CSPI01G15820 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCTGGGGCGCCACTTTCCTTCAACTTTCCTAGAAAAGACGATAGAACTAAAAGAAAACAAAAACAAAAATGGGACGCTTATTTTTCTTTCATAGAAATGTTGACCACTTCAAGCCCAATTTGGTGACAACAAGTCAACATTTTAAAACCCCTTACAGAGTTTGTGAAGACCAAATTAGCCAAACAAACAAAACAGAGATCTCTAATTGATGGACGACTTTGAGCAAGTGCTGAATCTCTTCGATTCTTTTTGGTTCAAGCATAAAATCTTCAACAAACACCCCTTTCCAAGAAAAGAAATCGCCGGAGCCGAGTCAAGGAGGAAACCTAGGGGAAGAAAAACGAGGGGGGCGGAAAATAGGAGCCAATGGGAGCTGGAATTTGAAGAGCTAAAAGGGTTTATGGATTTGGGATTTGTTTTCTCCGAGGAGGATAAAGGTTCGATCTTGGCGTCCATAGTTCCTGGATTGAATTGGCTAGGAAAAAGGGAAGAAGAAGAAGAAGAAGAACAAAAGTTGTGTGGTGAAATTTCTAGGCCTTATCTTTCAGAAGCTTGGGAGACTATGGAGGAAGAAGAAGAGGAGGAGGAGGAAGAAGAAAAGGTGGAATTGAAGAAGCCATCGATGATGAAATGGAGGTTTCCTTCTAATGAAATTCATATGAAAGTTAATCTCAAATGGTGGGCTCATGCTGTTGCTTCAACTATTAAATGACTCTACTCTAATTTTTTTTCTTCATACTTTTGTTAAGTATAACAGCGATTCAACCTCCAGTTTTTAGGGAGTAAGGTCATGTAA ATGGACGACTTTGAGCAAGTGCTGAATCTCTTCGATTCTTTTTGGTTCAAGCATAAAATCTTCAACAAACACCCCTTTCCAAGAAAAGAAATCGCCGGAGCCGAGTCAAGGAGGAAACCTAGGGGAAGAAAAACGAGGGGGGCGGAAAATAGGAGCCAATGGGAGCTGGAATTTGAAGAGCTAAAAGGGTTTATGGATTTGGGATTTGTTTTCTCCGAGGAGGATAAAGGTTCGATCTTGGCGTCCATAGTTCCTGGATTGAATTGGCTAGGAAAAAGGGAAGAAGAAGAAGAAGAAGAACAAAAGTTGTGTGGTGAAATTTCTAGGCCTTATCTTTCAGAAGCTTGGGAGACTATGGAGGAAGAAGAAGAGGAGGAGGAGGAAGAAGAAAAGGTGGAATTGAAGAAGCCATCGATGATGAAATGGAGGTTTCCTTCTAATGAAATTCATATGAAAGTTAATCTCAAATGGTGGGCTCATGCTGTTGCTTCAACTATTAAATGA ATGGACGACTTTGAGCAAGTGCTGAATCTCTTCGATTCTTTTTGGTTCAAGCATAAAATCTTCAACAAACACCCCTTTCCAAGAAAAGAAATCGCCGGAGCCGAGTCAAGGAGGAAACCTAGGGGAAGAAAAACGAGGGGGGCGGAAAATAGGAGCCAATGGGAGCTGGAATTTGAAGAGCTAAAAGGGTTTATGGATTTGGGATTTGTTTTCTCCGAGGAGGATAAAGGTTCGATCTTGGCGTCCATAGTTCCTGGATTGAATTGGCTAGGAAAAAGGGAAGAAGAAGAAGAAGAAGAACAAAAGTTGTGTGGTGAAATTTCTAGGCCTTATCTTTCAGAAGCTTGGGAGACTATGGAGGAAGAAGAAGAGGAGGAGGAGGAAGAAGAAAAGGTGGAATTGAAGAAGCCATCGATGATGAAATGGAGGTTTCCTTCTAATGAAATTCATATGAAAGTTAATCTCAAATGGTGGGCTCATGCTGTTGCTTCAACTATTAAATGA
BLAST of CSPI01G15820 vs. TrEMBL
Match: A0A0A0LT30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181530 PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 6.6e-86 Identity = 163/167 (97.60%), Postives = 163/167 (97.60%), Query Frame = 1
BLAST of CSPI01G15820 vs. TrEMBL
Match: A0A0A0LV26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G470240 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 8.2e-44 Identity = 109/170 (64.12%), Postives = 122/170 (71.76%), Query Frame = 1
BLAST of CSPI01G15820 vs. TrEMBL
Match: A9P9U9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s05860g PE=2 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 4.1e-27 Identity = 75/147 (51.02%), Postives = 98/147 (66.67%), Query Frame = 1
BLAST of CSPI01G15820 vs. TrEMBL
Match: B9S8C1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1250530 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 2.6e-26 Identity = 78/153 (50.98%), Postives = 101/153 (66.01%), Query Frame = 1
BLAST of CSPI01G15820 vs. TrEMBL
Match: I1KSG1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G118000 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.3e-25 Identity = 75/146 (51.37%), Postives = 96/146 (65.75%), Query Frame = 1
BLAST of CSPI01G15820 vs. TAIR10
Match: AT2G42760.1 (AT2G42760.1 unknown protein) HSP 1 Score: 97.1 bits (240), Expect = 1.1e-20 Identity = 68/148 (45.95%), Postives = 94/148 (63.51%), Query Frame = 1
BLAST of CSPI01G15820 vs. NCBI nr
Match: gi|778665020|ref|XP_011648467.1| (PREDICTED: cyclin-dependent kinase 11B-like [Cucumis sativus]) HSP 1 Score: 324.7 bits (831), Expect = 9.5e-86 Identity = 163/167 (97.60%), Postives = 163/167 (97.60%), Query Frame = 1
BLAST of CSPI01G15820 vs. NCBI nr
Match: gi|700210512|gb|KGN65608.1| (hypothetical protein Csa_1G470240 [Cucumis sativus]) HSP 1 Score: 184.9 bits (468), Expect = 1.2e-43 Identity = 109/170 (64.12%), Postives = 122/170 (71.76%), Query Frame = 1
BLAST of CSPI01G15820 vs. NCBI nr
Match: gi|743911826|ref|XP_010999777.1| (PREDICTED: uncharacterized protein LOC105107522 [Populus euphratica]) HSP 1 Score: 131.0 bits (328), Expect = 2.0e-27 Identity = 76/147 (51.70%), Postives = 98/147 (66.67%), Query Frame = 1
BLAST of CSPI01G15820 vs. NCBI nr
Match: gi|566165145|ref|XP_002305058.2| (hypothetical protein POPTR_0004s05860g [Populus trichocarpa]) HSP 1 Score: 129.4 bits (324), Expect = 5.8e-27 Identity = 75/147 (51.02%), Postives = 98/147 (66.67%), Query Frame = 1
BLAST of CSPI01G15820 vs. NCBI nr
Match: gi|223538493|gb|EEF40098.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 126.7 bits (317), Expect = 3.8e-26 Identity = 78/153 (50.98%), Postives = 101/153 (66.01%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |