Cla009369 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla009369
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Structural constituent of ribosome (AHRD V1 *- D7LAI5_ARALL); contains Interpro domain(s) IPR008195 Ribosomal protein L34e
Location	Chr6 : 6209088 .. 6209690 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCCGTCCTCAATTCTCACTTCATCGTCATCAATCTCCAAATCCAAGACTTCAACAAACCCTAGCCCTAGCAATTCCCTTCTTTGTAAACACTCTCCATCGGCAACCCTTGACCTTCTTATCCTCATTCTCGTTCTATTTTCTGGTACCTTCCTTGTAACCTCATATTTTTCTTACATTTTCAACTCTTTGTCGATTCTCTTGTCGCATTCCGCCCCGCAGCTTCCTCAATTTCCGTTTCCGTTTATTGCTGGGTTTTTGTTGTTCTTTTGTGTAACTATTGGTGTGTTTGAGATTTGTTGTGGCGCTAGATCGAGGAAATGCGCTAAGCCAGGATGTAAAGGGTTGAAAAAGGCTATGGAGTTTGATCTCCAATTGCAGACGGAGGAGTGTGTGAAGAGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCCAACCCGGATTATGAGTGCTTGAGGTCTGAGCTGAGGAAGATGGCACCACCCAATGGCCGAGCTGTTCTGCTCTTCCGGGCGCGCTGTGGCTGCCCCATCGCCAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAAGTGA

mRNA sequence

ATGCCTCCGTCCTCAATTCTCACTTCATCGTCATCAATCTCCAAATCCAAGACTTCAACAAACCCTAGCCCTAGCAATTCCCTTCTTTGTAAACACTCTCCATCGGCAACCCTTGACCTTCTTATCCTCATTCTCGTTCTATTTTCTGGTACCTTCCTTGTAACCTCATATTTTTCTTACATTTTCAACTCTTTGTCGATTCTCTTGTCGCATTCCGCCCCGCAGCTTCCTCAATTTCCGTTTCCGTTTATTGCTGGGTTTTTGTTGTTCTTTTGTGTAACTATTGGTGTGTTTGAGATTTGTTGTGGCGCTAGATCGAGGAAATGCGCTAAGCCAGGATGTAAAGGGTTGAAAAAGGCTATGGAGTTTGATCTCCAATTGCAGACGGAGGAGTGTGTGAAGAGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCCAACCCGGATTATGAGTGCTTGAGGTCTGAGCTGAGGAAGATGGCACCACCCAATGGCCGAGCTGTTCTGCTCTTCCGGGCGCGCTGTGGCTGCCCCATCGCCAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAAGTGA

Coding sequence (CDS)

ATGCCTCCGTCCTCAATTCTCACTTCATCGTCATCAATCTCCAAATCCAAGACTTCAACAAACCCTAGCCCTAGCAATTCCCTTCTTTGTAAACACTCTCCATCGGCAACCCTTGACCTTCTTATCCTCATTCTCGTTCTATTTTCTGGTACCTTCCTTGTAACCTCATATTTTTCTTACATTTTCAACTCTTTGTCGATTCTCTTGTCGCATTCCGCCCCGCAGCTTCCTCAATTTCCGTTTCCGTTTATTGCTGGGTTTTTGTTGTTCTTTTGTGTAACTATTGGTGTGTTTGAGATTTGTTGTGGCGCTAGATCGAGGAAATGCGCTAAGCCAGGATGTAAAGGGTTGAAAAAGGCTATGGAGTTTGATCTCCAATTGCAGACGGAGGAGTGTGTGAAGAGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCCAACCCGGATTATGAGTGCTTGAGGTCTGAGCTGAGGAAGATGGCACCACCCAATGGCCGAGCTGTTCTGCTCTTCCGGGCGCGCTGTGGCTGCCCCATCGCCAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAAGTGA

Protein sequence

MPPSSILTSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWGTKRGRRHKK

Homology

[Close]

BLAST of Cla009369 vs. Swiss-Prot
Match: Y5902_ARATH (Uncharacterized protein At5g19025 OS=Arabidopsis thaliana GN=At5g19025 PE=2 SV=3)

HSP 1 Score: 261.5 bits (667), Expect = 7.3e-69
Identity = 140/233 (60.09%), Postives = 160/233 (68.67%), Query Frame = 1


Query: 1   MPPSSILTSSSSISKSKTSTNPSPSNSL-LCKHSPSATLDLLILILVLFSGTFLVTSYFS 60
           MPPSS           +++ N + S+SL LCKHSPSATLDLLILILVLFSGTFL++SYFS
Sbjct: 24  MPPSS-----------RSAANQNSSSSLHLCKHSPSATLDLLILILVLFSGTFLLSSYFS 83

Query: 61  YIFNSLSILLSH----------SAPQLPQF---------------------PFPFIAGFL 120
           Y+ +SLS+L SH            P L  F                     P  F   F 
Sbjct: 84  YLIHSLSLLSSHFPSITISLSSLLPPLIIFFSSDHSTEDEDHHHPSGKIPPPASFFFAFA 143

Query: 121 LFFCVTIGVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKSGS-KEIDKLPWKG 180
           +FF  +I   ++CCG+RSRKC  P CKG+KKAMEFDLQLQTEECVKSGS KEID+LPWKG
Sbjct: 144 VFFAASIAFLDLCCGSRSRKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEIDRLPWKG 203

Query: 181 GSEANPDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWGTKRGRRHKK 201
           GSE+NPDYECLR+ELRKMAP NGRAVL+FR++CGCPIAKLEGWG KR RRHKK
Sbjct: 204 GSESNPDYECLRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKK 245

[Close]

BLAST of Cla009369 vs. TrEMBL
Match: A0A0A0KEK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G238650 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.0e-109
Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 1


Query: 1   MPPSSILTSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 60
           MPPSSIL+SSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY
Sbjct: 11  MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 70

Query: 61  IFNSLSILLSHSAPQLPQFPFPFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKA 120
           IFNSLSILLSHSAPQLPQFPF FIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKA
Sbjct: 71  IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKA 130

Query: 121 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 180
           MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC
Sbjct: 131 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 190

Query: 181 GCPIAKLEGWGTKRGRRHK 200
           GCPIAKLEGWGTKRGRRHK
Sbjct: 191 GCPIAKLEGWGTKRGRRHK 209

[Close]

BLAST of Cla009369 vs. TrEMBL
Match: M5Y586_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011602mg PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.1e-86
Identity = 156/204 (76.47%), Postives = 174/204 (85.29%), Query Frame = 1


Query: 1   MPPSSILTSSSSISKSKTSTNPSPSN----SLLCKHSPSATLDLLILILVLFSGTFLVTS 60
           MP S+  TSSSS +    S+NP+P+     +LLCKHSPSATLDLLILILVLFSGTFL+TS
Sbjct: 1   MPSSAAATSSSSPTPKPKSSNPNPNGNPNCTLLCKHSPSATLDLLILILVLFSGTFLITS 60

Query: 61  YFSYIFNSLSILLSHSAPQLPQFPFPFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKG 120
           YFSYIFNSLS+LLSHS+  L   P P++ GF+ FF V + + E CCG RSRKC +PGCKG
Sbjct: 61  YFSYIFNSLSLLLSHSSIHLHHIPVPYVVGFVAFFAVALFIVEFCCGTRSRKCDRPGCKG 120

Query: 121 LKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLF 180
           LKKAMEFDLQLQTEECVK+GSK+IDKLPWKGGSE NPDYECLRSELRKMAPPNGRAVLLF
Sbjct: 121 LKKAMEFDLQLQTEECVKTGSKDIDKLPWKGGSEGNPDYECLRSELRKMAPPNGRAVLLF 180

Query: 181 RARCGCPIAKLEGWGTKRGRRHKK 201
           RARCGCP+AKLEGWG KRGRRHKK
Sbjct: 181 RARCGCPVAKLEGWGPKRGRRHKK 204

[Close]

BLAST of Cla009369 vs. TrEMBL
Match: A5ADW3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036761 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 9.3e-79
Identity = 154/201 (76.62%), Postives = 165/201 (82.09%), Query Frame = 1


Query: 7   LTSSSSISKSKTSTNPS--PSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNS 66
           +TSS S    K S NP+  P+ SLLCKHSPSATLD+LILILVLFSGTFL+TSYFSYI  S
Sbjct: 3   VTSSPSPKPRKPSMNPNANPNCSLLCKHSPSATLDILILILVLFSGTFLITSYFSYIVQS 62

Query: 67  LS-----ILLSHSAPQLPQFPFPFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKK 126
           LS     I+LSHS     + P P+I GFL+FF V I   E+CCG RSRKC  PGCKGLKK
Sbjct: 63  LSLILPSIILSHSL-SFRESPGPYILGFLVFFAVFIVTIELCCGYRSRKCDNPGCKGLKK 122

Query: 127 AMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRAR 186
           AMEFDLQLQTEEC+KS SKEID LPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRAR
Sbjct: 123 AMEFDLQLQTEECLKSSSKEIDVLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRAR 182

Query: 187 CGCPIAKLEGWGTKRGRRHKK 201
           CGCPIAKLEGWG KRGRRHKK
Sbjct: 183 CGCPIAKLEGWGPKRGRRHKK 202

[Close]

BLAST of Cla009369 vs. TrEMBL
Match: F6HDL0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02590 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 9.3e-79
Identity = 154/201 (76.62%), Postives = 165/201 (82.09%), Query Frame = 1


Query: 7   LTSSSSISKSKTSTNPS--PSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNS 66
           +TSS S    K S NP+  P+ SLLCKHSPSATLD+LILILVLFSGTFL+TSYFSYI  S
Sbjct: 13  VTSSPSPKPRKPSMNPNANPNCSLLCKHSPSATLDILILILVLFSGTFLITSYFSYIVQS 72

Query: 67  LS-----ILLSHSAPQLPQFPFPFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKK 126
           LS     I+LSHS     + P P+I GFL+FF V I   E+CCG RSRKC  PGCKGLKK
Sbjct: 73  LSLILPSIILSHSL-SFRESPGPYILGFLVFFAVFIVTIELCCGYRSRKCDNPGCKGLKK 132

Query: 127 AMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRAR 186
           AMEFDLQLQTEEC+KS SKEID LPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRAR
Sbjct: 133 AMEFDLQLQTEECLKSSSKEIDVLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRAR 192

Query: 187 CGCPIAKLEGWGTKRGRRHKK 201
           CGCPIAKLEGWG KRGRRHKK
Sbjct: 193 CGCPIAKLEGWGPKRGRRHKK 212

[Close]

BLAST of Cla009369 vs. TrEMBL
Match: B9HMC5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s20620g PE=4 SV=2)

HSP 1 Score: 298.5 bits (763), Expect = 6.0e-78
Identity = 147/210 (70.00%), Postives = 171/210 (81.43%), Query Frame = 1


Query: 1   MPPSSILT---------SSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGT 60
           MPPSS  T         SSSS +   T++NP+PS +L CKHSPSATLDLLILILVLFSGT
Sbjct: 1   MPPSSSFTPKPLKSSAASSSSSNTGNTNSNPNPS-TLPCKHSPSATLDLLILILVLFSGT 60

Query: 61  FLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIAGFLLFFCVTIGVFEICCGARSRKCAK 120
           FL+TSYFSYIFNSLS+LLS+++  L   PFP+I GF   F +++   E CCG RSRKC K
Sbjct: 61  FLLTSYFSYIFNSLSLLLSNTSLSLHFPPFPYICGFFALFILSVLFIEFCCGPRSRKCDK 120

Query: 121 PGCKGLKKAMEFDLQLQTEECVKS-GSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           PGCKGLKKA+EFDLQLQTE+C KS    ++DKLPWKGG+E+NPDYECLR+ELRKMAPPNG
Sbjct: 121 PGCKGLKKAIEFDLQLQTEDCAKSTAGDDVDKLPWKGGTESNPDYECLRAELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKK 201
           RA+LLFRA+CGCP+AKLEGWG KRGRRHKK
Sbjct: 181 RAILLFRAKCGCPVAKLEGWGPKRGRRHKK 209

[Close]

BLAST of Cla009369 vs. NCBI nr
Match: gi|778714192|ref|XP_011657203.1| (PREDICTED: uncharacterized protein At5g19025 isoform X2 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 3.8e-110
Identity = 198/200 (99.00%), Postives = 199/200 (99.50%), Query Frame = 1


Query: 1   MPPSSILTSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 60
           MPPSSIL+SSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY
Sbjct: 11  MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 70

Query: 61  IFNSLSILLSHSAPQLPQFPFPFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKA 120
           IFNSLSILLSHSAPQLPQFPF FIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKA
Sbjct: 71  IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKA 130

Query: 121 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 180
           MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC
Sbjct: 131 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 190

Query: 181 GCPIAKLEGWGTKRGRRHKK 201
           GCPIAKLEGWGTKRGRRHKK
Sbjct: 191 GCPIAKLEGWGTKRGRRHKK 210

[Close]

BLAST of Cla009369 vs. NCBI nr
Match: gi|659117342|ref|XP_008458550.1| (PREDICTED: uncharacterized protein At5g19025 isoform X2 [Cucumis melo])

HSP 1 Score: 404.1 bits (1037), Expect = 1.5e-109
Identity = 197/200 (98.50%), Postives = 198/200 (99.00%), Query Frame = 1


Query: 1   MPPSSILTSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 60
           MPPSSIL+SSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY
Sbjct: 11  MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 70

Query: 61  IFNSLSILLSHSAPQLPQFPFPFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKA 120
           IFNSLSILLSHSAPQLPQFPF FIAGFLLFFC TIGVFEICCGARSRKCAKPGCKGLKKA
Sbjct: 71  IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKGLKKA 130

Query: 121 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 180
           MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC
Sbjct: 131 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 190

Query: 181 GCPIAKLEGWGTKRGRRHKK 201
           GCPIAKLEGWGTKRGRRHKK
Sbjct: 191 GCPIAKLEGWGTKRGRRHKK 210

[Close]

BLAST of Cla009369 vs. NCBI nr
Match: gi|778714189|ref|XP_011657202.1| (PREDICTED: uncharacterized protein At5g19025 isoform X1 [Cucumis sativus])

HSP 1 Score: 404.1 bits (1037), Expect = 1.5e-109
Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 1


Query: 1   MPPSSILTSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 60
           MPPSSIL+SSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY
Sbjct: 11  MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 70

Query: 61  IFNSLSILLSHSAPQLPQFPFPFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKA 120
           IFNSLSILLSHSAPQLPQFPF FIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKA
Sbjct: 71  IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKA 130

Query: 121 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 180
           MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC
Sbjct: 131 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 190

Query: 181 GCPIAKLEGWGTKRGRRHK 200
           GCPIAKLEGWGTKRGRRHK
Sbjct: 191 GCPIAKLEGWGTKRGRRHK 209

[Close]

BLAST of Cla009369 vs. NCBI nr
Match: gi|659117340|ref|XP_008458549.1| (PREDICTED: uncharacterized protein At5g19025 isoform X1 [Cucumis melo])

HSP 1 Score: 402.1 bits (1032), Expect = 5.6e-109
Identity = 196/199 (98.49%), Postives = 197/199 (98.99%), Query Frame = 1


Query: 1   MPPSSILTSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 60
           MPPSSIL+SSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY
Sbjct: 11  MPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY 70

Query: 61  IFNSLSILLSHSAPQLPQFPFPFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKA 120
           IFNSLSILLSHSAPQLPQFPF FIAGFLLFFC TIGVFEICCGARSRKCAKPGCKGLKKA
Sbjct: 71  IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCAKPGCKGLKKA 130

Query: 121 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 180
           MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC
Sbjct: 131 MEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARC 190

Query: 181 GCPIAKLEGWGTKRGRRHK 200
           GCPIAKLEGWGTKRGRRHK
Sbjct: 191 GCPIAKLEGWGTKRGRRHK 209

[Close]

BLAST of Cla009369 vs. NCBI nr
Match: gi|596287815|ref|XP_007225836.1| (hypothetical protein PRUPE_ppa011602mg [Prunus persica])

HSP 1 Score: 326.6 bits (836), Expect = 3.0e-86
Identity = 156/204 (76.47%), Postives = 174/204 (85.29%), Query Frame = 1


Query: 1   MPPSSILTSSSSISKSKTSTNPSPSN----SLLCKHSPSATLDLLILILVLFSGTFLVTS 60
           MP S+  TSSSS +    S+NP+P+     +LLCKHSPSATLDLLILILVLFSGTFL+TS
Sbjct: 1   MPSSAAATSSSSPTPKPKSSNPNPNGNPNCTLLCKHSPSATLDLLILILVLFSGTFLITS 60

Query: 61  YFSYIFNSLSILLSHSAPQLPQFPFPFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKG 120
           YFSYIFNSLS+LLSHS+  L   P P++ GF+ FF V + + E CCG RSRKC +PGCKG
Sbjct: 61  YFSYIFNSLSLLLSHSSIHLHHIPVPYVVGFVAFFAVALFIVEFCCGTRSRKCDRPGCKG 120

Query: 121 LKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLF 180
           LKKAMEFDLQLQTEECVK+GSK+IDKLPWKGGSE NPDYECLRSELRKMAPPNGRAVLLF
Sbjct: 121 LKKAMEFDLQLQTEECVKTGSKDIDKLPWKGGSEGNPDYECLRSELRKMAPPNGRAVLLF 180

Query: 181 RARCGCPIAKLEGWGTKRGRRHKK 201
           RARCGCP+AKLEGWG KRGRRHKK
Sbjct: 181 RARCGCPVAKLEGWGPKRGRRHKK 204

The following BLAST results are available for this feature:

BLAST of Cla009369 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5902_ARATH	7.3e-69	60.09	Uncharacterized protein At5g19025 OS=Arabidopsis thaliana GN=At5g19025 PE=2 SV=3	[more]

BLAST of Cla009369 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEK4_CUCSA	1.0e-109	98.99	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G238650 PE=4 SV=1	[more]
M5Y586_PRUPE	2.1e-86	76.47	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011602mg PE=4 SV=1	[more]
A5ADW3_VITVI	9.3e-79	76.62	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036761 PE=4 SV=1	[more]
F6HDL0_VITVI	9.3e-79	76.62	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02590 PE=4 SV=...	[more]
B9HMC5_POPTR	6.0e-78	70.00	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s20620g PE=4 SV=2	[more]

BLAST of Cla009369 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778714192\|ref\|XP_011657203.1\|	3.8e-110	99.00	PREDICTED: uncharacterized protein At5g19025 isoform X2 [Cucumis sativus]	[more]
gi\|659117342\|ref\|XP_008458550.1\|	1.5e-109	98.50	PREDICTED: uncharacterized protein At5g19025 isoform X2 [Cucumis melo]	[more]
gi\|778714189\|ref\|XP_011657202.1\|	1.5e-109	98.99	PREDICTED: uncharacterized protein At5g19025 isoform X1 [Cucumis sativus]	[more]
gi\|659117340\|ref\|XP_008458549.1\|	5.6e-109	98.49	PREDICTED: uncharacterized protein At5g19025 isoform X1 [Cucumis melo]	[more]
gi\|596287815\|ref\|XP_007225836.1\|	3.0e-86	76.47	hypothetical protein PRUPE_ppa011602mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008195	Ribosomal_L34Ae

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU31195	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU74132	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla009369	Cla009369.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU31195	WMU31195	transcribed_cluster
WMU74132	WMU74132	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008195	Ribosomal protein L34Ae	PANTHER	PTHR10759	60S RIBOSOMAL PROTEIN L34	coord: 1..200 score: 7.0E
None	No IPR available	PANTHER	PTHR10759:SF3	SUBFAMILY NOT NAMED	coord: 1..200 score: 7.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla009369	Cla97C06G115270	Watermelon (97103) v2	wmwmbB406
Cla009369	Csa6G238650	Cucumber (Chinese Long) v2	cuwmB548
Cla009369	MELO3C021397	Melon (DHL92) v3.5.1	mewmB141
Cla009369	ClCG06G005760	Watermelon (Charleston Gray)	wcgwmB344
Cla009369	CSPI06G15610	Wild cucumber (PI 183967)	cpiwmB567
Cla009369	Cucsa.260930	Cucumber (Gy14) v1	cgywmB486
Cla009369	CmaCh17G002750	Cucurbita maxima (Rimu)	cmawmB358
Cla009369	CmaCh08G011730	Cucurbita maxima (Rimu)	cmawmB878
Cla009369	CmoCh17G002620	Cucurbita moschata (Rifu)	cmowmB353
Cla009369	CmoCh08G011450	Cucurbita moschata (Rifu)	cmowmB867
Cla009369	Lsi09G013610	Bottle gourd (USVL1VR-Ls)	lsiwmB040
Cla009369	Cp4.1LG12g02300	Cucurbita pepo (Zucchini)	cpewmB161
Cla009369	Cp4.1LG17g01280	Cucurbita pepo (Zucchini)	cpewmB334
Cla009369	CsGy6G014890	Cucumber (Gy14) v2	cgybwmB508
Cla009369	MELO3C021397.2	Melon (DHL92) v3.6.1	medwmB139
Cla009369	Carg05456	Silver-seed gourd	carwmB0073
Cla009369	Carg15929	Silver-seed gourd	carwmB0317
Cla009369	CsaV3_6G018540	Cucumber (Chinese Long) v3	cucwmB569
Cla009369	Bhi12G001594	Wax gourd	wgowmB094

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla009369	Cucurbita pepo (Zucchini)	cpewmB623
Cla009369	Cucurbita pepo (Zucchini)	cpewmB853
Cla009369	Bottle gourd (USVL1VR-Ls)	lsiwmB383
Cla009369	Bottle gourd (USVL1VR-Ls)	lsiwmB384
Cla009369	Cucumber (Gy14) v2	cgybwmB262
Cla009369	Melon (DHL92) v3.6.1	medwmB474
Cla009369	Silver-seed gourd	carwmB0212
Cla009369	Silver-seed gourd	carwmB0604
Cla009369	Cucumber (Chinese Long) v3	cucwmB288
Cla009369	Watermelon (97103) v2	wmwmbB402
Cla009369	Watermelon (97103) v2	wmwmbB413
Cla009369	Wax gourd	wgowmB238
Cla009369	Wax gourd	wgowmB288
Cla009369	Watermelon (97103) v1	wmwmB116
Cla009369	Watermelon (97103) v1	wmwmB138
Cla009369	Cucumber (Gy14) v1	cgywmB483
Cla009369	Cucurbita maxima (Rimu)	cmawmB250
Cla009369	Cucurbita maxima (Rimu)	cmawmB811
Cla009369	Cucurbita moschata (Rifu)	cmowmB239
Cla009369	Cucurbita moschata (Rifu)	cmowmB802
Cla009369	Melon (DHL92) v3.5.1	mewmB486
Cla009369	Watermelon (Charleston Gray)	wcgwmB311
Cla009369	Watermelon (Charleston Gray)	wcgwmB395
Cla009369	Cucumber (Chinese Long) v2	cuwmB279