Carg15929 (gene) Silver-seed gourd

NameCarg15929
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRibosomal protein
LocationCucurbita_argyrosperma_scaffold_080 : 636806 .. 641717 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTCTCATAGTCCCCTTTTTACAGGAAGATCCCTAATTTTGCCCTAATTGTGAACTCCATTCATTCCAATCTCTAACTGGGCTTTCTATAGAACATGCGCAATCTTCTGGTTCCGACAACCGCCATGCCTCCGTCCTCAATTCTCACCTCATCGTCGTCAATTTCCAAATCCAAGACTTGTGCAAACCCTAGCCCTAGCAATTCCCTTCTCTGTAAACACTCTCCATCCGCAACCCTTGATCTTCTTATCCTCATTCTCGTTCTGTTTTCCGGTACCTTTCTTGTAACGTCATATTTCTCTTACATTTTCAACTCTCTTTCGATTCTCTTGTCGTATTCGGCCCTGCAGCTTCCTCAATTTCCGTTTCCGTTTATTGTTGGGTTTTTGTTGTTTTTCTGTGTGATTGTTGGTGTGTTTGAGATTTGTTGTGGCGCTAGATCGAGGAAATGCGCGAAGCCGGGATGTAAAGGGTTGAAGAAGGCTATGGAGTTTGATCTGCAATTGCAAACGGAGGAGTGTGTGAAGGGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCTAACCCGGATTATGAGTGCTTGAGGTCTGAGCTGAGGAAGATGGCACCACCCAATGGTCGAGCTATTTTGCTCTTTCGGGCGCGCTGTGGCTGCCCCATCGCGAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAAGTGAGTTCATCTTTTGTGCCATTGATCTTTTTTGGAATTGGTTTTTTGCTCTAATCATTTTTAAGGCTTGAATTCTTTGGCTCTCTTGTTTTTTGTTCTGGAATTGAGTTCTTTACTGCTGAAATTATCCCGATCTCCTCCTCCTCCTGAATAAAACTCTTAACACTAAAGAAAATTGATAAGGGAAAAGTCTGTATCTGAAATTAGATAACATTTGCTTAAGATATTTGTGGCATACATGAAACTTTTGACAAATTGAGGAGAAACGCCTTCCCTTTTCTGATATTGCGATTGTTAAATGGTCCTATGAGCAATTTCATGGAAGTGGGACTAAGGAAGAGCGAAGAGGAAGCATTTTTCTGATTCAGTTTGGTAAATCAATGCTTGTTCCTTTTCGTATATTGATTTCTCAAAAAGAACAAAAAAAAAGGGTTGAGTTGATCAATTTCCGTTGACAGGAATCAGGACTTTTAAGTACTTGCAGAGTGCATCACAGTTCTGAACTGAATTGTTAAAAGAAACTAGTCGTTTAGCTGTCTTAGCATCTTGGACTTGTAACTGATACTGCCAAGTTTTCAACATGTGTGTATCCATACCTATTTCTTCATGGAATTCCAACTAAATCCACAGGATCTGAGACTCTAGGTAGATGTTCAAAGTTCAATCATTTATCTTTTTCGGTTGAAAAATTAACCGATGCTGAACTCTGAAATATGTGTTCGTGTAGATTTTGTGAGGGATTTGTAGGTTTGGATTGAATTGATTTACATGTTGGCAAGTTTTTGTTACCCTGTTTTGTTTCTGAGCTTGTATGTATGTTCATACAGTTCTCATTTGGTGTAGTACTTGCATTTCTTTTATTCTTCTCCTTATTGACATCTATGAGGAGATGAATTTTGCCTTGTCTGGTTGACTAGGACAAATTGTAGAGTTTATAGACACTTTCCCTTGATTTATTGAAGATGTTTATCTTTTTACCCATTTAAAATGACATAAGTTCTCCTAAATCTTGGGTCCACTCTTCAAGTTAGTTAATTTATTTTTTAGTGGGAAGCTATGCAAGAAAGTTTCGGGGGCTCGGTTAGCATACCCCAAGTAATTTGTTTCTGGTGAGCGATTATTGCTCGGTTGAAGCACTGATGTTCTCGTAGTTGCTAAGTAACTAAATTTATGCGTACATGGTGTCCAGCTCTAGTTGGTGCTTATATTGCTAACTTTATCTGATTTCCTTTTTTTTGGTTTAATTTACAGTCATATGCGTGATTTTTGTTTTAATTGAACCCTTGCACTGCCATTAGGTTAATTTATTATTTGCACTTTCAACTTTGGTTCGTTTTGGACCTTTGCACTTCCAAAATGTCAATTTTCATTTTATACTTTCAAGTTTTATACTTCAAAAGAATCTCCTATACTTTTAAAAGTGACCATTTTGGTGTCTATAGACAAAATTCTAAGACCAATGAAACCCATTTATACAAAGTTATTGTGAGATCCCACATCGGTTGGAGAGGGAAACGAAGCCTTCCTTATAAGGGTATGGAAACCTCTCCCTAGTAGACACATTTTAAAACCTTGAGGGGAACTTGGAAGTAAAAACCCATAGAGGACGATATCTGCTAGCGTTGGGCTTGGATTGTTACAAATGGTATCAGAGCCATACACCTGGCGGTGTGCCAGCAAGGACGCTAGGTCCTTAAGGGGGGGTGGATTGTGAGATCCCACAGAGGAGAGGGGAACGAACCTTTTAAGGGTGTGAAAACCTCTCTCTTGTAGATATGTTTTAAAACCGTGAGGCTGACAGCGATACGTAACAGGCCAAAATGGACAATATCTGCTAGCAGTGGCATGGGCTGTTAACCGGTTCATTTCAAGAAAGTTATGAAGTGTAGGATAGTGCTAAAATTTTAAGAAAAATGAAAATGAGGGGACCAAAACACTTTTTTCCAATGTATAGAGAACAAAACAAATGTTTTAAAAGTACAAGGATTAATATGGACAAAAACTGAAAATACAGGATCATAATGGACAGCTTGAAAGTGTAAGGACCAAAATGAACAAAAGTTAAAATGACATAATTAAGACAGTATTTCAACCTATTTCTTAAACCTATCTGAGAGAGTATATTGGTTTTTATCTTTTTACAAGAAACTGAAACATTTTCAGAAAGAAACAAATGAAATTATGGATAAAAAACCAAGAGAATAGCCTAGGGTCCAGGTGAAAACACCCCAGCCAGATGGACTGTAAAAGAACAGCCCCTTTTTATCGCTAAAAGCCATGGAGAGGGTATAATTACAAAAGAATTTCCTATGAGAGCACCATCCTGAGGATGTTATCCTGACAAAATCGTCTATCCTTCAAATATCCTTTGGTTTCTCTCCTACCGTATAACTCAAGAATCATCTATCCTTCAAAGGCAACTCAAGCATTGTCTTTGAACCTCCAACCTGATCAGACTTCCTAAGGCTAATCACGTTATGATGCTATAGCCTTATTTTGTTTCTTCGAAGACCGTACAAACGGTGAAGATTTTTGTGTTTGTATGTGGTCAAATAATCAACCATTTGCACAAAACAGCTCTTCATTGGTCATTATGCACTTATCCTACTTGGTTAGCTTAATGTGAGATCCCACCTCGACTGGAGAGGAGAATGAAGCATTTCTTATAAGGGTGTGGAAACCTCTCTCTAGCAGATGTGCAAAACCTTGATGGGAAGCCCAAAAGGAATAGTCCAAAGAGAACAACATTGGCTAGCGGTGGGATTGGACTGTTACAACTTCTTTGCATGAAAAATGTATGATCAAGTCGAGTTGTGTCATATGTTGTCTCATAGCAATTTTTTTCACTGTTCTATATATGCATGTAGCCTTTCTTTCCCAGAAACCTAATTGTGATAATCTAGTTATATAGCAGTATTTCTTACACTTTACAAGTGACATGACCTCCATCCTACTTTACTTCCCTGATTTCAGTTTCACAAAAGATGTGGAAGCATGAAGATCGATTTGGAACTTTTATCCTAAAATCCTGTTTACCTCTTGTGGGCAAAGGGATTGGGAATTCAATGCATCCCGATTCCTGGTACACTACTTTCTAGCAAGTAGTGACCAATGACCGTAGATTAGTCACATTCATCTCGGTTTTGTACCAATACTTTACCACGAGCTCGCATCGAGCTATAGAAAACCCAAACCTATATCAATTTCCATTTAAAGTTAAATCAGTTCTAAGTTCTTGGCTTCATAAAACAAGTGATAGAGATTTCTTTTGTCCTTGTCTAAGTTGCGTGCACGACCTAAATTTCAAACATACGTAGGGTAAATGCAGAATTTAAGAATGGCTTCCCTAATTGTCAGTGTCTGATGATATATATATAGAGAGATGAGTTCTGCATAATTGAAACCTCTTGGAATATACTGGATAGGACATCTAACATTAGAACTGGTTTACATGTTCTCACTGATGAACAATCTCATTCACATGTTTTCTACCCTGTGATTTGCATTATGAATTCCGTATGGTTAATTTTAGACGAGATTAGTAATCTTCAATGCCATTTTCTGCAGGGCTCTGGCTACATTGGGCATTAACGGGGGAGGAGGCCATCGCTGATCATCGATGGCGACTTCATTATCGAGAAGACCTTCCATATAACTTACTTTCTCTTTCCATCATTTTACTTATTTTTAGATGCTCTTTCTGAAACATATGGATTATTAGAGCTTTCTTTTATAAGAATTCTATAACATAGTGATATTCATTTTCAGAAACAGGCTTCCCCCATCCCTGCATTAGCCTGGGGAGACCCTCCCTCTCCCTCGCCCATGGAAATTGAAATATATACCAAAACTTACTGCAAATAAAACGATAGACAAAGATAATTATGTCTCATGGTCCATCTTGCGAGTATTTTTAGTACTGGAGTCCATTTAGCATAAGCCTTTCTATATATTATTTCTAAATCTGGGTTTGAGTCCAATACTTTCATCCTTAATATCTTGATCAATATGTATGTCAGATGTGAACGTCTTACCGACGGCAGCTTGTTGTTTGATCCGTATTCTAAGCTGGATTCTGTATGTTGTAACATTATGTTATTTGGGTATGAAGAACTTCGCGAATTGGACAAGCCCGCCTGTTCTTCGACAAAATGCCTGACAGAGGTTGCGTCTCTTACACCACCTTGA

mRNA sequence

TTCTCTCATAGTCCCCTTTTTACAGGAAGATCCCTAATTTTGCCCTAATTGTGAACTCCATTCATTCCAATCTCTAACTGGGCTTTCTATAGAACATGCGCAATCTTCTGGTTCCGACAACCGCCATGCCTCCGTCCTCAATTCTCACCTCATCGTCGTCAATTTCCAAATCCAAGACTTGTGCAAACCCTAGCCCTAGCAATTCCCTTCTCTGTAAACACTCTCCATCCGCAACCCTTGATCTTCTTATCCTCATTCTCGTTCTGTTTTCCGGTACCTTTCTTGTAACGTCATATTTCTCTTACATTTTCAACTCTCTTTCGATTCTCTTGTCGTATTCGGCCCTGCAGCTTCCTCAATTTCCGTTTCCGTTTATTGTTGGGTTTTTGTTGTTTTTCTGTGTGATTGTTGGTGTGTTTGAGATTTGTTGTGGCGCTAGATCGAGGAAATGCGCGAAGCCGGGATGTAAAGGGTTGAAGAAGGCTATGGAGTTTGATCTGCAATTGCAAACGGAGGAGTGTGTGAAGGGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCTAACCCGGATTATGAGTGCTTGAGGTCTGAGCTGAGGAAGATGGCACCACCCAATGGTCGAGCTATTTTGCTCTTTCGGGCGCGCTGTGGCTGCCCCATCGCGAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAAATGTGAACGTCTTACCGACGGCAGCTTGTTGTTTGATCCGTATTCTAAGCTGGATTCTGTATGTTGTAACATTATGTTATTTGGGTATGAAGAACTTCGCGAATTGGACAAGCCCGCCTGTTCTTCGACAAAATGCCTGACAGAGGTTGCGTCTCTTACACCACCTTGA

Coding sequence (CDS)

ATGCGCAATCTTCTGGTTCCGACAACCGCCATGCCTCCGTCCTCAATTCTCACCTCATCGTCGTCAATTTCCAAATCCAAGACTTGTGCAAACCCTAGCCCTAGCAATTCCCTTCTCTGTAAACACTCTCCATCCGCAACCCTTGATCTTCTTATCCTCATTCTCGTTCTGTTTTCCGGTACCTTTCTTGTAACGTCATATTTCTCTTACATTTTCAACTCTCTTTCGATTCTCTTGTCGTATTCGGCCCTGCAGCTTCCTCAATTTCCGTTTCCGTTTATTGTTGGGTTTTTGTTGTTTTTCTGTGTGATTGTTGGTGTGTTTGAGATTTGTTGTGGCGCTAGATCGAGGAAATGCGCGAAGCCGGGATGTAAAGGGTTGAAGAAGGCTATGGAGTTTGATCTGCAATTGCAAACGGAGGAGTGTGTGAAGGGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCTAACCCGGATTATGAGTGCTTGAGGTCTGAGCTGAGGAAGATGGCACCACCCAATGGTCGAGCTATTTTGCTCTTTCGGGCGCGCTGTGGCTGCCCCATCGCGAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAAATGTGAACGTCTTACCGACGGCAGCTTGTTGTTTGATCCGTATTCTAAGCTGGATTCTGTATGTTGTAACATTATGTTATTTGGGTATGAAGAACTTCGCGAATTGGACAAGCCCGCCTGTTCTTCGACAAAATGCCTGACAGAGGTTGCGTCTCTTACACCACCTTGA

Protein sequence

MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAILLFRARCGCPIAKLEGWGTKRGRRHKKCERLTDGSLLFDPYSKLDSVCCNIMLFGYEELRELDKPACSSTKCLTEVASLTPP
BLAST of Carg15929 vs. NCBI nr
Match: XP_023513614.1 (uncharacterized protein At5g19025-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414.5 bits (1064), Expect = 2.8e-112
Identity = 211/224 (94.20%), Postives = 216/224 (96.43%), Query Frame = 0

Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAILLFRARCGCPIAKLEGWGTKRGRRHKK---CERLTDGSLLF 222
           RAILLFRARCGCPIAKLEGWGTKRGRRHK    C++++   L +
Sbjct: 181 RAILLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKKVSGARLAY 224

BLAST of Carg15929 vs. NCBI nr
Match: XP_022930275.1 (uncharacterized protein At5g19025-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 414.1 bits (1063), Expect = 3.6e-112
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0

Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAILLFRARCGCPIAKLEGWGTKRGRRHKK 211
           RAILLFRARCGCPIAKLEGWGTKRGRRHKK
Sbjct: 181 RAILLFRARCGCPIAKLEGWGTKRGRRHKK 210

BLAST of Carg15929 vs. NCBI nr
Match: XP_023513615.1 (uncharacterized protein At5g19025-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414.1 bits (1063), Expect = 3.6e-112
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0

Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAILLFRARCGCPIAKLEGWGTKRGRRHKK 211
           RAILLFRARCGCPIAKLEGWGTKRGRRHKK
Sbjct: 181 RAILLFRARCGCPIAKLEGWGTKRGRRHKK 210

BLAST of Carg15929 vs. NCBI nr
Match: XP_022930274.1 (uncharacterized protein At5g19025-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 413.7 bits (1062), Expect = 4.8e-112
Identity = 211/224 (94.20%), Postives = 216/224 (96.43%), Query Frame = 0

Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAILLFRARCGCPIAKLEGWGTKRGRRHKK---CERLTDGSLLF 222
           RAILLFRARCGCPIAKLEGWGTKRGRRHK    C++++   L +
Sbjct: 181 RAILLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKKVSGAWLAY 224

BLAST of Carg15929 vs. NCBI nr
Match: XP_022999809.1 (uncharacterized protein At5g19025-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 412.1 bits (1058), Expect = 1.4e-111
Identity = 210/224 (93.75%), Postives = 215/224 (95.98%), Query Frame = 0

Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA 120
           TFLV SYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA
Sbjct: 61  TFLVKSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAILLFRARCGCPIAKLEGWGTKRGRRHKK---CERLTDGSLLF 222
           RAILLFRARCGCPIAKLEGWGTKRGRRHK    C++++   L +
Sbjct: 181 RAILLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKKVSGARLAY 224

BLAST of Carg15929 vs. TAIR10
Match: AT3G06180.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 251.1 bits (640), Expect = 7.4e-67
Identity = 127/188 (67.55%), Postives = 149/188 (79.26%), Query Frame = 0

Query: 39  LCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNSLSILLSY----SAL---------Q 98
           LCKHSPSATLDLLILILVLFSG FL++SYFSY+F+S S+L S+    S+L          
Sbjct: 44  LCKHSPSATLDLLILILVLFSGAFLLSSYFSYLFHSFSLLSSHFPSLSSLIFSDDEDLSS 103

Query: 99  LPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVK- 158
           +P  P  +   F +FF   +   ++CCG RSRKC  P CKGLKKAMEFDLQLQTEECVK 
Sbjct: 104 IP--PASYFFAFAVFFAASIAFLDLCCGPRSRKCRNPKCKGLKKAMEFDLQLQTEECVKS 163

Query: 159 GGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAILLFRARCGCPIAKLEGWGTKR 213
           G +KEID+LPWKGGSE+NPDYECLR+ELR+MAPPNGRA+LLFR+RCGCP+AKLEGWG KR
Sbjct: 164 GATKEIDRLPWKGGSESNPDYECLRAELRRMAPPNGRAVLLFRSRCGCPVAKLEGWGPKR 223

BLAST of Carg15929 vs. TAIR10
Match: AT5G19025.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 224.2 bits (570), Expect = 9.7e-59
Identity = 123/213 (57.75%), Postives = 141/213 (66.20%), Query Frame = 0

Query: 39  LCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFL 98
           LCKHSPSATLDLLILILVLFSGTFL++SYFSY+ +SLS+L S+         FP I   L
Sbjct: 42  LCKHSPSATLDLLILILVLFSGTFLLSSYFSYLIHSLSLLSSH---------FPSITISL 101

Query: 99  ----------------------------------------LFFCVIVGVFEICCGARSRK 158
                                                         +   ++CCG+RSRK
Sbjct: 102 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIAFLDLCCGSRSRK 161

Query: 159 CAKPGCKGLKKAMEFDLQLQTEECVKGGS-KEIDKLPWKGGSEANPDYECLRSELRKMAP 211
           C  P CKG+KKAMEFDLQLQTEECVK GS KEID+LPWKGGSE+NPDYECLR+ELRKMAP
Sbjct: 162 CRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEIDRLPWKGGSESNPDYECLRAELRKMAP 221

BLAST of Carg15929 vs. TAIR10
Match: AT3G01170.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 112.1 bits (279), Expect = 5.4e-25
Identity = 75/198 (37.88%), Postives = 113/198 (57.07%), Query Frame = 0

Query: 24  SKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSYI-------FNSLS 83
           +++K+ ++P+ S   +C  S SA +D++ILI V+ +  FL   Y   I       F+ LS
Sbjct: 29  TRNKSSSSPTCSKFPVCDGSQSAAIDVVILIAVITACGFLFFPYVKLITLKSIEVFSDLS 88

Query: 84  ILLSYSALQLPQFPFPFIVGFLL--FFCVIVGVFEICCGARSRKCAKPGCKGLKKAMEFD 143
           +L+    LQ      P + G L    FC  +  + +      ++C KP CKGL+KA+EFD
Sbjct: 89  LLVKQEILQ-----NPIVYGSLALSIFCAAISTWLVILLCTMQRCGKPNCKGLRKAVEFD 148

Query: 144 LQLQTEECVKGGSKE--IDKLPWKGGSEANPDYECLRSELRKMAPPNGRAILLFRARCGC 203
           +QL+TEECVK  S +  + +LP          +  L +EL+KMAPPNGRA+L+FRARCGC
Sbjct: 149 IQLETEECVKSSSNKRGMFELP-------RVHHRELEAELKKMAPPNGRAVLVFRARCGC 208

Query: 204 PIAKLEGWGTKRGRRHKK 211
            + +L   G K+ +R  K
Sbjct: 209 SVRRLVVSGPKKQQRKIK 214

BLAST of Carg15929 vs. TAIR10
Match: AT5G15260.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 92.0 bits (227), Expect = 5.7e-19
Identity = 65/157 (41.40%), Postives = 89/157 (56.69%), Query Frame = 0

Query: 62  FLVTSYFSY-------IFNSLSILLSYSALQLPQFPFPFIVGF--LLFFCVIVGVFEICC 121
           FL+  Y  +       IF+ LS L+    L+ P    P + G   L   C  +  + I  
Sbjct: 74  FLIFPYIKFITIKSVEIFSELSCLVKEEILRNPD---PIVYGLIALSISCTALSAWMIVI 133

Query: 122 GARSR-KCAKPGCKGLKKA-MEFDLQLQTEECVKGGS--KEIDKLPWKGGSEANPDYEC- 181
              SR +C KP CKGL+KA  EFD+QL+TE+CVK  +  K + K   KG  E   D+   
Sbjct: 134 LLCSRHRCGKPNCKGLRKANAEFDIQLETEDCVKSSNSGKSVSK---KGLFELPRDHHRE 193

Query: 182 LRSELRKMAPPNGRAILLFRARCGCPIAKLEGWGTKR 205
           L +EL+KMAPPNGRA+L+FRA+CGC + +LE  G K+
Sbjct: 194 LEAELKKMAPPNGRAVLVFRAKCGCSVGRLEVPGPKK 224

BLAST of Carg15929 vs. Swiss-Prot
Match: sp|P0C8Q9|Y5902_ARATH (Uncharacterized protein At5g19025 OS=Arabidopsis thaliana OX=3702 GN=At5g19025 PE=2 SV=3)

HSP 1 Score: 224.2 bits (570), Expect = 1.7e-57
Identity = 123/213 (57.75%), Postives = 141/213 (66.20%), Query Frame = 0

Query: 39  LCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFL 98
           LCKHSPSATLDLLILILVLFSGTFL++SYFSY+ +SLS+L S+         FP I   L
Sbjct: 42  LCKHSPSATLDLLILILVLFSGTFLLSSYFSYLIHSLSLLSSH---------FPSITISL 101

Query: 99  ----------------------------------------LFFCVIVGVFEICCGARSRK 158
                                                         +   ++CCG+RSRK
Sbjct: 102 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIAFLDLCCGSRSRK 161

Query: 159 CAKPGCKGLKKAMEFDLQLQTEECVKGGS-KEIDKLPWKGGSEANPDYECLRSELRKMAP 211
           C  P CKG+KKAMEFDLQLQTEECVK GS KEID+LPWKGGSE+NPDYECLR+ELRKMAP
Sbjct: 162 CRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEIDRLPWKGGSESNPDYECLRAELRKMAP 221

BLAST of Carg15929 vs. TrEMBL
Match: tr|A0A0A0KEK4|A0A0A0KEK4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G238650 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.3e-81
Identity = 164/224 (73.21%), Postives = 173/224 (77.23%), Query Frame = 0

Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSIL+S                                      FSG
Sbjct: 1   MRNLLVPTTAMPPSSILSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLS+SA QLPQFPF FI GFLLFFCV +GVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVK GSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAILLFRARCGCPIAKLEGWGTKRGRRHKK---CERLTDGSLLF 222
           RA+LLFRARCGCPIAKLEGWGTKRGRRHK    C++++   L +
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAY 224

BLAST of Carg15929 vs. TrEMBL
Match: tr|A0A1S3C841|A0A1S3C841_CUCME (uncharacterized protein At5g19025 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497920 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 4.9e-81
Identity = 163/224 (72.77%), Postives = 172/224 (76.79%), Query Frame = 0

Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSIL+S                                      FSG
Sbjct: 1   MRNLLVPTTAMPPSSILSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLS+SA QLPQFPF FI GFLLFFC  +GVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVK GSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAILLFRARCGCPIAKLEGWGTKRGRRHKK---CERLTDGSLLF 222
           RA+LLFRARCGCPIAKLEGWGTKRGRRHK    C++++   L +
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAY 224

BLAST of Carg15929 vs. TrEMBL
Match: tr|A0A1S3C8P6|A0A1S3C8P6_CUCME (uncharacterized protein At5g19025 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497920 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 4.9e-81
Identity = 162/210 (77.14%), Postives = 166/210 (79.05%), Query Frame = 0

Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSIL+S                                      FSG
Sbjct: 1   MRNLLVPTTAMPPSSILSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLS+SA QLPQFPF FI GFLLFFC  +GVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVK GSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAILLFRARCGCPIAKLEGWGTKRGRRHKK 211
           RA+LLFRARCGCPIAKLEGWGTKRGRRHKK
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKK 210

BLAST of Carg15929 vs. TrEMBL
Match: tr|A0A0D2UU87|A0A0D2UU87_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G170000 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.9e-70
Identity = 137/177 (77.40%), Postives = 152/177 (85.88%), Query Frame = 0

Query: 38  LLCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNSLSILLS-YSALQLPQFPFPFI-- 97
           LLCKHSPSATLDLLILILVLFSGTFL++SYFSY+F+SLS+LLS   + Q   F  PF+  
Sbjct: 49  LLCKHSPSATLDLLILILVLFSGTFLLSSYFSYLFHSLSLLLSPLLSTQSASFSLPFVSY 108

Query: 98  -VGFLLFFCVIVGVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKL 157
            +G  LFF   +   E CCG+RSRKC KPGCKGLKKA+EFDLQLQTE+CVK GSKEID+L
Sbjct: 109 LLGCTLFFVTTLISIEFCCGSRSRKCEKPGCKGLKKALEFDLQLQTEDCVKNGSKEIDRL 168

Query: 158 PWKGGSEANPDYECLRSELRKMAPPNGRAILLFRARCGCPIAKLEGWGTKRGRRHKK 211
           PWKGGSE NPDYECLR+ELRKMAPPNGRA+LLFRARCGCPIAKLEGWG KRGRRHKK
Sbjct: 169 PWKGGSEGNPDYECLRAELRKMAPPNGRAVLLFRARCGCPIAKLEGWGPKRGRRHKK 225

BLAST of Carg15929 vs. TrEMBL
Match: tr|A0A0D2T992|A0A0D2T992_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G170000 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.9e-70
Identity = 137/177 (77.40%), Postives = 152/177 (85.88%), Query Frame = 0

Query: 38  LLCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNSLSILLS-YSALQLPQFPFPFI-- 97
           LLCKHSPSATLDLLILILVLFSGTFL++SYFSY+F+SLS+LLS   + Q   F  PF+  
Sbjct: 49  LLCKHSPSATLDLLILILVLFSGTFLLSSYFSYLFHSLSLLLSPLLSTQSASFSLPFVSY 108

Query: 98  -VGFLLFFCVIVGVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKL 157
            +G  LFF   +   E CCG+RSRKC KPGCKGLKKA+EFDLQLQTE+CVK GSKEID+L
Sbjct: 109 LLGCTLFFVTTLISIEFCCGSRSRKCEKPGCKGLKKALEFDLQLQTEDCVKNGSKEIDRL 168

Query: 158 PWKGGSEANPDYECLRSELRKMAPPNGRAILLFRARCGCPIAKLEGWGTKRGRRHKK 211
           PWKGGSE NPDYECLR+ELRKMAPPNGRA+LLFRARCGCPIAKLEGWG KRGRRHKK
Sbjct: 169 PWKGGSEGNPDYECLRAELRKMAPPNGRAVLLFRARCGCPIAKLEGWGPKRGRRHKK 225

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023513614.12.8e-11294.20uncharacterized protein At5g19025-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022930275.13.6e-112100.00uncharacterized protein At5g19025-like isoform X2 [Cucurbita moschata][more]
XP_023513615.13.6e-112100.00uncharacterized protein At5g19025-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022930274.14.8e-11294.20uncharacterized protein At5g19025-like isoform X1 [Cucurbita moschata][more]
XP_022999809.11.4e-11193.75uncharacterized protein At5g19025-like isoform X1 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT3G06180.17.4e-6767.55Ribosomal protein L34e superfamily protein[more]
AT5G19025.19.7e-5957.75Ribosomal protein L34e superfamily protein[more]
AT3G01170.15.4e-2537.88Ribosomal protein L34e superfamily protein[more]
AT5G15260.15.7e-1941.40Ribosomal protein L34e superfamily protein[more]
Match NameE-valueIdentityDescription
sp|P0C8Q9|Y5902_ARATH1.7e-5757.75Uncharacterized protein At5g19025 OS=Arabidopsis thaliana OX=3702 GN=At5g19025 P... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0KEK4|A0A0A0KEK4_CUCSA1.3e-8173.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G238650 PE=4 SV=1[more]
tr|A0A1S3C841|A0A1S3C841_CUCME4.9e-8172.77uncharacterized protein At5g19025 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
tr|A0A1S3C8P6|A0A1S3C8P6_CUCME4.9e-8177.14uncharacterized protein At5g19025 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
tr|A0A0D2UU87|A0A0D2UU87_GOSRA3.9e-7077.40Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G170000 PE=4 ... [more]
tr|A0A0D2T992|A0A0D2T992_GOSRA3.9e-7077.40Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G170000 PE=4 ... [more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR008195Ribosomal_L34Ae
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg15929-RACarg15929-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availablePANTHERPTHR10759:SF32SUBFAMILY NOT NAMEDcoord: 1..211
IPR008195Ribosomal protein L34AePANTHERPTHR1075960S RIBOSOMAL PROTEIN L34coord: 1..211

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg15929Carg05456Silver-seed gourdcarcarB080