Lsi02G011210 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTTTGAGCAAGTTCTCAATCTCTTCGATTTATTCTGGTTCGAGCGTAAAATCTTCAACAAACACCCCTTTTTGAGCAAAGAAATCGTCGGAGCGGAGTCGAGGAGAAGGCCTAGAGGGAGAAGAATGAAGGGGTCGGAAAGTAGGAGTCTTTTGGAGCTGGAATTTGAGGAGCTAAAAGGGTTAATGGATTTAGGATTCGTTTTCTCCGAAGAGGATAAAGGTTCGAGCTTGGCATCGATAGTTCCGGGATTAAACAGGCTAGGAAAAAGAGAAGAAGAAGAAGAAAGAAAGTTGTGTGGTGAAATTTCGAGGCCTTATCTTTCAGAAGCTTGGGAGGCTATGGAGGAAGAAGAAGAGAAATTGGGGAAGCCATTGATGATGAAATGGAAGCTTCCTTATAATCAGATTCATATGAAAGTTAATCTCAAATGGTGGGCTCATGTTGTTGCTTCAACGGTTAGATGA ATGGACTTTGAGCAAGTTCTCAATCTCTTCGATTTATTCTGGTTCGAGCGTAAAATCTTCAACAAACACCCCTTTTTGAGCAAAGAAATCGTCGGAGCGGAGTCGAGGAGAAGGCCTAGAGGGAGAAGAATGAAGGGGTCGGAAAGTAGGAGTCTTTTGGAGCTGGAATTTGAGGAGCTAAAAGGGTTAATGGATTTAGGATTCGTTTTCTCCGAAGAGGATAAAGGTTCGAGCTTGGCATCGATAGTTCCGGGATTAAACAGGCTAGGAAAAAGAGAAGAAGAAGAAGAAAGAAAGTTGTGTGGTGAAATTTCGAGGCCTTATCTTTCAGAAGCTTGGGAGGCTATGGAGGAAGAAGAAGAGAAATTGGGGAAGCCATTGATGATGAAATGGAAGCTTCCTTATAATCAGATTCATATGAAAGTTAATCTCAAATGGTGGGCTCATGTTGTTGCTTCAACGGTTAGATGA ATGGACTTTGAGCAAGTTCTCAATCTCTTCGATTTATTCTGGTTCGAGCGTAAAATCTTCAACAAACACCCCTTTTTGAGCAAAGAAATCGTCGGAGCGGAGTCGAGGAGAAGGCCTAGAGGGAGAAGAATGAAGGGGTCGGAAAGTAGGAGTCTTTTGGAGCTGGAATTTGAGGAGCTAAAAGGGTTAATGGATTTAGGATTCGTTTTCTCCGAAGAGGATAAAGGTTCGAGCTTGGCATCGATAGTTCCGGGATTAAACAGGCTAGGAAAAAGAGAAGAAGAAGAAGAAAGAAAGTTGTGTGGTGAAATTTCGAGGCCTTATCTTTCAGAAGCTTGGGAGGCTATGGAGGAAGAAGAAGAGAAATTGGGGAAGCCATTGATGATGAAATGGAAGCTTCCTTATAATCAGATTCATATGAAAGTTAATCTCAAATGGTGGGCTCATGTTGTTGCTTCAACGGTTAGATGA MDFEQVLNLFDLFWFERKIFNKHPFLSKEIVGAESRRRPRGRRMKGSESRSLLELEFEELKGLMDLGFVFSEEDKGSSLASIVPGLNRLGKREEEEERKLCGEISRPYLSEAWEAMEEEEEKLGKPLMMKWKLPYNQIHMKVNLKWWAHVVASTVR
BLAST of Lsi02G011210 vs. TrEMBL
Match: A0A0A0LT30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181530 PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 2.7e-65 Identity = 130/165 (78.79%), Postives = 142/165 (86.06%), Query Frame = 1
BLAST of Lsi02G011210 vs. TrEMBL
Match: A0A0A0LV26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G470240 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 8.1e-46 Identity = 112/165 (67.88%), Postives = 117/165 (70.91%), Query Frame = 1
BLAST of Lsi02G011210 vs. TrEMBL
Match: A0A151R8R0_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_039809 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 3.1e-29 Identity = 76/116 (65.52%), Postives = 88/116 (75.86%), Query Frame = 1
BLAST of Lsi02G011210 vs. TrEMBL
Match: B9S8C1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1250530 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 4.0e-29 Identity = 78/144 (54.17%), Postives = 101/144 (70.14%), Query Frame = 1
BLAST of Lsi02G011210 vs. TrEMBL
Match: A0A151S6D8_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_027836 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 4.0e-29 Identity = 88/186 (47.31%), Postives = 110/186 (59.14%), Query Frame = 1
BLAST of Lsi02G011210 vs. TAIR10
Match: AT2G42760.1 (AT2G42760.1 unknown protein) HSP 1 Score: 97.4 bits (241), Expect = 8.1e-21 Identity = 59/138 (42.75%), Postives = 87/138 (63.04%), Query Frame = 1
BLAST of Lsi02G011210 vs. NCBI nr
Match: gi|778665020|ref|XP_011648467.1| (PREDICTED: cyclin-dependent kinase 11B-like [Cucumis sativus]) HSP 1 Score: 256.1 bits (653), Expect = 3.8e-65 Identity = 130/165 (78.79%), Postives = 142/165 (86.06%), Query Frame = 1
BLAST of Lsi02G011210 vs. NCBI nr
Match: gi|700210512|gb|KGN65608.1| (hypothetical protein Csa_1G470240 [Cucumis sativus]) HSP 1 Score: 191.4 bits (485), Expect = 1.2e-45 Identity = 112/165 (67.88%), Postives = 117/165 (70.91%), Query Frame = 1
BLAST of Lsi02G011210 vs. NCBI nr
Match: gi|1012327180|gb|KYP38917.1| (hypothetical protein KK1_039809 [Cajanus cajan]) HSP 1 Score: 136.3 bits (342), Expect = 4.4e-29 Identity = 76/116 (65.52%), Postives = 88/116 (75.86%), Query Frame = 1
BLAST of Lsi02G011210 vs. NCBI nr
Match: gi|223538493|gb|EEF40098.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 136.0 bits (341), Expect = 5.8e-29 Identity = 78/144 (54.17%), Postives = 101/144 (70.14%), Query Frame = 1
BLAST of Lsi02G011210 vs. NCBI nr
Match: gi|1012339124|gb|KYP50362.1| (hypothetical protein KK1_027836 [Cajanus cajan]) HSP 1 Score: 136.0 bits (341), Expect = 5.8e-29 Identity = 88/186 (47.31%), Postives = 110/186 (59.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |