MELO3C020923 (gene) Melon (DHL92) v3.5.1

NameMELO3C020923
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionB3 domain-containing protein
Locationchr11 : 2774898 .. 2776082 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCCTCTAGTCGTCCGAAGAACGACGTCGTTAAACAACCTTGTAAAGCATCGGACAATCCCCATTTCTTTAAGGTTGTTAGTGCTAGGGCTCTCAAGGAACAAAAACTTGTAAGCAAATTTATATTACTCTTGATATCCAACGTCTTTTAATTGTTACGTTGTTTGACTTATTTGTCTTTCCATTTTAAGTACTATATAATGTTTTTTTAATAGGAAATCCCAAGAAAGTTTGTGAGAGAATATGGTGTAAAAGCTTTTGCAACTAACCAAATATGTCTCAAGGTGGCGGCTGATGGTAGAAAGTGGAATGTACGTTTGACAAAAACTAACGATGGAACAAGAGTGTGGTTTCATGATGATGGTTGGCAAATGTTTGTAGAGTTTTACTCTGTTGGATTGGAGTATTTTCTCGTCTTTAAATACGAACGTCAATCTTCGAGCTTTTACGTTGTTATCTTTGATCGTACGGCTACAGAAATCGAATATCCAATGAAGATCATAATTTGTATCGATGATGCTGAAGAAAAGGTAAAAAAGGAGACAAACATATCTCAAGGTATGTTTCTTGTTTGAGGTTTGATGTTGATGAAAAACATCAAATGTTTATTCTTTTATAATAATATTTTATAAAACTAGGCTCTTTTAATATTGACTTATAAGATTGTTTTTGGTCTTGGTTATATTAAAGTTAAACGTTTGAAATTTTAATAACTTAACTAATACACTTCAAATAAATACTAATAATTCAAAAGTACTTCTACACATGTCTAACTGATAACCCTTTTAGAAGTGTACTATTTTTTAAGCCAAGAGACAGTCTTTATTCTGTATATTGAACTATTTTTTTCTAATACAAGAGATTTCACTCTATCGTAAACTTGTAGCTAACACACTGTTAGTAAATTACACAAATCAACGTTCTTTTGGTGTGTTGTTTATTTGTACCGATCAATAATCAACAAAGAAAAAGAAACCTTAGATTCCAAAATTGGCAAAGTTAACTTTGGTGCTGTAGAACTGATGGACAACAAGAAGAAGCTACGGTCGACGACAACAAGCCAACGAGAAAAGGCAATGGCAAATGCTACCGCTTTCCAATCTATGACTATAAATCCTTCGTTCTTGTGCAAGATGTCACCTTCACACATTCATCGATCTCTTGTAAGCCAAATTAACTAA

mRNA sequence

ATGGGTTCCTCTAGTCGTCCGAAGAACGACGTCGTTAAACAACCTTGTAAAGCATCGGACAATCCCCATTTCTTTAAGGTTGTTAGTGCTAGGGCTCTCAAGGAACAAAAACTTGAAATCCCAAGAAAGTTTGTGAGAGAATATGGTGTAAAAGCTTTTGCAACTAACCAAATATGTCTCAAGGTGGCGGCTGATGGTAGAAAGTGGAATGTACGTTTGACAAAAACTAACGATGGAACAAGAGTGTGGTTTCATGATGATGGTTGGCAAATGTTTGTAGAGTTTTACTCTGTTGGATTGGAGTATTTTCTCGTCTTTAAATACGAACGTCAATCTTCGAGCTTTTACGTTGTTATCTTTGATCGTACGGCTACAGAAATCGAATATCCAATGAAGATCATAATTTGTATCGATGATGCTGAAGAAAAGGTAAAAAAGGAGACAAACATATCTCAAGAACTGATGGACAACAAGAAGAAGCTACGGTCGACGACAACAAGCCAACGAGAAAAGGCAATGGCAAATGCTACCGCTTTCCAATCTATGACTATAAATCCTTCGTTCTTGTGCAAGATGTCACCTTCACACATTCATCGATCTCTTGTAAGCCAAATTAACTAA

Coding sequence (CDS)

ATGGGTTCCTCTAGTCGTCCGAAGAACGACGTCGTTAAACAACCTTGTAAAGCATCGGACAATCCCCATTTCTTTAAGGTTGTTAGTGCTAGGGCTCTCAAGGAACAAAAACTTGAAATCCCAAGAAAGTTTGTGAGAGAATATGGTGTAAAAGCTTTTGCAACTAACCAAATATGTCTCAAGGTGGCGGCTGATGGTAGAAAGTGGAATGTACGTTTGACAAAAACTAACGATGGAACAAGAGTGTGGTTTCATGATGATGGTTGGCAAATGTTTGTAGAGTTTTACTCTGTTGGATTGGAGTATTTTCTCGTCTTTAAATACGAACGTCAATCTTCGAGCTTTTACGTTGTTATCTTTGATCGTACGGCTACAGAAATCGAATATCCAATGAAGATCATAATTTGTATCGATGATGCTGAAGAAAAGGTAAAAAAGGAGACAAACATATCTCAAGAACTGATGGACAACAAGAAGAAGCTACGGTCGACGACAACAAGCCAACGAGAAAAGGCAATGGCAAATGCTACCGCTTTCCAATCTATGACTATAAATCCTTCGTTCTTGTGCAAGATGTCACCTTCACACATTCATCGATCTCTTGTAAGCCAAATTAACTAA

Protein sequence

MGSSSRPKNDVVKQPCKASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEKVKKETNISQELMDNKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHIHRSLVSQIN*
BLAST of MELO3C020923 vs. Swiss-Prot
Match: Y4158_ARATH (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-12
Identity = 40/122 (32.79%), Postives = 71/122 (58.20%), Query Frame = 1

Query: 24  FFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVW 83
           FFK+V    +K++ + IP +FV+  G K    +++   V   G K +++L +   G  +W
Sbjct: 30  FFKLVLPSTMKDKMMRIPPRFVKLQGSKL---SEVVTLVTPAGYKRSIKLKRI--GEEIW 89

Query: 84  FHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEK 143
           FH+ GW  F E +S+   +FL+F+Y++ +SSF V+IF+ +A E  YP+  +  ID  ++ 
Sbjct: 90  FHE-GWSEFAEAHSIEEGHFLLFEYKK-NSSFRVIIFNASACETNYPLDAVHIIDSDDDV 144

Query: 144 VK 146
           ++
Sbjct: 150 IE 144

BLAST of MELO3C020923 vs. Swiss-Prot
Match: Y3896_ARATH (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana GN=At3g18960 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.8e-12
Identity = 51/177 (28.81%), Postives = 92/177 (51.98%), Query Frame = 1

Query: 24  FFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVW 83
           FFK+V    +K++ ++IP +FV+  G K   +  + L+  A G K +++L +   G  +W
Sbjct: 30  FFKLVLPSTMKDKMMKIPPRFVKLQGSKL--SEVVTLETPA-GFKRSIKLKRI--GEEIW 89

Query: 84  FHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEK 143
           FH+ GW  F E +S+   +FL+F+Y +++SSF V+IF+ +A E +YP+  +  ID  ++ 
Sbjct: 90  FHE-GWSEFAEAHSIEEGHFLLFEY-KENSSFRVIIFNVSACETKYPLDAVHIIDSDDDI 149

Query: 144 VK---KETNISQELMDNKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHI 198
           +    KE   +Q    N + +    T  + K  +       +  +   L  M+P H+
Sbjct: 150 IDITGKEFVGTQGTRKNNQSVNGGDTEHKSKKRSRDIELDKILHD---LDVMNPMHV 196

BLAST of MELO3C020923 vs. Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 1

Query: 22  PHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTR 81
           P F K++ +  ++E++L +P KFV ++  K   +  + L V  DG  W V L K ++  +
Sbjct: 4   PFFHKLIFSSTIQEKRLRVPDKFVSKF--KDELSVAVALTVP-DGHVWRVGLRKADN--K 63

Query: 82  VWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEY 130
           +WF D GWQ FV+ YS+ + Y L+F+YE  +S+F V IF+ + +EI Y
Sbjct: 64  IWFQD-GWQEFVDRYSIRIGYLLIFRYE-GNSAFSVYIFNLSHSEINY 104

BLAST of MELO3C020923 vs. Swiss-Prot
Match: Y1475_ARATH (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-09
Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 1

Query: 24  FFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVW 83
           F K++    + E+ +++P +FVR +G K   T+ + L+    G K ++R+ +  D   VW
Sbjct: 34  FIKIILLSRIIEKMMKVPARFVR-FGPKL--TDNVTLQTPV-GFKRSIRIKRIGD--EVW 93

Query: 84  FHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEK 143
           F + GW  F E +S+   +FL F YE  S  F VVIFD +A+EIEYP+      DD  E+
Sbjct: 94  F-EKGWSEFAEAHSLSDGHFLFFHYEGDSC-FRVVIFDVSASEIEYPLD---DTDDNREE 143

Query: 144 V 145
           V
Sbjct: 154 V 143

BLAST of MELO3C020923 vs. Swiss-Prot
Match: REM8_ARATH (B3 domain-containing protein REM8 OS=Arabidopsis thaliana GN=REM8 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.1e-06
Identity = 41/140 (29.29%), Postives = 67/140 (47.86%), Query Frame = 1

Query: 21  NPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGT 80
           N HFFK +      ++ L IP KF  E+         + L+  A  R W V++    DG 
Sbjct: 11  NKHFFKPLLPGF--QRNLNIPVKFFSEHIEGKHEGETVKLRADASKRTWEVKM----DGN 70

Query: 81  RVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDA 140
           R+    +GW+ FVE + + +  F+VF++E     F+V     +  EI+YP    I  ++ 
Sbjct: 71  RL---TEGWKEFVEAHDLRIRDFVVFRHE-GDMVFHVTALGPSCCEIQYPQS--ISHEEG 130

Query: 141 EEKVKKETNISQELMDNKKK 161
           EE  + E +  +E+ +N +K
Sbjct: 131 EESGEVEIS-EREVEENLQK 137

BLAST of MELO3C020923 vs. TrEMBL
Match: A0A0A0LJV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292240 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 7.7e-44
Identity = 101/178 (56.74%), Postives = 121/178 (67.98%), Query Frame = 1

Query: 39  EIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSV 98
           EIPRKFVREYG+KA   +QICLKV  DG++WNV LTK+N+GTRVW H  GW+  V FYSV
Sbjct: 3   EIPRKFVREYGLKALLKDQICLKVR-DGKEWNVGLTKSNNGTRVWLHY-GWEKLVGFYSV 62

Query: 99  GLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEKVKKETNISQELMD-- 158
              YFLVFKYE  S SFYVVIFD TATEIEYP+K    +D A+EKVK ET    + +D  
Sbjct: 63  KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVK-KTRLDKAKEKVKMETYFDDDCLDLD 122

Query: 159 --------------NKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHIHRS 201
                         N +    +T SQ+ +AMA A  FQSMT+NPSF+CK+ PSHIHR+
Sbjct: 123 FKDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRT 177

BLAST of MELO3C020923 vs. TrEMBL
Match: A0A059B061_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01965 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20
Identity = 71/183 (38.80%), Postives = 103/183 (56.28%), Query Frame = 1

Query: 19  SDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTND 78
           S  PHFFK+V + AL+  +L IP+KFVR+YG    + + +     A G  W V L + ND
Sbjct: 9   SQTPHFFKIVLSDALQNGRLGIPKKFVRKYG---SSLSDLVFLHLASGDVWEVELLRGND 68

Query: 79  GTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICID 138
           G    F   GW  FV+ Y++   +FLVF+YE   S+F VVIFD++ATEI+YP   ++  +
Sbjct: 69  GA---FLRRGWPDFVKHYAIEHGHFLVFRYE-GGSAFRVVIFDKSATEIKYP---LVSEN 128

Query: 139 DAEEKVKKETNISQELMDNKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHIH 198
           D     +   + S E+ ++     S   S++ +A+  AT+FQS   NP FL  M PS I 
Sbjct: 129 DDPRMEEDVGDASVEVFED----HSDQVSEKSEALERATSFQSP--NPFFLAIMQPSFIR 175

Query: 199 RSL 202
             L
Sbjct: 189 HCL 175

BLAST of MELO3C020923 vs. TrEMBL
Match: A0A059CCB4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00268 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19
Identity = 75/211 (35.55%), Postives = 118/211 (55.92%), Query Frame = 1

Query: 2   GSSSRPKNDVVKQPCKASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLK 61
           G  + P+ D    P     +PHFFK+V +RAL+  KL IP+ F+R YG     +  + LK
Sbjct: 13  GGGAEPEMD----PGSPPSSPHFFKIVLSRALESGKLGIPKSFLRRYGKD--LSGLVLLK 72

Query: 62  VAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFD 121
           V   G  W V+L K++DG +VW    GW+ F+E YS+G  + LVFKYE   S F+V+IFD
Sbjct: 73  VPG-GSTWPVKLEKSDDG-KVWLW-KGWRGFMEHYSIGHGHLLVFKYE-GDSVFHVIIFD 132

Query: 122 RTATEIEYPMKIIICIDDAEEKV--KKETNISQELMDNKKKL----RSTTTSQREKAM-- 181
           ++A+EI+YP  I   +   EE+   +KE ++  E+ D++  +     S+  S RE  +  
Sbjct: 133 KSASEIDYPSSIESDMSSPEEEFLSRKEEDV-VEIKDSEGSVPCSQPSSYRSSREYGVPS 192

Query: 182 ---ANATAFQSMTINPSFLCKMSPSHIHRSL 202
              A   A +  + +P F   + P+++ +SL
Sbjct: 193 HLAAFELASEFKSDHPFFKVVIQPTYVRKSL 212

BLAST of MELO3C020923 vs. TrEMBL
Match: A0A059CBR1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00268 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19
Identity = 75/211 (35.55%), Postives = 118/211 (55.92%), Query Frame = 1

Query: 2   GSSSRPKNDVVKQPCKASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLK 61
           G  + P+ D    P     +PHFFK+V +RAL+  KL IP+ F+R YG     +  + LK
Sbjct: 13  GGGAEPEMD----PGSPPSSPHFFKIVLSRALESGKLGIPKSFLRRYGKD--LSGLVLLK 72

Query: 62  VAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFD 121
           V   G  W V+L K++DG +VW    GW+ F+E YS+G  + LVFKYE   S F+V+IFD
Sbjct: 73  VPG-GSTWPVKLEKSDDG-KVWLW-KGWRGFMEHYSIGHGHLLVFKYE-GDSVFHVIIFD 132

Query: 122 RTATEIEYPMKIIICIDDAEEKV--KKETNISQELMDNKKKL----RSTTTSQREKAM-- 181
           ++A+EI+YP  I   +   EE+   +KE ++  E+ D++  +     S+  S RE  +  
Sbjct: 133 KSASEIDYPSSIESDMSSPEEEFLSRKEEDV-VEIKDSEGSVPCSQPSSYRSSREYGVPS 192

Query: 182 ---ANATAFQSMTINPSFLCKMSPSHIHRSL 202
              A   A +  + +P F   + P+++ +SL
Sbjct: 193 HLAAFELASEFKSDHPFFKVVIQPTYVRKSL 212

BLAST of MELO3C020923 vs. TrEMBL
Match: A0A059CD82_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00268 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19
Identity = 75/211 (35.55%), Postives = 118/211 (55.92%), Query Frame = 1

Query: 2   GSSSRPKNDVVKQPCKASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLK 61
           G  + P+ D    P     +PHFFK+V +RAL+  KL IP+ F+R YG     +  + LK
Sbjct: 13  GGGAEPEMD----PGSPPSSPHFFKIVLSRALESGKLGIPKSFLRRYGKD--LSGLVLLK 72

Query: 62  VAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFD 121
           V   G  W V+L K++DG +VW    GW+ F+E YS+G  + LVFKYE   S F+V+IFD
Sbjct: 73  VPG-GSTWPVKLEKSDDG-KVWLW-KGWRGFMEHYSIGHGHLLVFKYE-GDSVFHVIIFD 132

Query: 122 RTATEIEYPMKIIICIDDAEEKV--KKETNISQELMDNKKKL----RSTTTSQREKAM-- 181
           ++A+EI+YP  I   +   EE+   +KE ++  E+ D++  +     S+  S RE  +  
Sbjct: 133 KSASEIDYPSSIESDMSSPEEEFLSRKEEDV-VEIKDSEGSVPCSQPSSYRSSREYGVPS 192

Query: 182 ---ANATAFQSMTINPSFLCKMSPSHIHRSL 202
              A   A +  + +P F   + P+++ +SL
Sbjct: 193 HLAAFELASEFKSDHPFFKVVIQPTYVRKSL 212

BLAST of MELO3C020923 vs. TAIR10
Match: AT4G01580.1 (AT4G01580.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13
Identity = 40/122 (32.79%), Postives = 71/122 (58.20%), Query Frame = 1

Query: 24  FFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVW 83
           FFK+V    +K++ + IP +FV+  G K    +++   V   G K +++L +   G  +W
Sbjct: 30  FFKLVLPSTMKDKMMRIPPRFVKLQGSKL---SEVVTLVTPAGYKRSIKLKRI--GEEIW 89

Query: 84  FHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEK 143
           FH+ GW  F E +S+   +FL+F+Y++ +SSF V+IF+ +A E  YP+  +  ID  ++ 
Sbjct: 90  FHE-GWSEFAEAHSIEEGHFLLFEYKK-NSSFRVIIFNASACETNYPLDAVHIIDSDDDV 144

Query: 144 VK 146
           ++
Sbjct: 150 IE 144

BLAST of MELO3C020923 vs. TAIR10
Match: AT3G18960.1 (AT3G18960.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 73.2 bits (178), Expect = 2.2e-13
Identity = 51/177 (28.81%), Postives = 92/177 (51.98%), Query Frame = 1

Query: 24  FFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVW 83
           FFK+V    +K++ ++IP +FV+  G K   +  + L+  A G K +++L +   G  +W
Sbjct: 30  FFKLVLPSTMKDKMMKIPPRFVKLQGSKL--SEVVTLETPA-GFKRSIKLKRI--GEEIW 89

Query: 84  FHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEK 143
           FH+ GW  F E +S+   +FL+F+Y +++SSF V+IF+ +A E +YP+  +  ID  ++ 
Sbjct: 90  FHE-GWSEFAEAHSIEEGHFLLFEY-KENSSFRVIIFNVSACETKYPLDAVHIIDSDDDI 149

Query: 144 VK---KETNISQELMDNKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHI 198
           +    KE   +Q    N + +    T  + K  +       +  +   L  M+P H+
Sbjct: 150 IDITGKEFVGTQGTRKNNQSVNGGDTEHKSKKRSRDIELDKILHD---LDVMNPMHV 196

BLAST of MELO3C020923 vs. TAIR10
Match: AT3G18990.1 (AT3G18990.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 71.6 bits (174), Expect = 6.3e-13
Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 1

Query: 22  PHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTR 81
           P F K++ +  ++E++L +P KFV ++  K   +  + L V  DG  W V L K ++  +
Sbjct: 4   PFFHKLIFSSTIQEKRLRVPDKFVSKF--KDELSVAVALTVP-DGHVWRVGLRKADN--K 63

Query: 82  VWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEY 130
           +WF D GWQ FV+ YS+ + Y L+F+YE  +S+F V IF+ + +EI Y
Sbjct: 64  IWFQD-GWQEFVDRYSIRIGYLLIFRYE-GNSAFSVYIFNLSHSEINY 104

BLAST of MELO3C020923 vs. TAIR10
Match: AT1G49475.1 (AT1G49475.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 1

Query: 24  FFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVW 83
           F K++    + E+ +++P +FVR +G K   T+ + L+    G K ++R+ +  D   VW
Sbjct: 34  FIKIILLSRIIEKMMKVPARFVR-FGPKL--TDNVTLQTPV-GFKRSIRIKRIGD--EVW 93

Query: 84  FHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEK 143
           F + GW  F E +S+   +FL F YE  S  F VVIFD +A+EIEYP+      DD  E+
Sbjct: 94  F-EKGWSEFAEAHSLSDGHFLFFHYEGDSC-FRVVIFDVSASEIEYPLD---DTDDNREE 143

Query: 144 V 145
           V
Sbjct: 154 V 143

BLAST of MELO3C020923 vs. TAIR10
Match: AT4G31680.1 (AT4G31680.1 Transcriptional factor B3 family protein)

HSP 1 Score: 52.0 bits (123), Expect = 5.1e-07
Identity = 41/140 (29.29%), Postives = 67/140 (47.86%), Query Frame = 1

Query: 21  NPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGT 80
           N HFFK +      ++ L IP KF  E+         + L+  A  R W V++    DG 
Sbjct: 11  NKHFFKPLLPGF--QRNLNIPVKFFSEHIEGKHEGETVKLRADASKRTWEVKM----DGN 70

Query: 81  RVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDA 140
           R+    +GW+ FVE + + +  F+VF++E     F+V     +  EI+YP    I  ++ 
Sbjct: 71  RL---TEGWKEFVEAHDLRIRDFVVFRHE-GDMVFHVTALGPSCCEIQYPQS--ISHEEG 130

Query: 141 EEKVKKETNISQELMDNKKK 161
           EE  + E +  +E+ +N +K
Sbjct: 131 EESGEVEIS-EREVEENLQK 137

BLAST of MELO3C020923 vs. NCBI nr
Match: gi|659116202|ref|XP_008457960.1| (PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo])

HSP 1 Score: 408.7 bits (1049), Expect = 6.1e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1

Query: 1   MGSSSRPKNDVVKQPCKASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICL 60
           MGSSSRPKNDVVKQPCKASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICL
Sbjct: 278 MGSSSRPKNDVVKQPCKASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICL 337

Query: 61  KVAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIF 120
           KVAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIF
Sbjct: 338 KVAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIF 397

Query: 121 DRTATEIEYPMKIIICIDDAEEKVKKETNISQELMDNKKKLRSTTTSQREKAMANATAFQ 180
           DRTATEIEYPMKIIICIDDAEEKVKKETNISQELMDNKKKLRSTTTSQREKAMANATAFQ
Sbjct: 398 DRTATEIEYPMKIIICIDDAEEKVKKETNISQELMDNKKKLRSTTTSQREKAMANATAFQ 457

Query: 181 SMTINPSFLCKMSPSHIHRSL 202
           SMTINPSFLCKMSPSHIHRSL
Sbjct: 458 SMTINPSFLCKMSPSHIHRSL 478

BLAST of MELO3C020923 vs. NCBI nr
Match: gi|659116202|ref|XP_008457960.1| (PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo])

HSP 1 Score: 116.3 bits (290), Expect = 6.3e-23
Identity = 60/137 (43.80%), Postives = 91/137 (66.42%), Query Frame = 1

Query: 18  ASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTN 77
           +S  PHFFKV+  + L ++KLE+P+KFVR+YG +A    ++ LK+   G KW V L K+N
Sbjct: 5   SSSMPHFFKVILPQTLTQKKLEVPKKFVRKYG-EALKAEEVWLKIMVSGAKWKVGLKKSN 64

Query: 78  DGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICI 137
           +  +VWF + GW+ FV+F+S+   +FL F+YE  +S F VVIFD+TATEIEYP+      
Sbjct: 65  E--KVWF-EKGWEEFVKFHSIDYGHFLTFRYE-GNSCFQVVIFDQTATEIEYPISFKNQF 124

Query: 138 DDAEEKVKKETNISQEL 155
           D+ +   +K  ++ + L
Sbjct: 125 DNKKMFEEKRKSVQETL 136


HSP 2 Score: 321.2 bits (822), Expect = 1.3e-84
Identity = 163/202 (80.69%), Postives = 177/202 (87.62%), Query Frame = 1

Query: 9   NDVVKQPCKASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRK 68
           N+VVK+P KA D+PHFFKVV A ALK+QKLEIP KFVREYGVKAFATNQICLKVAADGRK
Sbjct: 9   NNVVKRPRKALDSPHFFKVVMASALKDQKLEIPTKFVREYGVKAFATNQICLKVAADGRK 68

Query: 69  WNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIE 128
           WNV LTK+NDGTRVWFHD GWQ FVEFYSVGLEYFLVFKYE QSSSFYVVIFDRTATEIE
Sbjct: 69  WNVGLTKSNDGTRVWFHDHGWQTFVEFYSVGLEYFLVFKYECQSSSFYVVIFDRTATEIE 128

Query: 129 YPMKIIICIDDAEEKVKKETNISQ------------ELMDNKKKLRSTTTSQREKAMANA 188
           YP+K IIC+DDAEEKVKKET+ISQ            ELMDNKKKL  TTT+QRE+AMA+A
Sbjct: 129 YPIK-IICLDDAEEKVKKETHISQDSKTGEVNFGAVELMDNKKKLWPTTTNQRERAMASA 188

Query: 189 TAFQSMTINPSFLCKMSPSHIH 199
           +AFQSMT+NPSF+CKMS SHIH
Sbjct: 189 SAFQSMTLNPSFMCKMSTSHIH 209

BLAST of MELO3C020923 vs. NCBI nr
Match: gi|659116200|ref|XP_008457959.1| (PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo])

HSP 1 Score: 228.4 bits (581), Expect = 1.1e-56
Identity = 126/214 (58.88%), Postives = 150/214 (70.09%), Query Frame = 1

Query: 3   SSSRPKNDVVKQPCKAS-DNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLK 62
           SS    N +VKQP KA   NPHFFKVV   ALKEQKLEIPRKFVREYG++A   +Q+CLK
Sbjct: 4   SSHHQPNSIVKQPDKALLHNPHFFKVVLDDALKEQKLEIPRKFVREYGLQALLKDQVCLK 63

Query: 63  VAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFD 122
           V  DG++WNV LTK+N+GTRVWFH  GW+  VEFYSV   YFLVFKYE QSSS YVVIFD
Sbjct: 64  VR-DGKEWNVGLTKSNNGTRVWFHY-GWEKLVEFYSVKSGYFLVFKYENQSSSLYVVIFD 123

Query: 123 RTATEIEYPMKIIICIDDAEEKVKKETNISQEL---------------MDNKKKLRSTTT 182
           RTATEIEYP+K  I +D ++E+VK ET    +L                 N +    +T 
Sbjct: 124 RTATEIEYPVK-KISLDKSKERVKMETYFDDDLDLDFKDGDLSFGVKKPTNSRWKPPSTG 183

Query: 183 SQREKAMANATAFQSMTINPSFLCKMSPSHIHRS 201
           SQ+ +AMA A  FQSMT+NPSF+CK+ PSHIHR+
Sbjct: 184 SQQARAMAKANRFQSMTLNPSFICKVWPSHIHRT 214

BLAST of MELO3C020923 vs. NCBI nr
Match: gi|700206924|gb|KGN62043.1| (hypothetical protein Csa_2G292240 [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-43
Identity = 101/178 (56.74%), Postives = 121/178 (67.98%), Query Frame = 1

Query: 39  EIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSV 98
           EIPRKFVREYG+KA   +QICLKV  DG++WNV LTK+N+GTRVW H  GW+  V FYSV
Sbjct: 3   EIPRKFVREYGLKALLKDQICLKVR-DGKEWNVGLTKSNNGTRVWLHY-GWEKLVGFYSV 62

Query: 99  GLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEKVKKETNISQELMD-- 158
              YFLVFKYE  S SFYVVIFD TATEIEYP+K    +D A+EKVK ET    + +D  
Sbjct: 63  KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVK-KTRLDKAKEKVKMETYFDDDCLDLD 122

Query: 159 --------------NKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHIHRS 201
                         N +    +T SQ+ +AMA A  FQSMT+NPSF+CK+ PSHIHR+
Sbjct: 123 FKDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRT 177

BLAST of MELO3C020923 vs. NCBI nr
Match: gi|629093291|gb|KCW59286.1| (hypothetical protein EUGRSUZ_H01965 [Eucalyptus grandis])

HSP 1 Score: 108.2 bits (269), Expect = 1.7e-20
Identity = 71/183 (38.80%), Postives = 103/183 (56.28%), Query Frame = 1

Query: 19  SDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTND 78
           S  PHFFK+V + AL+  +L IP+KFVR+YG    + + +     A G  W V L + ND
Sbjct: 9   SQTPHFFKIVLSDALQNGRLGIPKKFVRKYG---SSLSDLVFLHLASGDVWEVELLRGND 68

Query: 79  GTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICID 138
           G    F   GW  FV+ Y++   +FLVF+YE   S+F VVIFD++ATEI+YP   ++  +
Sbjct: 69  GA---FLRRGWPDFVKHYAIEHGHFLVFRYE-GGSAFRVVIFDKSATEIKYP---LVSEN 128

Query: 139 DAEEKVKKETNISQELMDNKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHIH 198
           D     +   + S E+ ++     S   S++ +A+  AT+FQS   NP FL  M PS I 
Sbjct: 129 DDPRMEEDVGDASVEVFED----HSDQVSEKSEALERATSFQSP--NPFFLAIMQPSFIR 175

Query: 199 RSL 202
             L
Sbjct: 189 HCL 175

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Y4158_ARATH2.2e-1232.79B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2... [more]
Y3896_ARATH3.8e-1228.81B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana GN=At3g18960 PE=2... [more]
VRN1_ARATH1.1e-1137.96B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 P... [more]
Y1475_ARATH2.3e-0937.19B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana GN=At1g49475 PE=2... [more]
REM8_ARATH9.1e-0629.29B3 domain-containing protein REM8 OS=Arabidopsis thaliana GN=REM8 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LJV0_CUCSA7.7e-4456.74Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292240 PE=4 SV=1[more]
A0A059B061_EUCGR1.2e-2038.80Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01965 PE=4 SV=1[more]
A0A059CCB4_EUCGR1.3e-1935.55Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00268 PE=4 SV=1[more]
A0A059CBR1_EUCGR1.3e-1935.55Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00268 PE=4 SV=1[more]
A0A059CD82_EUCGR1.3e-1935.55Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00268 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G01580.11.3e-1332.79 AP2/B3-like transcriptional factor family protein[more]
AT3G18960.12.2e-1328.81 AP2/B3-like transcriptional factor family protein[more]
AT3G18990.16.3e-1337.96 AP2/B3-like transcriptional factor family protein[more]
AT1G49475.11.3e-1037.19 AP2/B3-like transcriptional factor family protein[more]
AT4G31680.15.1e-0729.29 Transcriptional factor B3 family protein[more]
Match NameE-valueIdentityDescription
gi|659116202|ref|XP_008457960.1|6.1e-111100.00PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo][more]
gi|659116202|ref|XP_008457960.1|6.3e-2343.80PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo][more]
gi|659116200|ref|XP_008457959.1|1.1e-5658.88PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo][more]
gi|700206924|gb|KGN62043.1|1.1e-4356.74hypothetical protein Csa_2G292240 [Cucumis sativus][more]
gi|629093291|gb|KCW59286.1|1.7e-2038.80hypothetical protein EUGRSUZ_H01965 [Eucalyptus grandis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003340B3_DNA-bd
IPR015300DNA-bd_pseudobarrel_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020923T1MELO3C020923T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 24..122
score: 1.8
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 24..123
score: 2.0
IPR003340B3 DNA binding domainPROFILEPS50863B3coord: 23..123
score: 11
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 19..123
score: 7.0
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 19..130
score: 4.12
NoneNo IPR availableunknownCoilCoilcoord: 137..157
scor
NoneNo IPR availablePANTHERPTHR31674FAMILY NOT NAMEDcoord: 8..201
score: 1.5
NoneNo IPR availablePANTHERPTHR31674:SF1SUBFAMILY NOT NAMEDcoord: 8..201
score: 1.5

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C020923Cucurbita pepo (Zucchini)cpemeB663
MELO3C020923Silver-seed gourdcarmeB1028
MELO3C020923Cucurbita maxima (Rimu)cmameB546
MELO3C020923Cucurbita moschata (Rifu)cmomeB547