MELO3C025547.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025547.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	At2g42760
Location	chr12 : 13708306 .. 13709080 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGTGAATGAAGAAAGGCTAAATTAGCCAAACAAACACAACACAGATCTCTAGTTGATGGACTTTGAGCAAGTTCTCAATCTCTTCGATTCTTTTTGGTTCAAGCGTGAAATCTTCAACAAACACCCCTTTCCAAGCAAAGAAATCACGGGAGCCGAGTCGAGGAGGAGGAAACCTAGAGGAAGAAGAATTAGGGGGTCGGAAAATAGGAGCCAATTGGAGCTGGAATTTGAGGAGCTAAAAGGGTTTATGGATTTGGGATTTGTTTTCTCGGAGGAGGATAAAGGTTCGATCTTGGCCTCCATAGTTCCTGGATTGAATTGGCTAGGAAAAAGGGAAGAAGAAGAAGAAGGAGAAGAAAAGTTGTGTGCTGGCGAAATTTCTAGGCCTTATCTTTCAGAAGCTTGGGAGACTATGGAGGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAAAGGTGGAACTGAAGAAGCCATTGAAGATGAAATGGAAGTTTCCTTCTAATGAAATTCATATGAAAGTTAATCTCAAATGGTGGGCTCGTGCTGTTGCTTCAACTGTTAGATCATGACTCTACTCTTAATTCTTTTTTTCTTACTTCTATTAAGTATATCATCGATTCAAGCTCCAATTTTTAGGGAGTAAGATCATGTAATTACACAGTTTCACCTTTTGCCTATAATTTATTCTTCTATCTGTTCTTCGTGTATTTCCTTTTTCGATTTTTTTTTAATTAAATTGTAATTAAGTTATTGGATTTTCTTAA

mRNA sequence

GTTTGTGAATGAAGAAAGGCTAAATTAGCCAAACAAACACAACACAGATCTCTAGTTGATGGACTTTGAGCAAGTTCTCAATCTCTTCGATTCTTTTTGGTTCAAGCGTGAAATCTTCAACAAACACCCCTTTCCAAGCAAAGAAATCACGGGAGCCGAGTCGAGGAGGAGGAAACCTAGAGGAAGAAGAATTAGGGGGTCGGAAAATAGGAGCCAATTGGAGCTGGAATTTGAGGAGCTAAAAGGGTTTATGGATTTGGGATTTGTTTTCTCGGAGGAGGATAAAGGTTCGATCTTGGCCTCCATAGTTCCTGGATTGAATTGGCTAGGAAAAAGGGAAGAAGAAGAAGAAGGAGAAGAAAAGTTGTGTGCTGGCGAAATTTCTAGGCCTTATCTTTCAGAAGCTTGGGAGACTATGGAGGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAAAGGTGGAACTGAAGAAGCCATTGAAGATGAAATGGAAGTTTCCTTCTAATGAAATTCATATGAAAGTTAATCTCAAATGGTGGGCTCGTGCTGTTGCTTCAACTGTTAGATCATGACTCTACTCTTAATTCTTTTTTTCTTACTTCTATTAAGTATATCATCGATTCAAGCTCCAATTTTTAGGGAGTAAGATCATGTAATTACACAGTTTCACCTTTTGCCTATAATTTATTCTTCTATCTGTTCTTCGTGTATTTCCTTTTTCGATTTTTTTTTAATTAAATTGTAATTAAGTTATTGGATTTTCTTAA

Coding sequence (CDS)

ATGGACTTTGAGCAAGTTCTCAATCTCTTCGATTCTTTTTGGTTCAAGCGTGAAATCTTCAACAAACACCCCTTTCCAAGCAAAGAAATCACGGGAGCCGAGTCGAGGAGGAGGAAACCTAGAGGAAGAAGAATTAGGGGGTCGGAAAATAGGAGCCAATTGGAGCTGGAATTTGAGGAGCTAAAAGGGTTTATGGATTTGGGATTTGTTTTCTCGGAGGAGGATAAAGGTTCGATCTTGGCCTCCATAGTTCCTGGATTGAATTGGCTAGGAAAAAGGGAAGAAGAAGAAGAAGGAGAAGAAAAGTTGTGTGCTGGCGAAATTTCTAGGCCTTATCTTTCAGAAGCTTGGGAGACTATGGAGGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAAAGGTGGAACTGAAGAAGCCATTGAAGATGAAATGGAAGTTTCCTTCTAATGAAATTCATATGAAAGTTAATCTCAAATGGTGGGCTCGTGCTGTTGCTTCAACTGTTAGATCATGA

Protein sequence

MDFEQVLNLFDSFWFKREIFNKHPFPSKEITGAESRRRKPRGRRIRGSENRSQLELEFEELKGFMDLGFVFSEEDKGSILASIVPGLNWLGKREEEEEGEEKLCAGEISRPYLSEAWETMEEEEEEEEEEEEEEEKVELKKPLKMKWKFPSNEIHMKVNLKWWARAVASTVRS

Homology

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BLAST of MELO3C025547.2 vs. NCBI nr
Match: XP_011648467.1 (PREDICTED: cyclin-dependent kinase 11B-like [Cucumis sativus] >KGN65040.1 hypothetical protein Csa_1G181530 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 1.1e-61
Identity = 142/171 (83.04%), Postives = 148/171 (86.55%), Query Frame = 0


Query: 2   DFEQVLNLFDSFWFKREIFNKHPFPSKEITGAESRRRKPRGRRIRGSENRSQLELEFEEL 61
           DFEQVLNLFDSFWFKR+IFNKHPFPSKEI GAES RRKPRGR+ RG+ENRSQLELEFEEL
Sbjct: 3   DFEQVLNLFDSFWFKRKIFNKHPFPSKEIAGAES-RRKPRGRKTRGAENRSQLELEFEEL 62

Query: 62  KGFMDLGFVFSEEDKGSILASIVPGLNWLGKREEEEEGEEKLCAGEISRPYLSEAWETME 121
           KGFMDLGFVFSEEDKGSILASIVPGLNWLGKR        KLC GEISRPYLSEAWETM 
Sbjct: 63  KGFMDLGFVFSEEDKGSILASIVPGLNWLGKRXXXXXXXXKLC-GEISRPYLSEAWETM- 122

Query: 122 XXXXXXXXXXXXXXXXXXXXXXKMKWKFPSNEIHMKVNLKWWARAVASTVR 173
              XXXXXXXXXXXXXX      MKW+FPSNEIHMKVNLKWWA AVAST++
Sbjct: 123 ---XXXXXXXXXXXXXXLKKPLMMKWRFPSNEIHMKVNLKWWAHAVASTIK 167

[Close]

BLAST of MELO3C025547.2 vs. NCBI nr
Match: KGN65608.1 (hypothetical protein Csa_1G470240 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 2.5e-37
Identity = 111/260 (42.69%), Postives = 122/260 (46.92%), Query Frame = 0


Query: 1   MDFEQVLNLFDSFWFKREIFNKHPFP---------------------------------- 60
           MDF+ +LNLFDSFWF+R++ N HPFP                                  
Sbjct: 1   MDFDHLLNLFDSFWFQRQVLNNHPFPSNPQILQPQIQDPDPLPKESFLIPRLRTRSISED 60

Query: 61  ----------------------------SKEITGAES----------------RRRKPRG 120
                                       SK+I GAES                 RR+ RG
Sbjct: 61  LSSKLSFMSNSNSPDSVLLSPKLQTIFSSKDIAGAESPETSHKVEIERRPKTEYRRRLRG 120

Query: 121 RRIRGSENRSQLELEFEELKGFMDLGFVFSEEDKGSILASIVPGLNWLGKREE------- 173
           RR R SE+RS  ELEFEELKGFMDLGFVFSEEDKGS LASIVPGLN LGKREE       
Sbjct: 121 RRTRRSESRSLSELEFEELKGFMDLGFVFSEEDKGSSLASIVPGLNRLGKREEXXXXXXX 180

[Close]

BLAST of MELO3C025547.2 vs. NCBI nr
Match: XP_023520224.1 (uncharacterized protein LOC111783529 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163.7 bits (413), Expect = 5.6e-37
Identity = 110/251 (43.82%), Postives = 122/251 (48.61%), Query Frame = 0


Query: 1   MDFEQVLNLFDSFWFKREIFNKHPFP---------------------------------- 60
           MD EQVLNLFDSFWF+REIFNKHPFP                                  
Sbjct: 1   MDVEQVLNLFDSFWFEREIFNKHPFPTNPQNPRPENQDLDPLENSPPEEAFVPRICPRSI 60

Query: 61  -------------------------------SKEITGAES--------------RRRKPR 120
                                          S+++ G E+              +RR+  
Sbjct: 61  SEDLSSKLTFMSDSSSPDSVLFSPKLQTILSSQDMGGEEAPEKSRRVVIRQKRKQRRRIG 120

Query: 121 GRRIRGSENRSQLELEFEELKGFMDLGFVFSEEDKGSILASIVPGLNWLGKREEEEEGEE 173
           GR IRGSE+RS  ELEFEE+KGFMDLGFVFSE DK S LA IVPGLN LGKR+EEEE   
Sbjct: 121 GRSIRGSESRSLSELEFEEVKGFMDLGFVFSEGDKSSSLAWIVPGLNRLGKRDEEEEE-- 180

[Close]

BLAST of MELO3C025547.2 vs. NCBI nr
Match: XP_022927119.1 (uncharacterized protein LOC111434058 [Cucurbita moschata])

HSP 1 Score: 155.6 bits (392), Expect = 1.5e-34
Identity = 108/251 (43.03%), Postives = 115/251 (45.82%), Query Frame = 0


Query: 1   MDFEQVLNLFDSFWFKREIFNKHPFP---------------------------------- 60
           MD EQVL+LFDS WF+REIFNKHPFP                                  
Sbjct: 1   MDVEQVLDLFDSLWFEREIFNKHPFPTNPQNPRPENQDRDPLKNSPPEEPFVPRICPRSI 60

Query: 61  -------------------------------SKEITGAESRRRKPR-------------- 120
                                          SKEI G                       
Sbjct: 61  SEDLSSKLTFMSDSSSPDSVLFSPKLQTILSSKEIAGEXXXXXXXXXXXXXXXXXXXXIG 120

Query: 121 GRRIRGSENRSQLELEFEELKGFMDLGFVFSEEDKGSILASIVPGLNWLGKREEEEEGEE 173
           GR IRGSE+RS  ELEFEE+KGFMDLGFVFSE DK S LA IVPGLN LGKR+EEEE   
Sbjct: 121 GRSIRGSESRSLSELEFEEVKGFMDLGFVFSEGDKSSSLAWIVPGLNRLGKRDEEEEE-- 180

[Close]

BLAST of MELO3C025547.2 vs. NCBI nr
Match: XP_023001638.1 (uncharacterized protein LOC111495710 [Cucurbita maxima])

HSP 1 Score: 145.6 bits (366), Expect = 1.6e-31
Identity = 105/254 (41.34%), Postives = 110/254 (43.31%), Query Frame = 0


Query: 1   MDFEQVLNLFDSFWFKREIFNKHPFP---------------------------------- 60
           MD EQVLNLFDSFWF+REIFNKHPFP                                  
Sbjct: 1   MDVEQVLNLFDSFWFEREIFNKHPFPTNPQNPRPENQDRDPLKNSPPEEPFVPRICPRSI 60

Query: 61  -------------------------------SKEITGAESRRRKPR-------------- 120
                                          SK+I G                       
Sbjct: 61  SEDLSSKLTFMSDSSSPDSVLFSPKLQTILSSKDIAGEXXXXXXXXXXXXXXXXXXXXIG 120

Query: 121 GRRIRGSENRSQLELEFEELKGFMDLGFVFSEEDKGSILASIVPGLNWLGKR---EEEEE 173
           GR IRGSE+RS  ELEFEELKGFMDLGFVFSE DK S LA IVPGLN LGKR        
Sbjct: 121 GRSIRGSESRSLSELEFEELKGFMDLGFVFSEGDKSSSLAWIVPGLNRLGKRXXXXXXXX 180

[Close]

BLAST of MELO3C025547.2 vs. TAIR10
Match: AT2G42760.1 (unknown protein)

HSP 1 Score: 78.6 bits (192), Expect = 4.3e-15
Identity = 53/137 (38.69%), Postives = 70/137 (51.09%), Query Frame = 0


Query: 49  ENRSQLELEFEELKGFMDLGFVFSEED-KGSILASIVPGLNWLGK-------REEEEEGE 108
           + +S  +LE+EELKGFMDLGFVFSE+D K S L SI+PGL  L K               
Sbjct: 143 KGKSMSDLEYEELKGFMDLGFVFSEDDHKDSDLVSILPGLQRLVKXXXXXXXXXXXXXXX 202

Query: 109 EKLCAGEISRPYLSEAWETMEXXXXXXXXXXXXXXXXXXXXXXKMKWKFP----SNEIHM 168
                   +RPYLSEAW+                         ++KW+ P    ++E+ +
Sbjct: 203 XXXXXNRAARPYLSEAWD------------HCGGRKGKKQITPEIKWRVPAPAAASEVDL 262

Query: 169 KVNLKWWARAVASTVRS 174
           K NL+ WA AVAST+RS
Sbjct: 263 KDNLRLWAHAVASTIRS 267

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BLAST of MELO3C025547.2 vs. TrEMBL
Match: tr|A0A0A0LT30|A0A0A0LT30_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181530 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 7.4e-62
Identity = 142/171 (83.04%), Postives = 148/171 (86.55%), Query Frame = 0


Query: 2   DFEQVLNLFDSFWFKREIFNKHPFPSKEITGAESRRRKPRGRRIRGSENRSQLELEFEEL 61
           DFEQVLNLFDSFWFKR+IFNKHPFPSKEI GAES RRKPRGR+ RG+ENRSQLELEFEEL
Sbjct: 3   DFEQVLNLFDSFWFKRKIFNKHPFPSKEIAGAES-RRKPRGRKTRGAENRSQLELEFEEL 62

Query: 62  KGFMDLGFVFSEEDKGSILASIVPGLNWLGKREEEEEGEEKLCAGEISRPYLSEAWETME 121
           KGFMDLGFVFSEEDKGSILASIVPGLNWLGKR        KLC GEISRPYLSEAWETM 
Sbjct: 63  KGFMDLGFVFSEEDKGSILASIVPGLNWLGKRXXXXXXXXKLC-GEISRPYLSEAWETM- 122

Query: 122 XXXXXXXXXXXXXXXXXXXXXXKMKWKFPSNEIHMKVNLKWWARAVASTVR 173
              XXXXXXXXXXXXXX      MKW+FPSNEIHMKVNLKWWA AVAST++
Sbjct: 123 ---XXXXXXXXXXXXXXLKKPLMMKWRFPSNEIHMKVNLKWWAHAVASTIK 167

[Close]

BLAST of MELO3C025547.2 vs. TrEMBL
Match: tr|A0A0A0LV26|A0A0A0LV26_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470240 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.7e-37
Identity = 111/260 (42.69%), Postives = 122/260 (46.92%), Query Frame = 0


Query: 1   MDFEQVLNLFDSFWFKREIFNKHPFP---------------------------------- 60
           MDF+ +LNLFDSFWF+R++ N HPFP                                  
Sbjct: 1   MDFDHLLNLFDSFWFQRQVLNNHPFPSNPQILQPQIQDPDPLPKESFLIPRLRTRSISED 60

Query: 61  ----------------------------SKEITGAES----------------RRRKPRG 120
                                       SK+I GAES                 RR+ RG
Sbjct: 61  LSSKLSFMSNSNSPDSVLLSPKLQTIFSSKDIAGAESPETSHKVEIERRPKTEYRRRLRG 120

Query: 121 RRIRGSENRSQLELEFEELKGFMDLGFVFSEEDKGSILASIVPGLNWLGKREE------- 173
           RR R SE+RS  ELEFEELKGFMDLGFVFSEEDKGS LASIVPGLN LGKREE       
Sbjct: 121 RRTRRSESRSLSELEFEELKGFMDLGFVFSEEDKGSSLASIVPGLNRLGKREEXXXXXXX 180

[Close]

BLAST of MELO3C025547.2 vs. TrEMBL
Match: tr|B9S8C1|B9S8C1_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1250530 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.2e-25
Identity = 78/157 (49.68%), Postives = 96/157 (61.15%), Query Frame = 0


Query: 24  PFPSKEITGAESRRRKPRGRRIRGSE--NRSQLELEFEELKGFMDLGFVFSEEDKGSILA 83
           P  ++ +   ES ++K R RR +G +  ++S  ELEFEE+KGFMDLGFVFSEEDK S L 
Sbjct: 152 PLQTERLNVQESPKKKARSRR-KGKKALSKSLSELEFEEVKGFMDLGFVFSEEDKDSSLV 211

Query: 84  SIVPGLNWLG-KREEEEEGEEKLCA---GEISRPYLSEAWETMEXXXXXXXXXXXXXXXX 143
           SI+PGL  LG K +EEE+ EEK  A   G +SRPYLSEAWE ++                
Sbjct: 212 SIIPGLQRLGNKDQEEEKKEEKNSAFDEGAVSRPYLSEAWEALDNRKKEEPL-------- 271

Query: 144 XXXXXXKMKWKFP--SNEIHMKVNLKWWARAVASTVR 173
                  M W+ P  +NEI MK NLKWWA  VASTVR
Sbjct: 272 -------MNWRIPASTNEIDMKYNLKWWAHTVASTVR 292

[Close]

BLAST of MELO3C025547.2 vs. TrEMBL
Match: tr|A0A151S6D8|A0A151S6D8_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_027836 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 9.5e-25
Identity = 80/201 (39.80%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 1   MDFEQVLNLFDSFWFKREIFNKH---PFPSKEITGAESRRRKP----------------- 60
           MD E+VL LFDS WF  +   ++     P+     ++ + ++P                 
Sbjct: 1   MDAEEVLKLFDSCWFGIQYLKEYTSFSAPTSSHENSDHQIKEPSEPMLLRIQSTQVQHEV 60

Query: 61  -------RGRRIRGSENRSQLELEFEELKGFMDLGFVFSEEDKGSILASIVPGLNWLGKR 120
                  R  R +  +++S  +LEFEELKGFMDLGFVFSEEDK S LASI+PGL  LGK 
Sbjct: 61  LPKKNITRRERKKKRQSKSLSDLEFEELKGFMDLGFVFSEEDKDSSLASIIPGLQRLGKS 120

Query: 121 EEEEEGEEKLCAGEISRPYLSEAWETMEXXXXXXXXXXXXXXXXXXXXXXKMKWKFP--S 173
           +EEEE  ++     + RPYLSEAW+  E                       M WK P  +
Sbjct: 121 DEEEEDSDE---SSVQRPYLSEAWKVQERRKKENNPL--------------MNWKIPPLN 180

[Close]

BLAST of MELO3C025547.2 vs. TrEMBL
Match: tr|A0A2P6Q4W2|A0A2P6Q4W2_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0011511 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.1e-24
Identity = 74/142 (52.11%), Postives = 86/142 (60.56%), Query Frame = 0


Query: 34  ESRRRKPRGRRIRGSENRSQLELEFEELKGFMDLGFVFSEEDKGSILASIVPGLNWLGKR 93
           ES ++    RR +   ++S  +L+FEELKGFMDLGFVFSEEDK S LASI+PGL  LGK+
Sbjct: 111 ESSKKAKIERRRKKGGSKSLTDLQFEELKGFMDLGFVFSEEDKDSNLASIIPGLKKLGKK 170

Query: 94  EEEEEGEEKL-CAGEISRPYLSEAWETMEXXXXXXXXXXXXXXXXXXXXXXKMKWKFP-- 153
           ++ E  EE       ISRPYLSEAWE ME                       M W+FP  
Sbjct: 171 DDGEVDEEAFDDESAISRPYLSEAWEVMEKRKKEKKPL--------------MDWRFPSL 230

Query: 154 SNEIHMKVNLKWWARAVASTVR 173
           SNEI MK NLKWWA  VASTVR
Sbjct: 231 SNEIDMKDNLKWWAHTVASTVR 238

The following BLAST results are available for this feature:

BLAST of MELO3C025547.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648467.1	1.1e-61	83.04	PREDICTED: cyclin-dependent kinase 11B-like [Cucumis sativus] >KGN65040.1 hypoth...	[more]
KGN65608.1	2.5e-37	42.69	hypothetical protein Csa_1G470240 [Cucumis sativus]	[more]
XP_023520224.1	5.6e-37	43.82	uncharacterized protein LOC111783529 [Cucurbita pepo subsp. pepo]	[more]
XP_022927119.1	1.5e-34	43.03	uncharacterized protein LOC111434058 [Cucurbita moschata]	[more]
XP_023001638.1	1.6e-31	41.34	uncharacterized protein LOC111495710 [Cucurbita maxima]	[more]

BLAST of MELO3C025547.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42760.1	4.3e-15	38.69	unknown protein	[more]

BLAST of MELO3C025547.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C025547.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT30\|A0A0A0LT30_CUCSA	7.4e-62	83.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181530 PE=4 SV=1	[more]
tr\|A0A0A0LV26\|A0A0A0LV26_CUCSA	1.7e-37	42.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470240 PE=4 SV=1	[more]
tr\|B9S8C1\|B9S8C1_RICCO	3.2e-25	49.68	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1250530 PE=4 SV=1	[more]
tr\|A0A151S6D8\|A0A151S6D8_CAJCA	9.5e-25	39.80	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_027836 PE=4 SV=1	[more]
tr\|A0A2P6Q4W2\|A0A2P6Q4W2_ROSCH	2.1e-24	52.11	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0011511 PE=4...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012881	DUF1685

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025547.2.1	MELO3C025547.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 113..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..135
None	No IPR available	PANTHER	PTHR31865:SF7	SUBFAMILY NOT NAMED	coord: 1..29 coord: 34..172
None	No IPR available	PANTHER	PTHR31865	FAMILY NOT NAMED	coord: 1..29 coord: 34..172
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 58..88 e-value: 2.1E-4 score: 20.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C025547.2	Csa1G181530	Cucumber (Chinese Long) v2	cumedB024
MELO3C025547.2	CSPI01G15820	Wild cucumber (PI 183967)	cpimedB025
MELO3C025547.2	Cucsa.180450	Cucumber (Gy14) v1	cgymedB320
MELO3C025547.2	Lsi02G011210	Bottle gourd (USVL1VR-Ls)	lsimedB184
MELO3C025547.2	Cla97C01G010360	Watermelon (97103) v2	medwmbB126
MELO3C025547.2	Bhi08G000638	Wax gourd	medwgoB182
MELO3C025547.2	CsaV3_1G017080	Cucumber (Chinese Long) v3	cucmedB025

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C025547.2	Cucumber (Chinese Long) v3	cucmedB514
MELO3C025547.2	Cucumber (Gy14) v2	cgybmedB022
MELO3C025547.2	Cucurbita maxima (Rimu)	cmamedB216
MELO3C025547.2	Cucurbita maxima (Rimu)	cmamedB414
MELO3C025547.2	Cucurbita moschata (Rifu)	cmomedB204
MELO3C025547.2	Cucurbita moschata (Rifu)	cmomedB410
MELO3C025547.2	Cucurbita pepo (Zucchini)	cpemedB035
MELO3C025547.2	Cucurbita pepo (Zucchini)	cpemedB564
MELO3C025547.2	Watermelon (Charleston Gray)	medwcgB126
MELO3C025547.2	Watermelon (97103) v1	medwmB154
MELO3C025547.2	Silver-seed gourd	carmedB0051
MELO3C025547.2	Silver-seed gourd	carmedB1017