MELO3C021397 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C021397
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRibosomal protein L34e superfamily protein
Locationchr11 : 26863758 .. 26865620 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCCGTCCTCAATTCTCTCGTCATCGTCGTCAATTTCCAAATCCAAGACTTCAACAAACCCTAGCCCTAGCAATTCCCTTCTCTGTAAACACTCTCCATCTGCAACCCTTGACCTTCTTATCCTCATTCTCGTTTTGTTTTCTGGTACTTTCCTTGTAACCTCATATTTCTCTTACATTTTCAACTCTTTGTCGATTCTCTTGTCGCATTCCGCCCCCCAGCTTCCTCAATTTCCCTTTACGTTTATTGCTGGATTTTTGTTGTTCTTTTGTTTCACTATTGGTGTGTTTGAGATTTGTTGTGGGGCTAGATCGAGGAAATGCGCTAAGCCGGGATGTAAAGGGTTGAAAAAAGCTATGGAGTTCGATCTGCAATTGCAAACGGAGGAGTGTGTGAAGAGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCCAATCCGGATTATGAGTGTTTGAGGTCTGAGCTGAGGAAGATGGCACCACCCAATGGCCGAGCTGTTCTGCTTTTCCGGGCGCGCTGTGGCTGCCCCATCGCGAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAAGTGAGTTCGTTTCTTATCTGTTTTTTGCTCTGATCGTTCCATGGCTTGAGCTCTTTCGTTGTCTGTTCTTAATTCTGGAATTGGGTTTTGCTCTTCTGAAATTATCACGATCCACTTCTCCCTAGCAAAACCCCAAAACTAAAAAGCAGATGATGAAGGAAAAGGGTGTATCTGGATTTAGATGTCATTTGTTTAAGTCCCTGTGGCATCCATGAAACCTTTGACGAACCGTAGTATCTAGCTTAGTTCGGAATTGGGGAGAAATTTCTTCCCCTATTTAACATTGTGGCTGGTAGATAATTTTTTATTAACAATTTTGTGGGAGGTGGGATTATGGAAGAGGAGGACTATCTTATTTCGGTTTGCTCAATCAGAAACTATTGTACATGTTCCCCATTGAATCATGTTGATTTTTCAAAAAAATAATAGTAATAAGTTGATTAGATCAACTTGGTTTACAGAGATAAGGTACATTTTTTCTGTTGAAACTAATTCTGCAGCTATCCTTGCATCTTGGAATCATAGTTGATACTGTTTCTTTTCTTGTACCTTTACCCCTTTCTTCATGGAATTGTAACCAAAGCCTCAAGACCCGAGACTTAAATTAGATGCTCAAAGTTTGATCAGTTACATTTTTCTTGTTGAAAATGATAGATGTTAAACTCCAAATAATGTGATCGATATGGGTAATGAAGGGATTTGAAGGTCTGGATTGAATTGGTTTAGATTTTTATTAGGCCTACTTGCTATGTTGTTTCTGAGCTCATTTGGTTAGTTCATACTATTTTCTCTTTTCCACTTTATGGCATCCCTTGAGCATGATGAATTCGCTTTGTGTGTCTAGTCTTGGGCAAATTGTAGAGTTTAGTTTAACTTACATTGCAGCGTGTTCATCCTGGTGCAATCTTTATCGTTAATATTTTTTTTTTTTGGTAGGTTTTATATCCATTAACATTAAGAATCTAAAATTACTACTCGGAAAGAAGATCCATGACTAGACATGGGTTTTTTTTTTTACTTCTTCTCGTTTGTTTCCCTGTGTGTATCTCTTGTTTGTCATTTATTGTTAATTAATATTATTTAGCATCTTGTTTCATGTTTTGATCTACTGAAGGGTTTACTTTCTCCCTTTCTTTTTACCCGTTTTAAATGTTGTAAATTCTCTTCATTCTTGGGTCCACTCTTCAAATTAGTTAATTTATTTTTCAGTGGGAAGCTATGCAAGCAAGTTTCAGGGGCTCGGTTAGCATACACTAAGTAATTT

mRNA sequence

ATGCCTCCGTCCTCAATTCTCTCGTCATCGTCGTCAATTTCCAAATCCAAGACTTCAACAAACCCTAGCCCTAGCAATTCCCTTCTCTGTAAACACTCTCCATCTGCAACCCTTGACCTTCTTATCCTCATTCTCGTTTTGTTTTCTGGTACTTTCCTTGTAACCTCATATTTCTCTTACATTTTCAACTCTTTGTCGATTCTCTTGTCGCATTCCGCCCCCCAGCTTCCTCAATTTCCCTTTACGTTTATTGCTGGATTTTTGTTGTTCTTTTGTTTCACTATTGGTGTGTTTGAGATTTGTTGTGGGGCTAGATCGAGGAAATGCGCTAAGCCGGGATGTAAAGGGTTGAAAAAAGCTATGGAGTTCGATCTGCAATTGCAAACGGAGGAGTGTGTGAAGAGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCCAATCCGGATTATGAGTGTTTGAGGTCTGAGCTGAGGAAGATGGCACCACCCAATGGCCGAGCTGTTCTGCTTTTCCGGGCGCGCTGTGGCTGCCCCATCGCGAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAATGGGAAGCTATGCAAGCAAGTTTCAGGGGCTCGGTTAGCATACACTAAGTAATTT

Coding sequence (CDS)

ATGCCTCCGTCCTCAATTCTCTCGTCATCGTCGTCAATTTCCAAATCCAAGACTTCAACAAACCCTAGCCCTAGCAATTCCCTTCTCTGTAAACACTCTCCATCTGCAACCCTTGACCTTCTTATCCTCATTCTCGTTTTGTTTTCTGGTACTTTCCTTGTAACCTCATATTTCTCTTACATTTTCAACTCTTTGTCGATTCTCTTGTCGCATTCCGCCCCCCAGCTTCCTCAATTTCCCTTTACGTTTATTGCTGGATTTTTGTTGTTCTTTTGTTTCACTATTGGTGTGTTTGAGATTTGTTGTGGGGCTAGATCGAGGAAATGCGCTAAGCCGGGATGTAAAGGGTTGAAAAAAGCTATGGAGTTCGATCTGCAATTGCAAACGGAGGAGTGTGTGAAGAGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCCAATCCGGATTATGAGTGTTTGAGGTCTGAGCTGAGGAAGATGGCACCACCCAATGGCCGAGCTGTTCTGCTTTTCCGGGCGCGCTGTGGCTGCCCCATCGCGAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAATGGGAAGCTATGCAAGCAAGTTTCAGGGGCTCGGTTAGCATACACTAAGTAA

Protein sequence

MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYTK*
Homology
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BLAST of MELO3C021397 vs. Swiss-Prot
Match: Y5902_ARATH (Uncharacterized protein At5g19025 OS=Arabidopsis thaliana GN=At5g19025 PE=2 SV=3)

HSP 1 Score: 260.8 bits (665), Expect = 1.4e-68
Identity = 138/235 (58.72%), Postives = 162/235 (68.94%), Query Frame = 1 

Query: 8   SSSSSISKSKTSTNPSPSNSL-LCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNSLS 67
           +S++    S+++ N + S+SL LCKHSPSATLDLLILILVLFSGTFL++SYFSY+ +SLS
Sbjct: 20  NSTTMPPSSRSAANQNSSSSLHLCKHSPSATLDLLILILVLFSGTFLLSSYFSYLIHSLS 79

Query: 68  ILLSH----------SAPQLPQF---------------------PFTFIAGFLLFFCFTI 127
           +L SH            P L  F                     P +F   F +FF  +I
Sbjct: 80  LLSSHFPSITISLSSLLPPLIIFFSSDHSTEDEDHHHPSGKIPPPASFFFAFAVFFAASI 139

Query: 128 GVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKSGS-KEIDKLPWKGGSEANPD 187
              ++CCG+RSRKC  P CKG+KKAMEFDLQLQTEECVKSGS KEID+LPWKGGSE+NPD
Sbjct: 140 AFLDLCCGSRSRKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEIDRLPWKGGSESNPD 199

Query: 188 YECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSG 210
           YECLR+ELRKMAP NGRAVL+FR++CGCPIAKLEGWG KR RRHK       V G
Sbjct: 200 YECLRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKKSPAKLAVKG 254

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BLAST of MELO3C021397 vs. TrEMBL
Match: A0A0A0KEK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G238650 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.2e-119
Identity = 214/216 (99.07%), Postives = 214/216 (99.07%), Query Frame = 1 

Query: 1   MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 60
           MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY
Sbjct: 11  MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 70

Query: 61  IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKGLKKA 120
           IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFC TIGVFEICCGARSRKCAKPGCKGLKKA
Sbjct: 71  IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKA 130

Query: 121 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 180
           MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC
Sbjct: 131 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 190

Query: 181 GCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYTK 217
           GCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAY K
Sbjct: 191 GCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYPK 226

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BLAST of MELO3C021397 vs. TrEMBL
Match: M5Y586_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011602mg PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 8.0e-84
Identity = 152/203 (74.88%), Postives = 171/203 (84.24%), Query Frame = 1 

Query: 1   MPPSSILSSSSSISKSKTSTNPSPSN----SLLCKHSPSATLDLLILILVLFSGTFLVTS 60
           MP S+  +SSSS +    S+NP+P+     +LLCKHSPSATLDLLILILVLFSGTFL+TS
Sbjct: 1   MPSSAAATSSSSPTPKPKSSNPNPNGNPNCTLLCKHSPSATLDLLILILVLFSGTFLITS 60

Query: 61  YFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKG 120
           YFSYIFNSLS+LLSHS+  L   P  ++ GF+ FF   + + E CCG RSRKC +PGCKG
Sbjct: 61  YFSYIFNSLSLLLSHSSIHLHHIPVPYVVGFVAFFAVALFIVEFCCGTRSRKCDRPGCKG 120

Query: 121 LKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLF 180
           LKKAMEFDLQLQTEECVK+GSK+IDKLPWKGGSE NPDYECLRSELRKMAPPNGRAVLLF
Sbjct: 121 LKKAMEFDLQLQTEECVKTGSKDIDKLPWKGGSEGNPDYECLRSELRKMAPPNGRAVLLF 180

Query: 181 RARCGCPIAKLEGWGTKRGRRHK 200
           RARCGCP+AKLEGWG KRGRRHK
Sbjct: 181 RARCGCPVAKLEGWGPKRGRRHK 203

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BLAST of MELO3C021397 vs. TrEMBL
Match: F6HDL0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02590 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.7e-76
Identity = 151/210 (71.90%), Postives = 165/210 (78.57%), Query Frame = 1 

Query: 7   LSSSSSISKSKTSTNPS--PSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNS 66
           ++SS S    K S NP+  P+ SLLCKHSPSATLD+LILILVLFSGTFL+TSYFSYI  S
Sbjct: 13  VTSSPSPKPRKPSMNPNANPNCSLLCKHSPSATLDILILILVLFSGTFLITSYFSYIVQS 72

Query: 67  LS-----ILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKGLKK 126
           LS     I+LSHS     + P  +I GFL+FF   I   E+CCG RSRKC  PGCKGLKK
Sbjct: 73  LSLILPSIILSHSL-SFRESPGPYILGFLVFFAVFIVTIELCCGYRSRKCDNPGCKGLKK 132

Query: 127 AMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRAR 186
           AMEFDLQLQTEEC+KS SKEID LPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRAR
Sbjct: 133 AMEFDLQLQTEECLKSSSKEIDVLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRAR 192

Query: 187 CGCPIAKLEGWGTKRGRRHKNGKLCKQVSG 210
           CGCPIAKLEGWG KRGRRHK       ++G
Sbjct: 193 CGCPIAKLEGWGPKRGRRHKKALASLALNG 221

[Close]
BLAST of MELO3C021397 vs. TrEMBL
Match: A5ADW3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036761 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.6e-76
Identity = 150/200 (75.00%), Postives = 162/200 (81.00%), Query Frame = 1 

Query: 7   LSSSSSISKSKTSTNPS--PSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNS 66
           ++SS S    K S NP+  P+ SLLCKHSPSATLD+LILILVLFSGTFL+TSYFSYI  S
Sbjct: 3   VTSSPSPKPRKPSMNPNANPNCSLLCKHSPSATLDILILILVLFSGTFLITSYFSYIVQS 62

Query: 67  LS-----ILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKGLKK 126
           LS     I+LSHS     + P  +I GFL+FF   I   E+CCG RSRKC  PGCKGLKK
Sbjct: 63  LSLILPSIILSHSL-SFRESPGPYILGFLVFFAVFIVTIELCCGYRSRKCDNPGCKGLKK 122

Query: 127 AMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRAR 186
           AMEFDLQLQTEEC+KS SKEID LPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRAR
Sbjct: 123 AMEFDLQLQTEECLKSSSKEIDVLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRAR 182

Query: 187 CGCPIAKLEGWGTKRGRRHK 200
           CGCPIAKLEGWG KRGRRHK
Sbjct: 183 CGCPIAKLEGWGPKRGRRHK 201

[Close]
BLAST of MELO3C021397 vs. TrEMBL
Match: A9PHB0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s03100g PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 6.1e-76
Identity = 144/204 (70.59%), Postives = 170/204 (83.33%), Query Frame = 1 

Query: 1   MPPSSILS----SSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTS 60
           MPPSS  +     SSS + + T++NP+ S SLLCKHSPSATLDLLILILVLFSGTFL+TS
Sbjct: 13  MPPSSSFTPKPHKSSSSNTANTNSNPN-STSLLCKHSPSATLDLLILILVLFSGTFLLTS 72

Query: 61  YFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKG 120
           YFSYIFNSLS+LLS+S+  L   PF++I GF   F  +I  FE CCG RSRKC +PGCKG
Sbjct: 73  YFSYIFNSLSLLLSNSSLSLHFPPFSYILGFFSLFILSILFFEFCCGPRSRKCHQPGCKG 132

Query: 121 LKKAMEFDLQLQTEECVKS-GSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLL 180
            KKA+EFDLQLQTE+C+KS  + ++DKLPWKGG+ +NPDYECLR+ELRKMAPPNGRAVLL
Sbjct: 133 FKKAIEFDLQLQTEDCLKSTAANDVDKLPWKGGTVSNPDYECLRAELRKMAPPNGRAVLL 192

Query: 181 FRARCGCPIAKLEGWGTKRGRRHK 200
           FR++CGCP+AKLEGWG KRGRRHK
Sbjct: 193 FRSKCGCPVAKLEGWGPKRGRRHK 215

[Close]
BLAST of MELO3C021397 vs. TAIR10
Match: AT3G06180.1 (AT3G06180.1 Ribosomal protein L34e superfamily protein)

HSP 1 Score: 278.5 bits (711), Expect = 3.5e-75
Identity = 141/215 (65.58%), Postives = 163/215 (75.81%), Query Frame = 1 

Query: 1   MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 60
           MPPSS  S+S S S   +S++ S S+  LCKHSPSATLDLLILILVLFSG FL++SYFSY
Sbjct: 18  MPPSS--SASRSASNHSSSSSSSSSSLHLCKHSPSATLDLLILILVLFSGAFLLSSYFSY 77

Query: 61  IFNSLSILLSHSAPQLPQF------------PFTFIAGFLLFFCFTIGVFEICCGARSRK 120
           +F+S S+L SH  P L               P ++   F +FF  +I   ++CCG RSRK
Sbjct: 78  LFHSFSLLSSHF-PSLSSLIFSDDEDLSSIPPASYFFAFAVFFAASIAFLDLCCGPRSRK 137

Query: 121 CAKPGCKGLKKAMEFDLQLQTEECVKSGS-KEIDKLPWKGGSEANPDYECLRSELRKMAP 180
           C  P CKGLKKAMEFDLQLQTEECVKSG+ KEID+LPWKGGSE+NPDYECLR+ELR+MAP
Sbjct: 138 CRNPKCKGLKKAMEFDLQLQTEECVKSGATKEIDRLPWKGGSESNPDYECLRAELRRMAP 197

Query: 181 PNGRAVLLFRARCGCPIAKLEGWGTKRGRRHKNGK 203
           PNGRAVLLFR+RCGCP+AKLEGWG KRGRRHK  +
Sbjct: 198 PNGRAVLLFRSRCGCPVAKLEGWGPKRGRRHKKSQ 229

[Close]
BLAST of MELO3C021397 vs. TAIR10
Match: AT5G19025.1 (AT5G19025.1 Ribosomal protein L34e superfamily protein)

HSP 1 Score: 260.8 bits (665), Expect = 7.7e-70
Identity = 138/235 (58.72%), Postives = 162/235 (68.94%), Query Frame = 1 

Query: 8   SSSSSISKSKTSTNPSPSNSL-LCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNSLS 67
           +S++    S+++ N + S+SL LCKHSPSATLDLLILILVLFSGTFL++SYFSY+ +SLS
Sbjct: 20  NSTTMPPSSRSAANQNSSSSLHLCKHSPSATLDLLILILVLFSGTFLLSSYFSYLIHSLS 79

Query: 68  ILLSH----------SAPQLPQF---------------------PFTFIAGFLLFFCFTI 127
           +L SH            P L  F                     P +F   F +FF  +I
Sbjct: 80  LLSSHFPSITISLSSLLPPLIIFFSSDHSTEDEDHHHPSGKIPPPASFFFAFAVFFAASI 139

Query: 128 GVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKSGS-KEIDKLPWKGGSEANPD 187
              ++CCG+RSRKC  P CKG+KKAMEFDLQLQTEECVKSGS KEID+LPWKGGSE+NPD
Sbjct: 140 AFLDLCCGSRSRKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEIDRLPWKGGSESNPD 199

Query: 188 YECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSG 210
           YECLR+ELRKMAP NGRAVL+FR++CGCPIAKLEGWG KR RRHK       V G
Sbjct: 200 YECLRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKKSPAKLAVKG 254

[Close]
BLAST of MELO3C021397 vs. TAIR10
Match: AT3G01170.1 (AT3G01170.1 Ribosomal protein L34e superfamily protein)

HSP 1 Score: 128.6 bits (322), Expect = 4.5e-30
Identity = 78/199 (39.20%), Postives = 115/199 (57.79%), Query Frame = 1 

Query: 8   SSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSYI------ 67
           S  S  +++K+S++P+ S   +C  S SA +D++ILI V+ +  FL   Y   I      
Sbjct: 23  SPKSRNTRNKSSSSPTCSKFPVCDGSQSAAIDVVILIAVITACGFLFFPYVKLITLKSIE 82

Query: 68  -FNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKGLKKA 127
            F+ LS+L+     ++ Q P  + +  L  FC  I  + +      ++C KP CKGL+KA
Sbjct: 83  VFSDLSLLVKQ---EILQNPIVYGSLALSIFCAAISTWLVILLCTMQRCGKPNCKGLRKA 142

Query: 128 MEFDLQLQTEECVKSGSKE--IDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRA 187
           +EFD+QL+TEECVKS S +  + +LP          +  L +EL+KMAPPNGRAVL+FRA
Sbjct: 143 VEFDIQLETEECVKSSSNKRGMFELP-------RVHHRELEAELKKMAPPNGRAVLVFRA 202

Query: 188 RCGCPIAKLEGWGTKRGRR 198
           RCGC + +L   G K+ +R
Sbjct: 203 RCGCSVRRLVVSGPKKQQR 211

[Close]
BLAST of MELO3C021397 vs. TAIR10
Match: AT5G15260.1 (AT5G15260.1 Ribosomal protein L34e superfamily protein)

HSP 1 Score: 121.7 bits (304), Expect = 5.5e-28
Identity = 81/199 (40.70%), Postives = 114/199 (57.29%), Query Frame = 1 

Query: 8   SSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSYI------ 67
           S +SS ++  +S++ S + S+ C  S SA +D++ILI V+ S  FL+  Y  +I      
Sbjct: 30  SRTSSSNRKSSSSSCSSNFSVCCDGSRSAAIDVVILIAVITSSGFLIFPYIKFITIKSVE 89

Query: 68  -FNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSR-KCAKPGCKGLKK 127
            F+ LS L+     + P  P  +    L   C  +  + I     SR +C KP CKGL+K
Sbjct: 90  IFSELSCLVKEEILRNPD-PIVYGLIALSISCTALSAWMIVILLCSRHRCGKPNCKGLRK 149

Query: 128 A-MEFDLQLQTEECVKSGS--KEIDKLPWKGGSEANPDYEC-LRSELRKMAPPNGRAVLL 187
           A  EFD+QL+TE+CVKS +  K + K   KG  E   D+   L +EL+KMAPPNGRAVL+
Sbjct: 150 ANAEFDIQLETEDCVKSSNSGKSVSK---KGLFELPRDHHRELEAELKKMAPPNGRAVLV 209

Query: 188 FRARCGCPIAKLEGWGTKR 195
           FRA+CGC + +LE  G K+
Sbjct: 210 FRAKCGCSVGRLEVPGPKK 224

[Close]
BLAST of MELO3C021397 vs. NCBI nr
Match: gi|659117340|ref|XP_008458549.1| (PREDICTED: uncharacterized protein At5g19025 isoform X1 [Cucumis melo])

HSP 1 Score: 442.2 bits (1136), Expect = 5.3e-121
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1 

Query: 1   MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 60
           MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY
Sbjct: 11  MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 70

Query: 61  IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKGLKKA 120
           IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKGLKKA
Sbjct: 71  IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKGLKKA 130

Query: 121 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 180
           MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC
Sbjct: 131 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 190

Query: 181 GCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYTK 217
           GCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYTK
Sbjct: 191 GCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYTK 226

[Close]
BLAST of MELO3C021397 vs. NCBI nr
Match: gi|778714189|ref|XP_011657202.1| (PREDICTED: uncharacterized protein At5g19025 isoform X1 [Cucumis sativus])

HSP 1 Score: 437.2 bits (1123), Expect = 1.7e-119
Identity = 214/216 (99.07%), Postives = 214/216 (99.07%), Query Frame = 1 

Query: 1   MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 60
           MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY
Sbjct: 11  MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 70

Query: 61  IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKGLKKA 120
           IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFC TIGVFEICCGARSRKCAKPGCKGLKKA
Sbjct: 71  IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKA 130

Query: 121 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 180
           MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC
Sbjct: 131 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 190

Query: 181 GCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYTK 217
           GCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAY K
Sbjct: 191 GCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYPK 226

[Close]
BLAST of MELO3C021397 vs. NCBI nr
Match: gi|659117342|ref|XP_008458550.1| (PREDICTED: uncharacterized protein At5g19025 isoform X2 [Cucumis melo])

HSP 1 Score: 410.2 bits (1053), Expect = 2.2e-111
Identity = 201/211 (95.26%), Postives = 203/211 (96.21%), Query Frame = 1 

Query: 1   MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 60
           MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY
Sbjct: 11  MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 70

Query: 61  IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKGLKKA 120
           IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKGLKKA
Sbjct: 71  IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKGLKKA 130

Query: 121 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 180
           MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC
Sbjct: 131 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 190

Query: 181 GCPIAKLEGWGTKRGRRHKNGKLCKQVSGAR 212
           GCPIAKLEGWGTKRGRRHK       ++G R
Sbjct: 191 GCPIAKLEGWGTKRGRRHKKALATLGLNGGR 221

[Close]
BLAST of MELO3C021397 vs. NCBI nr
Match: gi|778714192|ref|XP_011657203.1| (PREDICTED: uncharacterized protein At5g19025 isoform X2 [Cucumis sativus])

HSP 1 Score: 407.5 bits (1046), Expect = 1.4e-110
Identity = 200/211 (94.79%), Postives = 202/211 (95.73%), Query Frame = 1 

Query: 1   MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 60
           MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY
Sbjct: 11  MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 70

Query: 61  IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKGLKKA 120
           IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFC TIGVFEICCGARSRKCAKPGCKGLKKA
Sbjct: 71  IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKA 130

Query: 121 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 180
           MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC
Sbjct: 131 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 190

Query: 181 GCPIAKLEGWGTKRGRRHKNGKLCKQVSGAR 212
           GCPIAKLEGWGTKRGRRHK       ++G R
Sbjct: 191 GCPIAKLEGWGTKRGRRHKKALATLGLNGGR 221

[Close]
BLAST of MELO3C021397 vs. NCBI nr
Match: gi|596287815|ref|XP_007225836.1| (hypothetical protein PRUPE_ppa011602mg [Prunus persica])

HSP 1 Score: 318.2 bits (814), Expect = 1.1e-83
Identity = 152/203 (74.88%), Postives = 171/203 (84.24%), Query Frame = 1 

Query: 1   MPPSSILSSSSSISKSKTSTNPSPSN----SLLCKHSPSATLDLLILILVLFSGTFLVTS 60
           MP S+  +SSSS +    S+NP+P+     +LLCKHSPSATLDLLILILVLFSGTFL+TS
Sbjct: 1   MPSSAAATSSSSPTPKPKSSNPNPNGNPNCTLLCKHSPSATLDLLILILVLFSGTFLITS 60

Query: 61  YFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKG 120
           YFSYIFNSLS+LLSHS+  L   P  ++ GF+ FF   + + E CCG RSRKC +PGCKG
Sbjct: 61  YFSYIFNSLSLLLSHSSIHLHHIPVPYVVGFVAFFAVALFIVEFCCGTRSRKCDRPGCKG 120

Query: 121 LKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLF 180
           LKKAMEFDLQLQTEECVK+GSK+IDKLPWKGGSE NPDYECLRSELRKMAPPNGRAVLLF
Sbjct: 121 LKKAMEFDLQLQTEECVKTGSKDIDKLPWKGGSEGNPDYECLRSELRKMAPPNGRAVLLF 180

Query: 181 RARCGCPIAKLEGWGTKRGRRHK 200
           RARCGCP+AKLEGWG KRGRRHK
Sbjct: 181 RARCGCPVAKLEGWGPKRGRRHK 203

The following BLAST results are available for this feature:
BLAST of MELO3C021397 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y5902_ARATH1.4e-6858.72Uncharacterized protein At5g19025 OS=Arabidopsis thaliana GN=At5g19025 PE=2 SV=3[more]
BLAST of MELO3C021397 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEK4_CUCSA1.2e-11999.07Uncharacterized protein OS=Cucumis sativus GN=Csa_6G238650 PE=4 SV=1[more]
M5Y586_PRUPE8.0e-8474.88Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011602mg PE=4 SV=1[more]
F6HDL0_VITVI2.7e-7671.90Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02590 PE=4 SV=... [more]
A5ADW3_VITVI3.6e-7675.00Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036761 PE=4 SV=1[more]
A9PHB0_POPTR6.1e-7670.59Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s03100g PE=2 SV=1[more]
BLAST of MELO3C021397 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06180.13.5e-7565.58 Ribosomal protein L34e superfamily protein[more]
AT5G19025.17.7e-7058.72 Ribosomal protein L34e superfamily protein[more]
AT3G01170.14.5e-3039.20 Ribosomal protein L34e superfamily protein[more]
AT5G15260.15.5e-2840.70 Ribosomal protein L34e superfamily protein[more]
BLAST of MELO3C021397 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659117340|ref|XP_008458549.1|5.3e-121100.00PREDICTED: uncharacterized protein At5g19025 isoform X1 [Cucumis melo][more]
gi|778714189|ref|XP_011657202.1|1.7e-11999.07PREDICTED: uncharacterized protein At5g19025 isoform X1 [Cucumis sativus][more]
gi|659117342|ref|XP_008458550.1|2.2e-11195.26PREDICTED: uncharacterized protein At5g19025 isoform X2 [Cucumis melo][more]
gi|778714192|ref|XP_011657203.1|1.4e-11094.79PREDICTED: uncharacterized protein At5g19025 isoform X2 [Cucumis sativus][more]
gi|596287815|ref|XP_007225836.1|1.1e-8374.88hypothetical protein PRUPE_ppa011602mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008195Ribosomal_L34Ae
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021397T1MELO3C021397T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008195Ribosomal protein L34AePANTHERPTHR1075960S RIBOSOMAL PROTEIN L34coord: 1..199
score: 2.2E
NoneNo IPR availablePANTHERPTHR10759:SF3SUBFAMILY NOT NAMEDcoord: 1..199
score: 2.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C021397Csa6G238650Cucumber (Chinese Long) v2cumeB432
MELO3C021397Cla009369Watermelon (97103) v1mewmB141
MELO3C021397ClCG06G005760Watermelon (Charleston Gray)mewcgB124
MELO3C021397Cla97C06G115270Watermelon (97103) v2mewmbB128
MELO3C021397Bhi12G001594Wax gourdmewgoB100
MELO3C021397CSPI06G15610Wild cucumber (PI 183967)cpimeB425
MELO3C021397CmaCh17G002750Cucurbita maxima (Rimu)cmameB313
MELO3C021397CmaCh08G011730Cucurbita maxima (Rimu)cmameB816
MELO3C021397CmoCh17G002620Cucurbita moschata (Rifu)cmomeB306
MELO3C021397Cp4.1LG17g01280Cucurbita pepo (Zucchini)cpemeB289
MELO3C021397Cp4.1LG12g02300Cucurbita pepo (Zucchini)cpemeB112
MELO3C021397CsGy6G014890Cucumber (Gy14) v2cgybmeB389
MELO3C021397Carg15929Silver-seed gourdcarmeB0327
MELO3C021397Carg05456Silver-seed gourdcarmeB0067
MELO3C021397CsaV3_6G018540Cucumber (Chinese Long) v3cucmeB454
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C021397Cucumber (Gy14) v2cgybmeB149
MELO3C021397Silver-seed gourdcarmeB0227
MELO3C021397Silver-seed gourdcarmeB0609
MELO3C021397Cucumber (Chinese Long) v3cucmeB176
MELO3C021397Watermelon (97103) v2mewmbB123
MELO3C021397Wax gourdmewgoB105
MELO3C021397Melon (DHL92) v3.5.1memeB051
MELO3C021397Cucumber (Gy14) v1cgymeB430
MELO3C021397Cucurbita maxima (Rimu)cmameB215
MELO3C021397Cucurbita maxima (Rimu)cmameB747
MELO3C021397Cucurbita moschata (Rifu)cmomeB200
MELO3C021397Cucurbita moschata (Rifu)cmomeB738
MELO3C021397Cucurbita moschata (Rifu)cmomeB800
MELO3C021397Wild cucumber (PI 183967)cpimeB174
MELO3C021397Cucumber (Chinese Long) v2cumeB180
MELO3C021397Watermelon (Charleston Gray)mewcgB121
MELO3C021397Watermelon (97103) v1mewmB096
MELO3C021397Cucurbita pepo (Zucchini)cpemeB555
MELO3C021397Cucurbita pepo (Zucchini)cpemeB793
MELO3C021397Bottle gourd (USVL1VR-Ls)lsimeB017
MELO3C021397Bottle gourd (USVL1VR-Ls)lsimeB342