCTGTGTACTGTTAGTGTAGGGAAGAATTTTAAGAAGGTGCTTGTGTGAGTGGTCGCTACCCATAAGTTTAGGCCGTACTTCTAGGCTATTTGACATGTACCACGTACCATCTTTACCTTGTAAATTAGTTCCCACGAGTTTGATTGACTTGTCAAGGTGAGTAGCTAATCCAAGTGGTTCAACAACATAGGACGAAATATGGAGTTCAAGCTCTCATCATAGCGTCTAATCTTGTTAAGTAACTAAGAGAGCAAGGAGGATCCAGATTTTTAGCAGCCGCTCAGCTAAATATTGCAAATTCAAGTCTTCAACTATCACTTGTAATCCTGAATCTCTCGATTAGAGAGTAGTCACACCAACAAACATGCTAACGCAGGGATATAACATTTCTCTCCTGCTTGTCCATGGATTTTTGAAAAATTCAAGCATCTTAGAGCTAGAGAGTTAGGAATTTATTTAGTGAACCGTGCTTCTTTGGCTTGACAATGGGCTTTGAATTATTAAGTACAGTTCCAGTAGATGACAGAATTCCATGGGGACCTAGGTGTTTAAAGTGATCCTTTGTCATCATACAGCTGTCAGAGTATGTAGGCTAAGGTGCATCTCAGCACATGTATGGCTGGTCATGTTTCGTCACTCTAGGCAATCCAAACTTCACAGTGTGGTCGTGTCGATCATTTTGGTCTGAGTTCAGACAATTGACAACCTTGTCAAAGCTAATTCTAAGTTTTCCAACAAACACCGTATATCCAAGGCTAATTCTCTCTATCAATGTAATATTGTTTTGGCAATTGAACCACTAAACACCTTGTCTAGCACAGTTCGAGCGTTCGATCACTTTCATAGATTTCCATAGTTTACCTTTGCATTTGCTAGTGTTTAGGCAAGTGTGAATTACGAGTATGAGTCCCCTAGCAGTAATGGTCCAAACCTAACCATGTCCTTGTCCCTTGAAGAGTGACCTTGGGCTTAAAGTTTTTTAGGGGGAACTAGAGGGGTGTGCTCACTAGTGGATTTAGTCAAGGATCAGGGGGCTCAAGCCCCACTCAACTTTAGGCTCTTTATATAATATATATATATAAAAACTGAAATAATATCAATATCAGAAGTTAGCCTAGTGGTAAAACTATCTCTTAGCCCCCTCTAGACCCAGGTTCCATCCTACTCCTTTTTTTTTCAGATTATTTTTACTAAACTATAAAACCTCCATCAACAAAATTTCTGGATCCACCGTTCGGTCTGCTACCTTTGGGTGAAAATCAAGGTGGGGCTGGCCTCAGTTTCAGATAAAAAAAAAAAAGTGTAAATGTACACAAATTTTGTTTTATCTCCAAACCATCTTTGGCTAGTGGTCATTAAGGATCTTGGATTTAATAAGGAAATAAGAAGGATGAGTTCGATTTTTGAAGGTCACCTACCTAAGATTTATTGTACGAATTTCCTTGGCAACCAAATATTGCAGTCTAGTAGGTTGTCCCATGAAATCGGTGAGGTGAAAGCAAGTTCGTCTGGATACCTTGTAAATGTAGATATAAAAAATTTAACATTTATTTCCTTGGAAAATGTATATTTTGATTATTTTACAATTTCAACGTGCAGATTGCTACTAAAAAGAAGAAAGTAGCAGATGAAGCTGGCTTGATCTTACAAGCAAAACTGAGGCAGATGGGTGCCACAGCATAGGAAGATGTGTGACCATGAAGGCATTGATCGGTTAGTTAAACATAACCATTGAAGAATTCCAGAACAGCCAAACTTTTAGAGTAGAGATATGTGGATGAAATTAGAGGGGCCGGGTTCACGTCGGTATTTGAGGTGTTGGTTAATCTGTAAACTTCTTCAAGTACTCACTAGATGGTTAGAATATTACCATTTCTTGTGTGTAGTGACTTGTGAGGAGAGGAAGATCTATATGGCCACTAGAACCTATTGATGAAATATTTAACGACTCTTCTTTATTCAATGGATCATATGATTGTTGTGCATTTTTAGTTAGCATGTC

mRNA sequence

ggatATGTTTTATACGGATAAAAAGGAAATTTCTTTTTAACCATAATCCTTCCATCAGTTAATCCCTTTTTCCACATTCATTTCCCCGACTTTACTTGCCCAAACGGCCCCATTGGATCAAAAAGAAAGAAGTCTGGTCTGAAACTCGGAAAGTGAATCGAACCAAAGCGATGGCGTCGAGAAAAGGAGGGAGCAGCGGCGGCGAAGGGGTGAGATCGTTAGAGTTGGAGTTGGAGAAGATGAGTGTGGAGCAACTCAGAGCCTTCAAGGAACAGACTGATATGGAAGTCAATCTCCTTCATGACAGCCTTAACAACATTCGCACAGCCACTTCTCGCCTCGACATTGCTTCTGCTGCACTCCATGATCTCTCGCTCCGTCCTCAAGGCAAGAGGATGTTGGTGCCTCTTACTGCGTCGCTTTATGTTCCTGGGACGCTTGATGAGGCCGATAAAGTATTGGTGGATGTAGGCACTGGATACTTCATTGAGAAAACAATGGCTGATGGAAAAGATTACTGTGAGCGAAAGATCAAATTGCTGAGGTCGAATTTTGACCAACTAATCGAGTCCTCACTAGCACTGTAGATTGCTACTAAAAAGAAGAAAGTAGCAGATGAAGCTGGCTTGATCTTACAAGCAAAACTGAGGCAGATGGGTGCCACAGCATAGGAAGATGTGTGACCATGAAGGCATTGATCGGTTAGTTAAACATAACCATTGAAGAATTCCAGAACAGCCAAACTTTTAGAGTAGAGATATGTGGATGAAATTAGAGGGGCCGGGTTCACGTCGGTATTTGAGGTGTTGGTTAATCTGTAAACTTCTTCAAGTACTCACTAGATGGTTAGAATATTACCATTTCTTGTGTGTAGTGACTTGTGAGGAGAGGAAGATCTATATGGCCACTAGAACCTATTGATGAAATATTTAACGACTCTTCTTTATTCAATGGATCATATGATTGTTGTGCATTTTTAGTTAGCATGTC

Coding sequence (CDS)

ATGGCGTCGAGAAAAGGAGGGAGCAGCGGCGGCGAAGGGGTGAGATCGTTAGAGTTGGAGTTGGAGAAGATGAGTGTGGAGCAACTCAGAGCCTTCAAGGAACAGACTGATATGGAAGTCAATCTCCTTCATGACAGCCTTAACAACATTCGCACAGCCACTTCTCGCCTCGACATTGCTTCTGCTGCACTCCATGATCTCTCGCTCCGTCCTCAAGGCAAGAGGATGTTGGTGCCTCTTACTGCGTCGCTTTATGTTCCTGGGACGCTTGATGAGGCCGATAAAGTATTGGTGGATGTAGGCACTGGATACTTCATTGAGAAAACAATGGCTGATGGAAAAGATTACTGTGAGCGAAAGATCAAATTGCTGAGGTCGAATTTTGACCAACTAATCGAGTCCTCACTAGCACTGTAG

Protein sequence

MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERKIKLLRSNFDQLIESSLAL*

Homology

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BLAST of Cucsa.013970 vs. Swiss-Prot
Match: PFD5_ARATH (Probable prefoldin subunit 5 OS=Arabidopsis thaliana GN=At5g23290 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.7e-58
Identity = 110/139 (79.14%), Postives = 127/139 (91.37%), Query Frame = 1


Query: 20  ELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVP 79
           E+EKM ++QL+A KEQ D+EVNLL DSLNNIRTAT RLD A+AAL+DLSLRPQGK+MLVP
Sbjct: 9   EMEKMGIDQLKALKEQADLEVNLLQDSLNNIRTATVRLDAAAAALNDLSLRPQGKKMLVP 68

Query: 80  LTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERKIKLLRSNFDQLIEIATKKK 139
           LTASLYVPGTLDEADKVLVD+GTGYFIEKTM DGKDYC+RKI LL+SNFDQL E+A KKK
Sbjct: 69  LTASLYVPGTLDEADKVLVDIGTGYFIEKTMDDGKDYCQRKINLLKSNFDQLFEVAAKKK 128

Query: 140 KVADEAGLILQAKLRQMGA 159
            VADEAG++LQAK++Q+ A
Sbjct: 129 SVADEAGMVLQAKVKQLTA 147

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BLAST of Cucsa.013970 vs. Swiss-Prot
Match: PFD5_PONAB (Prefoldin subunit 5 OS=Pongo abelii GN=PFDN5 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-19
Identity = 48/140 (34.29%), Postives = 81/140 (57.86%), Query Frame = 1


Query: 19  LELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLV 78
           + + ++++ QL   K Q D EV  L  S+  ++   ++   A   L+ L+   +GK +LV
Sbjct: 5   INITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLV 64

Query: 79  PLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERKIKLLRSNFDQLIEIATKK 138
           PLT+S+YVPG L + + VL+DVGTGY++EKT  D KD+ +RKI  L    +++     +K
Sbjct: 65  PLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEK 124

Query: 139 KKVADEAGLILQAKLRQMGA 159
             +      ++  K+RQ+ A
Sbjct: 125 HAMKQAVMEMMSQKIRQLTA 144

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BLAST of Cucsa.013970 vs. Swiss-Prot
Match: PFD5_MOUSE (Prefoldin subunit 5 OS=Mus musculus GN=Pfdn5 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.6e-19
Identity = 47/140 (33.57%), Postives = 81/140 (57.86%), Query Frame = 1


Query: 19  LELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLV 78
           + + ++++ QL   K Q D EV  L  S+  ++   ++   A   L+ L+   +GK +LV
Sbjct: 5   INITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLV 64

Query: 79  PLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERKIKLLRSNFDQLIEIATKK 138
           PLT+S+YVPG L + + VL+DVGTGY++EKT  D KD+ +RKI  L    +++     +K
Sbjct: 65  PLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEK 124

Query: 139 KKVADEAGLILQAKLRQMGA 159
             +      ++  K++Q+ A
Sbjct: 125 HAMKQAVMEMMSQKIQQLTA 144

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BLAST of Cucsa.013970 vs. Swiss-Prot
Match: PFD5_HUMAN (Prefoldin subunit 5 OS=Homo sapiens GN=PFDN5 PE=1 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 5.6e-19
Identity = 47/140 (33.57%), Postives = 81/140 (57.86%), Query Frame = 1


Query: 19  LELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLV 78
           + + ++++ QL   K Q D EV  L  S+  ++   ++   A   L+ L+   +GK +LV
Sbjct: 5   INITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLV 64

Query: 79  PLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERKIKLLRSNFDQLIEIATKK 138
           PLT+S+YVPG L + + VL+DVGTGY++EKT  D KD+ +RKI  L    +++     +K
Sbjct: 65  PLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEK 124

Query: 139 KKVADEAGLILQAKLRQMGA 159
             +      ++  K++Q+ A
Sbjct: 125 HAMKQAVMEMMSQKIQQLTA 144

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BLAST of Cucsa.013970 vs. Swiss-Prot
Match: PFD5_BOVIN (Prefoldin subunit 5 OS=Bos taurus GN=PFDN5 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18
Identity = 46/138 (33.33%), Postives = 79/138 (57.25%), Query Frame = 1


Query: 19  LELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLV 78
           + + ++++ QL   K Q D EV  L  S+  ++   ++   A   L+ L    +GK +LV
Sbjct: 5   VNITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLKKNNEGKELLV 64

Query: 79  PLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERKIKLLRSNFDQLIEIATKK 138
           PLT+S+YVPG L + + VL+DVGTGY++EKT  D KD+ +RKI  L    +++     +K
Sbjct: 65  PLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEK 124

Query: 139 KKVADEAGLILQAKLRQM 157
             +      ++  K++Q+
Sbjct: 125 HAMKQAVMEMMSQKIQQL 142

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BLAST of Cucsa.013970 vs. TrEMBL
Match: A0A0A0KMS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G352600 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 6.1e-81
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1


Query: 1   MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIA 60
           MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIA
Sbjct: 1   MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIA 60

Query: 61  SAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERK 120
           SAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERK
Sbjct: 61  SAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERK 120

Query: 121 IKLLRSNFDQLIEIATKKKKVADEAGLILQAKLRQMGATA 161
           IKLLRSNFDQLIEIATKKKKVADEAGLILQAKLRQMGATA
Sbjct: 121 IKLLRSNFDQLIEIATKKKKVADEAGLILQAKLRQMGATA 160

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BLAST of Cucsa.013970 vs. TrEMBL
Match: A0A067L0B0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05973 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.0e-60
Identity = 120/156 (76.92%), Postives = 139/156 (89.10%), Query Frame = 1


Query: 1   MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIA 60
           MAS KGG  GG        E+E+MS+EQL+AFKEQTD+EVNLL DSLNNIRTAT RL+ A
Sbjct: 1   MASSKGGG-GGSSPMIRVAEMERMSIEQLKAFKEQTDLEVNLLQDSLNNIRTATGRLENA 60

Query: 61  SAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERK 120
           S+ALHDLSLRPQGK+MLVPLTASLYVPGTLD+ADKVLVD+GTGYF+EKTMA+GKDYCERK
Sbjct: 61  SSALHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDIGTGYFVEKTMAEGKDYCERK 120

Query: 121 IKLLRSNFDQLIEIATKKKKVADEAGLILQAKLRQM 157
           I LL+SNFDQLIE+A+KKK VADEAG +LQA+L+Q+
Sbjct: 121 INLLKSNFDQLIELASKKKTVADEAGAVLQARLKQL 155

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BLAST of Cucsa.013970 vs. TrEMBL
Match: B9H5Q0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s09240g PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.5e-60
Identity = 121/159 (76.10%), Postives = 140/159 (88.05%), Query Frame = 1


Query: 1   MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIA 60
           MAS KGG++    +R+ E+E  KMSVEQL+A KEQTD+EVNLL DSLNNI+TAT RL+I 
Sbjct: 1   MASSKGGATSPAVLRASEME--KMSVEQLKALKEQTDLEVNLLQDSLNNIKTATGRLEIT 60

Query: 61  SAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERK 120
           + +LHDLSLRPQGK+MLVPLTASLYVPGTLD+ADKVLVD+GTGYF+EKTM +GKDYCERK
Sbjct: 61  ATSLHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDIGTGYFVEKTMNEGKDYCERK 120

Query: 121 IKLLRSNFDQLIEIATKKKKVADEAGLILQAKLRQMGAT 160
           I LL+SNFDQLIE+ATKKK VADEAG ILQAKLRQ+  T
Sbjct: 121 INLLKSNFDQLIELATKKKTVADEAGAILQAKLRQLAPT 157

[Close]

BLAST of Cucsa.013970 vs. TrEMBL
Match: A5BBT9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0042g00150 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 6.0e-60
Identity = 117/139 (84.17%), Postives = 133/139 (95.68%), Query Frame = 1


Query: 20  ELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVP 79
           E+EKMS+E L+A KEQTD+EVNLL DSLNNIRTATSRL+IASAAL+DLSLRPQGK+MLVP
Sbjct: 11  EMEKMSIEHLKALKEQTDLEVNLLQDSLNNIRTATSRLEIASAALNDLSLRPQGKKMLVP 70

Query: 80  LTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERKIKLLRSNFDQLIEIATKKK 139
           LTASLYVPG LD+ADKVLVDVGTGYFIEKTMA+GKDYCERKI LLRSN+DQL+E+ATKKK
Sbjct: 71  LTASLYVPGKLDDADKVLVDVGTGYFIEKTMAEGKDYCERKINLLRSNYDQLVEVATKKK 130

Query: 140 KVADEAGLILQAKLRQMGA 159
            +ADEAG+ILQAKL+Q+GA
Sbjct: 131 SIADEAGVILQAKLKQLGA 149

[Close]

BLAST of Cucsa.013970 vs. TrEMBL
Match: A0A0B0N580_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_16051 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.5e-58
Identity = 120/155 (77.42%), Postives = 140/155 (90.32%), Query Frame = 1


Query: 1   MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIA 60
           MAS +GGS   + +RS ++E  KMS++QL+A KEQ D+EVNLL DSLNNIRTAT RL+ A
Sbjct: 1   MASSRGGSQ--QVIRSGDME--KMSLDQLKAVKEQADIEVNLLQDSLNNIRTATGRLENA 60

Query: 61  SAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERK 120
           SAALHDLSLRPQGK+MLVPLTASLYVPGTLD+ADKVLVD+GTGYF+EKTMA+GKDYCERK
Sbjct: 61  SAALHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDIGTGYFVEKTMAEGKDYCERK 120

Query: 121 IKLLRSNFDQLIEIATKKKKVADEAGLILQAKLRQ 156
           I LL+SNFDQLIE+A+KKK +ADEAGLILQAKL+Q
Sbjct: 121 INLLKSNFDQLIEVASKKKTLADEAGLILQAKLKQ 151

[Close]

BLAST of Cucsa.013970 vs. TAIR10
Match: AT5G23290.1 (AT5G23290.1 prefoldin 5)

HSP 1 Score: 226.1 bits (575), Expect = 1.5e-59
Identity = 110/139 (79.14%), Postives = 127/139 (91.37%), Query Frame = 1


Query: 20  ELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVP 79
           E+EKM ++QL+A KEQ D+EVNLL DSLNNIRTAT RLD A+AAL+DLSLRPQGK+MLVP
Sbjct: 9   EMEKMGIDQLKALKEQADLEVNLLQDSLNNIRTATVRLDAAAAALNDLSLRPQGKKMLVP 68

Query: 80  LTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERKIKLLRSNFDQLIEIATKKK 139
           LTASLYVPGTLDEADKVLVD+GTGYFIEKTM DGKDYC+RKI LL+SNFDQL E+A KKK
Sbjct: 69  LTASLYVPGTLDEADKVLVDIGTGYFIEKTMDDGKDYCQRKINLLKSNFDQLFEVAAKKK 128

Query: 140 KVADEAGLILQAKLRQMGA 159
            VADEAG++LQAK++Q+ A
Sbjct: 129 SVADEAGMVLQAKVKQLTA 147

[Close]

BLAST of Cucsa.013970 vs. NCBI nr
Match: gi|449464306|ref|XP_004149870.1| (PREDICTED: probable prefoldin subunit 5 [Cucumis sativus])

HSP 1 Score: 308.1 bits (788), Expect = 8.8e-81
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1


Query: 1   MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIA 60
           MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIA
Sbjct: 1   MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIA 60

Query: 61  SAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERK 120
           SAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERK
Sbjct: 61  SAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERK 120

Query: 121 IKLLRSNFDQLIEIATKKKKVADEAGLILQAKLRQMGATA 161
           IKLLRSNFDQLIEIATKKKKVADEAGLILQAKLRQMGATA
Sbjct: 121 IKLLRSNFDQLIEIATKKKKVADEAGLILQAKLRQMGATA 160

[Close]

BLAST of Cucsa.013970 vs. NCBI nr
Match: gi|802600244|ref|XP_012072842.1| (PREDICTED: probable prefoldin subunit 5 [Jatropha curcas])

HSP 1 Score: 240.0 bits (611), Expect = 2.9e-60
Identity = 120/156 (76.92%), Postives = 139/156 (89.10%), Query Frame = 1


Query: 1   MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIA 60
           MAS KGG  GG        E+E+MS+EQL+AFKEQTD+EVNLL DSLNNIRTAT RL+ A
Sbjct: 1   MASSKGGG-GGSSPMIRVAEMERMSIEQLKAFKEQTDLEVNLLQDSLNNIRTATGRLENA 60

Query: 61  SAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERK 120
           S+ALHDLSLRPQGK+MLVPLTASLYVPGTLD+ADKVLVD+GTGYF+EKTMA+GKDYCERK
Sbjct: 61  SSALHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDIGTGYFVEKTMAEGKDYCERK 120

Query: 121 IKLLRSNFDQLIEIATKKKKVADEAGLILQAKLRQM 157
           I LL+SNFDQLIE+A+KKK VADEAG +LQA+L+Q+
Sbjct: 121 INLLKSNFDQLIELASKKKTVADEAGAVLQARLKQL 155

[Close]

BLAST of Cucsa.013970 vs. NCBI nr
Match: gi|1000962081|ref|XP_015575807.1| (PREDICTED: probable prefoldin subunit 5 isoform X3 [Ricinus communis])

HSP 1 Score: 239.6 bits (610), Expect = 3.8e-60
Identity = 121/156 (77.56%), Postives = 138/156 (88.46%), Query Frame = 1


Query: 1   MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIA 60
           MAS KGG +   G      E+EKMSVEQL+A KEQTD+EVNLL DSLNNIRTAT+RL+IA
Sbjct: 1   MASSKGGGAARIG------EMEKMSVEQLKALKEQTDLEVNLLQDSLNNIRTATTRLEIA 60

Query: 61  SAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERK 120
           S ALHDLSLRPQGK+MLVPLTASLYVPGTLDEADKVLVD+GTGYF+EKTM++GKDYCERK
Sbjct: 61  STALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDIGTGYFVEKTMSEGKDYCERK 120

Query: 121 IKLLRSNFDQLIEIATKKKKVADEAGLILQAKLRQM 157
           I LL+SNFDQLIE+A+KKK VADE G +LQAKL+Q+
Sbjct: 121 INLLKSNFDQLIELASKKKMVADEVGAVLQAKLKQL 150

[Close]

BLAST of Cucsa.013970 vs. NCBI nr
Match: gi|224083880|ref|XP_002307156.1| (hypothetical protein POPTR_0005s09240g [Populus trichocarpa])

HSP 1 Score: 239.2 bits (609), Expect = 5.0e-60
Identity = 121/159 (76.10%), Postives = 140/159 (88.05%), Query Frame = 1


Query: 1   MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIA 60
           MAS KGG++    +R+ E+E  KMSVEQL+A KEQTD+EVNLL DSLNNI+TAT RL+I 
Sbjct: 1   MASSKGGATSPAVLRASEME--KMSVEQLKALKEQTDLEVNLLQDSLNNIKTATGRLEIT 60

Query: 61  SAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERK 120
           + +LHDLSLRPQGK+MLVPLTASLYVPGTLD+ADKVLVD+GTGYF+EKTM +GKDYCERK
Sbjct: 61  ATSLHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDIGTGYFVEKTMNEGKDYCERK 120

Query: 121 IKLLRSNFDQLIEIATKKKKVADEAGLILQAKLRQMGAT 160
           I LL+SNFDQLIE+ATKKK VADEAG ILQAKLRQ+  T
Sbjct: 121 INLLKSNFDQLIELATKKKTVADEAGAILQAKLRQLAPT 157

[Close]

BLAST of Cucsa.013970 vs. NCBI nr
Match: gi|225462560|ref|XP_002267649.1| (PREDICTED: probable prefoldin subunit 5 [Vitis vinifera])

HSP 1 Score: 238.4 bits (607), Expect = 8.6e-60
Identity = 117/139 (84.17%), Postives = 133/139 (95.68%), Query Frame = 1


Query: 20  ELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKRMLVP 79
           E+EKMS+E L+A KEQTD+EVNLL DSLNNIRTATSRL+IASAAL+DLSLRPQGK+MLVP
Sbjct: 11  EMEKMSIEHLKALKEQTDLEVNLLQDSLNNIRTATSRLEIASAALNDLSLRPQGKKMLVP 70

Query: 80  LTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERKIKLLRSNFDQLIEIATKKK 139
           LTASLYVPG LD+ADKVLVDVGTGYFIEKTMA+GKDYCERKI LLRSN+DQL+E+ATKKK
Sbjct: 71  LTASLYVPGKLDDADKVLVDVGTGYFIEKTMAEGKDYCERKINLLRSNYDQLVEVATKKK 130

Query: 140 KVADEAGLILQAKLRQMGA 159
            +ADEAG+ILQAKL+Q+GA
Sbjct: 131 SIADEAGVILQAKLKQLGA 149

The following BLAST results are available for this feature:

BLAST of Cucsa.013970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PFD5_ARATH	2.7e-58	79.14	Probable prefoldin subunit 5 OS=Arabidopsis thaliana GN=At5g23290 PE=2 SV=1	[more]
PFD5_PONAB	1.9e-19	34.29	Prefoldin subunit 5 OS=Pongo abelii GN=PFDN5 PE=2 SV=1	[more]
PFD5_MOUSE	5.6e-19	33.57	Prefoldin subunit 5 OS=Mus musculus GN=Pfdn5 PE=1 SV=1	[more]
PFD5_HUMAN	5.6e-19	33.57	Prefoldin subunit 5 OS=Homo sapiens GN=PFDN5 PE=1 SV=2	[more]
PFD5_BOVIN	1.2e-18	33.33	Prefoldin subunit 5 OS=Bos taurus GN=PFDN5 PE=2 SV=1	[more]

BLAST of Cucsa.013970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMS5_CUCSA	6.1e-81	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G352600 PE=4 SV=1	[more]
A0A067L0B0_JATCU	2.0e-60	76.92	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05973 PE=4 SV=1	[more]
B9H5Q0_POPTR	3.5e-60	76.10	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s09240g PE=4 SV=1	[more]
A5BBT9_VITVI	6.0e-60	84.17	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0042g00150 PE=4 SV=...	[more]
A0A0B0N580_GOSAR	2.5e-58	77.42	Uncharacterized protein OS=Gossypium arboreum GN=F383_16051 PE=4 SV=1	[more]

BLAST of Cucsa.013970 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23290.1	1.5e-59	79.14	prefoldin 5	[more]

BLAST of Cucsa.013970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464306\|ref\|XP_004149870.1\|	8.8e-81	100.00	PREDICTED: probable prefoldin subunit 5 [Cucumis sativus]	[more]
gi\|802600244\|ref\|XP_012072842.1\|	2.9e-60	76.92	PREDICTED: probable prefoldin subunit 5 [Jatropha curcas]	[more]
gi\|1000962081\|ref\|XP_015575807.1\|	3.8e-60	77.56	PREDICTED: probable prefoldin subunit 5 isoform X3 [Ricinus communis]	[more]
gi\|224083880\|ref\|XP_002307156.1\|	5.0e-60	76.10	hypothetical protein POPTR_0005s09240g [Populus trichocarpa]	[more]
gi\|225462560\|ref\|XP_002267649.1\|	8.6e-60	84.17	PREDICTED: probable prefoldin subunit 5 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004127	Prefoldin_subunit_alpha
IPR009053	Prefoldin
IPR011599	PFD_alpha_archaea
IPR004127	Prefoldin_subunit_alpha
IPR009053	Prefoldin
IPR011599	PFD_alpha_archaea

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding
GO:0006457	protein folding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016272	prefoldin complex
GO:0016272	prefoldin complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0051082	unfolded protein binding
GO:0051082	unfolded protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0051082	unfolded protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.013970.2	Cucsa.013970.2	mRNA
Cucsa.013970.1	Cucsa.013970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004127	Prefoldin alpha-like	PFAM	PF02996	Prefoldin	coord: 39..133 score: 7.4
IPR009053	Prefoldin	GENE3D	G3DSA:1.10.287.370		coord: 25..134 score: 7.6
IPR009053	Prefoldin	unknown	SSF46579	Prefoldin	coord: 25..134 score: 8.63
IPR011599	Prefoldin alpha subunit, archaea-type	TIGRFAMs	TIGR00293	TIGR00293	coord: 26..132 score: 1.2
None	No IPR available	PANTHER	PTHR12674	PREFOLDIN SUBUNIT 5	coord: 12..133 score: 8.4
None	No IPR available	PANTHER	PTHR12674:SF2	PREFOLDIN SUBUNIT 5	coord: 12..133 score: 8.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.013970	Cla009085	Watermelon (97103) v1	cgywmB401
Cucsa.013970	Csa5G352600	Cucumber (Chinese Long) v2	cgycuB310
Cucsa.013970	MELO3C005064	Melon (DHL92) v3.5.1	cgymeB370
Cucsa.013970	ClCG01G008100	Watermelon (Charleston Gray)	cgywcgB378
Cucsa.013970	CSPI05G13840	Wild cucumber (PI 183967)	cgycpiB323
Cucsa.013970	CmaCh15G007900	Cucurbita maxima (Rimu)	cgycmaB0603
Cucsa.013970	CmaCh04G022440	Cucurbita maxima (Rimu)	cgycmaB0604
Cucsa.013970	CmoCh04G023450	Cucurbita moschata (Rifu)	cgycmoB0606
Cucsa.013970	Lsi09G008610	Bottle gourd (USVL1VR-Ls)	cgylsiB350
Cucsa.013970	Cp4.1LG13g05590	Cucurbita pepo (Zucchini)	cgycpeB0577
Cucsa.013970	Cp4.1LG01g19500	Cucurbita pepo (Zucchini)	cgycpeB0578
Cucsa.013970	MELO3C033736.2	Melon (DHL92) v3.6.1	cgymedB367
Cucsa.013970	CsaV3_5G020730	Cucumber (Chinese Long) v3	cgycucB328
Cucsa.013970	Carg17776	Silver-seed gourd	carcgyB0549
Cucsa.013970	Carg01415	Silver-seed gourd	carcgyB0950

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.013970	Cucurbita moschata (Rifu)	cgycmoB0605