CSPI01G15820 (gene) Wild cucumber (PI 183967)

NameCSPI01G15820
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionDUF1685 family protein
LocationChr1 : 11334140 .. 11334936 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTGGGGCGCCACTTTCCTTCAACTTTCCTAGAAAAGACGATAGAACTAAAAGAAAACAAAAACAAAAATGGGACGCTTATTTTTCTTTCATAGAAATGTTGACCACTTCAAGCCCAATTTGGTGACAACAAGTCAACATTTTAAAACCCCTTACAGAGTTTGTGAAGACCAAATTAGCCAAACAAACAAAACAGAGATCTCTAATTGATGGACGACTTTGAGCAAGTGCTGAATCTCTTCGATTCTTTTTGGTTCAAGCATAAAATCTTCAACAAACACCCCTTTCCAAGAAAAGAAATCGCCGGAGCCGAGTCAAGGAGGAAACCTAGGGGAAGAAAAACGAGGGGGGCGGAAAATAGGAGCCAATGGGAGCTGGAATTTGAAGAGCTAAAAGGGTTTATGGATTTGGGATTTGTTTTCTCCGAGGAGGATAAAGGTTCGATCTTGGCGTCCATAGTTCCTGGATTGAATTGGCTAGGAAAAAGGGAAGAAGAAGAAGAAGAAGAACAAAAGTTGTGTGGTGAAATTTCTAGGCCTTATCTTTCAGAAGCTTGGGAGACTATGGAGGAAGAAGAAGAGGAGGAGGAGGAAGAAGAAAAGGTGGAATTGAAGAAGCCATCGATGATGAAATGGAGGTTTCCTTCTAATGAAATTCATATGAAAGTTAATCTCAAATGGTGGGCTCATGCTGTTGCTTCAACTATTAAATGACTCTACTCTAATTTTTTTTCTTCATACTTTTGTTAAGTATAACAGCGATTCAACCTCCAGTTTTTAGGGAGTAAGGTCATGTAA

mRNA sequence

ATGGACGACTTTGAGCAAGTGCTGAATCTCTTCGATTCTTTTTGGTTCAAGCATAAAATCTTCAACAAACACCCCTTTCCAAGAAAAGAAATCGCCGGAGCCGAGTCAAGGAGGAAACCTAGGGGAAGAAAAACGAGGGGGGCGGAAAATAGGAGCCAATGGGAGCTGGAATTTGAAGAGCTAAAAGGGTTTATGGATTTGGGATTTGTTTTCTCCGAGGAGGATAAAGGTTCGATCTTGGCGTCCATAGTTCCTGGATTGAATTGGCTAGGAAAAAGGGAAGAAGAAGAAGAAGAAGAACAAAAGTTGTGTGGTGAAATTTCTAGGCCTTATCTTTCAGAAGCTTGGGAGACTATGGAGGAAGAAGAAGAGGAGGAGGAGGAAGAAGAAAAGGTGGAATTGAAGAAGCCATCGATGATGAAATGGAGGTTTCCTTCTAATGAAATTCATATGAAAGTTAATCTCAAATGGTGGGCTCATGCTGTTGCTTCAACTATTAAATGA

Coding sequence (CDS)

ATGGACGACTTTGAGCAAGTGCTGAATCTCTTCGATTCTTTTTGGTTCAAGCATAAAATCTTCAACAAACACCCCTTTCCAAGAAAAGAAATCGCCGGAGCCGAGTCAAGGAGGAAACCTAGGGGAAGAAAAACGAGGGGGGCGGAAAATAGGAGCCAATGGGAGCTGGAATTTGAAGAGCTAAAAGGGTTTATGGATTTGGGATTTGTTTTCTCCGAGGAGGATAAAGGTTCGATCTTGGCGTCCATAGTTCCTGGATTGAATTGGCTAGGAAAAAGGGAAGAAGAAGAAGAAGAAGAACAAAAGTTGTGTGGTGAAATTTCTAGGCCTTATCTTTCAGAAGCTTGGGAGACTATGGAGGAAGAAGAAGAGGAGGAGGAGGAAGAAGAAAAGGTGGAATTGAAGAAGCCATCGATGATGAAATGGAGGTTTCCTTCTAATGAAATTCATATGAAAGTTAATCTCAAATGGTGGGCTCATGCTGTTGCTTCAACTATTAAATGA
BLAST of CSPI01G15820 vs. TrEMBL
Match: A0A0A0LT30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181530 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 6.6e-86
Identity = 163/167 (97.60%), Postives = 163/167 (97.60%), Query Frame = 1

Query: 1   MDDFEQVLNLFDSFWFKHKIFNKHPFPRKEIAGAESRRKPRGRKTRGAENRSQWELEFEE 60
           MDDFEQVLNLFDSFWFK KIFNKHPFP KEIAGAESRRKPRGRKTRGAENRSQ ELEFEE
Sbjct: 1   MDDFEQVLNLFDSFWFKRKIFNKHPFPSKEIAGAESRRKPRGRKTRGAENRSQLELEFEE 60

Query: 61  LKGFMDLGFVFSEEDKGSILASIVPGLNWLGKREEEEEEEQKLCGEISRPYLSEAWETME 120
           LKGFMDLGFVFSEEDKGSILASIVPGLNWLGKREEEEEEEQKLCGEISRPYLSEAWETME
Sbjct: 61  LKGFMDLGFVFSEEDKGSILASIVPGLNWLGKREEEEEEEQKLCGEISRPYLSEAWETME 120

Query: 121 EEEEEEEEEEKVELKKPSMMKWRFPSNEIHMKVNLKWWAHAVASTIK 168
           EEEEEEEEEEKVELKKP MMKWRFPSNEIHMKVNLKWWAHAVASTIK
Sbjct: 121 EEEEEEEEEEKVELKKPLMMKWRFPSNEIHMKVNLKWWAHAVASTIK 167

BLAST of CSPI01G15820 vs. TrEMBL
Match: A0A0A0LV26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G470240 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.2e-44
Identity = 109/170 (64.12%), Postives = 122/170 (71.76%), Query Frame = 1

Query: 26  FPRKEIAGAES-----------------RRKPRGRKTRGAENRSQWELEFEELKGFMDLG 85
           F  K+IAGAES                 RR+ RGR+TR +E+RS  ELEFEELKGFMDLG
Sbjct: 87  FSSKDIAGAESPETSHKVEIERRPKTEYRRRLRGRRTRRSESRSLSELEFEELKGFMDLG 146

Query: 86  FVFSEEDKGSILASIVPGLNWLGKR-----------EEEEEEEQKLCGEISRPYLSEAWE 145
           FVFSEEDKGS LASIVPGLN LGKR           EEE+EEE+KL GEISRPYLSEAWE
Sbjct: 147 FVFSEEDKGSSLASIVPGLNRLGKREEKGNKEGEEEEEEKEEERKLGGEISRPYLSEAWE 206

Query: 146 TMEEEEEEEEEEEKVELKKPSMMKWRFPSNEIHMKVNLKWWAHAVASTIK 168
            + EEEE+EE      LK+P MMKWRFPSN+I MK NLKWWAHAVAST++
Sbjct: 207 AIAEEEEKEE-----LLKRPLMMKWRFPSNQIDMKDNLKWWAHAVASTVR 251

BLAST of CSPI01G15820 vs. TrEMBL
Match: A9P9U9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s05860g PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.1e-27
Identity = 75/147 (51.02%), Postives = 98/147 (66.67%), Query Frame = 1

Query: 25  PFPRKEIAGAESRRKPRGRKTRGAENRSQWELEFEELKGFMDLGFVFSEEDKGSILASIV 84
           P  R  I  +  ++  RGRK +   ++S  ELE+EEL+GFMDLGFVFSEEDK S LASI+
Sbjct: 104 PTERVYILESPKKKVSRGRKGKKVTSKSLSELEYEELRGFMDLGFVFSEEDKDSNLASII 163

Query: 85  PGLNWLGKREEEEE--EEQKLCGEISRPYLSEAWETMEEEEEEEEEEEKVELKKPSMMKW 144
           PGL+ LGK++EEE   +E  +C    RPYLSEAWE +E++ +EE            +M W
Sbjct: 164 PGLHRLGKKDEEEAILDEPTVC----RPYLSEAWEVLEKKRKEE-----------PLMNW 223

Query: 145 RFPS--NEIHMKVNLKWWAHAVASTIK 168
           R P+  NEI MK NL+WWAH VAST++
Sbjct: 224 RIPALGNEIDMKDNLRWWAHTVASTVR 235

BLAST of CSPI01G15820 vs. TrEMBL
Match: B9S8C1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1250530 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.6e-26
Identity = 78/153 (50.98%), Postives = 101/153 (66.01%), Query Frame = 1

Query: 22  NKHPFPRKEIAGAESRRKPRGRKTRGAENRSQWELEFEELKGFMDLGFVFSEEDKGSILA 81
           N    P+K+   A SRRK  G+K   A ++S  ELEFEE+KGFMDLGFVFSEEDK S L 
Sbjct: 159 NVQESPKKK---ARSRRK--GKK---ALSKSLSELEFEEVKGFMDLGFVFSEEDKDSSLV 218

Query: 82  SIVPGLNWLGKREEEEEEEQKLC-----GEISRPYLSEAWETMEEEEEEEEEEEKVELKK 141
           SI+PGL  LG +++EEE++++       G +SRPYLSEAWE ++  ++EE          
Sbjct: 219 SIIPGLQRLGNKDQEEEKKEEKNSAFDEGAVSRPYLSEAWEALDNRKKEE---------- 278

Query: 142 PSMMKWRFP--SNEIHMKVNLKWWAHAVASTIK 168
             +M WR P  +NEI MK NLKWWAH VAST++
Sbjct: 279 -PLMNWRIPASTNEIDMKYNLKWWAHTVASTVR 292

BLAST of CSPI01G15820 vs. TrEMBL
Match: I1KSG1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G118000 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-25
Identity = 75/146 (51.37%), Postives = 96/146 (65.75%), Query Frame = 1

Query: 27  PRKEIAGAESRRKPRGRKTRGA-ENRSQWELEFEELKGFMDLGFVFSEEDKGSILASIVP 86
           P  E+   +  +K    +TR   E++S  +LEFEELKGFMDLGFVFSEEDK S LASI+P
Sbjct: 112 PHPEVLCPKKNKKISSSRTRKRRESKSLSDLEFEELKGFMDLGFVFSEEDKDSSLASIIP 171

Query: 87  GLNWLGKREEEEEEEQKLCGEIS--RPYLSEAWETMEEEEEEEEEEEKVELKKPSMMKWR 146
           GL  L K+EEEEEE +  C EIS  RPYLSEAWE  E +  ++E          S++ W+
Sbjct: 172 GLQRLRKKEEEEEENED-CDEISVPRPYLSEAWEVQEYDRRKKEN---------SLVNWK 231

Query: 147 FP--SNEIHMKVNLKWWAHAVASTIK 168
            P  +NE  MK +L+WWAH VAST++
Sbjct: 232 MPAINNETDMKESLRWWAHTVASTVR 247

BLAST of CSPI01G15820 vs. TAIR10
Match: AT2G42760.1 (AT2G42760.1 unknown protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-20
Identity = 68/148 (45.95%), Postives = 94/148 (63.51%), Query Frame = 1

Query: 35  ESRRKPRGRKT--RGAENRSQWELEFEELKGFMDLGFVFSEED-KGSILASIVPGLNWLG 94
           E +RK + +K+  R  + +S  +LE+EELKGFMDLGFVFSE+D K S L SI+PGL  L 
Sbjct: 127 EEQRKKKKKKSNVRTRKGKSMSDLEYEELKGFMDLGFVFSEDDHKDSDLVSILPGLQRLV 186

Query: 95  KR-------EEEEEEEQKLCG-EISRPYLSEAWETMEEEEEEEEEEEKVELKKPSMMKWR 154
           K+       EEEEEEE K+ G   +RPYLSEAW+     + +++   ++        KWR
Sbjct: 187 KKDDGVTKEEEEEEEEDKIGGNRAARPYLSEAWDHCGGRKGKKQITPEI--------KWR 246

Query: 155 FP----SNEIHMKVNLKWWAHAVASTIK 168
            P    ++E+ +K NL+ WAHAVASTI+
Sbjct: 247 VPAPAAASEVDLKDNLRLWAHAVASTIR 266

BLAST of CSPI01G15820 vs. NCBI nr
Match: gi|778665020|ref|XP_011648467.1| (PREDICTED: cyclin-dependent kinase 11B-like [Cucumis sativus])

HSP 1 Score: 324.7 bits (831), Expect = 9.5e-86
Identity = 163/167 (97.60%), Postives = 163/167 (97.60%), Query Frame = 1

Query: 1   MDDFEQVLNLFDSFWFKHKIFNKHPFPRKEIAGAESRRKPRGRKTRGAENRSQWELEFEE 60
           MDDFEQVLNLFDSFWFK KIFNKHPFP KEIAGAESRRKPRGRKTRGAENRSQ ELEFEE
Sbjct: 1   MDDFEQVLNLFDSFWFKRKIFNKHPFPSKEIAGAESRRKPRGRKTRGAENRSQLELEFEE 60

Query: 61  LKGFMDLGFVFSEEDKGSILASIVPGLNWLGKREEEEEEEQKLCGEISRPYLSEAWETME 120
           LKGFMDLGFVFSEEDKGSILASIVPGLNWLGKREEEEEEEQKLCGEISRPYLSEAWETME
Sbjct: 61  LKGFMDLGFVFSEEDKGSILASIVPGLNWLGKREEEEEEEQKLCGEISRPYLSEAWETME 120

Query: 121 EEEEEEEEEEKVELKKPSMMKWRFPSNEIHMKVNLKWWAHAVASTIK 168
           EEEEEEEEEEKVELKKP MMKWRFPSNEIHMKVNLKWWAHAVASTIK
Sbjct: 121 EEEEEEEEEEKVELKKPLMMKWRFPSNEIHMKVNLKWWAHAVASTIK 167

BLAST of CSPI01G15820 vs. NCBI nr
Match: gi|700210512|gb|KGN65608.1| (hypothetical protein Csa_1G470240 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 1.2e-43
Identity = 109/170 (64.12%), Postives = 122/170 (71.76%), Query Frame = 1

Query: 26  FPRKEIAGAES-----------------RRKPRGRKTRGAENRSQWELEFEELKGFMDLG 85
           F  K+IAGAES                 RR+ RGR+TR +E+RS  ELEFEELKGFMDLG
Sbjct: 87  FSSKDIAGAESPETSHKVEIERRPKTEYRRRLRGRRTRRSESRSLSELEFEELKGFMDLG 146

Query: 86  FVFSEEDKGSILASIVPGLNWLGKR-----------EEEEEEEQKLCGEISRPYLSEAWE 145
           FVFSEEDKGS LASIVPGLN LGKR           EEE+EEE+KL GEISRPYLSEAWE
Sbjct: 147 FVFSEEDKGSSLASIVPGLNRLGKREEKGNKEGEEEEEEKEEERKLGGEISRPYLSEAWE 206

Query: 146 TMEEEEEEEEEEEKVELKKPSMMKWRFPSNEIHMKVNLKWWAHAVASTIK 168
            + EEEE+EE      LK+P MMKWRFPSN+I MK NLKWWAHAVAST++
Sbjct: 207 AIAEEEEKEE-----LLKRPLMMKWRFPSNQIDMKDNLKWWAHAVASTVR 251

BLAST of CSPI01G15820 vs. NCBI nr
Match: gi|743911826|ref|XP_010999777.1| (PREDICTED: uncharacterized protein LOC105107522 [Populus euphratica])

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-27
Identity = 76/147 (51.70%), Postives = 98/147 (66.67%), Query Frame = 1

Query: 25  PFPRKEIAGAESRRKPRGRKTRGAENRSQWELEFEELKGFMDLGFVFSEEDKGSILASIV 84
           P  R  I  +  ++  RGRK +   ++S  ELE+EELKGFMDLGFVFSEEDK S LASI+
Sbjct: 104 PTERVYILESPKKKVSRGRKAKKVTSKSLSELEYEELKGFMDLGFVFSEEDKDSNLASII 163

Query: 85  PGLNWLGKREEEEE--EEQKLCGEISRPYLSEAWETMEEEEEEEEEEEKVELKKPSMMKW 144
           PGL+ LGK++EEE   +E  +C    RPYLSEAWE +E++ +EE            +M W
Sbjct: 164 PGLHRLGKKDEEEAILDEPTVC----RPYLSEAWEVLEKKRKEE-----------PLMNW 223

Query: 145 RFPS--NEIHMKVNLKWWAHAVASTIK 168
           R P+  NEI MK NL+WWAH VAST++
Sbjct: 224 RVPALGNEIDMKDNLRWWAHTVASTVR 235

BLAST of CSPI01G15820 vs. NCBI nr
Match: gi|566165145|ref|XP_002305058.2| (hypothetical protein POPTR_0004s05860g [Populus trichocarpa])

HSP 1 Score: 129.4 bits (324), Expect = 5.8e-27
Identity = 75/147 (51.02%), Postives = 98/147 (66.67%), Query Frame = 1

Query: 25  PFPRKEIAGAESRRKPRGRKTRGAENRSQWELEFEELKGFMDLGFVFSEEDKGSILASIV 84
           P  R  I  +  ++  RGRK +   ++S  ELE+EEL+GFMDLGFVFSEEDK S LASI+
Sbjct: 104 PTERVYILESPKKKVSRGRKGKKVTSKSLSELEYEELRGFMDLGFVFSEEDKDSNLASII 163

Query: 85  PGLNWLGKREEEEE--EEQKLCGEISRPYLSEAWETMEEEEEEEEEEEKVELKKPSMMKW 144
           PGL+ LGK++EEE   +E  +C    RPYLSEAWE +E++ +EE            +M W
Sbjct: 164 PGLHRLGKKDEEEAILDEPTVC----RPYLSEAWEVLEKKRKEE-----------PLMNW 223

Query: 145 RFPS--NEIHMKVNLKWWAHAVASTIK 168
           R P+  NEI MK NL+WWAH VAST++
Sbjct: 224 RIPALGNEIDMKDNLRWWAHTVASTVR 235

BLAST of CSPI01G15820 vs. NCBI nr
Match: gi|223538493|gb|EEF40098.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 126.7 bits (317), Expect = 3.8e-26
Identity = 78/153 (50.98%), Postives = 101/153 (66.01%), Query Frame = 1

Query: 22  NKHPFPRKEIAGAESRRKPRGRKTRGAENRSQWELEFEELKGFMDLGFVFSEEDKGSILA 81
           N    P+K+   A SRRK  G+K   A ++S  ELEFEE+KGFMDLGFVFSEEDK S L 
Sbjct: 159 NVQESPKKK---ARSRRK--GKK---ALSKSLSELEFEEVKGFMDLGFVFSEEDKDSSLV 218

Query: 82  SIVPGLNWLGKREEEEEEEQKLC-----GEISRPYLSEAWETMEEEEEEEEEEEKVELKK 141
           SI+PGL  LG +++EEE++++       G +SRPYLSEAWE ++  ++EE          
Sbjct: 219 SIIPGLQRLGNKDQEEEKKEEKNSAFDEGAVSRPYLSEAWEALDNRKKEE---------- 278

Query: 142 PSMMKWRFP--SNEIHMKVNLKWWAHAVASTIK 168
             +M WR P  +NEI MK NLKWWAH VAST++
Sbjct: 279 -PLMNWRIPASTNEIDMKYNLKWWAHTVASTVR 292

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LT30_CUCSA6.6e-8697.60Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181530 PE=4 SV=1[more]
A0A0A0LV26_CUCSA8.2e-4464.12Uncharacterized protein OS=Cucumis sativus GN=Csa_1G470240 PE=4 SV=1[more]
A9P9U9_POPTR4.1e-2751.02Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s05860g PE=2 SV=1[more]
B9S8C1_RICCO2.6e-2650.98Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1250530 PE=4 SV=1[more]
I1KSG1_SOYBN1.3e-2551.37Uncharacterized protein OS=Glycine max GN=GLYMA_08G118000 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G42760.11.1e-2045.95 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778665020|ref|XP_011648467.1|9.5e-8697.60PREDICTED: cyclin-dependent kinase 11B-like [Cucumis sativus][more]
gi|700210512|gb|KGN65608.1|1.2e-4364.12hypothetical protein Csa_1G470240 [Cucumis sativus][more]
gi|743911826|ref|XP_010999777.1|2.0e-2751.70PREDICTED: uncharacterized protein LOC105107522 [Populus euphratica][more]
gi|566165145|ref|XP_002305058.2|5.8e-2751.02hypothetical protein POPTR_0004s05860g [Populus trichocarpa][more]
gi|223538493|gb|EEF40098.1|3.8e-2650.98conserved hypothetical protein [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012881DUF1685
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G15820.1CSPI01G15820.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012881Protein of unknown function DUF1685PFAMPF07939DUF1685coord: 58..88
score: 2.
NoneNo IPR availablePANTHERPTHR31865FAMILY NOT NAMEDcoord: 28..167
score: 5.0
NoneNo IPR availablePANTHERPTHR31865:SF7SUBFAMILY NOT NAMEDcoord: 28..167
score: 5.0

The following gene(s) are paralogous to this gene:

None