MELO3C026462 (gene) Melon (DHL92) v3.5.1

NameMELO3C026462
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCalcium-binding protein 5
Locationchr10 : 22250543 .. 22251242 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACTTTTTGTAGAAAGAAATACAAGGTTACTATAGGCTATAGCCATGTACATCTCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGGATGTTTATCAAGCACTATGAAAAAGATGGTGATGCTGTTCAAGTAAAAGGTTTCAATGATGTTCGAAGTTCAACGCAAATTGGTTATCAAGGAATTGTACCCAAAATCCTAAAGTCTAGTGACGATGTTGCACACAAGCTTAGTTTAGAAGCTCATATACAACCAACTCAGCAAACTGGAGGAAAGGGTAAAAAGTCCATCGCAAGGGCTCTTGACATAAAGTCATCTAATATGTCATTTAGTCGACAGCAAATAAAGGAAATTTTTCGATATCATGATAACAACAATGATGGGTTTCTTAACATAGTGGAACTCACTAAAGCTTTCGCATTTTTAGGCTCAATGTTTCCATTTTACAAAGCTTGCTACGGAATGGTATATGCGGATGCAAATGCAGATGGTCTTATCAGTGAAGCTGAGCTCGACAAACTCATTGATTATGCGACTAAAATTATCAAGAAGAAATAAACTTTTACCCAATTTTCCCATGTGTTTCAGATGTGATATATAGGTGAACTTCAAACCATTACTAAAATTAAATAAATATTTAAACACATATGTAAAATAATAGTATATTTGAAATTAAAATTACCGTTTCTTTTGAAC

mRNA sequence

AAAACTTTTTGTAGAAAGAAATACAAGGTTACTATAGGCTATAGCCATGTACATCTCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGGATGTTTATCAAGCACTATGAAAAAGATGGTGATGCTGTTCAAGTAAAAGGTTTCAATGATGTTCGAAGTTCAACGCAAATTGGTTATCAAGGAATTGTACCCAAAATCCTAAAGTCTAGTGACGATGTTGCACACAAGCTTAGTTTAGAAGCTCATATACAACCAACTCAGCAAACTGGAGGAAAGGGTAAAAAGTCCATCGCAAGGGCTCTTGACATAAAGTCATCTAATATGTCATTTAGTCGACAGCAAATAAAGGAAATTTTTCGATATCATGATAACAACAATGATGGGTTTCTTAACATAGTGGAACTCACTAAAGCTTTCGCATTTTTAGGCTCAATGTTTCCATTTTACAAAGCTTGCTACGGAATGGTATATGCGGATGCAAATGCAGATGGTCTTATCAGTGAAGCTGAGCTCGACAAACTCATTGATTATGCGACTAAAATTATCAAGAAGAAATAAACTTTTACCCAATTTTCCCATGTGTTTCAGATGTGATATATAGGTGAACTTCAAACCATTACTAAAATTAAATAAATATTTAAACACATATGTAAAATAATAGTATATTTGAAATTAAAATTACCGTTTCTTTTGAAC

Coding sequence (CDS)

ATGTACATCTCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGGATGTTTATCAAGCACTATGAAAAAGATGGTGATGCTGTTCAAGTAAAAGGTTTCAATGATGTTCGAAGTTCAACGCAAATTGGTTATCAAGGAATTGTACCCAAAATCCTAAAGTCTAGTGACGATGTTGCACACAAGCTTAGTTTAGAAGCTCATATACAACCAACTCAGCAAACTGGAGGAAAGGGTAAAAAGTCCATCGCAAGGGCTCTTGACATAAAGTCATCTAATATGTCATTTAGTCGACAGCAAATAAAGGAAATTTTTCGATATCATGATAACAACAATGATGGGTTTCTTAACATAGTGGAACTCACTAAAGCTTTCGCATTTTTAGGCTCAATGTTTCCATTTTACAAAGCTTGCTACGGAATGGTATATGCGGATGCAAATGCAGATGGTCTTATCAGTGAAGCTGAGCTCGACAAACTCATTGATTATGCGACTAAAATTATCAAGAAGAAATAA

Protein sequence

MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVAHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK*
BLAST of MELO3C026462 vs. TrEMBL
Match: A0A0A0KMQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067410 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.5e-72
Identity = 143/171 (83.63%), Postives = 153/171 (89.47%), Query Frame = 1

Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA 60
           MYISKLQASMAMYEA M IK YEK+GDAV+VK F+DVRSSTQIG +  V KILK SD VA
Sbjct: 1   MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVA 60

Query: 61  HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVE 120
           HKL  EAHIQPTQ+TGGKGKKSI R LD KSSNMS SR++IKEIF+YHDNNNDGFLN +E
Sbjct: 61  HKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRME 120

Query: 121 LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
           LTKAFAFLGSMFPFYKACYGMVYADAN DGLISEAELDKLIDYA+KIIKKK
Sbjct: 121 LTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

BLAST of MELO3C026462 vs. TrEMBL
Match: A0A0A0KLF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067670 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.1e-43
Identity = 99/173 (57.23%), Postives = 123/173 (71.10%), Query Frame = 1

Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFND-VRSSTQIGY-QGIVPKILKSSDD 60
           M+I +LQ S A YEA   +K YE++G+ V +  FND  R STQI   + +  K LK +DD
Sbjct: 28  MHIPQLQMSKAKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKLKPNDD 87

Query: 61  VAHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNI 120
           VAHKLS  A ++   Q  GK +  I R  D K+SNM FSR+QIKEIF+Y+D++ DGFLNI
Sbjct: 88  VAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNI 147

Query: 121 VELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
            E+TKAFA LGS+FPF KA +GMVYAD N DGLI E ELDKLI+YA K +KKK
Sbjct: 148 REVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 200

BLAST of MELO3C026462 vs. TrEMBL
Match: A0A0A0KIY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G068170 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.3e-40
Identity = 93/176 (52.84%), Postives = 126/176 (71.59%), Query Frame = 1

Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVR-SSTQIGY-QGIVPKIL--KSS 60
           MYIS LQ S A YEA   +K +E + + V +K FN +  +ST+I   Q +  +I+   S+
Sbjct: 1   MYISNLQVSKAKYEASKLMKKHENNDEGVPLKAFNGIPPASTKINNKQAMATEIILKPSN 60

Query: 61  DDVAHKLSLEAHIQPTQQTG-GKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGF 120
             VAH L+  A++ P++Q G GK + +    LDIK+SNM FSR+QIKEIF+YHD++NDGF
Sbjct: 61  HPVAHYLTSNAYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGF 120

Query: 121 LNIVELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
           LN+ E+TKAFAFLG++ P YKA +GMVYADAN DGLIS+ EL+KL+DYA K   K+
Sbjct: 121 LNLREVTKAFAFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176

BLAST of MELO3C026462 vs. TrEMBL
Match: A0A0A0LRC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359950 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.1e-31
Identity = 88/178 (49.44%), Postives = 112/178 (62.92%), Query Frame = 1

Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKG-----FNDVRSSTQIGYQGIVPK--IL 60
           M +S LQA  A  EA   IK Y+++GD V  K        D R STQ+     V    + 
Sbjct: 1   MSVSHLQA-WAKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVP 60

Query: 61  KSSDDVAHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNND 120
           K+++++A K+S    I P +Q   K + S       K SN+  SR+QIKEIF+YHD+N D
Sbjct: 61  KTNENLAQKVSSNTCITPKKQLLDKAQGSS------KQSNVPLSREQIKEIFKYHDSNKD 120

Query: 121 GFLNIVELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
           GFL+I ELTKAF+ +GS+ PF KA Y M YAD + DGL+SEAELDKLIDYA KIIKKK
Sbjct: 121 GFLSIRELTKAFSSMGSIVPFCKARYAMAYADVDEDGLVSEAELDKLIDYAHKIIKKK 171

BLAST of MELO3C026462 vs. TrEMBL
Match: A0A0A0LKX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359940 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.5e-19
Identity = 49/80 (61.25%), Postives = 59/80 (73.75%), Query Frame = 1

Query: 92  SNMSFSRQQIKEIFRYHDNNNDGFLNIVELTKAFAFLGSMFPFYKACYGMVYADANADGL 151
           S  +FSR+++KEIFR HD + DG+L+I EL KA  FLG   PFYKA YGM Y D N DGL
Sbjct: 7   SKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGL 66

Query: 152 ISEAELDKLIDYATKIIKKK 172
           ISE ELDKLIDYA +  K++
Sbjct: 67  ISEDELDKLIDYAERFQKRR 86

BLAST of MELO3C026462 vs. NCBI nr
Match: gi|700194510|gb|KGN49687.1| (hypothetical protein Csa_5G067410 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 2.1e-72
Identity = 143/171 (83.63%), Postives = 153/171 (89.47%), Query Frame = 1

Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA 60
           MYISKLQASMAMYEA M IK YEK+GDAV+VK F+DVRSSTQIG +  V KILK SD VA
Sbjct: 1   MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVA 60

Query: 61  HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVE 120
           HKL  EAHIQPTQ+TGGKGKKSI R LD KSSNMS SR++IKEIF+YHDNNNDGFLN +E
Sbjct: 61  HKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRME 120

Query: 121 LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
           LTKAFAFLGSMFPFYKACYGMVYADAN DGLISEAELDKLIDYA+KIIKKK
Sbjct: 121 LTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

BLAST of MELO3C026462 vs. NCBI nr
Match: gi|700194512|gb|KGN49689.1| (hypothetical protein Csa_5G067670 [Cucumis sativus])

HSP 1 Score: 184.5 bits (467), Expect = 1.6e-43
Identity = 99/173 (57.23%), Postives = 123/173 (71.10%), Query Frame = 1

Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFND-VRSSTQIGY-QGIVPKILKSSDD 60
           M+I +LQ S A YEA   +K YE++G+ V +  FND  R STQI   + +  K LK +DD
Sbjct: 28  MHIPQLQMSKAKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKLKPNDD 87

Query: 61  VAHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNI 120
           VAHKLS  A ++   Q  GK +  I R  D K+SNM FSR+QIKEIF+Y+D++ DGFLNI
Sbjct: 88  VAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNI 147

Query: 121 VELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
            E+TKAFA LGS+FPF KA +GMVYAD N DGLI E ELDKLI+YA K +KKK
Sbjct: 148 REVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 200

BLAST of MELO3C026462 vs. NCBI nr
Match: gi|700194513|gb|KGN49690.1| (hypothetical protein Csa_5G068170 [Cucumis sativus])

HSP 1 Score: 171.8 bits (434), Expect = 1.1e-39
Identity = 93/176 (52.84%), Postives = 126/176 (71.59%), Query Frame = 1

Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVR-SSTQIGY-QGIVPKIL--KSS 60
           MYIS LQ S A YEA   +K +E + + V +K FN +  +ST+I   Q +  +I+   S+
Sbjct: 1   MYISNLQVSKAKYEASKLMKKHENNDEGVPLKAFNGIPPASTKINNKQAMATEIILKPSN 60

Query: 61  DDVAHKLSLEAHIQPTQQTG-GKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGF 120
             VAH L+  A++ P++Q G GK + +    LDIK+SNM FSR+QIKEIF+YHD++NDGF
Sbjct: 61  HPVAHYLTSNAYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGF 120

Query: 121 LNIVELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
           LN+ E+TKAFAFLG++ P YKA +GMVYADAN DGLIS+ EL+KL+DYA K   K+
Sbjct: 121 LNLREVTKAFAFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176

BLAST of MELO3C026462 vs. NCBI nr
Match: gi|449470190|ref|XP_004152801.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 3.1e-31
Identity = 88/178 (49.44%), Postives = 112/178 (62.92%), Query Frame = 1

Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKG-----FNDVRSSTQIGYQGIVPK--IL 60
           M +S LQA  A  EA   IK Y+++GD V  K        D R STQ+     V    + 
Sbjct: 1   MSVSHLQA-WAKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVP 60

Query: 61  KSSDDVAHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNND 120
           K+++++A K+S    I P +Q   K + S       K SN+  SR+QIKEIF+YHD+N D
Sbjct: 61  KTNENLAQKVSSNTCITPKKQLLDKAQGSS------KQSNVPLSREQIKEIFKYHDSNKD 120

Query: 121 GFLNIVELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
           GFL+I ELTKAF+ +GS+ PF KA Y M YAD + DGL+SEAELDKLIDYA KIIKKK
Sbjct: 121 GFLSIRELTKAFSSMGSIVPFCKARYAMAYADVDEDGLVSEAELDKLIDYAHKIIKKK 171

BLAST of MELO3C026462 vs. NCBI nr
Match: gi|659089539|ref|XP_008445564.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis melo])

HSP 1 Score: 134.4 bits (337), Expect = 1.9e-28
Identity = 83/177 (46.89%), Postives = 110/177 (62.15%), Query Frame = 1

Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKG-----FNDVR-SSTQIGYQGIVPKILK 60
           M +S LQA  A  EA   IK Y+++GD V  K       +D R  + +      +PK   
Sbjct: 1   MSVSHLQA-WAKIEASELIKKYDRNGDGVLTKEELQSFLHDARLKNIRFVSSSTIPK--- 60

Query: 61  SSDDVAHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDG 120
           +++++  K+S    I+P +Q   K + S+      + SN+  SR+QIKEIF+YHD+N DG
Sbjct: 61  TNENLDQKVSSNTRIKPKKQLLDKAQDSL------RQSNVPLSREQIKEIFKYHDSNKDG 120

Query: 121 FLNIVELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
           FL+I ELTKAF  LGS+ PF KA + M YAD + DGLISEAEL KLIDYA KIIKKK
Sbjct: 121 FLSIRELTKAFGSLGSIVPFAKARHAMAYADVDEDGLISEAELHKLIDYAEKIIKKK 167

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KMQ1_CUCSA1.5e-7283.63Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067410 PE=4 SV=1[more]
A0A0A0KLF3_CUCSA1.1e-4357.23Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067670 PE=4 SV=1[more]
A0A0A0KIY4_CUCSA7.3e-4052.84Uncharacterized protein OS=Cucumis sativus GN=Csa_5G068170 PE=4 SV=1[more]
A0A0A0LRC8_CUCSA2.1e-3149.44Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359950 PE=4 SV=1[more]
A0A0A0LKX1_CUCSA5.5e-1961.25Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359940 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700194510|gb|KGN49687.1|2.1e-7283.63hypothetical protein Csa_5G067410 [Cucumis sativus][more]
gi|700194512|gb|KGN49689.1|1.6e-4357.23hypothetical protein Csa_5G067670 [Cucumis sativus][more]
gi|700194513|gb|KGN49690.1|1.1e-3952.84hypothetical protein Csa_5G068170 [Cucumis sativus][more]
gi|449470190|ref|XP_004152801.1|3.1e-3149.44PREDICTED: probable calcium-binding protein CML11 [Cucumis sativus][more]
gi|659089539|ref|XP_008445564.1|1.9e-2846.89PREDICTED: probable calcium-binding protein CML11 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU50758melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026462T1MELO3C026462T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU50758MU50758transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13405EF-hand_6coord: 101..128
score: 1.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 145..167
score: 5.782coord: 96..131
score: 12
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 92..161
score: 1.
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 93..159
score: 1.03
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 109..121
score: -coord: 145..157
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 88..164
score: 2.1
NoneNo IPR availablePANTHERPTHR10891:SF592CALCIUM-BINDING PROTEIN CML38-RELATEDcoord: 88..164
score: 2.1

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C026462Wild cucumber (PI 183967)cpimeB378