MELO3C020923 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C020923
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	B3 domain-containing protein
Location	chr11 : 2774898 .. 2776082 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCTCTAGTCGTCCGAAGAACGACGTCGTTAAACAACCTTGTAAAGCATCGGACAATCCCCATTTCTTTAAGGTTGTTAGTGCTAGGGCTCTCAAGGAACAAAAACTTGTAAGCAAATTTATATTACTCTTGATATCCAACGTCTTTTAATTGTTACGTTGTTTGACTTATTTGTCTTTCCATTTTAAGTACTATATAATGTTTTTTTAATAGGAAATCCCAAGAAAGTTTGTGAGAGAATATGGTGTAAAAGCTTTTGCAACTAACCAAATATGTCTCAAGGTGGCGGCTGATGGTAGAAAGTGGAATGTACGTTTGACAAAAACTAACGATGGAACAAGAGTGTGGTTTCATGATGATGGTTGGCAAATGTTTGTAGAGTTTTACTCTGTTGGATTGGAGTATTTTCTCGTCTTTAAATACGAACGTCAATCTTCGAGCTTTTACGTTGTTATCTTTGATCGTACGGCTACAGAAATCGAATATCCAATGAAGATCATAATTTGTATCGATGATGCTGAAGAAAAGGTAAAAAAGGAGACAAACATATCTCAAGGTATGTTTCTTGTTTGAGGTTTGATGTTGATGAAAAACATCAAATGTTTATTCTTTTATAATAATATTTTATAAAACTAGGCTCTTTTAATATTGACTTATAAGATTGTTTTTGGTCTTGGTTATATTAAAGTTAAACGTTTGAAATTTTAATAACTTAACTAATACACTTCAAATAAATACTAATAATTCAAAAGTACTTCTACACATGTCTAACTGATAACCCTTTTAGAAGTGTACTATTTTTTAAGCCAAGAGACAGTCTTTATTCTGTATATTGAACTATTTTTTTCTAATACAAGAGATTTCACTCTATCGTAAACTTGTAGCTAACACACTGTTAGTAAATTACACAAATCAACGTTCTTTTGGTGTGTTGTTTATTTGTACCGATCAATAATCAACAAAGAAAAAGAAACCTTAGATTCCAAAATTGGCAAAGTTAACTTTGGTGCTGTAGAACTGATGGACAACAAGAAGAAGCTACGGTCGACGACAACAAGCCAACGAGAAAAGGCAATGGCAAATGCTACCGCTTTCCAATCTATGACTATAAATCCTTCGTTCTTGTGCAAGATGTCACCTTCACACATTCATCGATCTCTTGTAAGCCAAATTAACTAA

mRNA sequence

ATGGGTTCCTCTAGTCGTCCGAAGAACGACGTCGTTAAACAACCTTGTAAAGCATCGGACAATCCCCATTTCTTTAAGGTTGTTAGTGCTAGGGCTCTCAAGGAACAAAAACTTGAAATCCCAAGAAAGTTTGTGAGAGAATATGGTGTAAAAGCTTTTGCAACTAACCAAATATGTCTCAAGGTGGCGGCTGATGGTAGAAAGTGGAATGTACGTTTGACAAAAACTAACGATGGAACAAGAGTGTGGTTTCATGATGATGGTTGGCAAATGTTTGTAGAGTTTTACTCTGTTGGATTGGAGTATTTTCTCGTCTTTAAATACGAACGTCAATCTTCGAGCTTTTACGTTGTTATCTTTGATCGTACGGCTACAGAAATCGAATATCCAATGAAGATCATAATTTGTATCGATGATGCTGAAGAAAAGGTAAAAAAGGAGACAAACATATCTCAAGAACTGATGGACAACAAGAAGAAGCTACGGTCGACGACAACAAGCCAACGAGAAAAGGCAATGGCAAATGCTACCGCTTTCCAATCTATGACTATAAATCCTTCGTTCTTGTGCAAGATGTCACCTTCACACATTCATCGATCTCTTGTAAGCCAAATTAACTAA

Coding sequence (CDS)

ATGGGTTCCTCTAGTCGTCCGAAGAACGACGTCGTTAAACAACCTTGTAAAGCATCGGACAATCCCCATTTCTTTAAGGTTGTTAGTGCTAGGGCTCTCAAGGAACAAAAACTTGAAATCCCAAGAAAGTTTGTGAGAGAATATGGTGTAAAAGCTTTTGCAACTAACCAAATATGTCTCAAGGTGGCGGCTGATGGTAGAAAGTGGAATGTACGTTTGACAAAAACTAACGATGGAACAAGAGTGTGGTTTCATGATGATGGTTGGCAAATGTTTGTAGAGTTTTACTCTGTTGGATTGGAGTATTTTCTCGTCTTTAAATACGAACGTCAATCTTCGAGCTTTTACGTTGTTATCTTTGATCGTACGGCTACAGAAATCGAATATCCAATGAAGATCATAATTTGTATCGATGATGCTGAAGAAAAGGTAAAAAAGGAGACAAACATATCTCAAGAACTGATGGACAACAAGAAGAAGCTACGGTCGACGACAACAAGCCAACGAGAAAAGGCAATGGCAAATGCTACCGCTTTCCAATCTATGACTATAAATCCTTCGTTCTTGTGCAAGATGTCACCTTCACACATTCATCGATCTCTTGTAAGCCAAATTAACTAA

Protein sequence

MGSSSRPKNDVVKQPCKASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEKVKKETNISQELMDNKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHIHRSLVSQIN*

Homology

[Close]

BLAST of MELO3C020923 vs. Swiss-Prot
Match: Y4158_ARATH (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-12
Identity = 40/122 (32.79%), Postives = 71/122 (58.20%), Query Frame = 1


Query: 24  FFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVW 83
           FFK+V    +K++ + IP +FV+  G K    +++   V   G K +++L +   G  +W
Sbjct: 30  FFKLVLPSTMKDKMMRIPPRFVKLQGSKL---SEVVTLVTPAGYKRSIKLKRI--GEEIW 89

Query: 84  FHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEK 143
           FH+ GW  F E +S+   +FL+F+Y++ +SSF V+IF+ +A E  YP+  +  ID  ++ 
Sbjct: 90  FHE-GWSEFAEAHSIEEGHFLLFEYKK-NSSFRVIIFNASACETNYPLDAVHIIDSDDDV 144

Query: 144 VK 146
           ++
Sbjct: 150 IE 144

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BLAST of MELO3C020923 vs. Swiss-Prot
Match: Y3896_ARATH (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana GN=At3g18960 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.8e-12
Identity = 51/177 (28.81%), Postives = 92/177 (51.98%), Query Frame = 1


Query: 24  FFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVW 83
           FFK+V    +K++ ++IP +FV+  G K   +  + L+  A G K +++L +   G  +W
Sbjct: 30  FFKLVLPSTMKDKMMKIPPRFVKLQGSKL--SEVVTLETPA-GFKRSIKLKRI--GEEIW 89

Query: 84  FHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEK 143
           FH+ GW  F E +S+   +FL+F+Y +++SSF V+IF+ +A E +YP+  +  ID  ++ 
Sbjct: 90  FHE-GWSEFAEAHSIEEGHFLLFEY-KENSSFRVIIFNVSACETKYPLDAVHIIDSDDDI 149

Query: 144 VK---KETNISQELMDNKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHI 198
           +    KE   +Q    N + +    T  + K  +       +  +   L  M+P H+
Sbjct: 150 IDITGKEFVGTQGTRKNNQSVNGGDTEHKSKKRSRDIELDKILHD---LDVMNPMHV 196

[Close]

BLAST of MELO3C020923 vs. Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 1


Query: 22  PHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTR 81
           P F K++ +  ++E++L +P KFV ++  K   +  + L V  DG  W V L K ++  +
Sbjct: 4   PFFHKLIFSSTIQEKRLRVPDKFVSKF--KDELSVAVALTVP-DGHVWRVGLRKADN--K 63

Query: 82  VWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEY 130
           +WF D GWQ FV+ YS+ + Y L+F+YE  +S+F V IF+ + +EI Y
Sbjct: 64  IWFQD-GWQEFVDRYSIRIGYLLIFRYE-GNSAFSVYIFNLSHSEINY 104

[Close]

BLAST of MELO3C020923 vs. Swiss-Prot
Match: Y1475_ARATH (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-09
Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 1


Query: 24  FFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVW 83
           F K++    + E+ +++P +FVR +G K   T+ + L+    G K ++R+ +  D   VW
Sbjct: 34  FIKIILLSRIIEKMMKVPARFVR-FGPKL--TDNVTLQTPV-GFKRSIRIKRIGD--EVW 93

Query: 84  FHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEK 143
           F + GW  F E +S+   +FL F YE  S  F VVIFD +A+EIEYP+      DD  E+
Sbjct: 94  F-EKGWSEFAEAHSLSDGHFLFFHYEGDSC-FRVVIFDVSASEIEYPLD---DTDDNREE 143

Query: 144 V 145
           V
Sbjct: 154 V 143

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BLAST of MELO3C020923 vs. Swiss-Prot
Match: REM8_ARATH (B3 domain-containing protein REM8 OS=Arabidopsis thaliana GN=REM8 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.1e-06
Identity = 41/140 (29.29%), Postives = 67/140 (47.86%), Query Frame = 1


Query: 21  NPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGT 80
           N HFFK +      ++ L IP KF  E+         + L+  A  R W V++    DG 
Sbjct: 11  NKHFFKPLLPGF--QRNLNIPVKFFSEHIEGKHEGETVKLRADASKRTWEVKM----DGN 70

Query: 81  RVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDA 140
           R+    +GW+ FVE + + +  F+VF++E     F+V     +  EI+YP    I  ++ 
Sbjct: 71  RL---TEGWKEFVEAHDLRIRDFVVFRHE-GDMVFHVTALGPSCCEIQYPQS--ISHEEG 130

Query: 141 EEKVKKETNISQELMDNKKK 161
           EE  + E +  +E+ +N +K
Sbjct: 131 EESGEVEIS-EREVEENLQK 137

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BLAST of MELO3C020923 vs. TrEMBL
Match: A0A0A0LJV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292240 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 7.7e-44
Identity = 101/178 (56.74%), Postives = 121/178 (67.98%), Query Frame = 1


Query: 39  EIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSV 98
           EIPRKFVREYG+KA   +QICLKV  DG++WNV LTK+N+GTRVW H  GW+  V FYSV
Sbjct: 3   EIPRKFVREYGLKALLKDQICLKVR-DGKEWNVGLTKSNNGTRVWLHY-GWEKLVGFYSV 62

Query: 99  GLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEKVKKETNISQELMD-- 158
              YFLVFKYE  S SFYVVIFD TATEIEYP+K    +D A+EKVK ET    + +D  
Sbjct: 63  KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVK-KTRLDKAKEKVKMETYFDDDCLDLD 122

Query: 159 --------------NKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHIHRS 201
                         N +    +T SQ+ +AMA A  FQSMT+NPSF+CK+ PSHIHR+
Sbjct: 123 FKDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRT 177

[Close]

BLAST of MELO3C020923 vs. TrEMBL
Match: A0A059B061_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01965 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20
Identity = 71/183 (38.80%), Postives = 103/183 (56.28%), Query Frame = 1


Query: 19  SDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTND 78
           S  PHFFK+V + AL+  +L IP+KFVR+YG    + + +     A G  W V L + ND
Sbjct: 9   SQTPHFFKIVLSDALQNGRLGIPKKFVRKYG---SSLSDLVFLHLASGDVWEVELLRGND 68

Query: 79  GTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICID 138
           G    F   GW  FV+ Y++   +FLVF+YE   S+F VVIFD++ATEI+YP   ++  +
Sbjct: 69  GA---FLRRGWPDFVKHYAIEHGHFLVFRYE-GGSAFRVVIFDKSATEIKYP---LVSEN 128

Query: 139 DAEEKVKKETNISQELMDNKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHIH 198
           D     +   + S E+ ++     S   S++ +A+  AT+FQS   NP FL  M PS I 
Sbjct: 129 DDPRMEEDVGDASVEVFED----HSDQVSEKSEALERATSFQSP--NPFFLAIMQPSFIR 175

Query: 199 RSL 202
             L
Sbjct: 189 HCL 175

[Close]

BLAST of MELO3C020923 vs. TrEMBL
Match: A0A059CCB4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00268 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19
Identity = 75/211 (35.55%), Postives = 118/211 (55.92%), Query Frame = 1


Query: 2   GSSSRPKNDVVKQPCKASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLK 61
           G  + P+ D    P     +PHFFK+V +RAL+  KL IP+ F+R YG     +  + LK
Sbjct: 13  GGGAEPEMD----PGSPPSSPHFFKIVLSRALESGKLGIPKSFLRRYGKD--LSGLVLLK 72

Query: 62  VAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFD 121
           V   G  W V+L K++DG +VW    GW+ F+E YS+G  + LVFKYE   S F+V+IFD
Sbjct: 73  VPG-GSTWPVKLEKSDDG-KVWLW-KGWRGFMEHYSIGHGHLLVFKYE-GDSVFHVIIFD 132

Query: 122 RTATEIEYPMKIIICIDDAEEKV--KKETNISQELMDNKKKL----RSTTTSQREKAM-- 181
           ++A+EI+YP  I   +   EE+   +KE ++  E+ D++  +     S+  S RE  +  
Sbjct: 133 KSASEIDYPSSIESDMSSPEEEFLSRKEEDV-VEIKDSEGSVPCSQPSSYRSSREYGVPS 192

Query: 182 ---ANATAFQSMTINPSFLCKMSPSHIHRSL 202
              A   A +  + +P F   + P+++ +SL
Sbjct: 193 HLAAFELASEFKSDHPFFKVVIQPTYVRKSL 212

[Close]

BLAST of MELO3C020923 vs. TrEMBL
Match: A0A059CBR1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00268 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19
Identity = 75/211 (35.55%), Postives = 118/211 (55.92%), Query Frame = 1


Query: 2   GSSSRPKNDVVKQPCKASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLK 61
           G  + P+ D    P     +PHFFK+V +RAL+  KL IP+ F+R YG     +  + LK
Sbjct: 13  GGGAEPEMD----PGSPPSSPHFFKIVLSRALESGKLGIPKSFLRRYGKD--LSGLVLLK 72

Query: 62  VAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFD 121
           V   G  W V+L K++DG +VW    GW+ F+E YS+G  + LVFKYE   S F+V+IFD
Sbjct: 73  VPG-GSTWPVKLEKSDDG-KVWLW-KGWRGFMEHYSIGHGHLLVFKYE-GDSVFHVIIFD 132

Query: 122 RTATEIEYPMKIIICIDDAEEKV--KKETNISQELMDNKKKL----RSTTTSQREKAM-- 181
           ++A+EI+YP  I   +   EE+   +KE ++  E+ D++  +     S+  S RE  +  
Sbjct: 133 KSASEIDYPSSIESDMSSPEEEFLSRKEEDV-VEIKDSEGSVPCSQPSSYRSSREYGVPS 192

Query: 182 ---ANATAFQSMTINPSFLCKMSPSHIHRSL 202
              A   A +  + +P F   + P+++ +SL
Sbjct: 193 HLAAFELASEFKSDHPFFKVVIQPTYVRKSL 212

[Close]

BLAST of MELO3C020923 vs. TrEMBL
Match: A0A059CD82_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00268 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19
Identity = 75/211 (35.55%), Postives = 118/211 (55.92%), Query Frame = 1


Query: 2   GSSSRPKNDVVKQPCKASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLK 61
           G  + P+ D    P     +PHFFK+V +RAL+  KL IP+ F+R YG     +  + LK
Sbjct: 13  GGGAEPEMD----PGSPPSSPHFFKIVLSRALESGKLGIPKSFLRRYGKD--LSGLVLLK 72

Query: 62  VAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFD 121
           V   G  W V+L K++DG +VW    GW+ F+E YS+G  + LVFKYE   S F+V+IFD
Sbjct: 73  VPG-GSTWPVKLEKSDDG-KVWLW-KGWRGFMEHYSIGHGHLLVFKYE-GDSVFHVIIFD 132

Query: 122 RTATEIEYPMKIIICIDDAEEKV--KKETNISQELMDNKKKL----RSTTTSQREKAM-- 181
           ++A+EI+YP  I   +   EE+   +KE ++  E+ D++  +     S+  S RE  +  
Sbjct: 133 KSASEIDYPSSIESDMSSPEEEFLSRKEEDV-VEIKDSEGSVPCSQPSSYRSSREYGVPS 192

Query: 182 ---ANATAFQSMTINPSFLCKMSPSHIHRSL 202
              A   A +  + +P F   + P+++ +SL
Sbjct: 193 HLAAFELASEFKSDHPFFKVVIQPTYVRKSL 212

[Close]

BLAST of MELO3C020923 vs. TAIR10
Match: AT4G01580.1 (AT4G01580.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13
Identity = 40/122 (32.79%), Postives = 71/122 (58.20%), Query Frame = 1


Query: 24  FFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVW 83
           FFK+V    +K++ + IP +FV+  G K    +++   V   G K +++L +   G  +W
Sbjct: 30  FFKLVLPSTMKDKMMRIPPRFVKLQGSKL---SEVVTLVTPAGYKRSIKLKRI--GEEIW 89

Query: 84  FHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEK 143
           FH+ GW  F E +S+   +FL+F+Y++ +SSF V+IF+ +A E  YP+  +  ID  ++ 
Sbjct: 90  FHE-GWSEFAEAHSIEEGHFLLFEYKK-NSSFRVIIFNASACETNYPLDAVHIIDSDDDV 144

Query: 144 VK 146
           ++
Sbjct: 150 IE 144

[Close]

BLAST of MELO3C020923 vs. TAIR10
Match: AT3G18960.1 (AT3G18960.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 73.2 bits (178), Expect = 2.2e-13
Identity = 51/177 (28.81%), Postives = 92/177 (51.98%), Query Frame = 1


Query: 24  FFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVW 83
           FFK+V    +K++ ++IP +FV+  G K   +  + L+  A G K +++L +   G  +W
Sbjct: 30  FFKLVLPSTMKDKMMKIPPRFVKLQGSKL--SEVVTLETPA-GFKRSIKLKRI--GEEIW 89

Query: 84  FHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEK 143
           FH+ GW  F E +S+   +FL+F+Y +++SSF V+IF+ +A E +YP+  +  ID  ++ 
Sbjct: 90  FHE-GWSEFAEAHSIEEGHFLLFEY-KENSSFRVIIFNVSACETKYPLDAVHIIDSDDDI 149

Query: 144 VK---KETNISQELMDNKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHI 198
           +    KE   +Q    N + +    T  + K  +       +  +   L  M+P H+
Sbjct: 150 IDITGKEFVGTQGTRKNNQSVNGGDTEHKSKKRSRDIELDKILHD---LDVMNPMHV 196

[Close]

BLAST of MELO3C020923 vs. TAIR10
Match: AT3G18990.1 (AT3G18990.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 71.6 bits (174), Expect = 6.3e-13
Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 1


Query: 22  PHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTR 81
           P F K++ +  ++E++L +P KFV ++  K   +  + L V  DG  W V L K ++  +
Sbjct: 4   PFFHKLIFSSTIQEKRLRVPDKFVSKF--KDELSVAVALTVP-DGHVWRVGLRKADN--K 63

Query: 82  VWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEY 130
           +WF D GWQ FV+ YS+ + Y L+F+YE  +S+F V IF+ + +EI Y
Sbjct: 64  IWFQD-GWQEFVDRYSIRIGYLLIFRYE-GNSAFSVYIFNLSHSEINY 104

[Close]

BLAST of MELO3C020923 vs. TAIR10
Match: AT1G49475.1 (AT1G49475.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 1


Query: 24  FFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVW 83
           F K++    + E+ +++P +FVR +G K   T+ + L+    G K ++R+ +  D   VW
Sbjct: 34  FIKIILLSRIIEKMMKVPARFVR-FGPKL--TDNVTLQTPV-GFKRSIRIKRIGD--EVW 93

Query: 84  FHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEK 143
           F + GW  F E +S+   +FL F YE  S  F VVIFD +A+EIEYP+      DD  E+
Sbjct: 94  F-EKGWSEFAEAHSLSDGHFLFFHYEGDSC-FRVVIFDVSASEIEYPLD---DTDDNREE 143

Query: 144 V 145
           V
Sbjct: 154 V 143

[Close]

BLAST of MELO3C020923 vs. TAIR10
Match: AT4G31680.1 (AT4G31680.1 Transcriptional factor B3 family protein)

HSP 1 Score: 52.0 bits (123), Expect = 5.1e-07
Identity = 41/140 (29.29%), Postives = 67/140 (47.86%), Query Frame = 1


Query: 21  NPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGT 80
           N HFFK +      ++ L IP KF  E+         + L+  A  R W V++    DG 
Sbjct: 11  NKHFFKPLLPGF--QRNLNIPVKFFSEHIEGKHEGETVKLRADASKRTWEVKM----DGN 70

Query: 81  RVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDA 140
           R+    +GW+ FVE + + +  F+VF++E     F+V     +  EI+YP    I  ++ 
Sbjct: 71  RL---TEGWKEFVEAHDLRIRDFVVFRHE-GDMVFHVTALGPSCCEIQYPQS--ISHEEG 130

Query: 141 EEKVKKETNISQELMDNKKK 161
           EE  + E +  +E+ +N +K
Sbjct: 131 EESGEVEIS-EREVEENLQK 137

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BLAST of MELO3C020923 vs. NCBI nr
Match: gi|659116202|ref|XP_008457960.1| (PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo])

HSP 1 Score: 408.7 bits (1049), Expect = 6.1e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1


Query: 1   MGSSSRPKNDVVKQPCKASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICL 60
           MGSSSRPKNDVVKQPCKASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICL
Sbjct: 278 MGSSSRPKNDVVKQPCKASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICL 337

Query: 61  KVAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIF 120
           KVAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIF
Sbjct: 338 KVAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIF 397

Query: 121 DRTATEIEYPMKIIICIDDAEEKVKKETNISQELMDNKKKLRSTTTSQREKAMANATAFQ 180
           DRTATEIEYPMKIIICIDDAEEKVKKETNISQELMDNKKKLRSTTTSQREKAMANATAFQ
Sbjct: 398 DRTATEIEYPMKIIICIDDAEEKVKKETNISQELMDNKKKLRSTTTSQREKAMANATAFQ 457

Query: 181 SMTINPSFLCKMSPSHIHRSL 202
           SMTINPSFLCKMSPSHIHRSL
Sbjct: 458 SMTINPSFLCKMSPSHIHRSL 478

[Close]

BLAST of MELO3C020923 vs. NCBI nr
Match: gi|659116202|ref|XP_008457960.1| (PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo])

HSP 1 Score: 116.3 bits (290), Expect = 6.3e-23
Identity = 60/137 (43.80%), Postives = 91/137 (66.42%), Query Frame = 1


Query: 18  ASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTN 77
           +S  PHFFKV+  + L ++KLE+P+KFVR+YG +A    ++ LK+   G KW V L K+N
Sbjct: 5   SSSMPHFFKVILPQTLTQKKLEVPKKFVRKYG-EALKAEEVWLKIMVSGAKWKVGLKKSN 64

Query: 78  DGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICI 137
           +  +VWF + GW+ FV+F+S+   +FL F+YE  +S F VVIFD+TATEIEYP+      
Sbjct: 65  E--KVWF-EKGWEEFVKFHSIDYGHFLTFRYE-GNSCFQVVIFDQTATEIEYPISFKNQF 124

Query: 138 DDAEEKVKKETNISQEL 155
           D+ +   +K  ++ + L
Sbjct: 125 DNKKMFEEKRKSVQETL 136

HSP 2 Score: 321.2 bits (822), Expect = 1.3e-84
Identity = 163/202 (80.69%), Postives = 177/202 (87.62%), Query Frame = 1


Query: 9   NDVVKQPCKASDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRK 68
           N+VVK+P KA D+PHFFKVV A ALK+QKLEIP KFVREYGVKAFATNQICLKVAADGRK
Sbjct: 9   NNVVKRPRKALDSPHFFKVVMASALKDQKLEIPTKFVREYGVKAFATNQICLKVAADGRK 68

Query: 69  WNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIE 128
           WNV LTK+NDGTRVWFHD GWQ FVEFYSVGLEYFLVFKYE QSSSFYVVIFDRTATEIE
Sbjct: 69  WNVGLTKSNDGTRVWFHDHGWQTFVEFYSVGLEYFLVFKYECQSSSFYVVIFDRTATEIE 128

Query: 129 YPMKIIICIDDAEEKVKKETNISQ------------ELMDNKKKLRSTTTSQREKAMANA 188
           YP+K IIC+DDAEEKVKKET+ISQ            ELMDNKKKL  TTT+QRE+AMA+A
Sbjct: 129 YPIK-IICLDDAEEKVKKETHISQDSKTGEVNFGAVELMDNKKKLWPTTTNQRERAMASA 188

Query: 189 TAFQSMTINPSFLCKMSPSHIH 199
           +AFQSMT+NPSF+CKMS SHIH
Sbjct: 189 SAFQSMTLNPSFMCKMSTSHIH 209

[Close]

BLAST of MELO3C020923 vs. NCBI nr
Match: gi|659116200|ref|XP_008457959.1| (PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo])

HSP 1 Score: 228.4 bits (581), Expect = 1.1e-56
Identity = 126/214 (58.88%), Postives = 150/214 (70.09%), Query Frame = 1


Query: 3   SSSRPKNDVVKQPCKAS-DNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLK 62
           SS    N +VKQP KA   NPHFFKVV   ALKEQKLEIPRKFVREYG++A   +Q+CLK
Sbjct: 4   SSHHQPNSIVKQPDKALLHNPHFFKVVLDDALKEQKLEIPRKFVREYGLQALLKDQVCLK 63

Query: 63  VAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFD 122
           V  DG++WNV LTK+N+GTRVWFH  GW+  VEFYSV   YFLVFKYE QSSS YVVIFD
Sbjct: 64  VR-DGKEWNVGLTKSNNGTRVWFHY-GWEKLVEFYSVKSGYFLVFKYENQSSSLYVVIFD 123

Query: 123 RTATEIEYPMKIIICIDDAEEKVKKETNISQEL---------------MDNKKKLRSTTT 182
           RTATEIEYP+K  I +D ++E+VK ET    +L                 N +    +T 
Sbjct: 124 RTATEIEYPVK-KISLDKSKERVKMETYFDDDLDLDFKDGDLSFGVKKPTNSRWKPPSTG 183

Query: 183 SQREKAMANATAFQSMTINPSFLCKMSPSHIHRS 201
           SQ+ +AMA A  FQSMT+NPSF+CK+ PSHIHR+
Sbjct: 184 SQQARAMAKANRFQSMTLNPSFICKVWPSHIHRT 214

[Close]

BLAST of MELO3C020923 vs. NCBI nr
Match: gi|700206924|gb|KGN62043.1| (hypothetical protein Csa_2G292240 [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-43
Identity = 101/178 (56.74%), Postives = 121/178 (67.98%), Query Frame = 1


Query: 39  EIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSV 98
           EIPRKFVREYG+KA   +QICLKV  DG++WNV LTK+N+GTRVW H  GW+  V FYSV
Sbjct: 3   EIPRKFVREYGLKALLKDQICLKVR-DGKEWNVGLTKSNNGTRVWLHY-GWEKLVGFYSV 62

Query: 99  GLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEKVKKETNISQELMD-- 158
              YFLVFKYE  S SFYVVIFD TATEIEYP+K    +D A+EKVK ET    + +D  
Sbjct: 63  KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVK-KTRLDKAKEKVKMETYFDDDCLDLD 122

Query: 159 --------------NKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHIHRS 201
                         N +    +T SQ+ +AMA A  FQSMT+NPSF+CK+ PSHIHR+
Sbjct: 123 FKDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRT 177

[Close]

BLAST of MELO3C020923 vs. NCBI nr
Match: gi|629093291|gb|KCW59286.1| (hypothetical protein EUGRSUZ_H01965 [Eucalyptus grandis])

HSP 1 Score: 108.2 bits (269), Expect = 1.7e-20
Identity = 71/183 (38.80%), Postives = 103/183 (56.28%), Query Frame = 1


Query: 19  SDNPHFFKVVSARALKEQKLEIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTND 78
           S  PHFFK+V + AL+  +L IP+KFVR+YG    + + +     A G  W V L + ND
Sbjct: 9   SQTPHFFKIVLSDALQNGRLGIPKKFVRKYG---SSLSDLVFLHLASGDVWEVELLRGND 68

Query: 79  GTRVWFHDDGWQMFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICID 138
           G    F   GW  FV+ Y++   +FLVF+YE   S+F VVIFD++ATEI+YP   ++  +
Sbjct: 69  GA---FLRRGWPDFVKHYAIEHGHFLVFRYE-GGSAFRVVIFDKSATEIKYP---LVSEN 128

Query: 139 DAEEKVKKETNISQELMDNKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHIH 198
           D     +   + S E+ ++     S   S++ +A+  AT+FQS   NP FL  M PS I 
Sbjct: 129 DDPRMEEDVGDASVEVFED----HSDQVSEKSEALERATSFQSP--NPFFLAIMQPSFIR 175

Query: 199 RSL 202
             L
Sbjct: 189 HCL 175

The following BLAST results are available for this feature:

BLAST of MELO3C020923 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y4158_ARATH	2.2e-12	32.79	B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2...	[more]
Y3896_ARATH	3.8e-12	28.81	B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana GN=At3g18960 PE=2...	[more]
VRN1_ARATH	1.1e-11	37.96	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 P...	[more]
Y1475_ARATH	2.3e-09	37.19	B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana GN=At1g49475 PE=2...	[more]
REM8_ARATH	9.1e-06	29.29	B3 domain-containing protein REM8 OS=Arabidopsis thaliana GN=REM8 PE=2 SV=1	[more]

BLAST of MELO3C020923 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJV0_CUCSA	7.7e-44	56.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292240 PE=4 SV=1	[more]
A0A059B061_EUCGR	1.2e-20	38.80	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01965 PE=4 SV=1	[more]
A0A059CCB4_EUCGR	1.3e-19	35.55	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00268 PE=4 SV=1	[more]
A0A059CBR1_EUCGR	1.3e-19	35.55	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00268 PE=4 SV=1	[more]
A0A059CD82_EUCGR	1.3e-19	35.55	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00268 PE=4 SV=1	[more]

BLAST of MELO3C020923 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G01580.1	1.3e-13	32.79	AP2/B3-like transcriptional factor family protein	[more]
AT3G18960.1	2.2e-13	28.81	AP2/B3-like transcriptional factor family protein	[more]
AT3G18990.1	6.3e-13	37.96	AP2/B3-like transcriptional factor family protein	[more]
AT1G49475.1	1.3e-10	37.19	AP2/B3-like transcriptional factor family protein	[more]
AT4G31680.1	5.1e-07	29.29	Transcriptional factor B3 family protein	[more]

BLAST of MELO3C020923 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659116202\|ref\|XP_008457960.1\|	6.1e-111	100.00	PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo]	[more]
gi\|659116202\|ref\|XP_008457960.1\|	6.3e-23	43.80	PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo]	[more]
gi\|659116200\|ref\|XP_008457959.1\|	1.1e-56	58.88	PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo]	[more]
gi\|700206924\|gb\|KGN62043.1\|	1.1e-43	56.74	hypothetical protein Csa_2G292240 [Cucumis sativus]	[more]
gi\|629093291\|gb\|KCW59286.1\|	1.7e-20	38.80	hypothetical protein EUGRSUZ_H01965 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003340	B3_DNA-bd
IPR015300	DNA-bd_pseudobarrel_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020923T1	MELO3C020923T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 24..122 score: 1.8
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 24..123 score: 2.0
IPR003340	B3 DNA binding domain	PROFILE	PS50863	B3	coord: 23..123 score: 11
IPR015300	DNA-binding pseudobarrel domain	GENE3D	G3DSA:2.40.330.10		coord: 19..123 score: 7.0
IPR015300	DNA-binding pseudobarrel domain	unknown	SSF101936	DNA-binding pseudobarrel domain	coord: 19..130 score: 4.12
None	No IPR available	unknown	Coil	Coil	coord: 137..157 scor
None	No IPR available	PANTHER	PTHR31674	FAMILY NOT NAMED	coord: 8..201 score: 1.5
None	No IPR available	PANTHER	PTHR31674:SF1	SUBFAMILY NOT NAMED	coord: 8..201 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C020923	Csa2G292240	Cucumber (Chinese Long) v2	cumeB099
MELO3C020923	Cla020158	Watermelon (97103) v1	mewmB120
MELO3C020923	ClCG02G013090	Watermelon (Charleston Gray)	mewcgB106
MELO3C020923	Cla97C02G038780	Watermelon (97103) v2	mewmbB108
MELO3C020923	Bhi10G001813	Wax gourd	mewgoB129
MELO3C020923	CSPI02G14630	Wild cucumber (PI 183967)	cpimeB098
MELO3C020923	Cucsa.366500	Cucumber (Gy14) v1	cgymeB596
MELO3C020923	CmaCh02G005670	Cucurbita maxima (Rimu)	cmameB554
MELO3C020923	CmaCh20G011380	Cucurbita maxima (Rimu)	cmameB492
MELO3C020923	CmaCh03G010080	Cucurbita maxima (Rimu)	cmameB590
MELO3C020923	CmoCh02G005760	Cucurbita moschata (Rifu)	cmomeB544
MELO3C020923	CmoCh03G010140	Cucurbita moschata (Rifu)	cmomeB579
MELO3C020923	CmoCh20G011710	Cucurbita moschata (Rifu)	cmomeB485
MELO3C020923	Lsi10G005980	Bottle gourd (USVL1VR-Ls)	lsimeB054
MELO3C020923	Cp4.1LG16g00420	Cucurbita pepo (Zucchini)	cpemeB259
MELO3C020923	Cp4.1LG05g11150	Cucurbita pepo (Zucchini)	cpemeB660
MELO3C020923	CsGy2G014630	Cucumber (Gy14) v2	cgybmeB085
MELO3C020923	Carg20931	Silver-seed gourd	carmeB0967
MELO3C020923	Carg00868	Silver-seed gourd	carmeB0403
MELO3C020923	CsaV3_2G017190	Cucumber (Chinese Long) v3	cucmeB102

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C020923	Cucurbita maxima (Rimu)	cmameB546
MELO3C020923	Cucurbita moschata (Rifu)	cmomeB547
MELO3C020923	Cucurbita pepo (Zucchini)	cpemeB663
MELO3C020923	Silver-seed gourd	carmeB1028