Cp4.1LG05g11150 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g11150
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionB3 domain-containing transcription factor VRN1
LocationCp4.1LG05 : 7537156 .. 7538712 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTCTTCACTTCACCGATTCCCCATTTCTTCAAGATCATTCTCCACCACACTCTCATCGAAAGAAAGCTTGTAAGCAACCTAATCCAATCCACATTCTCTCTGATCTTTTCATTTTCTTATCAATTTCTTTTTTGCAGGATCTTCCAAACAAGTTTGTTATCAACAATCGCGCTTCTTTGCTACACAACAGCGCCACTCTCAGCCTTCCGGACGGCGCAAACTGGGAGGTCGAACTCAAGAAATCGGATGGCAAAGTATCCTTCGCAAGAGGCTGGCCGGAGTTCGTGGAGTTTTACAATGTGAAAGCTGGATATTTCGTGGTTTTCAGATTGGAAGGAAATCGGTGCTTCAATGTTCTCATTTTCGACTTGAGTGCTACGGAAGTCGATTATCCGATCAAGCCGAGGATCTTCCGCCGGCTACGTAAGGATCGCAACATAGCCTTCGATCGCCGCCCGCCGATTCTGCTTCCGAAGAGCGAGAACGAAGATGAGGACGACTCTGTTGTTGTGTTAAACGACGCCGTTTCGAGGAAGAGGAAAAGAGAAAAAGATCACGAAGCTGCCTTTTGTTCCCTACGCGAGATGAAGAAGATGATGAGGACGAACATGAAGATAAAGCATCAACGATTCACTACACCTCAACGATTCAGCGATGATGATGAAGAAGACGAAGACGAAGACGAAGAAGAAGAAGAAGACGAAGAAGACGACGAAGAAGAAGATTACTCGTGGAGACGGAGGAAGTACAGAGGATCAGGTTCGTTCGCAAAAACTCTATAAATTTCAATTTCAATTTCAGCAAGCGGTACTAAAATTGGATGAATTCTCACCGATTTCAGCGCGTAATCACGAAGACGGCGGCCGATTCAGTCCAGAATCGATGAGACCTATGCATCCTCCAAGGACGCCGAAGCCATTAACGGAGAATCAAGATCGAGTTCTGAGAATAGCGAGTTCGTTCAAATTGAGGACGAAGAATCCTTCATTCATGGTAACGATGAGGCCTTCCTACATCCAAACAGGAAATTACCTGGTAAGAAGAAAACAGCGAAATGAAATGATTCTCAATTGAAACAGTGATTGAACAATGATTTCTGAAATGCGTAGAGTTTGCCGAGAAGCTTTGCGGAGAGGTACCTGCAAGAATCGACGGACGTGAAGCTGGAAGTGGCGGACGGGAGGATTTGGAGCGTGTGGTGCGGTGTACGGTGGGCGTTTACGAGGCGGCGGACGGAGTTGAAATGCGGTTGGAAGAGATTCGCTGTGGATAATCAGTTGAAGGAAGGGGACGTGTGTGTGTTCGAATTGATGAACAGAATCCCCAAAGTGTTCTTCAAAGTCACTATTTTCCGGCGACCGGCGAACTGAATTCATCATTTTCCTGCTTTTTCTATTTCTTTTTATTGGCTCCCTTACTGCTTCAACCCGTGACTGTTTAACCTTACCCTACATACGTCACAGGCACATATAGAATTTCAGTTTAGCTATAAATGCTTTTTGTTAGGTGGTCCCGTCAAATCGTATTTTCATAAATAATAATAATCCAAAA

mRNA sequence

ATGGCTTTCTTCACTTCACCGATTCCCCATTTCTTCAAGATCATTCTCCACCACACTCTCATCGAAAGAAAGCTTGATCTTCCAAACAAGTTTGTTATCAACAATCGCGCTTCTTTGCTACACAACAGCGCCACTCTCAGCCTTCCGGACGGCGCAAACTGGGAGGTCGAACTCAAGAAATCGGATGGCAAAGTATCCTTCGCAAGAGGCTGGCCGGAGTTCGTGGAGTTTTACAATGTGAAAGCTGGATATTTCGTGGTTTTCAGATTGGAAGGAAATCGGTGCTTCAATGTTCTCATTTTCGACTTGAGTGCTACGGAAGTCGATTATCCGATCAAGCCGAGGATCTTCCGCCGGCTACCGCGTAATCACGAAGACGGCGGCCGATTCAGTCCAGAATCGATGAGACCTATGCATCCTCCAAGGACGCCGAAGCCATTAACGGAGAATCAAGATCGAGTTCTGAGAATAGCGAGTTCGTTCAAATTGAGGACGAAGAATCCTTCATTCATGGTAACGATGAGGCCTTCCTACATCCAAACAGGAAATTACCTGAGTTTGCCGAGAAGCTTTGCGGAGAGGTACCTGCAAGAATCGACGGACGTGAAGCTGGAAGTGGCGGACGGGAGGATTTGGAGCGTGTGGTGCGGTGTACGGTGGGCGTTTACGAGGCGGCGGACGGAGTTGAAATGCGGTTGGAAGAGATTCGCTGTGGATAATCAGTTGAAGGAAGGGGACGTGTGTGTGTTCGAATTGATGAACAGAATCCCCAAAGTGTTCTTCAAAGTCACTATTTTCCGGCGACCGGCGAACTGAATTCATCATTTTCCTGCTTTTTCTATTTCTTTTTATTGGCTCCCTTACTGCTTCAACCCGTGACTGTTTAACCTTACCCTACATACGTCACAGGCACATATAGAATTTCAGTTTAGCTATAAATGCTTTTTGTTAGGTGGTCCCGTCAAATCGTATTTTCATAAATAATAATAATCCAAAA

Coding sequence (CDS)

ATGGCTTTCTTCACTTCACCGATTCCCCATTTCTTCAAGATCATTCTCCACCACACTCTCATCGAAAGAAAGCTTGATCTTCCAAACAAGTTTGTTATCAACAATCGCGCTTCTTTGCTACACAACAGCGCCACTCTCAGCCTTCCGGACGGCGCAAACTGGGAGGTCGAACTCAAGAAATCGGATGGCAAAGTATCCTTCGCAAGAGGCTGGCCGGAGTTCGTGGAGTTTTACAATGTGAAAGCTGGATATTTCGTGGTTTTCAGATTGGAAGGAAATCGGTGCTTCAATGTTCTCATTTTCGACTTGAGTGCTACGGAAGTCGATTATCCGATCAAGCCGAGGATCTTCCGCCGGCTACCGCGTAATCACGAAGACGGCGGCCGATTCAGTCCAGAATCGATGAGACCTATGCATCCTCCAAGGACGCCGAAGCCATTAACGGAGAATCAAGATCGAGTTCTGAGAATAGCGAGTTCGTTCAAATTGAGGACGAAGAATCCTTCATTCATGGTAACGATGAGGCCTTCCTACATCCAAACAGGAAATTACCTGAGTTTGCCGAGAAGCTTTGCGGAGAGGTACCTGCAAGAATCGACGGACGTGAAGCTGGAAGTGGCGGACGGGAGGATTTGGAGCGTGTGGTGCGGTGTACGGTGGGCGTTTACGAGGCGGCGGACGGAGTTGAAATGCGGTTGGAAGAGATTCGCTGTGGATAATCAGTTGAAGGAAGGGGACGTGTGTGTGTTCGAATTGATGAACAGAATCCCCAAAGTGTTCTTCAAAGTCACTATTTTCCGGCGACCGGCGAACTGA

Protein sequence

MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNSATLSLPDGANWEVELKKSDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEVDYPIKPRIFRRLPRNHEDGGRFSPESMRPMHPPRTPKPLTENQDRVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRPAN
Homology
[Close]
BLAST of Cp4.1LG05g11150 vs. Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.2e-19
Identity = 55/152 (36.18%), Postives = 83/152 (54.61%), Query Frame = 1 

Query: 7   PIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNSATLSLPDGANWEVELKKSDGKVS 66
           P P F K+I   T+ E++L +P+KFV   +  L   +  L++PDG  W V L+K+D K+ 
Sbjct: 2   PRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDEL-SVAVALTVPDGHVWRVGLRKADNKIW 61

Query: 67  FARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEVDYPI------------KP 126
           F  GW EFV+ Y+++ GY ++FR EGN  F+V IF+LS +E++Y              + 
Sbjct: 62  FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRA 121

Query: 127 RIFRRLPRNHEDGGRFSPESMRPMHPPRTPKP 147
           R+F  L    ED     P S+ P   P +  P
Sbjct: 122 RLFEDL--EDEDAEVIFPSSVYPSPLPESTVP 150

[Close]
BLAST of Cp4.1LG05g11150 vs. Swiss-Prot
Match: Y4469_ORYSJ (Putative B3 domain-containing protein Os04g0346900 OS=Oryza sativa subsp. japonica GN=Os04g0346900 PE=3 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 3.4e-16
Identity = 77/284 (27.11%), Postives = 124/284 (43.66%), Query Frame = 1 

Query: 5   TSPIPHFFKIILHHTLIERKLDLPNKFVIN--NRASLLHNSATLSLPDGANWEVELKKSD 64
           TS  P F  ++L    I  K+ +P+KFV +     +L  N A +  P G +W VEL K  
Sbjct: 137 TSRKPQFLTVLLPG--IMDKMRIPDKFVRDYITGENLNSNMAIILSPLGKSWRVELDKDQ 196

Query: 65  GKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEVDYPIK--------- 124
             V    GW +F+ F+ +  G  V+FR EGN  F + +F  +  + D+  K         
Sbjct: 197 SGVFLGGGWLQFLSFHGISRGDVVIFRYEGNLVFKISVFGPNGRQKDFKAKGISIYQGTG 256

Query: 125 ----PRIFRRLPRNHEDGGRFSPESMRPMHPPRTPKPL-----TENQD--RVLRIASSFK 184
                  F R   N++   RF  +       P + K       T +++  R+ +  S ++
Sbjct: 257 EQQEAPSFSRRKCNNKKKSRFGEDDGNQQEMPCSRKGSGNKGRTSDRETKRMRKTRSVYE 316

Query: 185 LRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERY-LQESTDVKLEVAD------GRIWSVW 244
           +  +  S++      Y+     LSL R+F E   L E + + L + D       +  S  
Sbjct: 317 IGPR--SWIKKEINEYVLERCILSLARTFCESIGLVEESSITLMMIDTTSTQGDQGGSSS 376

Query: 245 CGVRWAFTRRRTELKC-----GWKRFAVDNQLKEGDVCVFELMN 255
               W  T RR +  C     GW+RF  DN ++ GDVCVF +++
Sbjct: 377 SSRSWEVTGRRYKDACYLLGAGWRRFCEDNGVRSGDVCVFTVLD 416

[Close]
BLAST of Cp4.1LG05g11150 vs. Swiss-Prot
Match: Y3123_ORYSJ (B3 domain-containing protein Os03g0212300 OS=Oryza sativa subsp. japonica GN=Os03g0212300 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.7e-15
Identity = 70/255 (27.45%), Postives = 107/255 (41.96%), Query Frame = 1 

Query: 11  FFKIILHHTLIERKLDLPNKFVINNRASLLHNSATLSLPDGAN-WEVELKKSD--GKVSF 70
           FF+IIL  +  + KL LP KF        L  +      +G   W+V++   D  G V  
Sbjct: 15  FFRIILPGSS-KTKLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYL 74

Query: 71  ARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEVDYPIKPRIFRRLPRNHEDG 130
            RGW EF   ++++ G+F+VFR +G   F V +FD +    DY           R H D 
Sbjct: 75  GRGWQEFARAHDLRDGHFLVFRYDGAAAFTVTVFDETMCRRDY-----------RRHHDA 134

Query: 131 GRFSPESMRPMHPPRTPKPLTENQDRVLRIASSFKLRTKN---PSFMVTMRPSYIQ--TG 190
                 S             +++ D    +A++      +     F VT+R   ++    
Sbjct: 135 AESGSSSS------------SDSSDAAAAVATAAAEGVGDVALSQFAVTLRQCNLEDKQA 194

Query: 191 NYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRR----RTELKCGWKRFAV 250
            YL++P  F E +     +  +    G  W+    VR   +RR    RT  + GW RF V
Sbjct: 195 QYLNVPMEFQEAHEYARREKVVLRMRGEAWT----VRLKHSRRERGQRTAFRYGWHRFCV 241

Query: 251 DNQLKEGDVCVFELM 254
           DN L  GD C F ++
Sbjct: 255 DNGLAVGDTCFFRVL 241

[Close]
BLAST of Cp4.1LG05g11150 vs. Swiss-Prot
Match: Y1475_ARATH (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 8.3e-15
Identity = 39/105 (37.14%), Postives = 64/105 (60.95%), Query Frame = 1 

Query: 8   IPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNSATLSLPDGANWEVELKKSDGKVSF 67
           +  F KIIL   +IE+ + +P +FV       L ++ TL  P G    + +K+   +V F
Sbjct: 31  VKKFIKIILLSRIIEKMMKVPARFV--RFGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWF 90

Query: 68  ARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEVDYPI 113
            +GW EF E +++  G+F+ F  EG+ CF V+IFD+SA+E++YP+
Sbjct: 91  EKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPL 133

[Close]
BLAST of Cp4.1LG05g11150 vs. Swiss-Prot
Match: Y3160_ORYSJ (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica GN=Os03g0621600 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.8e-14
Identity = 69/267 (25.84%), Postives = 117/267 (43.82%), Query Frame = 1 

Query: 27  LPNKFVINNRASLLHNSATLSLPDGANWEVELKKSDGKVSFARGWPEFVEFYNVKAGYFV 86
           +PN+F ++N    +  S  L    G  ++V++ K+ G+V    GW  +V  +++K G F+
Sbjct: 46  IPNEF-LHNFGGKIPKSIKLETRSGLTFDVQVTKNSGRVVLQSGWASYVSAHDLKIGDFL 105

Query: 87  VFRLEGNRCFNVLIFDLSATE--VDYPI--KPRIFRRLPRNHEDGGRFSPESMRPMHPPR 146
           VF+  G+     LIFD S  E   + P+    R +    RN +D  +      R +    
Sbjct: 106 VFKYSGDSQLKTLIFDSSGCEKVCEKPVDMSGRSYDIAMRNSQDEKK--KRKQRDISRQG 165

Query: 147 TPKP--------------------LTENQDRVLRIASSFKLRTKNPSFMVTMRPSYIQ-T 206
           T KP                    LT  Q  +L I     + ++ P +   M  S I   
Sbjct: 166 TVKPSEEGLKAELVPGCILPSRTDLTRLQKNIL-IEKVKAINSETPIYGYVMNNSSIHGI 225

Query: 207 GNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQ 266
              + + + +A+ YL       +    G+ W+V C +    ++R  +   GW++FA DN+
Sbjct: 226 PCTVEISKKYADVYLPFEDGTVVLQHHGKSWNVRCCLTKQNSKRFLK---GWRQFAGDNK 285

Query: 267 LKEGDVCVFELMNRIPKVFFKVTIFRR 269
           L  GD+C+F+L+    K    V I RR
Sbjct: 286 LHLGDICLFDLLKDKKKYVMDVHIIRR 305

[Close]
BLAST of Cp4.1LG05g11150 vs. TrEMBL
Match: A0A0A0LM04_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287160 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 4.1e-61
Identity = 118/164 (71.95%), Postives = 133/164 (81.10%), Query Frame = 1 

Query: 107 EVDYPIKPRIFRRLPRNHEDGGRFSPESMRPMHPPRTPKPLTENQDRVLRIASSFKLRTK 166
           E DY  +   +R    N  + GR SPESMRPM+P +T + LTENQ  V+R ASSFK RTK
Sbjct: 191 ETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQLVVVRRASSFKCRTK 250

Query: 167 NPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRR 226
           NPSFMVTMRPSYIQTGN LSLPR F+ERY++ES DVKLEV DGRIW VWCGVRWAFTRRR
Sbjct: 251 NPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIWKVWCGVRWAFTRRR 310

Query: 227 TELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRPA 271
           TELK GWKRFAVDN+L+EGD+CVFELMN+ PKV F VTIFR P+
Sbjct: 311 TELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLPS 354

[Close]
BLAST of Cp4.1LG05g11150 vs. TrEMBL
Match: A0A0A0LMR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292230 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.4e-56
Identity = 112/163 (68.71%), Postives = 124/163 (76.07%), Query Frame = 1 

Query: 107 EVDYPIKPRIFRRLPRNHEDGGRFSPESMRPMHPPRTPKPLTENQDRVLRIASSFKLRTK 166
           E+D   +    R +  N  D GR SPESMRPM+P +TP  LTENQ  V + AS FK R  
Sbjct: 189 EMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRASWFKSRRN 248

Query: 167 NPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRR 226
           NPSFMVTMRPSYIQTGNYLSLPR F E+Y++ES DVKLEV DGR W VWCGVRWAFTRRR
Sbjct: 249 NPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRCWRVWCGVRWAFTRRR 308

Query: 227 TELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRP 270
           TELK GWKRFAVDN+LKEGD+CVFELM +   V FKV IFR P
Sbjct: 309 TELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLP 351

[Close]
BLAST of Cp4.1LG05g11150 vs. TrEMBL
Match: A0A067LCJ3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01468 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.8e-40
Identity = 110/295 (37.29%), Postives = 150/295 (50.85%), Query Frame = 1 

Query: 4   FTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNSATLSLPDGANWEVELKKSDG 63
           F +  PHFFK++L + L +RKL++P +FV     + L +S  L++P GA W+VEL K DG
Sbjct: 15  FKTHKPHFFKVVLDNALRDRKLEIPKEFV-RKYGNDLPSSVVLNVPTGAKWKVELFKCDG 74

Query: 64  KVSFARGWPEFVEFYNVKAGYFVVFRLE--GNRCFNVLIFDLSATEVDYPIKPRIFRRLP 123
           ++ F  GW EF E+Y++   YF+VF  +   N  FNVLI D SATE+DYP+         
Sbjct: 75  EIWFRNGWQEFAEYYSLAHSYFIVFEYDQHSNCHFNVLILDKSATEIDYPVNYNGDDEEI 134

Query: 124 RNHEDGGRFSPESMRPMHPPRT---PK---------------------PLTENQDRVLRI 183
            N E     SP     +  P T   PK                      L  ++  VL  
Sbjct: 135 NNLEKAENGSPHKKTKIEKPTTKFEPKRGDAEKPRKRKKFKKAVLKAQKLAHDEKEVLLQ 194

Query: 184 ASSFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQES-TDVKLEVADGRIWSVWC 243
            +     +KNP FMV M+ SY+  G  L +  SFA+R+L E   D  L+V DGR WS+  
Sbjct: 195 KARMVFYSKNPFFMVAMQSSYVHKGERLHISSSFAKRHLNEKHGDGTLKVMDGRTWSIRY 254

Query: 244 GVRWAFTRRRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRPAN 272
            V  +  R R  +  GW +F+ +N L+ GDVCVFEL N        VTI R   N
Sbjct: 255 HVETSRGRPRVLVYSGWNKFSRENHLEVGDVCVFELTNPAATT-MNVTILRYSKN 307

[Close]
BLAST of Cp4.1LG05g11150 vs. TrEMBL
Match: A0A059B061_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01965 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.0e-40
Identity = 107/268 (39.93%), Postives = 146/268 (54.48%), Query Frame = 1 

Query: 3   FFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNSATLSLPDGANWEVELKKSD 62
           +F S  PHFFKI+L   L   +L +P KFV     S L +   L L  G  WEVEL + +
Sbjct: 6   YFESQTPHFFKIVLSDALQNGRLGIPKKFV-RKYGSSLSDLVFLHLASGDVWEVELLRGN 65

Query: 63  GKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEVDYPIKPRIFRRLPR 122
                 RGWP+FV+ Y ++ G+F+VFR EG   F V+IFD SATE+ YP+        PR
Sbjct: 66  DGAFLRRGWPDFVKHYAIEHGHFLVFRYEGGSAFRVVIFDKSATEIKYPLVSE--NDDPR 125

Query: 123 NHEDGGRFSPESMRPMHPPRTPKPLTENQDRVLRIASSFKLRTKNPSFMVTMRPSYIQTG 182
             ED G  S E     H  +        +   L  A+SF  ++ NP F+  M+PS+I+  
Sbjct: 126 MEEDVGDASVEVFED-HSDQ-----VSEKSEALERATSF--QSPNPFFLAIMQPSFIR-- 185

Query: 183 NYLSLPRSFAERYL---QESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVD 242
           + LS P  F  +Y+   +   D+ L V+D R WSV         RR+ +  CGWKRF  D
Sbjct: 186 HCLSAPARFFMKYIPNFRSKGDIILYVSDERFWSVRYKFGIYGRRRQIKFNCGWKRFVQD 245

Query: 243 NQLKEGDVCVFELMNRIPKVFFKVTIFR 268
           N LK GDVCVFE+M ++ ++ F+V IFR
Sbjct: 246 NNLKLGDVCVFEIMWKVHQISFRVLIFR 260

[Close]
BLAST of Cp4.1LG05g11150 vs. TrEMBL
Match: A0A067L932_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01471 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 9.8e-39
Identity = 104/301 (34.55%), Postives = 157/301 (52.16%), Query Frame = 1 

Query: 2   AFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNSATLSLPDGANWEVELKKS 61
           +FF    PHFFKIIL  T+ + KL +P KF +    + L N   L +P GA W++EL K 
Sbjct: 12  SFFRPITPHFFKIILDDTIRDGKLIIPRKF-LREYGNNLPNKVVLKVPSGATWQIELMKC 71

Query: 62  DGKVSFARGWPEFVEFYNVKAGYFVVFRLEGN-RCFNVLIFDLSATEVDYPIK------- 121
           DG++   +GW EFVE+Y++  G+ +VF  E     F VLIFD SA+E+DYP         
Sbjct: 72  DGEICLQKGWQEFVEYYSIACGHLLVFEYEKTCHSFYVLIFDKSASEIDYPFSFTNGDNE 131

Query: 122 ---PRIFR----------------RLPRNHEDG-------GRFSPESMRPMHPPRTPKPL 181
              P I +                +L  + E          + S      + PP+     
Sbjct: 132 LKDPEIGKTEEESPLPFLHISKKVKLENSEEQSEEKKCHESKSSENQKENVVPPKIQSLT 191

Query: 182 TENQDRVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQE-STDVKLEV 241
            + +   LR A + K +++NP FMV M+PSY++  + +++  +FA +Y ++    V LE 
Sbjct: 192 AKGKASALRRAKT-KFKSRNPFFMVAMQPSYVRGRSKITISATFARKYFEKMQGKVILED 251

Query: 242 ADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIF 268
            +GR+WS     R     ++  +  GW++F+ DN+L+ GDVCVFEL+N   K   KVTIF
Sbjct: 252 GNGRVWS----ARHVRRGKKASIDNGWRKFSEDNELEVGDVCVFELVN-AAKTKLKVTIF 305

[Close]
BLAST of Cp4.1LG05g11150 vs. TAIR10
Match: AT3G18990.1 (AT3G18990.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 95.9 bits (237), Expect = 4.1e-20
Identity = 55/152 (36.18%), Postives = 83/152 (54.61%), Query Frame = 1 

Query: 7   PIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNSATLSLPDGANWEVELKKSDGKVS 66
           P P F K+I   T+ E++L +P+KFV   +  L   +  L++PDG  W V L+K+D K+ 
Sbjct: 2   PRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDEL-SVAVALTVPDGHVWRVGLRKADNKIW 61

Query: 67  FARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEVDYPI------------KP 126
           F  GW EFV+ Y+++ GY ++FR EGN  F+V IF+LS +E++Y              + 
Sbjct: 62  FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRA 121

Query: 127 RIFRRLPRNHEDGGRFSPESMRPMHPPRTPKP 147
           R+F  L    ED     P S+ P   P +  P
Sbjct: 122 RLFEDL--EDEDAEVIFPSSVYPSPLPESTVP 150

[Close]
BLAST of Cp4.1LG05g11150 vs. TAIR10
Match: AT1G49475.1 (AT1G49475.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 82.4 bits (202), Expect = 4.7e-16
Identity = 39/105 (37.14%), Postives = 64/105 (60.95%), Query Frame = 1 

Query: 8   IPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNSATLSLPDGANWEVELKKSDGKVSF 67
           +  F KIIL   +IE+ + +P +FV       L ++ TL  P G    + +K+   +V F
Sbjct: 31  VKKFIKIILLSRIIEKMMKVPARFV--RFGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWF 90

Query: 68  ARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEVDYPI 113
            +GW EF E +++  G+F+ F  EG+ CF V+IFD+SA+E++YP+
Sbjct: 91  EKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPL 133

[Close]
BLAST of Cp4.1LG05g11150 vs. TAIR10
Match: AT3G18960.1 (AT3G18960.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 79.7 bits (195), Expect = 3.0e-15
Identity = 37/107 (34.58%), Postives = 64/107 (59.81%), Query Frame = 1 

Query: 6   SPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNSATLSLPDGANWEVELKKSDGKV 65
           SP+  FFK++L  T+ ++ + +P +FV   + S L    TL  P G    ++LK+   ++
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMKIPPRFV-KLQGSKLSEVVTLETPAGFKRSIKLKRIGEEI 84

Query: 66  SFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEVDYPI 113
            F  GW EF E ++++ G+F++F  + N  F V+IF++SA E  YP+
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPL 130

[Close]
BLAST of Cp4.1LG05g11150 vs. TAIR10
Match: AT4G01580.1 (AT4G01580.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 78.6 bits (192), Expect = 6.7e-15
Identity = 37/107 (34.58%), Postives = 64/107 (59.81%), Query Frame = 1 

Query: 6   SPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNSATLSLPDGANWEVELKKSDGKV 65
           SP+  FFK++L  T+ ++ + +P +FV   + S L    TL  P G    ++LK+   ++
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMRIPPRFV-KLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEI 84

Query: 66  SFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEVDYPI 113
            F  GW EF E ++++ G+F++F  + N  F V+IF+ SA E +YP+
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPL 130

[Close]
BLAST of Cp4.1LG05g11150 vs. TAIR10
Match: AT1G49480.1 (AT1G49480.1 related to vernalization1 1)

HSP 1 Score: 75.5 bits (184), Expect = 5.7e-14
Identity = 45/120 (37.50%), Postives = 66/120 (55.00%), Query Frame = 1 

Query: 149 ENQDRVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQE-STDVKLEVA 208
           E ++R +  A +F+    NP F V +RPSY+  G  + LP  FAE+YL   S  +KL++ 
Sbjct: 110 EERERAVNAAKTFE--PTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLG 169

Query: 209 DGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFR 268
           + + W V C     +   R +   GW  F ++N + EGDVCVFEL+ R      +VT FR
Sbjct: 170 EKQ-WPVRC----LYKAGRAKFSQGWYEFTLENNIGEGDVCVFELL-RTRDFVLEVTAFR 221

[Close]
BLAST of Cp4.1LG05g11150 vs. NCBI nr
Match: gi|449460664|ref|XP_004148065.1| (PREDICTED: B3 domain-containing transcription factor VRN1-like isoform X2 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 5.8e-61
Identity = 118/164 (71.95%), Postives = 133/164 (81.10%), Query Frame = 1 

Query: 107 EVDYPIKPRIFRRLPRNHEDGGRFSPESMRPMHPPRTPKPLTENQDRVLRIASSFKLRTK 166
           E DY  +   +R    N  + GR SPESMRPM+P +T + LTENQ  V+R ASSFK RTK
Sbjct: 191 ETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQLVVVRRASSFKCRTK 250

Query: 167 NPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRR 226
           NPSFMVTMRPSYIQTGN LSLPR F+ERY++ES DVKLEV DGRIW VWCGVRWAFTRRR
Sbjct: 251 NPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIWKVWCGVRWAFTRRR 310

Query: 227 TELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRPA 271
           TELK GWKRFAVDN+L+EGD+CVFELMN+ PKV F VTIFR P+
Sbjct: 311 TELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLPS 354

[Close]
BLAST of Cp4.1LG05g11150 vs. NCBI nr
Match: gi|778670075|ref|XP_011649360.1| (PREDICTED: B3 domain-containing transcription factor VRN1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 5.8e-61
Identity = 118/164 (71.95%), Postives = 133/164 (81.10%), Query Frame = 1 

Query: 107 EVDYPIKPRIFRRLPRNHEDGGRFSPESMRPMHPPRTPKPLTENQDRVLRIASSFKLRTK 166
           E DY  +   +R    N  + GR SPESMRPM+P +T + LTENQ  V+R ASSFK RTK
Sbjct: 217 ETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQLVVVRRASSFKCRTK 276

Query: 167 NPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRR 226
           NPSFMVTMRPSYIQTGN LSLPR F+ERY++ES DVKLEV DGRIW VWCGVRWAFTRRR
Sbjct: 277 NPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIWKVWCGVRWAFTRRR 336

Query: 227 TELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRPA 271
           TELK GWKRFAVDN+L+EGD+CVFELMN+ PKV F VTIFR P+
Sbjct: 337 TELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLPS 380

[Close]
BLAST of Cp4.1LG05g11150 vs. NCBI nr
Match: gi|659116007|ref|XP_008457851.1| (PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo])

HSP 1 Score: 241.1 bits (614), Expect = 2.2e-60
Identity = 117/163 (71.78%), Postives = 132/163 (80.98%), Query Frame = 1 

Query: 107 EVDYPIKPRIFRRLPRNHEDGGRFSPESMRPMHPPRTPKPLTENQDRVLRIASSFKLRTK 166
           E +Y  +   +R    N  + GR SPESMRPM+P + P+ LTENQ  VLR ASSFK RTK
Sbjct: 195 ETNYSPRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTK 254

Query: 167 NPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRR 226
           NPSFMVTMRPSYIQTGN LSLPR F+ERY++ES DVKLEV DGRIW VWCGVRWAFTRRR
Sbjct: 255 NPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRIWKVWCGVRWAFTRRR 314

Query: 227 TELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRP 270
           TELK GWKRFAVDN+L+EGD+CVFEL+N+ PKV F VTIFR P
Sbjct: 315 TELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLP 357

[Close]
BLAST of Cp4.1LG05g11150 vs. NCBI nr
Match: gi|700206923|gb|KGN62042.1| (hypothetical protein Csa_2G292230 [Cucumis sativus])

HSP 1 Score: 228.0 bits (580), Expect = 1.9e-56
Identity = 112/163 (68.71%), Postives = 124/163 (76.07%), Query Frame = 1 

Query: 107 EVDYPIKPRIFRRLPRNHEDGGRFSPESMRPMHPPRTPKPLTENQDRVLRIASSFKLRTK 166
           E+D   +    R +  N  D GR SPESMRPM+P +TP  LTENQ  V + AS FK R  
Sbjct: 189 EMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRASWFKSRRN 248

Query: 167 NPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRR 226
           NPSFMVTMRPSYIQTGNYLSLPR F E+Y++ES DVKLEV DGR W VWCGVRWAFTRRR
Sbjct: 249 NPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRCWRVWCGVRWAFTRRR 308

Query: 227 TELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRP 270
           TELK GWKRFAVDN+LKEGD+CVFELM +   V FKV IFR P
Sbjct: 309 TELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLP 351

[Close]
BLAST of Cp4.1LG05g11150 vs. NCBI nr
Match: gi|659116198|ref|XP_008457957.1| (PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo])

HSP 1 Score: 228.0 bits (580), Expect = 1.9e-56
Identity = 110/147 (74.83%), Postives = 118/147 (80.27%), Query Frame = 1 

Query: 123 NHEDGGRFSPESMRPMHPPRTPKPLTENQDRVLRIASSFKLRTKNPSFMVTMRPSYIQTG 182
           N  D GR SPESMRPM+P +TP  LTENQ  V + AS FK R  NPSFMVTMRPSYIQTG
Sbjct: 204 NEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRASRFKSRRNNPSFMVTMRPSYIQTG 263

Query: 183 NYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQL 242
           NYLSLPR F ERY++ES DVKLEV DGR W VWCGVRWAFTRRRTELK GWKRFAVDN+L
Sbjct: 264 NYLSLPRRFGERYIKESVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFAVDNEL 323

Query: 243 KEGDVCVFELMNRIPKVFFKVTIFRRP 270
           KEGD+CVFELM +   V FKV IFR P
Sbjct: 324 KEGDICVFELMEKNDAVLFKVAIFRLP 350

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g11150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
VRN1_ARATH7.2e-1936.18B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 P... [more]
Y4469_ORYSJ3.4e-1627.11Putative B3 domain-containing protein Os04g0346900 OS=Oryza sativa subsp. japoni... [more]
Y3123_ORYSJ3.7e-1527.45B3 domain-containing protein Os03g0212300 OS=Oryza sativa subsp. japonica GN=Os0... [more]
Y1475_ARATH8.3e-1537.14B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana GN=At1g49475 PE=2... [more]
Y3160_ORYSJ1.8e-1425.84Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japoni... [more]
BLAST of Cp4.1LG05g11150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LM04_CUCSA4.1e-6171.95Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287160 PE=4 SV=1[more]
A0A0A0LMR6_CUCSA1.4e-5668.71Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292230 PE=4 SV=1[more]
A0A067LCJ3_JATCU1.8e-4037.29Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01468 PE=4 SV=1[more]
A0A059B061_EUCGR3.0e-4039.93Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01965 PE=4 SV=1[more]
A0A067L932_JATCU9.8e-3934.55Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01471 PE=4 SV=1[more]
BLAST of Cp4.1LG05g11150 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18990.14.1e-2036.18 AP2/B3-like transcriptional factor family protein[more]
AT1G49475.14.7e-1637.14 AP2/B3-like transcriptional factor family protein[more]
AT3G18960.13.0e-1534.58 AP2/B3-like transcriptional factor family protein[more]
AT4G01580.16.7e-1534.58 AP2/B3-like transcriptional factor family protein[more]
AT1G49480.15.7e-1437.50 related to vernalization1 1[more]
BLAST of Cp4.1LG05g11150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449460664|ref|XP_004148065.1|5.8e-6171.95PREDICTED: B3 domain-containing transcription factor VRN1-like isoform X2 [Cucum... [more]
gi|778670075|ref|XP_011649360.1|5.8e-6171.95PREDICTED: B3 domain-containing transcription factor VRN1-like isoform X1 [Cucum... [more]
gi|659116007|ref|XP_008457851.1|2.2e-6071.78PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo][more]
gi|700206923|gb|KGN62042.1|1.9e-5668.71hypothetical protein Csa_2G292230 [Cucumis sativus][more]
gi|659116198|ref|XP_008457957.1|1.9e-5674.83PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR015300DNA-bd_pseudobarrel_sf
IPR003340B3_DNA-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g11150.1Cp4.1LG05g11150.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 170..268
score: 7.7E-19coord: 11..102
score: 8.4
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 170..269
score: 7.2E-13coord: 11..104
score: 1.1
IPR003340B3 DNA binding domainPROFILEPS50863B3coord: 10..104
score: 12.238coord: 170..269
score: 14
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 5..104
score: 1.4E-20coord: 164..268
score: 3.9
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 165..268
score: 2.16E-22coord: 4..104
score: 1.43
NoneNo IPR availablePANTHERPTHR31674FAMILY NOT NAMEDcoord: 6..265
score: 2.6
NoneNo IPR availablePANTHERPTHR31674:SF1SUBFAMILY NOT NAMEDcoord: 6..265
score: 2.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g11150Cucsa.366500Cucumber (Gy14) v1cgycpeB0974
Cp4.1LG05g11150CmaCh20G011380Cucurbita maxima (Rimu)cmacpeB583
Cp4.1LG05g11150CmaCh02G005670Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g11150CmoCh20G011710Cucurbita moschata (Rifu)cmocpeB532
Cp4.1LG05g11150CmoCh02G005760Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g11150Cla020159Watermelon (97103) v1cpewmB749
Cp4.1LG05g11150Csa2G292230Cucumber (Chinese Long) v2cpecuB710
Cp4.1LG05g11150MELO3C020914Melon (DHL92) v3.5.1cpemeB663
Cp4.1LG05g11150MELO3C020923Melon (DHL92) v3.5.1cpemeB660
Cp4.1LG05g11150ClCG02G013090Watermelon (Charleston Gray)cpewcgB666
Cp4.1LG05g11150CSPI02G14630Wild cucumber (PI 183967)cpecpiB712
Cp4.1LG05g11150Lsi10G005970Bottle gourd (USVL1VR-Ls)cpelsiB604
Cp4.1LG05g11150MELO3C020923.2Melon (DHL92) v3.6.1cpemedB791
Cp4.1LG05g11150CsaV3_2G017180Cucumber (Chinese Long) v3cpecucB0890
Cp4.1LG05g11150Bhi10G001806Wax gourdcpewgoB0962
Cp4.1LG05g11150CsGy2G014630Cucumber (Gy14) v2cgybcpeB250
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG05g11150Cp4.1LG16g00420Cucurbita pepo (Zucchini)cpecpeB322
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g11150Cucumber (Gy14) v2cgybcpeB245
Cp4.1LG05g11150Melon (DHL92) v3.6.1cpemedB794
Cp4.1LG05g11150Melon (DHL92) v3.6.1cpemedB809
Cp4.1LG05g11150Silver-seed gourdcarcpeB1476
Cp4.1LG05g11150Cucumber (Chinese Long) v3cpecucB0884
Cp4.1LG05g11150Wax gourdcpewgoB0952
Cp4.1LG05g11150Cucumber (Gy14) v1cgycpeB0666
Cp4.1LG05g11150Cucumber (Gy14) v1cgycpeB0976
Cp4.1LG05g11150Wild cucumber (PI 183967)cpecpiB710
Cp4.1LG05g11150Cucumber (Chinese Long) v2cpecuB708
Cp4.1LG05g11150Bottle gourd (USVL1VR-Ls)cpelsiB595
Cp4.1LG05g11150Watermelon (Charleston Gray)cpewcgB653
Cp4.1LG05g11150Watermelon (97103) v1cpewmB732