Carg17776 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17776
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Prefoldin subunit 5
Location	Cucurbita_argyrosperma_scaffold_082 : 531671 .. 536305 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCAGATTGTAAAATTGAATCCTAACGCCAGGGTGAATCAATGGCTTCGAGAAAGGGCGGCAGCGCCGGCGAAGGGGTGCGATCGTTGGAGTTGGAGAAGATGAGTGTCGAGCAGCTCAAAGCCATCAAAGAACAGACTGACATGGAAGTCAATCTCCTTCACGATAGCCTCAACAACATTCGCACTGCCACTTCTCGCCTCGACAATGCCTCCGCTGCCCTTCACGATCTCTCGCTCCGTCCTCAAGGTTAGCTTCTCTCCATTTCTGGAAAATTAGTGTAAGTTCGTGTGTTTGGATTCTAATCGGTGGCTTCTCGTTTGTTGTTATGTGTTTTTGCTTCTTCGTTGATTGTTTGTTGGGCTTATTCGTTCAGATAGTGCCTTTTGTGTTTGCCTGATCGTGTATTGGTTAGTGAGTAGGGTTTTTTTTTTTTTTTTTTTTTCTTTCACAAATATCTCTTTTTAGGCAAGAAGATGCTGGTGCCTCTTACTGCGTCGCTTTACGTTCCTGGGACGCTGGATGACGCCGATAAGGTTTTGGTGGATGTCGGAACTGGATACTTCATTGAGGTCAGTTTAGACTTTGGGACCTTATTGCTTGGCTGCCATTCTTCAGTTCTTGATTCATTTTTTTTATTGCATCCATCGTTATTCATCTTTTATCGCTGAAATTTTTTCCAACATATAGTTAATGTACTTGTATTACAACTTGTTTTTAGTTGTGCCTTTTGTTGAGTGATACATGCTGATTTTCTTTGGCGACTTACTTGCAGATTTACCTTCTATGTAGGGTACTTATTTATATCAATTGTTCCTACCTATCTGAAATTGTTCTGGTTTATTACCACTAATTGTTGCTGATTGTTATCATCAGTTAGGATCTTATGATTCAGTGTGTAAGAATGATGATCCGGCTTGTCAACAATAATATAAGTTTGTCTTGTATTAAATATTAATGTTGGAAATGTGTTTTCATGACTGTTCTGAGTTGATTTGATGGTTGAATCAGAAAACAATGGCTGAAGGAAAAGATTACTGCGATCGAAAAATCAAATTGCTAAAGTCAAATTTTGACCAACTAATCGAGGTATTGTGACTACTTTCAAGTTGAATTTTTTTAACAATTTTTACAAGTTAGAATGCTAGCGAAAGAAGTGTTGATTTCTGAACAATATATTATAATTCCTTAATTGTTACTTCTGCATCTTTGTTTGTGAATGAAATATTATACTTGGTAAAGAATTAGGGGAAGTTCAAGAAAGGAAGCACTGCTAACTGAAATCGAAATGAGTTGGACGGCATCTACTCATCTTTAACAAAAATATATCTCTTTACATTCTTTTTTCTTGTGCTTGGGTCTAATTAAAGAGCTTATAACATATTGTTCTGGTCGATGCTGAATTGCCATCAAGCTGTTTGTAATGGGCATATAATCTTTATTCAAAAACAGAACTTTTTTTTTATTTTTTGATTGGAAGCATCGAACCATTTCATTGATGTATGAAAGAATACAAAAGTAAGACCTATCTATGATAGTTACAAGAAAGATCTTCAATGAGATAAGTGTGTTGCTAAGAGATAATCACAAAAAGTAGGAGGTAAAATACTCCCAAGATATGAAGTAGACTCGATGAGTGTATATTCTAATGCTTATTTTTAAAGACCCAAGCACTTCTGTTAAGTCATAAATTCCAAGAAAGGCGTAGATAAAATGGAGCAAAAACATTTTATTTTCCTTCGTAAATGGGTGTCCCTTGAGAGAAAAGTTGAGCAAGGAAAAGATATCACCAGGTCAAGTGATGTAACAACCAAATGCTTGTTATAAGAATGACCAAAAAGTTGAGGCAGAAGCACGGTTGCTGAACAAGTGAATCAGGGACTCATTATCCATGGTAGTATATGAGGCAGCAACTTGGAGTGATAGCCTGCCAAGGAGATTTTCACTGTAAATTGTCAAAGGTGTTGATACAAGCATGGCCAAGCTCTAAAATAAAAACTTGACTTTTCTGGGAGAATGTCCTTTCCATAACTGTTGATGAAATGCCAAATTGGTCAAATTACCAGTGGATGTGAGCTTTTGGGTTGGTGAACTGTTAGAAAAGAGCCCATCCTTTTCGAAACCTAAAGCCCATCTATCATCTTGATCTTTGAGCATGGAGGTCAATAAAGGCTGAGATAGGGAAGCCATTCTTCAGTTTAAACTTTATCAAGATTTCTTCTCAAGATTAGGTTCCAAGAACCAACCCTTTGGTTCCATAGATCAACAATAGTTACCTCTTCTCTAAGAGATAAATGATAAAGAGAGGTATACTTTCACTGTAAATTTTGTGCTCCCAGCCAAATATCTTCCAAAACAAAGCATTACCTCCCGTCCCAATTCTGACTTCTATGTGATTGTGTACTAGCTCTGCAAATTATGGATAGATTTTCATGGCCTCTTGGTTGTTTTCAAGAAACACTGCTTGACTCTAAGTTGTAATGGCTAGTACCATGTTTTGCAGCAATAATTTTTTTTGCCAATGATCATTTTTATCCTAATAAAACCTCTAATTCCATTTGGCCAAGAGGGAGATATTTCATTTCTGTATGTCAAAAATTCCCTATCCACCTTCAATAGGGGATTGTATAAGTGGCCGCTTTAGGAGATGGCTACCTTCTTTTGTCAATGTCTCCCCTCCACAGAAGGTCATGTACAACTTCTTAATATATTTTGTGACCTTTGATGGAGCAAGAAAAATGCGGGAATAATATATAGGCAAGTTTGAAAGCATAACTTCGATTGGAGTGTATCTACCTCCTTTTATGAGAGGGATAAGTGGAAGTGCGATGTGTCTGTTGGGTTATGCAAATGATTCTCAACTTTCTCAATGACAAGAGCCCAAAAGTTAATAGTGCGAGGATTACACCATTCGTGGGAGAAGGCATGATACGCATCCCATTTTCAACTAACCAAGGGAAAAAGATAGGCAGATACATAGTTTGGTCACCAATCTGTGAGCCATCCCCTTTACCCAATTCATTGGCACCTTTTGGAATAGAATTTTCCTGAGAGCATTCAACAATGCAAAGCGGTTGGTTCATTTCTATAGGTTCCCTGGGGACTAGAGCAGGATCATCAACAAGACAAGGTAAAGGGTTGAGGATGGGAGTTTGTTGTTCGAGGGTAAAAGCAAAAAGACTAGAAATAATAGTGAGGATTTTATGGGAGATTTATATAAGGATTGGTTCTATGAGGGGGAGACTTCAGTCGATTGAGAGCATGGTGAGGAAAGATAACCATTTGAATCTGATAAATATGGGTTCACAGTTTGTGGAAACTTTGGTTCTAGTGAGAAGTATGGTTTGTTTGTTGTTAATGGTACTGAATATTTTAGTTGAAGAGATGATTTTGGTGTAATTGAAAAGGAGGAAGTGATTTCGGTGTTCAATAAAGGTTGTGGGAGGTATGATGTGTCAGTAATCGAAGGCTCTGTGGTATGAAAGAGGGAGATGACGTAAGGTGCCCAGTTGGGTAGCCTTCTTTTGAGTTGCGCATGGGAATGGGCCATGCCCTGTTCTATAAAAGAACAAAGATTGATTATTAAGTTCTATGAATCCACTTGCAGTCCCACGCATGACCCGTTCCCCTTTTTCTCTTAGAGAAGTACTTGAGCTGCTTCCGCTCGAGTCCTCAACGTATAATGCAGTTCTCCTTGCCGACCAGTTAGAGTAACTAGTTTAAGTAGAAAGGAAAACTAAGCTTTTCAAAACAATTCAATCAAAGTAAATAGTTTAAACCTTTCCTTCTAAATTTTATTTCTGAGTCCATTTTATCTAAATTAAATTTGTTGAACTTTTTTAATTGTGTTCAATGTTAGTGTTGTGTTTATGCATATTGGGTTAGCTATTCAATATTTATACTTCATGGTTTATACATATACTTGGACATTTTAAAGCATTTTGTGTTCATTGTTTAGGATTTATAACATTATGGATATATTTTGGGTTGTTTTGAACCATATTTGGTGCAATATTTATGATTAATGCTTACATAGGGTTGTTTTGAACCATATTGCGTTCAGTGCTTATAATTTATGCATATATTTGAGCTTTTTAAAGCATATTGGGCTGCCCTCGGTTATAACAAGAAGTAAATGTATATTCCTTTGCTAAATTCATGCAGGTTGCTGCTAAAAAGAAGAATCTAGCAGATGAAGCTGGGGTGATCTTACAAGCAAAACTGAAGCAGATGGCTGCTACAACATAGGGAAATGTGTGACCATGTAATATGTTTGAAGGTAAACCTTAGGGGGAAGGTTCATGTCATATTTGAGGTGTTGGTAGCTGTAAACTTCTTCTAGCACTCACTGGATGATTAGAAATCCAATTTGTCGTGTGCGTGTGCGGTGACTAGCGCGGGGATGAAGATTTCGTAAGGCCACTAGAACCCATAGAAGGAAAAACTTAGCCACTCTGTTTTTCAACCCATGATATATAAATGTTATCTGATGATGAATTTGTTTTGGTAGAATTTTGCCCCATGAATTTCACAGGTAGAACAGTAGTTTTTTCCAGAGTGTATTAAGATTTATTCTCTTACTGAGATTTTGATTGGAGGAACTTGCATTTGCTCCATCTTTAATCCATGTCTTCGA

mRNA sequence

CGCAGATTGTAAAATTGAATCCTAACGCCAGGGTGAATCAATGGCTTCGAGAAAGGGCGGCAGCGCCGGCGAAGGGGTGCGATCGTTGGAGTTGGAGAAGATGAGTGTCGAGCAGCTCAAAGCCATCAAAGAACAGACTGACATGGAAGTCAATCTCCTTCACGATAGCCTCAACAACATTCGCACTGCCACTTCTCGCCTCGACAATGCCTCCGCTGCCCTTCACGATCTCTCGCTCCGTCCTCAAGGCAAGAAGATGCTGGTGCCTCTTACTGCGTCGCTTTACGTTCCTGGGACGCTGGATGACGCCGATAAGGTTTTGGTGGATGTCGGAACTGGATACTTCATTGAGAAAACAATGGCTGAAGGAAAAGATTACTGCGATCGAAAAATCAAATTGCTAAAGTCAAATTTTGACCAACTAATCGAGGTTGCTGCTAAAAAGAAGAATCTAGCAGATGAAGCTGGGGTGATCTTACAAGCAAAACTGAAGCAGATGGCTGCTACAACATAGGGAAATGTGTGACCATGTAATATGTTTGAAGGTAAACCTTAGGGGGAAGGTTCATGTCATATTTGAGGTGTTGGTAGCTGTAAACTTCTTCTAGCACTCACTGGATGATTAGAAATCCAATTTGTCGTGTGCGTGTGCGGTGACTAGCGCGGGGATGAAGATTTCGTAAGGCCACTAGAACCCATAGAAGGAAAAACTTAGCCACTCTGTTTTTCAACCCATGATATATAAATGTTATCTGATGATGAATTTGTTTTGGTAGAATTTTGCCCCATGAATTTCACAGGTAGAACAGTAGTTTTTTCCAGAGTGTATTAAGATTTATTCTCTTACTGAGATTTTGATTGGAGGAACTTGCATTTGCTCCATCTTTAATCCATGTCTTCGA

Coding sequence (CDS)

ATGGCTTCGAGAAAGGGCGGCAGCGCCGGCGAAGGGGTGCGATCGTTGGAGTTGGAGAAGATGAGTGTCGAGCAGCTCAAAGCCATCAAAGAACAGACTGACATGGAAGTCAATCTCCTTCACGATAGCCTCAACAACATTCGCACTGCCACTTCTCGCCTCGACAATGCCTCCGCTGCCCTTCACGATCTCTCGCTCCGTCCTCAAGGCAAGAAGATGCTGGTGCCTCTTACTGCGTCGCTTTACGTTCCTGGGACGCTGGATGACGCCGATAAGGTTTTGGTGGATGTCGGAACTGGATACTTCATTGAGAAAACAATGGCTGAAGGAAAAGATTACTGCGATCGAAAAATCAAATTGCTAAAGTCAAATTTTGACCAACTAATCGAGGTTGCTGCTAAAAAGAAGAATCTAGCAGATGAAGCTGGGGTGATCTTACAAGCAAAACTGAAGCAGATGGCTGCTACAACATAG

Protein sequence

MASRKGGSAGEGVRSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAALHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKLLKSNFDQLIEVAAKKKNLADEAGVILQAKLKQMAATT

Homology

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BLAST of Carg17776 vs. NCBI nr
Match: XP_022958568.1 (probable prefoldin subunit 5 [Cucurbita moschata] >XP_022990035.1 probable prefoldin subunit 5 [Cucurbita maxima])

HSP 1 Score: 296.2 bits (757), Expect = 6.6e-77
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAA 60
           MASRKGGSAGEGVRSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAA
Sbjct: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120

Query: 121 LKSNFDQLIEVAAKKKNLADEAGVILQAKLKQMAATT 158
           LKSNFDQLIEVAAKKKNLADEAGVILQAKLKQMAATT
Sbjct: 121 LKSNFDQLIEVAAKKKNLADEAGVILQAKLKQMAATT 157

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BLAST of Carg17776 vs. NCBI nr
Match: XP_023513364.1 (probable prefoldin subunit 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 294.7 bits (753), Expect = 1.9e-76
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAA 60
           MASRKGGS GEGVRSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAA
Sbjct: 1   MASRKGGSGGEGVRSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120

Query: 121 LKSNFDQLIEVAAKKKNLADEAGVILQAKLKQMAATT 158
           LKSNFDQLIEVAAKKKNLADEAGVILQAKLKQMAATT
Sbjct: 121 LKSNFDQLIEVAAKKKNLADEAGVILQAKLKQMAATT 157

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BLAST of Carg17776 vs. NCBI nr
Match: XP_023549859.1 (probable prefoldin subunit 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.5 bits (724), Expect = 4.4e-73
Identity = 149/157 (94.90%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAA 60
           MASRKGGSAGEGVRSLELEKMSVEQLKA KEQTDMEVNLLHDSLNNIRTATSRLD A+AA
Sbjct: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATAA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120

Query: 121 LKSNFDQLIEVAAKKKNLADEAGVILQAKLKQMAATT 158
           L+SNFDQLIE+A KKK +ADEAGVILQAKLKQMAATT
Sbjct: 121 LRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT 157

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BLAST of Carg17776 vs. NCBI nr
Match: XP_022938455.1 (probable prefoldin subunit 5 [Cucurbita moschata] >XP_022938456.1 probable prefoldin subunit 5 [Cucurbita moschata])

HSP 1 Score: 281.2 bits (718), Expect = 2.2e-72
Identity = 148/157 (94.27%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAA 60
           MASRKGGSAGEGVRSLELEKMSVEQLKA KEQ DMEVNLLHDSLNNIRTATSRLD A+AA
Sbjct: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQIDMEVNLLHDSLNNIRTATSRLDIATAA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120

Query: 121 LKSNFDQLIEVAAKKKNLADEAGVILQAKLKQMAATT 158
           L+SNFDQLIE+A KKK +ADEAGVILQAKLKQMAATT
Sbjct: 121 LRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT 157

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BLAST of Carg17776 vs. NCBI nr
Match: XP_022993145.1 (probable prefoldin subunit 5 [Cucurbita maxima] >XP_022993146.1 probable prefoldin subunit 5 [Cucurbita maxima])

HSP 1 Score: 276.9 bits (707), Expect = 4.1e-71
Identity = 146/157 (92.99%), Postives = 150/157 (95.54%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAA 60
           MASRKGGSAGEGVRSLELEKMSVEQLKA KEQTDMEVNLLHDSLNNIRTATSRLD A+A 
Sbjct: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAFKEQTDMEVNLLHDSLNNIRTATSRLDIATAV 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKV VDVGTGYFIEKTMAEGKDYCD KIKL
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVSVDVGTGYFIEKTMAEGKDYCDPKIKL 120

Query: 121 LKSNFDQLIEVAAKKKNLADEAGVILQAKLKQMAATT 158
           L+SNFDQLIE+A KKK +ADEAGVILQAKLKQMAATT
Sbjct: 121 LRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT 157

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BLAST of Carg17776 vs. TAIR10
Match: AT5G23290.1 (prefoldin 5)

HSP 1 Score: 226.5 bits (576), Expect = 1.2e-59
Identity = 114/141 (80.85%), Postives = 130/141 (92.20%), Query Frame = 0


Query: 17  ELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAALHDLSLRPQGKKMLVP 76
           E+EKM ++QLKA+KEQ D+EVNLL DSLNNIRTAT RLD A+AAL+DLSLRPQGKKMLVP
Sbjct: 9   EMEKMGIDQLKALKEQADLEVNLLQDSLNNIRTATVRLDAAAAALNDLSLRPQGKKMLVP 68

Query: 77  LTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKLLKSNFDQLIEVAAKKK 136
           LTASLYVPGTLD+ADKVLVD+GTGYFIEKTM +GKDYC RKI LLKSNFDQL EVAAKKK
Sbjct: 69  LTASLYVPGTLDEADKVLVDIGTGYFIEKTMDDGKDYCQRKINLLKSNFDQLFEVAAKKK 128

Query: 137 NLADEAGVILQAKLKQMAATT 158
           ++ADEAG++LQAK+KQ+ A T
Sbjct: 129 SVADEAGMVLQAKVKQLTAAT 149

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BLAST of Carg17776 vs. Swiss-Prot
Match: sp|P57742|PFD5_ARATH (Probable prefoldin subunit 5 OS=Arabidopsis thaliana OX=3702 GN=At5g23290 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.1e-58
Identity = 114/141 (80.85%), Postives = 130/141 (92.20%), Query Frame = 0


Query: 17  ELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAALHDLSLRPQGKKMLVP 76
           E+EKM ++QLKA+KEQ D+EVNLL DSLNNIRTAT RLD A+AAL+DLSLRPQGKKMLVP
Sbjct: 9   EMEKMGIDQLKALKEQADLEVNLLQDSLNNIRTATVRLDAAAAALNDLSLRPQGKKMLVP 68

Query: 77  LTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKLLKSNFDQLIEVAAKKK 136
           LTASLYVPGTLD+ADKVLVD+GTGYFIEKTM +GKDYC RKI LLKSNFDQL EVAAKKK
Sbjct: 69  LTASLYVPGTLDEADKVLVDIGTGYFIEKTMDDGKDYCQRKINLLKSNFDQLFEVAAKKK 128

Query: 137 NLADEAGVILQAKLKQMAATT 158
           ++ADEAG++LQAK+KQ+ A T
Sbjct: 129 SVADEAGMVLQAKVKQLTAAT 149

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BLAST of Carg17776 vs. Swiss-Prot
Match: sp|Q5RAY0|PFD5_PONAB (Prefoldin subunit 5 OS=Pongo abelii OX=9601 GN=PFDN5 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.5e-19
Identity = 48/142 (33.80%), Postives = 85/142 (59.86%), Query Frame = 0


Query: 14  RSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAALHDLSLRPQGKKM 73
           +S+ + ++++ QL+ +K Q D EV  L  S+  ++   ++   A   L+ L+   +GK++
Sbjct: 3   QSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKEL 62

Query: 74  LVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKLLKSNFDQLIEVAA 133
           LVPLT+S+YVPG L D + VL+DVGTGY++EKT  + KD+  RKI  L    +++     
Sbjct: 63  LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQ 122

Query: 134 KKKNLADEAGVILQAKLKQMAA 156
           +K  +      ++  K++Q+ A
Sbjct: 123 EKHAMKQAVMEMMSQKIRQLTA 144

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BLAST of Carg17776 vs. Swiss-Prot
Match: sp|Q99471|PFD5_HUMAN (Prefoldin subunit 5 OS=Homo sapiens OX=9606 GN=PFDN5 PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 3.3e-19
Identity = 48/142 (33.80%), Postives = 85/142 (59.86%), Query Frame = 0


Query: 14  RSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAALHDLSLRPQGKKM 73
           +S+ + ++++ QL+ +K Q D EV  L  S+  ++   ++   A   L+ L+   +GK++
Sbjct: 3   QSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKEL 62

Query: 74  LVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKLLKSNFDQLIEVAA 133
           LVPLT+S+YVPG L D + VL+DVGTGY++EKT  + KD+  RKI  L    +++     
Sbjct: 63  LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQ 122

Query: 134 KKKNLADEAGVILQAKLKQMAA 156
           +K  +      ++  K++Q+ A
Sbjct: 123 EKHAMKQAVMEMMSQKIQQLTA 144

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BLAST of Carg17776 vs. Swiss-Prot
Match: sp|Q9WU28|PFD5_MOUSE (Prefoldin subunit 5 OS=Mus musculus OX=10090 GN=Pfdn5 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.3e-19
Identity = 48/142 (33.80%), Postives = 85/142 (59.86%), Query Frame = 0


Query: 14  RSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAALHDLSLRPQGKKM 73
           +S+ + ++++ QL+ +K Q D EV  L  S+  ++   ++   A   L+ L+   +GK++
Sbjct: 3   QSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKEL 62

Query: 74  LVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKLLKSNFDQLIEVAA 133
           LVPLT+S+YVPG L D + VL+DVGTGY++EKT  + KD+  RKI  L    +++     
Sbjct: 63  LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQ 122

Query: 134 KKKNLADEAGVILQAKLKQMAA 156
           +K  +      ++  K++Q+ A
Sbjct: 123 EKHAMKQAVMEMMSQKIQQLTA 144

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BLAST of Carg17776 vs. Swiss-Prot
Match: sp|Q8HYI9|PFD5_BOVIN (Prefoldin subunit 5 OS=Bos taurus OX=9913 GN=PFDN5 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 9.5e-19
Identity = 47/140 (33.57%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 14  RSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAALHDLSLRPQGKKM 73
           +S+ + ++++ QL+ +K Q D EV  L  S+  ++   ++   A   L+ L    +GK++
Sbjct: 3   QSVNITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLKKNNEGKEL 62

Query: 74  LVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKLLKSNFDQLIEVAA 133
           LVPLT+S+YVPG L D + VL+DVGTGY++EKT  + KD+  RKI  L    +++     
Sbjct: 63  LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQ 122

Query: 134 KKKNLADEAGVILQAKLKQM 154
           +K  +      ++  K++Q+
Sbjct: 123 EKHAMKQAVMEMMSQKIQQL 142

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BLAST of Carg17776 vs. TrEMBL
Match: tr|A0A0A0KMS5|A0A0A0KMS5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G352600 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.2e-66
Identity = 140/159 (88.05%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MASRKGGSA-GEGVRS--LELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNA 60
           MASRKGGS+ GEGVRS  LELEKMSVEQL+A KEQTDMEVNLLHDSLNNIRTATSRLD A
Sbjct: 1   MASRKGGSSGGEGVRSLELELEKMSVEQLRAFKEQTDMEVNLLHDSLNNIRTATSRLDIA 60

Query: 61  SAALHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRK 120
           SAALHDLSLRPQGK+MLVPLTASLYVPGTLD+ADKVLVDVGTGYFIEKTMA+GKDYC+RK
Sbjct: 61  SAALHDLSLRPQGKRMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMADGKDYCERK 120

Query: 121 IKLLKSNFDQLIEVAAKKKNLADEAGVILQAKLKQMAAT 157
           IKLL+SNFDQLIE+A KKK +ADEAG+ILQAKL+QM AT
Sbjct: 121 IKLLRSNFDQLIEIATKKKKVADEAGLILQAKLRQMGAT 159

[Close]

BLAST of Carg17776 vs. TrEMBL
Match: tr|A0A1U8IVZ4|A0A1U8IVZ4_GOSHI (probable prefoldin subunit 5 OS=Gossypium hirsutum OX=3635 GN=LOC107900968 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.3e-62
Identity = 126/157 (80.25%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAA 60
           MAS +GG + + +RS ++EKMS++QLKA+KEQ D+EVNLL DSLNNIRTAT RL+NASAA
Sbjct: 1   MASSRGGGSQQVIRSGDMEKMSLDQLKAVKEQADIEVNLLQDSLNNIRTATGRLENASAA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVD+GTGYF+EKTMAEGKDYC+RKI L
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDIGTGYFVEKTMAEGKDYCERKINL 120

Query: 121 LKSNFDQLIEVAAKKKNLADEAGVILQAKLKQMAATT 158
           LKSNFDQLIEVA+KKK LADEAG+ILQAKLKQ + ++
Sbjct: 121 LKSNFDQLIEVASKKKTLADEAGLILQAKLKQSSPSS 157

[Close]

BLAST of Carg17776 vs. TrEMBL
Match: tr|A0A2P5W4L7|A0A2P5W4L7_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA34706 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.3e-62
Identity = 126/157 (80.25%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAA 60
           MAS +GG + + +RS ++EKMS++QLKA+KEQ D+EVNLL DSLNNIRTAT RL+NASAA
Sbjct: 1   MASSRGGGSQQVIRSGDMEKMSLDQLKAVKEQADIEVNLLQDSLNNIRTATGRLENASAA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVD+GTGYF+EKTMAEGKDYC+RKI L
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDIGTGYFVEKTMAEGKDYCERKINL 120

Query: 121 LKSNFDQLIEVAAKKKNLADEAGVILQAKLKQMAATT 158
           LKSNFDQLIEVA+KKK LADEAG+ILQAKLKQ + ++
Sbjct: 121 LKSNFDQLIEVASKKKTLADEAGLILQAKLKQSSPSS 157

[Close]

BLAST of Carg17776 vs. TrEMBL
Match: tr|A0A0D2M5D8|A0A0D2M5D8_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G015400 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.5e-61
Identity = 125/157 (79.62%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAA 60
           MAS +GG + + +R+ ++EKMS++QLKA+KEQ D+EVNLL DSLNNIR AT RL+NASAA
Sbjct: 1   MASSRGGGSQQVIRTGDMEKMSLDQLKAVKEQADIEVNLLQDSLNNIRAATGRLENASAA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYF+EKTMAEGKDYC+RKI L
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFVEKTMAEGKDYCERKINL 120

Query: 121 LKSNFDQLIEVAAKKKNLADEAGVILQAKLKQMAATT 158
           LKSNFDQLIEVA+KKK LADEAG+ILQAKLKQ + ++
Sbjct: 121 LKSNFDQLIEVASKKKTLADEAGLILQAKLKQSSPSS 157

[Close]

BLAST of Carg17776 vs. TrEMBL
Match: tr|A0A0B0N580|A0A0B0N580_GOSAR (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_16051 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.0e-61
Identity = 127/157 (80.89%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MASRKGGSAGEGVRSLELEKMSVEQLKAIKEQTDMEVNLLHDSLNNIRTATSRLDNASAA 60
           MAS +GGS  + +RS ++EKMS++QLKA+KEQ D+EVNLL DSLNNIRTAT RL+NASAA
Sbjct: 1   MASSRGGSQ-QVIRSGDMEKMSLDQLKAVKEQADIEVNLLQDSLNNIRTATGRLENASAA 60

Query: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDVGTGYFIEKTMAEGKDYCDRKIKL 120
           LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVD+GTGYF+EKTMAEGKDYC+RKI L
Sbjct: 61  LHDLSLRPQGKKMLVPLTASLYVPGTLDDADKVLVDIGTGYFVEKTMAEGKDYCERKINL 120

Query: 121 LKSNFDQLIEVAAKKKNLADEAGVILQAKLKQMAATT 158
           LKSNFDQLIEVA+KKK LADEAG+ILQAKLKQ + ++
Sbjct: 121 LKSNFDQLIEVASKKKTLADEAGLILQAKLKQSSPSS 156

The following BLAST results are available for this feature:

BLAST of Carg17776 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958568.1	6.6e-77	100.00	probable prefoldin subunit 5 [Cucurbita moschata] >XP_022990035.1 probable prefo...	[more]
XP_023513364.1	1.9e-76	99.36	probable prefoldin subunit 5 [Cucurbita pepo subsp. pepo]	[more]
XP_023549859.1	4.4e-73	94.90	probable prefoldin subunit 5 [Cucurbita pepo subsp. pepo]	[more]
XP_022938455.1	2.2e-72	94.27	probable prefoldin subunit 5 [Cucurbita moschata] >XP_022938456.1 probable prefo...	[more]
XP_022993145.1	4.1e-71	92.99	probable prefoldin subunit 5 [Cucurbita maxima] >XP_022993146.1 probable prefold...	[more]

BLAST of Carg17776 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23290.1	1.2e-59	80.85	prefoldin 5	[more]

BLAST of Carg17776 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P57742\|PFD5_ARATH	2.1e-58	80.85	Probable prefoldin subunit 5 OS=Arabidopsis thaliana OX=3702 GN=At5g23290 PE=2 S...	[more]
sp\|Q5RAY0\|PFD5_PONAB	2.5e-19	33.80	Prefoldin subunit 5 OS=Pongo abelii OX=9601 GN=PFDN5 PE=2 SV=1	[more]
sp\|Q99471\|PFD5_HUMAN	3.3e-19	33.80	Prefoldin subunit 5 OS=Homo sapiens OX=9606 GN=PFDN5 PE=1 SV=2	[more]
sp\|Q9WU28\|PFD5_MOUSE	3.3e-19	33.80	Prefoldin subunit 5 OS=Mus musculus OX=10090 GN=Pfdn5 PE=1 SV=1	[more]
sp\|Q8HYI9\|PFD5_BOVIN	9.5e-19	33.57	Prefoldin subunit 5 OS=Bos taurus OX=9913 GN=PFDN5 PE=2 SV=1	[more]

BLAST of Carg17776 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KMS5\|A0A0A0KMS5_CUCSA	1.2e-66	88.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G352600 PE=4 SV=1	[more]
tr\|A0A1U8IVZ4\|A0A1U8IVZ4_GOSHI	2.3e-62	80.25	probable prefoldin subunit 5 OS=Gossypium hirsutum OX=3635 GN=LOC107900968 PE=4 ...	[more]
tr\|A0A2P5W4L7\|A0A2P5W4L7_GOSBA	2.3e-62	80.25	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA34706 PE=4 SV...	[more]
tr\|A0A0D2M5D8\|A0A0D2M5D8_GOSRA	1.5e-61	79.62	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G015400 PE=4 ...	[more]
tr\|A0A0B0N580\|A0A0B0N580_GOSAR	2.0e-61	80.89	Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_16051 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0051082	unfolded protein binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016272	prefoldin complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

Vocabulary: **INTERPRO**
Term	Definition
IPR009053	Prefoldin
IPR004127	Prefoldin_subunit_alpha
IPR011599	PFD_alpha_archaea

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0051082	unfolded protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17776-RA	Carg17776-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011599	Prefoldin alpha subunit, archaea-type	TIGRFAM	TIGR00293	TIGR00293	coord: 23..151 e-value: 2.7E-35 score: 119.3
IPR004127	Prefoldin alpha-like	PFAM	PF02996	Prefoldin	coord: 36..151 e-value: 6.9E-30 score: 103.3
IPR009053	Prefoldin	GENE3D	G3DSA:1.10.287.370		coord: 16..156 e-value: 5.1E-34 score: 119.0
None	No IPR available	PANTHER	PTHR12674:SF2	PREFOLDIN SUBUNIT 5	coord: 15..155
None	No IPR available	PANTHER	PTHR12674	PREFOLDIN SUBUNIT 5	coord: 15..155
None	No IPR available	CDD	cd00584	Prefoldin_alpha	coord: 23..151 e-value: 3.56522E-30 score: 106.93
None	No IPR available	SUPERFAMILY	SSF46579	Prefoldin	coord: 22..154

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17776	Cla009085	Watermelon (97103) v1	carwmB0473
Carg17776	Csa5G352600	Cucumber (Chinese Long) v2	carcuB0512
Carg17776	MELO3C005064	Melon (DHL92) v3.5.1	carmeB0483
Carg17776	ClCG01G008100	Watermelon (Charleston Gray)	carwcgB0462
Carg17776	CSPI05G13840	Wild cucumber (PI 183967)	carcpiB0517
Carg17776	Cucsa.013970	Cucumber (Gy14) v1	carcgyB0549
Carg17776	CmaCh04G022440	Cucurbita maxima (Rimu)	carcmaB0665
Carg17776	CmaCh15G007900	Cucurbita maxima (Rimu)	carcmaB0664
Carg17776	CmoCh04G023450	Cucurbita moschata (Rifu)	carcmoB0648
Carg17776	Lsi09G008610	Bottle gourd (USVL1VR-Ls)	carlsiB433
Carg17776	Cp4.1LG13g05590	Cucurbita pepo (Zucchini)	carcpeB0669
Carg17776	Cp4.1LG01g19500	Cucurbita pepo (Zucchini)	carcpeB0670
Carg17776	CsGy5G013690	Cucumber (Gy14) v2	carcgybB0487
Carg17776	MELO3C033736.2	Melon (DHL92) v3.6.1	carmedB0487
Carg17776	CsaV3_5G020730	Cucumber (Chinese Long) v3	carcucB0516
Carg17776	Cla97C01G008450	Watermelon (97103) v2	carwmbB0501

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17776	Carg01415	Silver-seed gourd	carcarB469

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17776	Cucurbita maxima (Rimu)	carcmaB0666
Carg17776	Cucurbita moschata (Rifu)	carcmoB0647
Carg17776	Cucurbita pepo (Zucchini)	carcpeB0671
Carg17776	Bottle gourd (USVL1VR-Ls)	carlsiB434
Carg17776	Melon (DHL92) v3.5.1	carmeB0484
Carg17776	Melon (DHL92) v3.6.1	carmedB0488
Carg17776	Watermelon (Charleston Gray)	carwcgB0463
Carg17776	Watermelon (97103) v1	carwmB0474
Carg17776	Watermelon (97103) v2	carwmbB0502
Carg17776	Wax gourd	carwgoB0580