Cla97C01G010360 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G010360
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	DUF1685 family protein
Location	Cla97Chr01 : 15433664 .. 15434045 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGGGTGGGAAAGCAGAAGCCTTTTGGAGTTGGAATTTGAGGAGCTAAAGGGGTTTATGGATATGGGATTTGTTTTCTCAGAAGAAGATAAAGGTTCGAGCTTGGCGTCTATAGTTCCGGGATTGAACAGGCTACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGAAGTTGTATGGTGAAATTTCGAGGCCTTATCTTTCAGAAGCCTGGGAGGCTATGGAGGAACCAGAAGACGAGGAATTGAAGAAGCCATTGATGATGAAATGGAAGTTTTCTTCTAATCAGATTCATATGAAAGTTAATCTCAAATGGTGGGCTCATGCTGTTGCTTCAACTGTTAGATGA

mRNA sequence

ATGAGGGGGTGGGAAAGCAGAAGCCTTTTGGAGTTGGAATTTGAGGAGCTAAAGGGGTTTATGGATATGGGATTTGTTTTCTCAGAAGAAGATAAAGGCTACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGAAGTTGTATGGTGAAATTTCGAGGCCTTATCTTTCAGAAGCCTGGGAGGCTATGGAGGAACCAGAAGACGAGGAATTGAAGAAGCCATTGATGATGAAATGGAAGTTTTCTTCTAATCAGATTCATATGAAAGTTAATCTCAAATGGTGGGCTCATGCTGTTGCTTCAACTGTTAGATGA

Coding sequence (CDS)

ATGAGGGGGTGGGAAAGCAGAAGCCTTTTGGAGTTGGAATTTGAGGAGCTAAAGGGGTTTATGGATATGGGATTTGTTTTCTCAGAAGAAGATAAAGGCTACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGAAGTTGTATGGTGAAATTTCGAGGCCTTATCTTTCAGAAGCCTGGGAGGCTATGGAGGAACCAGAAGACGAGGAATTGAAGAAGCCATTGATGATGAAATGGAAGTTTTCTTCTAATCAGATTCATATGAAAGTTAATCTCAAATGGTGGGCTCATGCTGTTGCTTCAACTGTTAGATGA

Protein sequence

MRGWESRSLLELEFEELKGFMDMGFVFSEEDKGYEEEEEEEEEEEEEEEEEEEERKLYGEISRPYLSEAWEAMEEPEDEELKKPLMMKWKFSSNQIHMKVNLKWWAHAVASTVR

Homology

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BLAST of Cla97C01G010360 vs. NCBI nr
Match: XP_011648467.1 (PREDICTED: cyclin-dependent kinase 11B-like [Cucumis sativus] >KGN65040.1 hypothetical protein Csa_1G181530 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 1.3e-26
Identity = 80/122 (65.57%), Postives = 86/122 (70.49%), Query Frame = 0


Query: 2   RGWESRSLLELEFEELKGFMDMGFVFSEEDKG--XXXXXXXXXXXXXXXXXXXXXXXLYG 61
           RG E+RS LELEFEELKGFMD+GFVFSEEDKG                XXXXXXXX L G
Sbjct: 46  RGAENRSQLELEFEELKGFMDLGFVFSEEDKGSILASIVPGLNWLGKRXXXXXXXXKLCG 105

Query: 62  EISRPYLSEAWEAM-------EEPEDEELKKPLMMKWKFSSNQIHMKVNLKWWAHAVAST 115
           EISRPYLSEAWE M              LKKPLMMKW+F SN+IHMKVNLKWWAHAVAST
Sbjct: 106 EISRPYLSEAWETMXXXXXXXXXXXXXXLKKPLMMKWRFPSNEIHMKVNLKWWAHAVAST 165

[Close]

BLAST of Cla97C01G010360 vs. NCBI nr
Match: KGN65608.1 (hypothetical protein Csa_1G470240 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 1.7e-26
Identity = 92/125 (73.60%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 5   ESRSLLELEFEELKGFMDMGFVFSEEDKG-------------XXXXXXXXXXXXXXXXXX 64
           ESRSL ELEFEELKGFMD+GFVFSEEDKG                  XXXXXXXXXXXXX
Sbjct: 127 ESRSLSELEFEELKGFMDLGFVFSEEDKGSSLASIVPGLNRLGKREEXXXXXXXXXXXXX 186

Query: 65  XXXXXLYGEISRPYLSEAWEAMEEPEDEE--LKKPLMMKWKFSSNQIHMKVNLKWWAHAV 115
           XXXXXL GEISRPYLSEAWEA+ E E++E  LK+PLMMKW+F SNQI MK NLKWWAHAV
Sbjct: 187 XXXXXLGGEISRPYLSEAWEAIAEEEEKEELLKRPLMMKWRFPSNQIDMKDNLKWWAHAV 246

[Close]

BLAST of Cla97C01G010360 vs. NCBI nr
Match: XP_022927119.1 (uncharacterized protein LOC111434058 [Cucurbita moschata])

HSP 1 Score: 121.7 bits (304), Expect = 1.6e-24
Identity = 69/114 (60.53%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 1   MRGWESRSLLELEFEELKGFMDMGFVFSEEDKGXXXXXXXXXXXXXXXXXXXXXXXLYGE 60
           +RG ESRSL ELEFEE+KGFMD+GFVFSE DK                        L G 
Sbjct: 124 IRGSESRSLSELEFEEVKGFMDLGFVFSEGDKS-SSLAWIVPGLNRLGKRDEEEEELGGG 183

Query: 61  ISRPYLSEAWEAMEEPEDEELKKPLMMKWKFSSNQIHMKVNLKWWAHAVASTVR 115
           ISRPYLSEAW AME  E+EELKK L+MKW+  +N+I MK NLKWWAHAVASTVR
Sbjct: 184 ISRPYLSEAWAAME--EEEELKKALVMKWRLPANEIDMKDNLKWWAHAVASTVR 234

[Close]

BLAST of Cla97C01G010360 vs. NCBI nr
Match: XP_023520224.1 (uncharacterized protein LOC111783529 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 121.7 bits (304), Expect = 1.6e-24
Identity = 69/114 (60.53%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 1   MRGWESRSLLELEFEELKGFMDMGFVFSEEDKGXXXXXXXXXXXXXXXXXXXXXXXLYGE 60
           +RG ESRSL ELEFEE+KGFMD+GFVFSE DK                        L G 
Sbjct: 124 IRGSESRSLSELEFEEVKGFMDLGFVFSEGDKS-SSLAWIVPGLNRLGKRDEEEEELGGG 183

Query: 61  ISRPYLSEAWEAMEEPEDEELKKPLMMKWKFSSNQIHMKVNLKWWAHAVASTVR 115
           ISRPYLSEAW AME  E+EELKK L+MKW+  +N+I MK NLKWWAHAVASTVR
Sbjct: 184 ISRPYLSEAWAAME--EEEELKKALVMKWRLPANEIDMKDNLKWWAHAVASTVR 234

[Close]

BLAST of Cla97C01G010360 vs. NCBI nr
Match: XP_022954447.1 (uncharacterized protein LOC111456711 [Cucurbita moschata])

HSP 1 Score: 114.8 bits (286), Expect = 2.0e-22
Identity = 65/114 (57.02%), Postives = 72/114 (63.16%), Query Frame = 0


Query: 1   MRGWESRSLLELEFEELKGFMDMGFVFSEEDKGXXXXXXXXXXXXXXXXXXXXXXXLYGE 60
           M+  ES+SL ELEFEELKGFMDMGFVF+EEDK                        + GE
Sbjct: 146 MKWSESKSLSELEFEELKGFMDMGFVFTEEDK---DSSLAWIVPALNRGRKEGEEEMGGE 205

Query: 61  ISRPYLSEAWEAMEEPEDEELKKPLMMKWKFSSNQIHMKVNLKWWAHAVASTVR 115
           I RPYLSEAWEAM      EL+ PLM KW+F  N+  MK NLKWWAHAVASTVR
Sbjct: 206 ILRPYLSEAWEAM------ELRMPLMKKWRFPGNETDMKDNLKWWAHAVASTVR 250

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BLAST of Cla97C01G010360 vs. TrEMBL
Match: tr|A0A0A0LT30|A0A0A0LT30_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181530 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.7e-27
Identity = 80/122 (65.57%), Postives = 86/122 (70.49%), Query Frame = 0


Query: 2   RGWESRSLLELEFEELKGFMDMGFVFSEEDKG--XXXXXXXXXXXXXXXXXXXXXXXLYG 61
           RG E+RS LELEFEELKGFMD+GFVFSEEDKG                XXXXXXXX L G
Sbjct: 46  RGAENRSQLELEFEELKGFMDLGFVFSEEDKGSILASIVPGLNWLGKRXXXXXXXXKLCG 105

Query: 62  EISRPYLSEAWEAM-------EEPEDEELKKPLMMKWKFSSNQIHMKVNLKWWAHAVAST 115
           EISRPYLSEAWE M              LKKPLMMKW+F SN+IHMKVNLKWWAHAVAST
Sbjct: 106 EISRPYLSEAWETMXXXXXXXXXXXXXXLKKPLMMKWRFPSNEIHMKVNLKWWAHAVAST 165

[Close]

BLAST of Cla97C01G010360 vs. TrEMBL
Match: tr|A0A0A0LV26|A0A0A0LV26_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470240 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-26
Identity = 92/125 (73.60%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 5   ESRSLLELEFEELKGFMDMGFVFSEEDKG-------------XXXXXXXXXXXXXXXXXX 64
           ESRSL ELEFEELKGFMD+GFVFSEEDKG                  XXXXXXXXXXXXX
Sbjct: 127 ESRSLSELEFEELKGFMDLGFVFSEEDKGSSLASIVPGLNRLGKREEXXXXXXXXXXXXX 186

Query: 65  XXXXXLYGEISRPYLSEAWEAMEEPEDEE--LKKPLMMKWKFSSNQIHMKVNLKWWAHAV 115
           XXXXXL GEISRPYLSEAWEA+ E E++E  LK+PLMMKW+F SNQI MK NLKWWAHAV
Sbjct: 187 XXXXXLGGEISRPYLSEAWEAIAEEEEKEELLKRPLMMKWRFPSNQIDMKDNLKWWAHAV 246

[Close]

BLAST of Cla97C01G010360 vs. TrEMBL
Match: tr|A0A2P6Q4W2|A0A2P6Q4W2_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0011511 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-17
Identity = 61/115 (53.04%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 6   SRSLLELEFEELKGFMDMGFVFSEEDK----GXXXXXXXXXXXXXXXXXXXXXXXLYGEI 65
           S+SL +L+FEELKGFMD+GFVFSEEDK                                I
Sbjct: 127 SKSLTDLQFEELKGFMDLGFVFSEEDKDSNLASIIPGLKKLGKKDDGEVDEEAFDDESAI 186

Query: 66  SRPYLSEAWEAMEEPEDEELKKPLMMKWKFS--SNQIHMKVNLKWWAHAVASTVR 115
           SRPYLSEAWE ME+ + E  KKPL M W+F   SN+I MK NLKWWAH VASTVR
Sbjct: 187 SRPYLSEAWEVMEKRKKE--KKPL-MDWRFPSLSNEIDMKDNLKWWAHTVASTVR 238

[Close]

BLAST of Cla97C01G010360 vs. TrEMBL
Match: tr|A0A1S4DSH1|A0A1S4DSH1_CUCME (uncharacterized protein LOC103489359 OS=Cucumis melo OX=3656 GN=LOC103489359 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.2e-17
Identity = 57/110 (51.82%), Postives = 60/110 (54.55%), Query Frame = 0


Query: 5   ESRSLLELEFEELKGFMDMGFVFSEEDKGXXXXXXXXXXXXXXXXXXXXXXXLYGEISRP 64
           ESRSL ELEFEELKGFMD+GFVFSEEDKG                         G+    
Sbjct: 124 ESRSLSELEFEELKGFMDLGFVFSEEDKGSSLASIVPGLNR------------LGKXXXX 183

Query: 65  YLSEAWEAMEEPEDEELKKPLMMKWKFSSNQIHMKVNLKWWAHAVASTVR 115
                            KKPLMMKW+F SNQI MK NLKWWAHAVASTVR
Sbjct: 184 XXXXXXXXXXXXXXXXAKKPLMMKWRFPSNQIDMKDNLKWWAHAVASTVR 221

[Close]

BLAST of Cla97C01G010360 vs. TrEMBL
Match: tr|B9S8C1|B9S8C1_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1250530 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.2e-17
Identity = 59/118 (50.00%), Postives = 69/118 (58.47%), Query Frame = 0


Query: 6   SRSLLELEFEELKGFMDMGFVFSEEDKGXXXXXXXXXXXXXXXXXXXXXXXL-------Y 65
           S+SL ELEFEE+KGFMD+GFVFSEEDK                                 
Sbjct: 179 SKSLSELEFEEVKGFMDLGFVFSEEDKDSSLVSIIPGLQRLGNKDQEEEKKEEKNSAFDE 238

Query: 66  GEISRPYLSEAWEAMEEPEDEELKKPLMMKWKF--SSNQIHMKVNLKWWAHAVASTVR 115
           G +SRPYLSEAWEA++  + EE   PL M W+   S+N+I MK NLKWWAH VASTVR
Sbjct: 239 GAVSRPYLSEAWEALDNRKKEE---PL-MNWRIPASTNEIDMKYNLKWWAHTVASTVR 292

[Close]

BLAST of Cla97C01G010360 vs. TAIR10
Match: AT2G42760.1 (unknown protein)

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-10
Identity = 59/125 (47.20%), Postives = 81/125 (64.80%), Query Frame = 0


Query: 5   ESRSLLELEFEELKGFMDMGFVFSEEDKG-----------XXXXXXXXXXXXXXXXXXXX 64
           + +S+ +LE+EELKGFMD+GFVFSE+D                  XXXXXXXXXXXXXXX
Sbjct: 143 KGKSMSDLEYEELKGFMDLGFVFSEDDHKDSDLVSILPGLQRLVKXXXXXXXXXXXXXXX 202

Query: 65  XXXLYGEISRPYLSEAWEAMEEPEDEELKKPLMMKWKF----SSNQIHMKVNLKWWAHAV 115
           XXX     +RPYLSEAW+     + ++   P  +KW+     +++++ +K NL+ WAHAV
Sbjct: 203 XXXXXNRAARPYLSEAWDHCGGRKGKKQITP-EIKWRVPAPAAASEVDLKDNLRLWAHAV 262

The following BLAST results are available for this feature:

BLAST of Cla97C01G010360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648467.1	1.3e-26	65.57	PREDICTED: cyclin-dependent kinase 11B-like [Cucumis sativus] >KGN65040.1 hypoth...	[more]
KGN65608.1	1.7e-26	73.60	hypothetical protein Csa_1G470240 [Cucumis sativus]	[more]
XP_022927119.1	1.6e-24	60.53	uncharacterized protein LOC111434058 [Cucurbita moschata]	[more]
XP_023520224.1	1.6e-24	60.53	uncharacterized protein LOC111783529 [Cucurbita pepo subsp. pepo]	[more]
XP_022954447.1	2.0e-22	57.02	uncharacterized protein LOC111456711 [Cucurbita moschata]	[more]

BLAST of Cla97C01G010360 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT30\|A0A0A0LT30_CUCSA	8.7e-27	65.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181530 PE=4 SV=1	[more]
tr\|A0A0A0LV26\|A0A0A0LV26_CUCSA	1.1e-26	73.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470240 PE=4 SV=1	[more]
tr\|A0A2P6Q4W2\|A0A2P6Q4W2_ROSCH	1.6e-17	53.04	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0011511 PE=4...	[more]
tr\|A0A1S4DSH1\|A0A1S4DSH1_CUCME	6.2e-17	51.82	uncharacterized protein LOC103489359 OS=Cucumis melo OX=3656 GN=LOC103489359 PE=...	[more]
tr\|B9S8C1\|B9S8C1_RICCO	8.2e-17	50.00	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1250530 PE=4 SV=1	[more]

BLAST of Cla97C01G010360 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C01G010360 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42760.1	1.6e-10	47.20	unknown protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G010360.1	Cla97C01G010360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..58
None	No IPR available	PANTHER	PTHR31865	FAMILY NOT NAMED	coord: 5..114
None	No IPR available	PANTHER	PTHR31865:SF7	SUBFAMILY NOT NAMED	coord: 5..114

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G010360	Csa1G181530	Cucumber (Chinese Long) v2	cuwmbB009
Cla97C01G010360	MELO3C025547	Melon (DHL92) v3.5.1	mewmbB144
Cla97C01G010360	ClCG01G010570	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G010360	CSPI01G15820	Wild cucumber (PI 183967)	cpiwmbB009
Cla97C01G010360	Cucsa.180450	Cucumber (Gy14) v1	cgywmbB325
Cla97C01G010360	Lsi02G011210	Bottle gourd (USVL1VR-Ls)	lsiwmbB153
Cla97C01G010360	MELO3C025547.2	Melon (DHL92) v3.6.1	medwmbB126
Cla97C01G010360	Bhi08G000638	Wax gourd	wgowmbB460

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G010360	Watermelon (97103) v2	wmbwmbB000
Cla97C01G010360	Silver-seed gourd	carwmbB0050
Cla97C01G010360	Silver-seed gourd	carwmbB1097
Cla97C01G010360	Silver-seed gourd	carwmbB1098
Cla97C01G010360	Cucumber (Gy14) v2	cgybwmbB009
Cla97C01G010360	Cucumber (Gy14) v2	cgybwmbB396
Cla97C01G010360	Cucumber (Gy14) v1	cgywmbB018
Cla97C01G010360	Cucurbita maxima (Rimu)	cmawmbB210
Cla97C01G010360	Cucurbita maxima (Rimu)	cmawmbB394
Cla97C01G010360	Cucurbita moschata (Rifu)	cmowmbB200
Cla97C01G010360	Cucurbita moschata (Rifu)	cmowmbB194
Cla97C01G010360	Cucurbita moschata (Rifu)	cmowmbB384
Cla97C01G010360	Wild cucumber (PI 183967)	cpiwmbB436
Cla97C01G010360	Cucumber (Chinese Long) v3	cucwmbB008
Cla97C01G010360	Cucumber (Chinese Long) v3	cucwmbB432
Cla97C01G010360	Cucumber (Chinese Long) v3	cucwmbB533
Cla97C01G010360	Bottle gourd (USVL1VR-Ls)	lsiwmbB112
Cla97C01G010360	Watermelon (Charleston Gray)	wcgwmbB091
Cla97C01G010360	Watermelon (97103) v1	wmwmbB239