MELO3C026421.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C026421.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	30S ribosomal protein S17-like
Location	chr10 : 21908241 .. 21917680 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGTTGATTAATCCTTACAATGCCCTTTTTGTGCAATTTTTTTTTCTTTTATTTTTCCGAGAGTTCTTCTCCTTGTGCTTAAACCCTATTTCACGTTAAGCCACCCCGCCCTCCCATTACATGGTACTCCGCCCCACCGCACGCCGTTCCTATCCAGATAGTTCCTGAATCTTTGTAATTTGTAGCAGCTTCAAGCTTAAAAGGGTTTAGGGTTTTCAATCGCTTGCCCAAGATGAAGCAAGTAGTGGGTATGGTGGTTTCAAACAAAATGCAGAAATCAGTTGTCGTTGCAGTGGACAGATTGTTTTATCACAAACTCTATAATCGCTACGTTAAACGCACTTCCAAGTTCATGGCTCATGACGAGAACAACCAGTGCAATATTGGTGACAGGGTGAGAATTTAATTCCATATTTACTTCCCCAATTAATTTGTTTTTACTTCATTTCAATTCGATCGATCAAGTTGTGGACTCCATGTATAGTTTCAGTTACAATATCGTGCAAATTTGTTCGACATCACGGTAGTACTGGATGAAATGGATAGTGTAAAGCATGTTGTCGTGGACCTTCTTTGTGTTTGAACAGTTTATTTGTTAAATTTTCATATGCATTATGTTAATTTATATAATTCTTGTTTCTTTTTCATTTCTCTTGAACATGTACTTTGGGTTTGTTAGTATTTAACGTTTCTAGTTAATCCACTGATGCAACAAATTGAATTTTATAAACTCAGGTTAAATTAGATCCTTCTAGGCCATTGAGCAAGCGTAAACATTGGGTGGTTGCTGAAATTTTGAGGAAAGCACGAATTTACGAGCCACCATCACAAGATAACCAAACTGTTTCAGACAAAAGCAATGTTTCAGCTCCTTCAACCACTTAAGGTTTGATTGACACACTTGTTATTTTCTTTGTAGAAAGGCAAACTTGAATCTTATTGAGTTCTGGATTGTTCTGGGCGATCATAATCACTTGAATCCTTGATGACTATTTGCGGCAACTCTTTGTTTCCATTTAGAGTATGTGGCTGTTGCCGTTGATTGTTATTTATTAGAAATTACTAGAATACATCTTTTTATTGTTCTGTGAACAATATGTCATAACTTGGCATTTTACCATCTTTCTTGATGGCATGGTAGGTTCATGAGCAGGAATTTTTTTTTTTTTAATGAAATCAAACAGCTTTCATTGAGATCAAAATGAAAGAATACAAGGGCATACAAAAAAACCAGCCCACCAAATCACCCCACTTACGATAAGGGGGACTGTTAGATACCTAGATTAGTATAGGGTAGGGTATAAGGGTAATTAGATATTTTGAACATTTACATGGTTAATAGGAAGTTGGTGAGAGAAGAAGGGGGATCATTTTGTGAGTGGTTTCTGCAAGTTTCCTTGAGAGAGAGGAAAGGTAGAGAGGGTAGTTACTTTCATATTTGTTCTTAATTTACTGCAATTTCATTCCAGAATTGAGTTCATCAATTCTTTCTTGTGATCGTTGAAGTTCATATCAATATAATACGAGCACACTCCTTGGTGTTCTATCAGGGACCAACTAAGTAAAATACTGTCTATGGAGTAGTTACAAAAAGTTCTTTGAAATCGAAGCCCAAAAAGACACATGAAATCTAATGAAGGACCAAATCACACTAAGATCCCTCTCTTTCCCTCGGAACACCCTATCGTTCTGCTCACCCCAAATGTCCTAAATAACCCTACACACCCTGGAAAGCCATAAAAAGCCCCTTTATCTTTGAAAAGCGGATGGAGGAGGAACTCCTCTATCGTCGCTCTGAGGCTACGTAAACTAGCAAAGCTAACACCGAACTCCTGAAGGAAGGAGCTCCACACAACCCTCGCAAATTTGCAATCCTAAAAAAGATGATCAAGATCATTCTCCGCCTTCTGACACAACATGCAACAAAAAAGCCCGACAAGCGAAGTTCTTCTCCTAACAAGCCTATCAACAATGTTAACCTGATCAAGCAAGACTTGCCAGATAAAGAACATAACTTTCTTAGGCACATTAGTACTCCACACCACATCAAAAACCAACTCTTTAGTGGGAGCGGGATCCAACAACAGACTAAACATGGAGAAACCCCAACTAGGATTAGGATTCCAAACATGAATATCCCTTCTCCCCTCTCTAAAAGAGCATCCCTTAAGGAAGGACAGAAGAGAAGCCACCTTTGTCTTCTCCCTATTGGTCAAATTACGACAAAACCCGAAAGAGAAAGACACAAAATTCTCAAATCTCACCAAAAGATCAGAGATGGTGCAATTTTTGGAAGATGATAAATGATACAGATATGGAAATATGTTTCTCCTCCACCCACGGATCCTCTCGAAAATGTATCCTTACTATCCCCCACAATATAGCCAGAAAACTGAGAAAAATAAAGGAGCTTGAAAGAGATGTCCTTCCAAGGATTCCAAAAAGTTCCTTTAACCCCTAAAGCCATCCATTCAAAAAGATGGGGGCCATGAATGCGCACAACAATCTTATGCCAAAGAGAATTAGATTCCAGATACAAGCACGAAAACCACTTTGCCAACAAAGCGCCCTACCAACTCCCAATTAACCAAATGGGAGCCACCCCACCCCCTCCCACAGGAAATCTCTCATGTACTTTTCAATACTCTTACACACCAAGTAGGGGCCCTAAACAATGAAAGATAATATACTGGAATACCACTTTGCACATACTTAATTGAAGTTAATCTGCCAGCTTTCAAATCTTTTAGGGTTACGTCGATGAGAATGGAATACTTAACACTTCTAACACACCCCCACATCCACACCCGCCATTTATAACCACAGCCTTTCCTCTTTACAATCCTATCTAGAAAATTCTTGTCCACATGGTCGTACGCTTTCCCAAAGTCAAAGTTTAACAAAAACCCCTCCAAATTTTTCGATCTAGACTCCTCAATAGCTTCATTAGCTAACGAAGCTTGGTCCAAAATCTGCCTACCAGTCAAAAAAGCCCCTTGCGAATTAGAGATTGTCGACAGGAGTATAGTCCTTAGGCGATTAGCAAGTACTTTAGCCAAAATGTTGAAGATGCTAGTAATGAGATTAATAGGCCGAAACTCTTTCACCCTGTTCGCATTTTCCTTTTTGGGAATCAAACAAACTAAGGTTTCAGTCATCGAGCTATTCAGAATACCTCTTTCAAAGAATTCCTTAAAAATCCCCTCCAAGTCTCCTTTGATAAGCTCCCAATTCTCCTTGAAGAACGCCATAGAGAACACATCCGCACCAGGAGACTTGTTACCATCACAGCTGAAGACAACCTTTTTAATATCGTCAACGAAAACCAGGCCACTAACTCCTCATTCTCCCTTGGCGATATAGGACTCCATTCAATGCCCTCCACAAATGTCTTAACTGACACCGTGGGACTATAGAGATTAGAGAAAGAATTTAGGATCTCGTCCTCGGTTTCCTTCCTATCTCTTTCATGAGCAGTTCTTGCTAATAAAATGATTGACATGGTGCGCATCATCCTAAGAAGATTTAGTAATAAAACTAAAATGAAGCATTTTAGTGGTCTTGAGACATATAATGTCTTTGTGAGCAACTAAGATACCCTTCCCATTTGAATCCCTTTGTTTGAAATTTGATGATTATGTTGTCTTATTTTTGCTGTATGTTAATGACTTGGTGTTCGTAGTGAACCATGAAACACATCTTGCCTTTTGAAAATGCAGTTCAGAAAGTTTTGCTAGATAAGAGCCTGTATTTTCTTCGCTTCATTTTTCCTTTTAGGTGTTTATTTCATTTTCCTTTAAATGTTTCGTCTATCTTTTCATTTTGAGGAGTTTCAACTTACCCAAAAAGGGACATAATGATAGTATTTCATGGAGGTTCTTTCACAATGATTGATTTATGTTCATTCTGCCCTCCAATTGTTTGCAAACGCATTGCATTTATTCATGCCCTTTTATCTATATAATTCTGGGTTTTGATGAGCCAGGTGGCTGTCTTAAAATACTCATTGGTGATTGTTCGAAATTTTTATTTGAAGTTTGATCCATAGGATACTTTGTCTCCAGAAAGTCCTATCTTGTAGTTGTTCCTAGCGATTTTGGTTGGATTAAGATTAAAAACATGTTTCCACGTATCATTTTAGAATTACTAACCTTCAAAACCTGCATTGATTGGCTAATGGTCAACAAGGCTGAAAGTACATACCTAAGATTTAAAATTGTACAAGTGTTTGCTTGGCAACCAAATGCAGTTCTAAGAGGAAACCTTCAACATCACAGAGGATTATTTGGAGGTTTTAAGGGTGTGATCGTATCAGTGCTGGATCTTGTGGAAAAATCAAAGTTAAAAGAGGAAATATAGAGGTTCTCTTACAGTGAAAATAGGGTTTTCAAGGGTGCTGGCCCAATAACAATGTCCTTGGTTCCTTATAGAGCTACATGGCTATTATGGAGCCATTTCAGTGAATTTTTGTTGACAGATGCACCTTATTGTTCATTGAGTTCAATATGCTACGGAAACCTTTTATTTTCATTTACAACGCAGAGAAGAAAGTTTCTCGGTCGTCCAAAGTTCCCTGAAAAAATAAGAAATGGAAAATGGTTGATTAAACTTCTTTTAGGAACATTACAATTTGAGTATTATGATGGGTTAACTTTGAACCTGATGTGTTGAGTGGAAACTTGAAGCTGAAACCAAACAAGAAAAAGAGGTTTTGGTCGTGAACGGTTTATAGGAAATGATTCAAGAAGTAATAAGGAGATGGTTGGGCCTAAAGGGTTTTGTTTGAACCCTGATTTTGTTGAATGTCAACACCGACATAATTTTTGCTTGGCTCCAATTTTTAAATCACAAATGATAGCCAGCGCTCTGTGAGTGAACAATCTTTTCCCTTAATGATGACAAAAAGACTCTTTTGTGCTTTTTTGGGTAACAATATTGTTGAATGAAGATTTGAACTGGAATACACATTTGAGGGATGGAGCTCAATGCAGTTTGGGTAATATAATCCTTACGTAAGAGTCATCCTACTCAACTTTCAGGCATTATGGGTTACAAACTGTTTGAAATTTAATCTCGTTATTGTGGTTGTACGAGAAATACAATTTAGAGAAGTTGATGGAAGATTTGTTGAATCTTCATGGTGTTCCAAGAACATTGCAACAAATGACTTCTTCCGGTGCCATTGCTATTGGGGCATTTTGGTTTTATTCAGCAACTATTGTTTATGTTTTGGTAGGTTAGCGTGATCGTAACTGGGTCTTGGGAGTAATCTCTTTGTGGTAAGATCATCAAGAGAACAATTTTGAATGGTCATAGATTTATTTCTAGCATGAAGAATTATCTCTTTTTGACCCTCCCAAAAAGTCCTTTTACATGGTCTAACATAAGAGAAATCCCATCTTTCTTGTTTTGTTAAATTTTCTTTCCTATGCTATGTTGTAAAAAATCTTAAATTCATTCAAGTGAGATCAAAGGAATAGGAGCACCACCTGACTATCATCTAATTTTCTTTGAAGTTAGCAATTTGGACAGTTTTACTCCTTTTTATTTTGATGATTCCGGTAGATTCATGTTAGGTAACCAATATTTCTGCTCTCAGAAAAAATACCCGAGAAGAGATAAACAGGGGAAAACACACCGTGATCTTGATATATTCCAATATGGAAATACTATCTCAAGCCAAAGTCTCAAGAACAAGAACACTAAAAGACCAGAGAACAAAGAAAATATAAGGGCTGATATGAGAGCACCTCCTCTCCAAGAAAGCTTACTCCAAATCACCAATTCCTCTCCACAAAACCCTACATAAACCACCAACGTAAACTCTCCTCCTACATTCTTCATGATCCCTTGACAGGAAGCTGCAGAACCCATACACTCCCTTTCCACTAACGGTTTGCTGCACCTCCAGTTACCTTCTTGCCCCTCCTTTCAAATGTATGAATTATCAGGAGTCTTATGTTTCATTATGAGTTCCTTCGTGTCAAAATGAAAGTAGCTCTACAACGCTAATAAAAATGAATTGCTGGAGATTGTCCTCAAAGGGTTTATGTTATGGAAAACAAAGTGCCAGCCAAAGTGGCAAAGAAGTGTGAGGATGAGGAAAGTGATAGAACACTAAGAAGTTGTGTTTGTATTATATTGATATGAACTTCAACAATTACAATATAGAATTGATGATCTCAATTCTGGAAATAAAATGCAGAAATTAAGAACAATGCAGAAAAACAAAGAACAAAGATGAATGAAACTTCCCTCTCTGCCTTTCCTTTCTCTCAAGTGCAGAAATCACTCACAAAATGATCGTCCCTTCTCTCTAAATTCCCTCTCATTTAACCACTTCTTCCTTGTAACTAACTATGGACCCCACCATTGTGGTCTTTCTCCTAATGCTCACCCCCTCATTTGCACGTGTGTTTTCCTTCTTCTTCCTCCTACTATATTGTAATACAATTGGAGGTCTATCATTATGCTCCTCCAAACTCACCTTGTCCTCAAGGTGGAAATTAGGAAATTGTTGTTTAAAATCATTACAGTTCTCCCACGTAGCTTCATGTGGTGGTAGGCCTTTCCAACTGATTAGCATTTCCCATTCCCCGAGTTGAAGAATTCTTGTTGTACCTGAATACTTCTTTTGGTGTTGCCATCCATTCATGGTTTTCATTCACGAAAGGACTCAATTGGTTCACCTCAGTATGATCTCCTAGCATCTTTTTGAGTTGGGATACATGGAATACTGGGTGAATGGATGCTGTGGTCGGTAATTCCAACTTATAAGCAACAGGACCTATTCTTTCGATCACCCTGTAAGGTTCGAAAAATTTTGGTGACAATTTTTTGTTTCTTCTCTTTCTAAATGAGACCCCACGATAGGGTCTATTTTTTAGAAATACAAGCTCCCCACTTGGAATTCAACATGTTTTCTCTTCATGTCTGCATACTTCATCTTTTCTTGGGCAATTTTAAGGTGTTCCTTCAATGTTTCCAAAATCACATCTCTTTCCTTTAACTGTCGATCAAGTATCGAATTGGGTGTCTCCATATCACCATAATATATTAATGGTGGTGGTAACTGTCCATAAACGGCTTGGAATGGGGTTATCCCAATTGATCTTTGGTATGTGGTGTTATACCGGTATTCGGCCTAGGGGAGCCAATTTACTCATTCCTTCGGCTTCTGCCCACAAAAACACCTCAGATATGCTTCCACTCCTTGGTTAACCACTTCTGTTTGGCCGTCAGACTGTGGGTGGTATGTCGAGCTTCTATTCAGCCCATTCCAGATAGACAAAACATCTCCTTCCAAATGTTACTAAGGAACACTTTATCACGATCTAAAACTATAGACTTTGGGTATCCATGTAATCTTACTATCTCTTTTACATAAATTTCAGCGACTGACTTAGCAGTATATGGATGTTTCAAAGCTAAAAAGTGGGTATACTTACTCATTCTACCACTACCAAAAATTAAGAACAATGCAGAAAAACAAAGAACAAAGATGAATGAAACTTTCCTCTCCATCTTTCCTTTCTCTTAAGGAAACATGCAGAAATCACACACAAAATGATCCTCCCTTCTCCCTTCCGAATTCCCTCTCATTTAATGACTTCTTCCTTGTAACTAACTGTGGACCTCACCATTGTGGTCCTCTCTCCTAATGCTCACCCCCTCGTTGGCACATGTGTTTTCCTTCTTCTTCCTCCTACTATATTGTAATACAATTGGTGGTCTATCAGAAAGCTGCTAAATTCTGTCACAACAACTTGGTTACAAATAAGAATGGTTTCCTTTTGGAAATTCATTTGGAGTATGGAAGTTGTTTGGCCATTGTTTAGCAAGTAGCAGGGAAATCAATTTTTCTGTCTACAAAATGGAATTTCTTTGTTTTATTACCAAAGGGTCATAATTTAGTTCAATTTTTTCACCATTGGATGTTGATTGGCTGTAGCGTGTCATATTGATATTTTGGGAACATTTGAACAGCTAACATGCTTTGAACAAGGAATGGAGCTTGGTGGAACTTCAATGAGCTTCATCTTATATTGCCGTCATTGAGTTTGGTTTGAAGAAGGGAGAGAACTTCAATGAGCTTCATCCCACCAATGAGTTTGTTTTGAATAAGAGATGGAACTTTCCGAATGTGGATTTTTTTGTTTTGTTCAACAACTTATGGATAATGGTATTGGTTTTTTGATACAGAGACAAGCTTAGGTATTATAAACTCTAACATCAATCTATCTTCTTTTTCTCTTTAATTCCTAAAGATTTGATGCCAAATGTTTGAATTGAAACCAATTTTGGGCCCCTTTTGCAGAAATTTTGGCTAGTAGGCCTTTTTTGGTTGGTAATTTCCGGCTACTTTTGATGTCAGTCTGAGCTGAAGCAGCTCTGATCGTAAAAAGATCCCCCCAAGCATACCTTGGCTTCAAGTGTTGCTTCTTGTTTAAGAAAAATGTGGAATGGAAGATTCAGACCATATATTCTTGACTTACCGTGACATTTTATCTTTATCTGGACTGAAGGAGGTTTTGTAACACTTTCAACTGCAAGATCATGTGAAAGATTCGTAATGAAAATGTCCATGTAGAAATAGCCATCAATTGGTTGAGGCATTATAATCTTAACCAGCAGGTGATAGCCTGATAGGTTCGAATTCTACCCAATATATTATTAAACAGTTTCTTTTTTCTTTGTTTTAGTACAAAAGGGGTGGAAGTACGTGGGTTTGAACTTCTGACCTTGAGAGGAGTGCATATTTAATTATGTGGCTTGTTTTTGTGATTTTCATGCTAGCTACCCTTTTGGGAGTTAGGTGGGAGAATCTTCAAAGATGAGTGATCGGGATTTAGGTGAAATGAATAGGAAGAAATTTTTTTTGAAGATGATTGTATTTCATTATTGTTTCTCTTTTTGTGCCTCGCCAGTTCTTTCTATAATTATTCTTTCTTTTGTATTTATGGTTCAACCTAATAAGACATGCATGTATATAATTTCTTTGGCAACTCAGTTACACTCCCTCTCCCTTTCTATTGGTTTCTTTCATCAATGTAAAAACTGCAAATCTGTCTCGCATTTATATAAAGACATTTCCAATAATATCTGTTTGCCTAACCATTTAACAGAAGAAACTACTGCAAACCACAAGACCAAATTCGATCTCGCATTGCATTGGAAAACTGAAGAACGGAAACTCTGGACAATGAACTACTTCTGTAAGCAGTATGTTTCTCAGATTAAAGATTTGTAGTTACATTACCATTTCGTTTCTTACTGTTGTGTGAACCTTCTTCTTTCCTACGAGGCATTTTATCTCCACAAGTGTTGTTGTGATGTTAAAAATGCATAATAAACATATTCAGAAAGGTTCTATCCATCAGTTCATATCTCTGGAAGTCAGAAGAGATCTAACTTTATTCTAAACTAAATCTTCTTAATA

mRNA sequence

TCAGTTGATTAATCCTTACAATGCCCTTTTTGTGCAATTTTTTTTTCTTTTATTTTTCCGAGAGTTCTTCTCCTTGTGCTTAAACCCTATTTCACGTTAAGCCACCCCGCCCTCCCATTACATGGTACTCCGCCCCACCGCACGCCGTTCCTATCCAGATAGTTCCTGAATCTTTGTAATTTGTAGCAGCTTCAAGCTTAAAAGGGTTTAGGGTTTTCAATCGCTTGCCCAAGATGAAGCAAGTAGTGGGTATGGTGGTTTCAAACAAAATGCAGAAATCAGTTGTCGTTGCAGTGGACAGATTGTTTTATCACAAACTCTATAATCGCTACGTTAAACGCACTTCCAAGTTCATGGCTCATGACGAGAACAACCAGTGCAATATTGGTGACAGGGTTAAATTAGATCCTTCTAGGCCATTGAGCAAGCGTAAACATTGGGTGGTTGCTGAAATTTTGAGGAAAGCACGAATTTACGAGCCACCATCACAAGATAACCAAACTGTTTCAGACAAAAGCAATGTTTCAGCTCCTTCAACCACTTAAGAAGAAACTACTGCAAACCACAAGACCAAATTCGATCTCGCATTGCATTGGAAAACTGAAGAACGGAAACTCTGGACAATGAACTACTTCTGTAAGCAGTATGTTTCTCAGATTAAAGATTTGTAGTTACATTACCATTTCGTTTCTTACTGTTGTGTGAACCTTCTTCTTTCCTACGAGGCATTTTATCTCCACAAGTGTTGTTGTGATGTTAAAAATGCATAATAAACATATTCAGAAAGGTTCTATCCATCAGTTCATATCTCTGGAAGTCAGAAGAGATCTAACTTTATTCTAAACTAAATCTTCTTAATA

Coding sequence (CDS)

ATGAAGCAAGTAGTGGGTATGGTGGTTTCAAACAAAATGCAGAAATCAGTTGTCGTTGCAGTGGACAGATTGTTTTATCACAAACTCTATAATCGCTACGTTAAACGCACTTCCAAGTTCATGGCTCATGACGAGAACAACCAGTGCAATATTGGTGACAGGGTTAAATTAGATCCTTCTAGGCCATTGAGCAAGCGTAAACATTGGGTGGTTGCTGAAATTTTGAGGAAAGCACGAATTTACGAGCCACCATCACAAGATAACCAAACTGTTTCAGACAAAAGCAATGTTTCAGCTCCTTCAACCACTTAA

Protein sequence

MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPSRPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT

Homology

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BLAST of MELO3C026421.2 vs. NCBI nr
Match: XP_016903240.1 (PREDICTED: 30S ribosomal protein S17-like [Cucumis melo])

HSP 1 Score: 204.1 bits (518), Expect = 2.2e-49
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 104
           RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT
Sbjct: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 103

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BLAST of MELO3C026421.2 vs. NCBI nr
Match: XP_004137152.1 (PREDICTED: 30S ribosomal protein S17, chloroplastic [Cucumis sativus] >XP_011653397.1 PREDICTED: 30S ribosomal protein S17, chloroplastic [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 1.2e-47
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 104
           RPLSK KHWVVAEILRKARIYEPPSQD Q+VSDKSNVSAPSTT
Sbjct: 61  RPLSKHKHWVVAEILRKARIYEPPSQDKQSVSDKSNVSAPSTT 103

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BLAST of MELO3C026421.2 vs. NCBI nr
Match: XP_022989005.1 (uncharacterized protein LOC111486195 [Cucurbita maxima] >XP_022989013.1 uncharacterized protein LOC111486195 [Cucurbita maxima])

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-45
Identity = 97/103 (94.17%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 104
           RPLSK K WVVAEILRKARIYEPPSQ+NQ VSDK  VSAPSTT
Sbjct: 61  RPLSKHKRWVVAEILRKARIYEPPSQENQVVSDKGKVSAPSTT 103

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BLAST of MELO3C026421.2 vs. NCBI nr
Match: XP_022943007.1 (uncharacterized protein LOC111447872 [Cucurbita moschata] >XP_022943008.1 uncharacterized protein LOC111447872 [Cucurbita moschata] >XP_023549349.1 uncharacterized protein LOC111807726 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549358.1 uncharacterized protein LOC111807726 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549366.1 uncharacterized protein LOC111807726 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 190.7 bits (483), Expect = 2.5e-45
Identity = 96/103 (93.20%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 104
           RPLSK K WVVAEILRKARIY+PPSQ+NQ VSDK  VSAPSTT
Sbjct: 61  RPLSKHKRWVVAEILRKARIYQPPSQENQVVSDKGKVSAPSTT 103

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BLAST of MELO3C026421.2 vs. NCBI nr
Match: XP_022155383.1 (uncharacterized protein LOC111022528 [Momordica charantia])

HSP 1 Score: 189.1 bits (479), Expect = 7.4e-45
Identity = 95/103 (92.23%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 104
           RPLSK KHW+VAEILRKARIY PPSQD+QT SDKS  +APSTT
Sbjct: 61  RPLSKHKHWMVAEILRKARIYVPPSQDSQTSSDKSKAAAPSTT 103

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BLAST of MELO3C026421.2 vs. TAIR10
Match: AT1G49400.1 (Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 144.1 bits (362), Expect = 5.0e-35
Identity = 68/83 (81.93%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 1  MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
          MK V+G VVSNKMQKSVVVAVDRLF++K+YNRYVKRTSKFMAHD+ + CNIGDRVKLDPS
Sbjct: 1  MKPVIGTVVSNKMQKSVVVAVDRLFHNKIYNRYVKRTSKFMAHDDKDACNIGDRVKLDPS 60

Query: 61 RPLSKRKHWVVAEILRKARIYEP 84
          RPLSK KHW+VAEI++KARIY P
Sbjct: 61 RPLSKNKHWIVAEIIKKARIYSP 83

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BLAST of MELO3C026421.2 vs. TAIR10
Match: AT3G18880.1 (Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 140.2 bits (352), Expect = 7.2e-34
Identity = 66/83 (79.52%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 1  MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
          MK V+G VVSNKMQ SVVVAVDRLF++ +YNRYVKRTSKFMAHDE + CNIGDRVKLDPS
Sbjct: 1  MKAVIGTVVSNKMQMSVVVAVDRLFHNNIYNRYVKRTSKFMAHDEKDSCNIGDRVKLDPS 60

Query: 61 RPLSKRKHWVVAEILRKARIYEP 84
          RPLSK KHW+V+EI++KARIY P
Sbjct: 61 RPLSKHKHWIVSEIIKKARIYSP 83

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BLAST of MELO3C026421.2 vs. TAIR10
Match: AT1G79850.1 (ribosomal protein S17)

HSP 1 Score: 61.2 bits (147), Expect = 4.2e-10
Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 0


Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MK + G VV     K+V V V RL  H  Y R V+   K+ AHD +NQ  +GD V+L+ S
Sbjct: 50  MKTMQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKS 109

Query: 61  RPLSKRKHWVVAEILRKA 79
           RP+SK K +V   ++ +A
Sbjct: 110 RPISKTKSFVALPVIARA 127

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BLAST of MELO3C026421.2 vs. TAIR10
Match: AT4G30800.1 (Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 42.7 bits (99), Expect = 1.6e-04
Identity = 27/71 (38.03%), Postives = 38/71 (53.52%), Query Frame = 0


Query: 6   GMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAH-DENNQCNIGDRVKLDPSRPLS 65
           G   S KMQ++++V  D L + K Y RY KR S   AH     +   GDRV +   RPLS
Sbjct: 74  GTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKEGDRVTIGQCRPLS 133

Query: 66  KRKHWVVAEIL 76
           K   + V +++
Sbjct: 134 KTVRFNVLKVI 144

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BLAST of MELO3C026421.2 vs. Swiss-Prot
Match: sp|A7HM43|RS17_FERNB (30S ribosomal protein S17 OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) OX=381764 GN=rpsQ PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.3e-20
Identity = 46/83 (55.42%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 2  KQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPSR 61
          K++VG+VVS+KM K+V V V+RL  H  + +YVKRT KF AHDENN C +GD V+++ SR
Sbjct: 4  KRLVGVVVSDKMDKTVTVKVERLVKHAKFGKYVKRTKKFYAHDENNACRVGDVVEIEESR 63

Query: 62 PLSKRKHWVVAEILRKARIYEPP 85
          PLSK K WVV  IL ++++ E P
Sbjct: 64 PLSKLKRWVVVNILERSKLSETP 86

[Close]

BLAST of MELO3C026421.2 vs. Swiss-Prot
Match: sp|B1I1J7|RS17_DESAP (30S ribosomal protein S17 OS=Desulforudis audaxviator (strain MP104C) OX=477974 GN=rpsQ PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 5.6e-20
Identity = 47/75 (62.67%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 6  GMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPSRPLSK 65
          G VVS+KM K+VVVAVD L  H LY R V+RT KFMAHDE+NQC IGD+VK+  +RPLS+
Sbjct: 11 GRVVSDKMDKTVVVAVDTLVKHPLYGRTVRRTRKFMAHDEDNQCRIGDKVKIAETRPLSR 70

Query: 66 RKHWVVAEILRKARI 81
           K W VAE+L +++I
Sbjct: 71 HKRWRVAEVLERSQI 85

[Close]

BLAST of MELO3C026421.2 vs. Swiss-Prot
Match: sp|Q6LVA7|RS17_PHOPR (30S ribosomal protein S17 OS=Photobacterium profundum (strain SS9) OX=298386 GN=rpsQ PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 8.1e-19
Identity = 40/76 (52.63%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 5  VGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPSRPLS 64
          +G V+S+KM KS+VVA++R+  H +Y +Y+KRT+K  AHDENN+CN+GD V++   RPLS
Sbjct: 9  LGRVISSKMDKSIVVAIERMVKHPMYGKYIKRTTKLHAHDENNECNLGDTVEVRECRPLS 68

Query: 65 KRKHWVVAEILRKARI 81
          K K W +  I+ KAR+
Sbjct: 69 KTKSWTLVRIVEKARV 84

[Close]

BLAST of MELO3C026421.2 vs. Swiss-Prot
Match: sp|Q1LTC9|RS17_BAUCH (30S ribosomal protein S17 OS=Baumannia cicadellinicola subsp. Homalodisca coagulata OX=374463 GN=rpsQ PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-18
Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 6  GMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPSRPLSK 65
          G VVSNKM KS+VVA++R+  H +Y +Y+KRT+K  AHDENN CNIGD +++   RP+SK
Sbjct: 15 GRVVSNKMDKSIVVAIERIIKHPIYGKYIKRTTKIHAHDENNACNIGDLIEIKECRPISK 74

Query: 66 RKHWVVAEILRKA 79
           K W++  I+ KA
Sbjct: 75 TKSWILIRIIEKA 87

[Close]

BLAST of MELO3C026421.2 vs. Swiss-Prot
Match: sp|Q8R7W3|RS17_CALS4 (30S ribosomal protein S17 OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=rpsQ PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.4e-18
Identity = 43/74 (58.11%), Postives = 56/74 (75.68%), Query Frame = 0


Query: 5  VGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPSRPLS 64
          +G VVSNKMQK++VVAV+  F H LY + VKRT K+  HDENN CN+GD VK+  +RPLS
Sbjct: 10 IGTVVSNKMQKTIVVAVEDKFRHPLYGKIVKRTKKYKVHDENNICNVGDVVKIMETRPLS 69

Query: 65 KRKHWVVAEILRKA 79
          K K W + E+++KA
Sbjct: 70 KEKRWRLVEVIKKA 83

[Close]

BLAST of MELO3C026421.2 vs. TrEMBL
Match: tr|A0A1S4E5I9|A0A1S4E5I9_CUCME (30S ribosomal protein S17-like OS=Cucumis melo OX=3656 GN=LOC107992092 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-49
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 104
           RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT
Sbjct: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 103

[Close]

BLAST of MELO3C026421.2 vs. TrEMBL
Match: tr|A0A2P5DDS6|A0A2P5DDS6_PARAD (Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_072430 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38
Identity = 86/102 (84.31%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRY+KRTSKFMAHDE N CNIGDRV+LDPS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYIKRTSKFMAHDEQNHCNIGDRVRLDPS 60

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPST 103
           RPLSKRKHWVVAEIL+KARIY PPS       D SNVSAP +
Sbjct: 61  RPLSKRKHWVVAEILKKARIYVPPS-----ALDSSNVSAPQS 97

[Close]

BLAST of MELO3C026421.2 vs. TrEMBL
Match: tr|A0A061E6G1|A0A061E6G1_THECC (Nucleic acid-binding, OB-fold-like protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_009914 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.6e-38
Identity = 83/103 (80.58%), Postives = 92/103 (89.32%), Query Frame = 0


Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MK VVG+VVSNKMQKSVVVAVDRLF+HKLYNRYVKRTSKFMAHDEN+QCNIGDRVKLDPS
Sbjct: 1   MKSVVGVVVSNKMQKSVVVAVDRLFHHKLYNRYVKRTSKFMAHDENDQCNIGDRVKLDPS 60

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 104
           RPLSKRKHWVVAE+L+KARIY PPS D    ++  N + PS+T
Sbjct: 61  RPLSKRKHWVVAEVLKKARIYVPPSMDKAANANFKNEAPPSST 103

[Close]

BLAST of MELO3C026421.2 vs. TrEMBL
Match: tr|A0A2P5FPC0|A0A2P5FPC0_9ROSA (Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_047830 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.8e-38
Identity = 88/107 (82.24%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRY+KRTSKFMAHDE NQCNIGDRV+LDPS
Sbjct: 193 MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYIKRTSKFMAHDEQNQCNIGDRVRLDPS 252

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNV----SAPSTT 104
           RPLSKRKHWVVAEIL+KARIY PPS       D SNV    SAPS++
Sbjct: 253 RPLSKRKHWVVAEILKKARIYVPPS-----ALDSSNVNAQQSAPSSS 294

[Close]

BLAST of MELO3C026421.2 vs. TrEMBL
Match: tr|A0A2H5NAW6|A0A2H5NAW6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_028360 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.9e-37
Identity = 80/96 (83.33%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
          MK VVG+VVSNKMQKSVVVAVDRLF+HK+YNRYVKRTSKFMAHDENN+CNIGDRV+LDPS
Sbjct: 1  MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPS 60

Query: 61 RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSN 97
          RPLSK KHWVVAEIL+KARIY PPS DN   +  SN
Sbjct: 61 RPLSKHKHWVVAEILKKARIYVPPSADNAAAAAVSN 96

The following BLAST results are available for this feature:

BLAST of MELO3C026421.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903240.1	2.2e-49	100.00	PREDICTED: 30S ribosomal protein S17-like [Cucumis melo]	[more]
XP_004137152.1	1.2e-47	97.09	PREDICTED: 30S ribosomal protein S17, chloroplastic [Cucumis sativus] >XP_011653...	[more]
XP_022989005.1	1.1e-45	94.17	uncharacterized protein LOC111486195 [Cucurbita maxima] >XP_022989013.1 uncharac...	[more]
XP_022943007.1	2.5e-45	93.20	uncharacterized protein LOC111447872 [Cucurbita moschata] >XP_022943008.1 unchar...	[more]
XP_022155383.1	7.4e-45	92.23	uncharacterized protein LOC111022528 [Momordica charantia]	[more]

BLAST of MELO3C026421.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G49400.1	5.0e-35	81.93	Nucleic acid-binding, OB-fold-like protein	[more]
AT3G18880.1	7.2e-34	79.52	Nucleic acid-binding, OB-fold-like protein	[more]
AT1G79850.1	4.2e-10	42.31	ribosomal protein S17	[more]
AT4G30800.1	1.6e-04	38.03	Nucleic acid-binding, OB-fold-like protein	[more]

BLAST of MELO3C026421.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A7HM43\|RS17_FERNB	4.3e-20	55.42	30S ribosomal protein S17 OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5...	[more]
sp\|B1I1J7\|RS17_DESAP	5.6e-20	62.67	30S ribosomal protein S17 OS=Desulforudis audaxviator (strain MP104C) OX=477974 ...	[more]
sp\|Q6LVA7\|RS17_PHOPR	8.1e-19	52.63	30S ribosomal protein S17 OS=Photobacterium profundum (strain SS9) OX=298386 GN=...	[more]
sp\|Q1LTC9\|RS17_BAUCH	1.1e-18	54.79	30S ribosomal protein S17 OS=Baumannia cicadellinicola subsp. Homalodisca coagul...	[more]
sp\|Q8R7W3\|RS17_CALS4	1.4e-18	58.11	30S ribosomal protein S17 OS=Caldanaerobacter subterraneus subsp. tengcongensis ...	[more]

BLAST of MELO3C026421.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E5I9\|A0A1S4E5I9_CUCME	1.5e-49	100.00	30S ribosomal protein S17-like OS=Cucumis melo OX=3656 GN=LOC107992092 PE=3 SV=1	[more]
tr\|A0A2P5DDS6\|A0A2P5DDS6_PARAD	1.2e-38	84.31	Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_072430 PE=3 SV=...	[more]
tr\|A0A061E6G1\|A0A061E6G1_THECC	2.6e-38	80.58	Nucleic acid-binding, OB-fold-like protein isoform 1 OS=Theobroma cacao OX=3641 ...	[more]
tr\|A0A2P5FPC0\|A0A2P5FPC0_9ROSA	5.8e-38	82.24	Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_047830 PE=3 SV=1	[more]
tr\|A0A2H5NAW6\|A0A2H5NAW6_CITUN	2.9e-37	83.33	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_028360 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR012340	NA-bd_OB-fold
IPR019984	Ribosomal_S17
IPR000266	Ribosomal_S17/S11

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026421.2.1	MELO3C026421.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000266	Ribosomal protein S17/S11	PRINTS	PR00973	RIBOSOMALS17	coord: 52..62 score: 49.27 coord: 62..69 score: 61.5 coord: 20..43 score: 37.58
IPR000266	Ribosomal protein S17/S11	PFAM	PF00366	Ribosomal_S17	coord: 6..73 e-value: 4.1E-32 score: 110.0
IPR000266	Ribosomal protein S17/S11	PANTHER	PTHR10744	40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER	coord: 2..83
IPR000266	Ribosomal protein S17/S11	PRODOM	PD001295		coord: 4..71 e-value: 2.0E-31 score: 332.0
None	No IPR available	GENE3D	G3DSA:2.40.50.140		coord: 1..99 e-value: 7.8E-36 score: 123.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..103
None	No IPR available	PANTHER	PTHR10744:SF1	37S RIBOSOMAL PROTEIN S17, MITOCHONDRIAL	coord: 2..83
IPR019984	30S ribosomal protein S17	TIGRFAM	TIGR03635	TIGR03635	coord: 2..71 e-value: 3.9E-31 score: 104.9
IPR019984	30S ribosomal protein S17	HAMAP	MF_01345_B	Ribosomal_S17_B	coord: 1..76 score: 22.205
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	SSF50249	Nucleic acid-binding proteins	coord: 2..87

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C026421.2	CmaCh04G010080	Cucurbita maxima (Rimu)	cmamedB729
MELO3C026421.2	CmoCh04G010870	Cucurbita moschata (Rifu)	cmomedB726
MELO3C026421.2	Lsi04G011240	Bottle gourd (USVL1VR-Ls)	lsimedB301
MELO3C026421.2	Cp4.1LG01g07530	Cucurbita pepo (Zucchini)	cpemedB428
MELO3C026421.2	Cla011721	Watermelon (97103) v1	medwmB059
MELO3C026421.2	ClCG07G006010	Watermelon (Charleston Gray)	medwcgB068
MELO3C026421.2	Cla97C07G134100	Watermelon (97103) v2	medwmbB065
MELO3C026421.2	Bhi07G000306	Wax gourd	medwgoB075
MELO3C026421.2	Carg00120	Silver-seed gourd	carmedB0667

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C026421.2	Cucumber (Gy14) v2	cgybmedB314
MELO3C026421.2	Cucumber (Gy14) v1	cgymedB270
MELO3C026421.2	Cucurbita maxima (Rimu)	cmamedB732
MELO3C026421.2	Cucurbita moschata (Rifu)	cmomedB724
MELO3C026421.2	Cucurbita pepo (Zucchini)	cpemedB427
MELO3C026421.2	Wild cucumber (PI 183967)	cpimedB355
MELO3C026421.2	Cucumber (Chinese Long) v2	cumedB352
MELO3C026421.2	Watermelon (97103) v1	medwmB055
MELO3C026421.2	Silver-seed gourd	carmedB0186
MELO3C026421.2	Cucumber (Chinese Long) v3	cucmedB365