Lsi10G005970 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi10G005970
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionB3 domain-containing transcription factor VRN1-like protein
Locationchr10 : 8599808 .. 8604631 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTACATAACTGTTTCTGATGTTTGGAAGGAGAACTTGGCAGATTGGAACCCTAAGTTTAGAAGACCTTTACTGGAAAGAGAACAAGCTTCGTGGCATCAACTGTCGAGCTCCTGGACTGTTCCAAGATCGAATTCAGGAGTAGACATTATCTCTTGGATGCCGATGGTAAACAAACAATTTACTGTCAAATCTCTCAAGAAGATCCTTTCTATGGATTCAAACATGGCTCCTAATATGGAGGTTGGCTGCTTATGGAATTCTTATTTGCCAAAAAAATGCAAAATTTTCATATGGACTATGCTTCATAATGGCCTTAATACCATTGATAAATGACAATCGCGATACCCTGCAATGCATCTCAACCCGAATTGGTGTGTTCTCTGCAAGGCCCACAATGAGTATGGTGATCACTTGTTCTTGCACTGCCCTTATTCAAGGAATCTTTGGAGTCATTTTTGCTGTTCCACGAACCAACACCTTCTCTCATTAGACAGGTTATTGGATTACATGCTTAATATCAAGCTGACTTCAACGAAGAATATCTTGCTTTGTAATCTGATTGGTGTTGTTTTGTGGTGTCTCTGGATCGAGAGGAATGACCGTATGTTCCAACATGGTGGTAAATTGGTTAGTCATCTGTGAGAAGATATCACTTTTCTTGCTGCTCAATGGAGTTCTAAATCTCCTCTCTTTAAAAGCTATAATATTTCTTGTATCACTCTTTGAAGGCTTTCCTCTAGCCTCTCCTTTTGTGCTTTGCTTTGCTTCACAACATTTTTTGTGTTGGTTTGTATGATCCTTTTATCAATGAAGATCTTTTGGTTCTTGGGGCATGATGAGGGTGGTAGGGATGTGTCAACCTAGTTGAGATATCCTGGTGCACCTACTGATCCCACTTGCCTCTTGTATATTGTTAAAAAAAGAAGTTAATCTTAAGAAATATATAATTAAAATTTTCCTCGAATTTAAAAGAAAAAAAAAAAGGAAGAAGAATTTTTGGTCCCTAAACTTTCCAATTTTAATCCCTAAACATTAGTAAGTAACAATTTAGTCTTTATACTTTCAAATTCATAACAAACTAATCTCTGTCGTAAAATATTTTATTGAAATTAAATGTCAATTTTTCTTATTTAATAATGTAAACTTTGTAGCTTTATAACATTTTAGGGTTCATAATTAGTTTATTAATCTACCTATGCAAAAAAATTTCTTAAATCTTAACACAAATTTTCATGATAGCAACCGAATCATTACATATATTAATGTACAATAACTGAATTATTTCATATACACTAAAATTGAAGGACTAGCTTGTTAAATAGTTGCATTACAAAAAAAAGTATATTGAAAAAACCTCCCCAAGCTAAATAAAGTGAGTTAACAAAGAGATAATTAAAAGAGAAATTTTTAAAAATAGAAAAATAAGATAAACTATTTACACAAAATAGTAAAATTTTTAAATAGTTGTGTGATAGACCTGTCTATCATGGTCTTATAAATAGTTTGACATTTTTTCTATTGTGAAAAATTTTCTAATTAAAACTATGGAAATTTTTATTTTTATTATTATGATTATTATTTTGTACATAATCCAGCCCTTGAAAGTTGAACTTTAGTATATTAATGATCCTTCTCACGACCCAAGATGAAATCATTATCATATAGCAACATGCAAACACTATCTTTATACTTTAAAAATAATTTCTTTTGGGGGCTTGGCTTGGGCGTTAAATTGTAGCATATTTCAATTGCTTTTTTTTTTTTTCTTTTAAAGGGAGCATTTCAATAACCACATAAATAGTTACAACCACTCTCATTATGAAGAGAATAAAACTAAAGAAAAAAATTAGAGATAAAAAAACGATACACATCTTCTATAGAAGGTCTCTGATTAGATACAAAAGAATTTGTACAAACTTTACGAACTACGCACTGGACTGCTGAATTTTCAGCCCAAGAACAGTGGCAAAAACTCACACTACCGATTATAGAGCACACTGAGCAAATAGCGTCGGTGTTCAAATGAATTTTGAGGAAAGTGAGACAATAATAATTTAAATCTTCTTGTACAAATTGGTAGTCATTTAGTCTTTTCTTTGAGTATTAACTCAATAGAATAAGACACTTATATTATCATTTCAAATGTCAAGAGTTTCGATTTTTTACTCCCACAATTATATTAAACTAAAAAAGGGTTAAAATGAATTTATATTCCGAAAGGTGTTTTCTCATGGGATAATTTAGTTGTGTTGGTTAGTATTTTTTTTCTTTTTACAATTCTATTTCTAAGAAAAATGATTGGAGAAAGATACCGATAAGATAATTAAGGAAAGATAGAAAAGAGATAACCGTAAGAGAATTAAAGAAAGATATAACTCAATAGATAAGATACTTATACTATATTTCGAGTAATTGATGGTTTTACTCATCGATTATTCTCCCAACAATATAATTTCTTAATTAAAACTCGAACTGACAATTAATTGGACATGGTAGCATTTCATGCTAATCAACTAACCACGTTAAGCGAATTAATAGGAAGCTCAATCAAACACTTTTCTATTCCTAAAGTATGTCATATGCACTATGGACAATCAAGAAAAAAATCCTAGACTAATCATAATCATAACCTAACCACTCAAATTAAACATATATTCGTGAAAAATATAGATCACTAACACGCATGCATGATAGACATAAACAGTCAATATTTTAAGACATTGGTTTGTCACATTAACCCAATACTGATTTCTTATGGATTAAGATAGAAAAGAAATCAATCAATCAACAAATCAATTAATTACGTTAAACCTAAAGCCTCACAAAACCACAAGTTTAGGCCCGACCTAGCACTAAATTGAGATTACGAGCCTAGACGATAGTGAAATCTTGAACCCCGACGCCAAATAGTTGATTACAGAGTAAAATGCAAAAGAAAATCTAAAGAGATGGCTAAAATCAATCAAAACAAACCTAAGCCTCAACCAAAACTCCACATTTGACTTAGGGAGTCAACACAAAATAATGTATTTATAGAAGTTGTGAGAGCATCACGATGCTCTAGAACACAATGTCGCAATGCTTGCAACGTTTTGATAACATTCTTGATTTCTGTCTTTAAGCATCGTAAAACTTTGAGCAGAGTGTTGTAACACTCCTGGTATAGGGGCATTCTTGTCTTTTTTCTATGCTCGATTCCTACAAATAAACCATTCAAGCTCATTAAATTGCTCAAACTAATAAGATTTATCAAGTCTCAAATAGCTCTTTTATGGAGCTATTCGATTGGATTGGGTTGATCTAATTATTTTTTTAAAAAAATTAGGTTAAAAATAACAATTTTTCCATTTCCATCTAGTTTCAATGAACCACATACTTTACTCATGAGTCTTCTTCACATTCTCATTCTCTTCATGATTTTTAGATCAATTCTTCATGACTTTATGTTTTAACTTTCTTTTTTACTTACTTAAACCTCATGAGTCTTTCTTTATTCCCACAGCACAGAAACTAACTCAAAATATCCAAAACAAAAATCCCTCTGCTTAATGGCTCTGTTCAGTTCCCCAAATCCCCATTTCTTCAAGATCATTCTCCACCAAACTCTCACCCAACGAAAGCTCGTAAGTAACAGAAATAACCATATTTTCTAATTTCTTCATTTCTTTATTTAATTAATCTCTTTTCTTCGCAGGAGCTTCCAAACAAATTCGTCAAGAACAATGGTGATTCTCTGTTATACAACAAGGCCACTCTCTGCCTTCCCGATGGCGCAAACTGGAAGCTCCAACTCAAGAAATTGGACAACAAAATCTGTTTCCTCAGAGGTTGGCCGGAATTCGTCCAGTTTTATACTGTTCAACCTGGACATTTACTTGTGTTCCAATTGAAAGCAATTTGCTGCTTCAATGTCCTCATTTTCGATACCACCGCCACCGAAATCGATTATCCAATGTGCCAGCTGCCGGTTCTGATTACGAAAAGTGAAAACGAAGCTGAAGAGGAGTCTGTTCAGATAGTGAATGAGTTGGTTTTGAAGAAGAGAAGAAGAGAGAAAGAGGAAAAATCGGCGGCGTATTGTTCCTTACGAGAGGTGAAGAAGATGATAAGGAAGAATGTGAAGATGAATACGAAGCATCGAGGAATCACTAGCGATGAAGATGAGGATGAAGAAGATCTGGAAACGAATTACTCAGGGAGACAGAGTAATTACAGAGGATCAGGTTTTTCCGCTTTAATTTCTGTAAATTATAAATTAAAATTCAGGAATCAGTACTAAAATTCGATGAATATAATACCTACTTAGCGAATTTCAGTGAGTCCGGAATCGATGAGACCGATGAATCCACGGAAGACGCCGCAGGCATTGACGGCGAATCAATTGGCAGTTAAGAGAAGAGCGAGCTGGTTCAAATGCAGGAGGAACAATCCTTCATTCATGGTGACGATGAGGCCTTCCTACATTCAAACAGGGAATTATCTGGTAAGAACAAAATGCTGAAATGGAATTATGGTGAATTGAAAGAGTGATTTGAGAATAAATGTGATGCAGAGCTTGCCGAGGGGATTTGGAGAGAGATACATAAAGGAATCGGTGGATGTGAAGCTGGAGGTGGGAGACGGGAGGAGTTGGAGAGTGTGGTGCGGCGTCCGGTGGGCGTTCACGCGGCGGCGAACGGAGTTGAAAGGTGGTTGGAAGAGATTCGTTGAGGATAATGAATTGAAGGAAGGCGATATTTGTGTGTTCGAATTGATGAACAAAAACGCCGTTGTTTGCTTCAAAGTCGCCATTTTCCGTCTTCCCAATCCTGAAGAATAA

mRNA sequence

ATGAAAACTAACTCAAAATATCCAAAACAAAAATCCCTCTGCTTAATGGCTCTGTTCAGTTCCCCAAATCCCCATTTCTTCAAGATCATTCTCCACCAAACTCTCACCCAACGAAAGCTCGAGCTTCCAAACAAATTCGTCAAGAACAATGGTGATTCTCTGTTATACAACAAGGCCACTCTCTGCCTTCCCGATGGCGCAAACTGGAAGCTCCAACTCAAGAAATTGGACAACAAAATCTGTTTCCTCAGAGGTTGGCCGGAATTCGTCCAGTTTTATACTGTTCAACCTGGACATTTACTTGTGTTCCAATTGAAAGCAATTTGCTGCTTCAATGTCCTCATTTTCGATACCACCGCCACCGAAATCGATTATCCAATGTGCCAGCTGCCGGTTCTGATTACGAAAAGTGAAAACGAAGCTGAAGAGGAGTCTGTTCAGATAGTGAATGAGTTGGTTTTGAAGAAGAGAAGAAGAGAGAAAGAGGAAAAATCGGCGGCGTATTGTTCCTTACGAGAGGTGAAGAAGATGATAAGGAAGAATGTGAAGATGAATACGAAGCATCGAGGAATCACTAGCGATGAAGATGAGGATGAAGAAGATCTGGAAACGAATTACTCAGGGAGACAGAGTAATTACAGAGGATCAGTGAGTCCGGAATCGATGAGACCGATGAATCCACGGAAGACGCCGCAGGCATTGACGGCGAATCAATTGGCAGTTAAGAGAAGAGCGAGCTGGTTCAAATGCAGGAGGAACAATCCTTCATTCATGGTGACGATGAGGCCTTCCTACATTCAAACAGGGAATTATCTGAGTGATTTGAGAATAAATGTGATGCAGAGCTTGCCGAGGGGATTTGGAGAGAGATACATAAAGGAATCGGTGGATGTGAAGCTGGAGGTGGGAGACGGGAGGAGTTGGAGAGTGTGGTGCGGCGTCCGGTGGGCGTTCACGCGGCGGCGAACGGAGTTGAAAGGTGGTTGGAAGAGATTCGTTGAGGATAATGAATTGAAGGAAGGCGATATTTGTGTGTTCGAATTGATGAACAAAAACGCCGTTGTTTGCTTCAAAGTCGCCATTTTCCGTCTTCCCAATCCTGAAGAATAA

Coding sequence (CDS)

ATGAAAACTAACTCAAAATATCCAAAACAAAAATCCCTCTGCTTAATGGCTCTGTTCAGTTCCCCAAATCCCCATTTCTTCAAGATCATTCTCCACCAAACTCTCACCCAACGAAAGCTCGAGCTTCCAAACAAATTCGTCAAGAACAATGGTGATTCTCTGTTATACAACAAGGCCACTCTCTGCCTTCCCGATGGCGCAAACTGGAAGCTCCAACTCAAGAAATTGGACAACAAAATCTGTTTCCTCAGAGGTTGGCCGGAATTCGTCCAGTTTTATACTGTTCAACCTGGACATTTACTTGTGTTCCAATTGAAAGCAATTTGCTGCTTCAATGTCCTCATTTTCGATACCACCGCCACCGAAATCGATTATCCAATGTGCCAGCTGCCGGTTCTGATTACGAAAAGTGAAAACGAAGCTGAAGAGGAGTCTGTTCAGATAGTGAATGAGTTGGTTTTGAAGAAGAGAAGAAGAGAGAAAGAGGAAAAATCGGCGGCGTATTGTTCCTTACGAGAGGTGAAGAAGATGATAAGGAAGAATGTGAAGATGAATACGAAGCATCGAGGAATCACTAGCGATGAAGATGAGGATGAAGAAGATCTGGAAACGAATTACTCAGGGAGACAGAGTAATTACAGAGGATCAGTGAGTCCGGAATCGATGAGACCGATGAATCCACGGAAGACGCCGCAGGCATTGACGGCGAATCAATTGGCAGTTAAGAGAAGAGCGAGCTGGTTCAAATGCAGGAGGAACAATCCTTCATTCATGGTGACGATGAGGCCTTCCTACATTCAAACAGGGAATTATCTGAGTGATTTGAGAATAAATGTGATGCAGAGCTTGCCGAGGGGATTTGGAGAGAGATACATAAAGGAATCGGTGGATGTGAAGCTGGAGGTGGGAGACGGGAGGAGTTGGAGAGTGTGGTGCGGCGTCCGGTGGGCGTTCACGCGGCGGCGAACGGAGTTGAAAGGTGGTTGGAAGAGATTCGTTGAGGATAATGAATTGAAGGAAGGCGATATTTGTGTGTTCGAATTGATGAACAAAAACGCCGTTGTTTGCTTCAAAGTCGCCATTTTCCGTCTTCCCAATCCTGAAGAATAA

Protein sequence

MKTNSKYPKQKSLCLMALFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMNTKHRGITSDEDEDEEDLETNYSGRQSNYRGSVSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPNPEE
Homology
[Close]
BLAST of Lsi10G005970 vs. Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.6e-16
Identity = 43/104 (41.35%), Postives = 66/104 (63.46%), Query Frame = 1 

Query: 22  PNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKIC 81
           P P F K+I   T+ +++L +P+KFV    D L    A L +PDG  W++ L+K DNKI 
Sbjct: 2   PRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVA-LTVPDGHVWRVGLRKADNKIW 61

Query: 82  FLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTATEIDY 126
           F  GW EFV  Y+++ G+LL+F+ +    F+V IF+ + +EI+Y
Sbjct: 62  FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINY 104

[Close]
BLAST of Lsi10G005970 vs. Swiss-Prot
Match: Y4158_ARATH (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 7.3e-14
Identity = 47/142 (33.10%), Postives = 77/142 (54.23%), Query Frame = 1 

Query: 21  SPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKI 80
           SP   FFK++L  T+  + + +P +FVK  G S L    TL  P G    ++LK++  +I
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMRIPPRFVKLQG-SKLSEVVTLVTPAGYKRSIKLKRIGEEI 84

Query: 81  CFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTATEIDYPMCQLPVLITKSENE 140
            F  GW EF + ++++ GH L+F+ K    F V+IF+ +A E +YP+  + + I   ++ 
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPLDAVHI-IDSDDDV 144

Query: 141 AEEESVQIVNELVLKKRRREKE 163
            E    +   E   KKR R+ E
Sbjct: 145 IEITGKEFDTEHKSKKRPRDIE 164

[Close]
BLAST of Lsi10G005970 vs. Swiss-Prot
Match: Y3896_ARATH (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana GN=At3g18960 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.1e-12
Identity = 53/184 (28.80%), Postives = 93/184 (50.54%), Query Frame = 1 

Query: 21  SPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKI 80
           SP   FFK++L  T+  + +++P +FVK  G S L    TL  P G    ++LK++  +I
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMKIPPRFVKLQG-SKLSEVVTLETPAGFKRSIKLKRIGEEI 84

Query: 81  CFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTATEIDYPMCQLPVLITKSENE 140
            F  GW EF + ++++ GH L+F+ K    F V+IF+ +A E  YP+  + + I   ++ 
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLDAVHI-IDSDDDI 144

Query: 141 AEEESVQIVNELVLKKRRR-----EKEEKSAAYCSLREVKKMIRKNVKMNTKHRGITSDE 200
            +    + V     +K  +     + E KS       E+ K++     MN  H  +  +E
Sbjct: 145 IDITGKEFVGTQGTRKNNQSVNGGDTEHKSKKRSRDIELDKILHDLDVMNPMH--VLKEE 204

[Close]
BLAST of Lsi10G005970 vs. Swiss-Prot
Match: Y1475_ARATH (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 4.4e-11
Identity = 48/177 (27.12%), Postives = 89/177 (50.28%), Query Frame = 1 

Query: 1   MKTNSKYPKQKSLCLMALFSSPNPH-----FFKIILHQTLTQRKLELPNKFVKNNGDSLL 60
           M TN + P   +         P P      F KIIL   + ++ +++P +FV+      L
Sbjct: 4   MHTNRRSPGPITSAATQRRLKPEPEPTVKKFIKIILLSRIIEKMMKVPARFVRFGPK--L 63

Query: 61  YNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLI 120
            +  TL  P G    +++K++ +++ F +GW EF + +++  GH L F  +   CF V+I
Sbjct: 64  TDNVTLQTPVGFKRSIRIKRIGDEVWFEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVI 123

Query: 121 FDTTATEIDYPMCQL-----PVL------ITKSENEAEEESVQIVNELVLKKRRREK 162
           FD +A+EI+YP+         V+       T  E+  ++  V  ++EL+ KK+++ +
Sbjct: 124 FDVSASEIEYPLDDTDDNREEVMDDDEQGFTGFESSDDDGEVVDMDELLKKKKKKPR 178

[Close]
BLAST of Lsi10G005970 vs. Swiss-Prot
Match: REM19_ARATH (B3 domain-containing protein REM19 OS=Arabidopsis thaliana GN=REM19 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 7.1e-09
Identity = 55/203 (27.09%), Postives = 87/203 (42.86%), Query Frame = 1 

Query: 163 EKSAAYCSLREVKKMIRKNVKMNTKHRGITSDEDEDEEDLETNYSGRQSNYRGSVSPESM 222
           ++S A  + + +KK  RK    N +    ++   +D E+    Y    +  R   + E  
Sbjct: 54  KESKAEETPKVLKKRGRKKKNPNPEEVNSSTPGGDDSENRSKFYESASARKRTVTAEERE 113

Query: 223 RPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQS 282
           R +N  KT +                     NP F V +RPSY+  G          +  
Sbjct: 114 RAVNAAKTFEP-------------------TNPYFRVVLRPSYLYRG---------CIMY 173

Query: 283 LPRGFGERYIKE-SVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEG 342
           LP GF E+Y+   S  +KL++G+ + W V C     +   R +   GW  F  +N + EG
Sbjct: 174 LPSGFAEKYLSGISGFIKLQLGE-KQWPVRC----LYKAGRAKFSQGWYEFTLENNIGEG 222

Query: 343 DICVFELMNKNAVVCFKVAIFRL 365
           D+CVFEL+     V  +V  FR+
Sbjct: 234 DVCVFELLRTRDFV-LEVTAFRV 222

[Close]
BLAST of Lsi10G005970 vs. TrEMBL
Match: A0A0A0LMR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292230 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 2.4e-149
Identity = 279/362 (77.07%), Postives = 302/362 (83.43%), Query Frame = 1 

Query: 18  LFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLD 77
           LF SPNPHFFK+ILHQTLTQ+KL+LPNKFVKNNG SLL+NK TL LPDGANWK+QLKKLD
Sbjct: 4   LFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLKKLD 63

Query: 78  NKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTATEIDYPMCQLPVLITKS 137
            KICF RGWPEFVQFY+VQPGH LVFQLK ICCFNVLIFDT+ATEIDYP+ +L  LI KS
Sbjct: 64  GKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLIPKS 123

Query: 138 ENEAEEESVQIVNELVLKKRRREKEEKS-AAYCSLREVKKMIRKNVKMN-TKHRGITSDE 197
            NE EEES+QI+NE+VLKKRR EKEE++  AY SLR +KKM+RKN K+   K+RGITSDE
Sbjct: 124 RNEDEEESIQILNEMVLKKRRMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGITSDE 183

Query: 198 DEDEEDLETNYSGRQSNYR---------GSVSPESMRPMNPRKTPQALTANQLAVKRRAS 257
           DE   DLE + S RQSN+R         G VSPESMRPMNPRKTP ALT NQLAVK+RAS
Sbjct: 184 DEG--DLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRAS 243

Query: 258 WFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVKLEVGDGR 317
           WFK RRNNPSFMVTMRPSYIQTGNYL         SLPR FGE+YIKESVDVKLEVGDGR
Sbjct: 244 WFKSRRNNPSFMVTMRPSYIQTGNYL---------SLPRRFGEKYIKESVDVKLEVGDGR 303

Query: 318 SWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPN 369
            WRVWCGVRWAFTRRRTELKGGWKRF  DNELKEGDICVFELM KN  V FKVAIFRLP+
Sbjct: 304 CWRVWCGVRWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLPD 354

[Close]
BLAST of Lsi10G005970 vs. TrEMBL
Match: A0A0A0LM04_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287160 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 3.8e-134
Identity = 256/368 (69.57%), Postives = 288/368 (78.26%), Query Frame = 1 

Query: 16  MALFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKK 75
           M LF+SPNPHFFKI+LHQ LTQ+KL+LPNKFVKNN  SLL+N ATL LPDG+ W  QL +
Sbjct: 1   MGLFTSPNPHFFKIVLHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTR 60

Query: 76  LDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTATEIDYPMCQLPVLIT 135
           LD KICFLRGWPEFV FY VQPG+ LVFQLK ICCFNVLIFDT+ATEIDYPM +LPV++ 
Sbjct: 61  LDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVP 120

Query: 136 KSENEAEEESVQIVNELVLKKRRR--EKEEKSAAYCSLREVKKMIRKNVKMNTKHRGIT- 195
           KSE++ E ES+QI++E VLKKRRR  +KE++++AY SLRE+KK ++  +    K R  T 
Sbjct: 121 KSESDDEGESIQILHEEVLKKRRRMEKKEKETSAYYSLREMKKNMKIKI---MKRREFTT 180

Query: 196 ----SDEDEDEEDLETNYSGRQSNYR---------GSVSPESMRPMNPRKTPQALTANQL 255
               SD+DED EDLET+YS RQ+NYR         G  SPESMRPMNPRKT Q LT NQL
Sbjct: 181 PQGFSDDDED-EDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQL 240

Query: 256 AVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVK 315
            V RRAS FKCR  NPSFMVTMRPSYIQTGN L         SLPR F ERYIKESVDVK
Sbjct: 241 VVVRRASSFKCRTKNPSFMVTMRPSYIQTGNCL---------SLPRIFSERYIKESVDVK 300

Query: 316 LEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKV 368
           LEVGDGR W+VWCGVRWAFTRRRTELKGGWKRF  DNEL+EGDICVFELMNK   V F V
Sbjct: 301 LEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLV 355

[Close]
BLAST of Lsi10G005970 vs. TrEMBL
Match: A0A067L932_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01471 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.5e-39
Identity = 119/348 (34.20%), Postives = 176/348 (50.57%), Query Frame = 1 

Query: 17  ALFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKL 76
           + F    PHFFKIIL  T+   KL +P KF++  G++L  NK  L +P GA W+++L K 
Sbjct: 12  SFFRPITPHFFKIILDDTIRDGKLIIPRKFLREYGNNLP-NKVVLKVPSGATWQIELMKC 71

Query: 77  DNKICFLRGWPEFVQFYTVQPGHLLVFQLKAIC-CFNVLIFDTTATEIDYPMCQLPVLIT 136
           D +IC  +GW EFV++Y++  GHLLVF+ +  C  F VLIFD +A+EIDYP        T
Sbjct: 72  DGEICLQKGWQEFVEYYSIACGHLLVFEYEKTCHSFYVLIFDKSASEIDYPFS-----FT 131

Query: 137 KSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMNTKHRGITSDE 196
             +NE ++  +            + +EE    +         I K VK+         + 
Sbjct: 132 NGDNELKDPEIG-----------KTEEESPLPFLH-------ISKKVKLE--------NS 191

Query: 197 DEDEEDLETNYSGRQSNYRGSVSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNP 256
           +E  E+ + + S    N + +V P  +         Q+LTA   A   R +  K +  NP
Sbjct: 192 EEQSEEKKCHESKSSENQKENVVPPKI---------QSLTAKGKASALRRAKTKFKSRNP 251

Query: 257 SFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVKLEVGDGRSWRVWCGVR 316
            FMV M+PSY++  +     +I +  +  R + E   K    V LE G+GR W      R
Sbjct: 252 FFMVAMQPSYVRGRS-----KITISATFARKYFE---KMQGKVILEDGNGRVW----SAR 305

Query: 317 WAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFR 364
                ++  +  GW++F EDNEL+ GD+CVFEL+N  A    KV IFR
Sbjct: 312 HVRRGKKASIDNGWRKFSEDNELEVGDVCVFELVNA-AKTKLKVTIFR 305

[Close]
BLAST of Lsi10G005970 vs. TrEMBL
Match: A0A061DG54_THECC (AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao GN=TCM_000516 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.3e-37
Identity = 113/354 (31.92%), Postives = 185/354 (52.26%), Query Frame = 1 

Query: 19  FSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDN 78
           F++ +PHFFKIIL +TL   KL +P KFVK  G+ +  + A L +P+G  WK++L K D 
Sbjct: 14  FTTESPHFFKIILPETLRDGKLGIPTKFVKKYGNGMS-SPALLKVPNGEVWKVELTKSDG 73

Query: 79  KICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTATEIDYPMC--------QL 138
           K+    GW EF+  Y+++ GH LVF+ +  C F+V+IFD +A+EI+YP          +L
Sbjct: 74  KVWLKNGWQEFLNHYSLEYGHFLVFRYEGNCNFHVIIFDRSASEIEYPYTSNNHGQHKEL 133

Query: 139 PVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMNTKHRG 198
           P    K E    + S+QI+ ++   ++ REK     ++ S     KM+R           
Sbjct: 134 PE--EKIEESEGDNSIQILEDIAPSRKTREK-----SHLSCLRPHKMMRS---------- 193

Query: 199 ITSDEDEDEEDLETNYSGRQSNYRGSVSPESMRPMNPRKTPQALTANQLAVKRRASWFKC 258
            T+  ++ E +L++     Q  + GS + +  +  +  +  +    N+    +RA  FK 
Sbjct: 194 -TNSANKTESNLKSESLFPQFRHDGSPARKGDKSTSRHRIQKLKADNKAKALQRARAFKS 253

Query: 259 RRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYI-KESVDVKLEVGDGRSWR 318
              NP F++ M+PSY+    + S  R+    ++P  F  +++ KE   V L   +G++W 
Sbjct: 254 E--NPFFLLVMQPSYV---GFKSTCRL----AIPNNFVRKHLMKEDCVVNLCNSNGKTWT 313

Query: 319 VWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFR 364
           V    R    +    L+ GWK F  DN ++ GD+CVFEL N    + FKV I++
Sbjct: 314 VSFHCREKERKLNASLQSGWKTFANDNNIQVGDVCVFELTN-CIEISFKVCIYQ 338

[Close]
BLAST of Lsi10G005970 vs. TrEMBL
Match: A0A061DGP3_THECC (AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao GN=TCM_000518 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.6e-34
Identity = 124/374 (33.16%), Postives = 183/374 (48.93%), Query Frame = 1 

Query: 8   PKQKSLCLM-----ALFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLC 67
           P  K+ C       ++F+   PHFFKIIL  T+   KL  P KFV   GDSL  +   L 
Sbjct: 4   PSNKASCSQREINPSMFTPKTPHFFKIILEDTIRHSKLRFPRKFVTKYGDSLS-SPVLLM 63

Query: 68  LPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTATE 127
           +P G+ W ++L K D  +    GW EF + Y+++ GH LVF+ +  C F VLIFD +A+E
Sbjct: 64  VPSGSTWHVELIKSDGDVWLQNGWKEFAEHYSLKHGHFLVFKYQGDCNFQVLIFDMSASE 123

Query: 128 IDYP----------MCQLPVLITKSENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLR 187
           I+YP          +CQ P      E +A+++SV+++ E     R R+  + S   C LR
Sbjct: 124 IEYPHISPNMDRDEVCQEP----NKEEDAKDDSVEVLYE---TPRVRKTRQNSQTPC-LR 183

Query: 188 EVKKMIRKNVKMNTKHRGITSDEDEDEEDLETNYSGRQSNYRGSVSPESMRPMNPRKTPQ 247
             +K++R+           T+  D+ + D E   SG    Y  +  P         +   
Sbjct: 184 P-RKILRR-----------TTLSDKYKRDCEDVSSG--EGYLKTKVPRGRHAFGDNENAT 243

Query: 248 ALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYI 307
           AL        +RAS FK    N  F+V M+PSYI  G  L          LP  F  + +
Sbjct: 244 AL--------QRASAFK--SENFFFVVEMQPSYINPGRKL---------CLPSSFITKCL 303

Query: 308 KESV-DVKLEVGDGRSWRV-WCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMN 365
           KE V DV L   DG++W   +C         +  L  GW  F++DN+L+ GD+CVFEL+ 
Sbjct: 304 KEKVGDVTLCTLDGKTWPAKYCCYLTNNKYTKAALHCGWTAFMQDNKLELGDVCVFELIE 334

[Close]
BLAST of Lsi10G005970 vs. TAIR10
Match: AT3G18990.1 (AT3G18990.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 88.6 bits (218), Expect = 8.8e-18
Identity = 43/104 (41.35%), Postives = 66/104 (63.46%), Query Frame = 1 

Query: 22  PNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKIC 81
           P P F K+I   T+ +++L +P+KFV    D L    A L +PDG  W++ L+K DNKI 
Sbjct: 2   PRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVA-LTVPDGHVWRVGLRKADNKIW 61

Query: 82  FLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTATEIDY 126
           F  GW EFV  Y+++ G+LL+F+ +    F+V IF+ + +EI+Y
Sbjct: 62  FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINY 104

[Close]
BLAST of Lsi10G005970 vs. TAIR10
Match: AT4G01580.1 (AT4G01580.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 79.7 bits (195), Expect = 4.1e-15
Identity = 47/142 (33.10%), Postives = 77/142 (54.23%), Query Frame = 1 

Query: 21  SPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKI 80
           SP   FFK++L  T+  + + +P +FVK  G S L    TL  P G    ++LK++  +I
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMRIPPRFVKLQG-SKLSEVVTLVTPAGYKRSIKLKRIGEEI 84

Query: 81  CFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTATEIDYPMCQLPVLITKSENE 140
            F  GW EF + ++++ GH L+F+ K    F V+IF+ +A E +YP+  + + I   ++ 
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPLDAVHI-IDSDDDV 144

Query: 141 AEEESVQIVNELVLKKRRREKE 163
            E    +   E   KKR R+ E
Sbjct: 145 IEITGKEFDTEHKSKKRPRDIE 164

[Close]
BLAST of Lsi10G005970 vs. TAIR10
Match: AT3G18960.1 (AT3G18960.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 74.3 bits (181), Expect = 1.7e-13
Identity = 53/184 (28.80%), Postives = 93/184 (50.54%), Query Frame = 1 

Query: 21  SPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLDNKI 80
           SP   FFK++L  T+  + +++P +FVK  G S L    TL  P G    ++LK++  +I
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMKIPPRFVKLQG-SKLSEVVTLETPAGFKRSIKLKRIGEEI 84

Query: 81  CFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTATEIDYPMCQLPVLITKSENE 140
            F  GW EF + ++++ GH L+F+ K    F V+IF+ +A E  YP+  + + I   ++ 
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLDAVHI-IDSDDDI 144

Query: 141 AEEESVQIVNELVLKKRRR-----EKEEKSAAYCSLREVKKMIRKNVKMNTKHRGITSDE 200
            +    + V     +K  +     + E KS       E+ K++     MN  H  +  +E
Sbjct: 145 IDITGKEFVGTQGTRKNNQSVNGGDTEHKSKKRSRDIELDKILHDLDVMNPMH--VLKEE 204

[Close]
BLAST of Lsi10G005970 vs. TAIR10
Match: AT1G49475.1 (AT1G49475.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 70.5 bits (171), Expect = 2.5e-12
Identity = 48/177 (27.12%), Postives = 89/177 (50.28%), Query Frame = 1 

Query: 1   MKTNSKYPKQKSLCLMALFSSPNPH-----FFKIILHQTLTQRKLELPNKFVKNNGDSLL 60
           M TN + P   +         P P      F KIIL   + ++ +++P +FV+      L
Sbjct: 4   MHTNRRSPGPITSAATQRRLKPEPEPTVKKFIKIILLSRIIEKMMKVPARFVRFGPK--L 63

Query: 61  YNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLI 120
            +  TL  P G    +++K++ +++ F +GW EF + +++  GH L F  +   CF V+I
Sbjct: 64  TDNVTLQTPVGFKRSIRIKRIGDEVWFEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVI 123

Query: 121 FDTTATEIDYPMCQL-----PVL------ITKSENEAEEESVQIVNELVLKKRRREK 162
           FD +A+EI+YP+         V+       T  E+  ++  V  ++EL+ KK+++ +
Sbjct: 124 FDVSASEIEYPLDDTDDNREEVMDDDEQGFTGFESSDDDGEVVDMDELLKKKKKKPR 178

[Close]
BLAST of Lsi10G005970 vs. TAIR10
Match: AT1G49480.1 (AT1G49480.1 related to vernalization1 1)

HSP 1 Score: 63.2 bits (152), Expect = 4.0e-10
Identity = 55/203 (27.09%), Postives = 87/203 (42.86%), Query Frame = 1 

Query: 163 EKSAAYCSLREVKKMIRKNVKMNTKHRGITSDEDEDEEDLETNYSGRQSNYRGSVSPESM 222
           ++S A  + + +KK  RK    N +    ++   +D E+    Y    +  R   + E  
Sbjct: 54  KESKAEETPKVLKKRGRKKKNPNPEEVNSSTPGGDDSENRSKFYESASARKRTVTAEERE 113

Query: 223 RPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQS 282
           R +N  KT +                     NP F V +RPSY+  G          +  
Sbjct: 114 RAVNAAKTFEP-------------------TNPYFRVVLRPSYLYRG---------CIMY 173

Query: 283 LPRGFGERYIKE-SVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEG 342
           LP GF E+Y+   S  +KL++G+ + W V C     +   R +   GW  F  +N + EG
Sbjct: 174 LPSGFAEKYLSGISGFIKLQLGE-KQWPVRC----LYKAGRAKFSQGWYEFTLENNIGEG 222

Query: 343 DICVFELMNKNAVVCFKVAIFRL 365
           D+CVFEL+     V  +V  FR+
Sbjct: 234 DVCVFELLRTRDFV-LEVTAFRV 222

[Close]
BLAST of Lsi10G005970 vs. NCBI nr
Match: gi|700206923|gb|KGN62042.1| (hypothetical protein Csa_2G292230 [Cucumis sativus])

HSP 1 Score: 536.6 bits (1381), Expect = 3.5e-149
Identity = 279/362 (77.07%), Postives = 302/362 (83.43%), Query Frame = 1 

Query: 18  LFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLD 77
           LF SPNPHFFK+ILHQTLTQ+KL+LPNKFVKNNG SLL+NK TL LPDGANWK+QLKKLD
Sbjct: 4   LFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLKKLD 63

Query: 78  NKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTATEIDYPMCQLPVLITKS 137
            KICF RGWPEFVQFY+VQPGH LVFQLK ICCFNVLIFDT+ATEIDYP+ +L  LI KS
Sbjct: 64  GKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLIPKS 123

Query: 138 ENEAEEESVQIVNELVLKKRRREKEEKS-AAYCSLREVKKMIRKNVKMN-TKHRGITSDE 197
            NE EEES+QI+NE+VLKKRR EKEE++  AY SLR +KKM+RKN K+   K+RGITSDE
Sbjct: 124 RNEDEEESIQILNEMVLKKRRMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGITSDE 183

Query: 198 DEDEEDLETNYSGRQSNYR---------GSVSPESMRPMNPRKTPQALTANQLAVKRRAS 257
           DE   DLE + S RQSN+R         G VSPESMRPMNPRKTP ALT NQLAVK+RAS
Sbjct: 184 DEG--DLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRAS 243

Query: 258 WFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVKLEVGDGR 317
           WFK RRNNPSFMVTMRPSYIQTGNYL         SLPR FGE+YIKESVDVKLEVGDGR
Sbjct: 244 WFKSRRNNPSFMVTMRPSYIQTGNYL---------SLPRRFGEKYIKESVDVKLEVGDGR 303

Query: 318 SWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPN 369
            WRVWCGVRWAFTRRRTELKGGWKRF  DNELKEGDICVFELM KN  V FKVAIFRLP+
Sbjct: 304 CWRVWCGVRWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLPD 354

[Close]
BLAST of Lsi10G005970 vs. NCBI nr
Match: gi|659116198|ref|XP_008457957.1| (PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo])

HSP 1 Score: 536.2 bits (1380), Expect = 4.5e-149
Identity = 279/359 (77.72%), Postives = 302/359 (84.12%), Query Frame = 1 

Query: 18  LFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKKLD 77
           LFSSPNPHFFK+ILHQTLTQ+KLELPNKFVKNNG S+L+NK TL LPDGANWK+QLKK D
Sbjct: 4   LFSSPNPHFFKVILHQTLTQQKLELPNKFVKNNGGSMLFNKVTLFLPDGANWKIQLKKSD 63

Query: 78  NKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTATEIDYPMCQLPVLITKS 137
            KI F RGWPEFVQFY+VQPG+ LVFQLK ICCFNVLIFDT+ATEIDYP+  L  +I KS
Sbjct: 64  GKIFFRRGWPEFVQFYSVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPIRGLLDIIPKS 123

Query: 138 ENEAEEESVQIVNELVLKKRRREKEEKSAAYCSLREVKKMIRKNVKMN-TKHRGITSDED 197
            NE EEES+QI+NE+VLKKRR EKEE++ AY SLR +KKM+RKN K+   K+RGITS  D
Sbjct: 124 RNEDEEESIQILNEMVLKKRRMEKEEETPAYRSLRGLKKMMRKNAKVKIAKNRGITS--D 183

Query: 198 EDEEDLETNYSGRQSNYRGS---------VSPESMRPMNPRKTPQALTANQLAVKRRASW 257
           EDEEDLET+ S RQSN+RG+         VSPESMRPMNPRKTP ALT NQLAVK+RAS 
Sbjct: 184 EDEEDLETDNSRRQSNHRGTAYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRASR 243

Query: 258 FKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVKLEVGDGRS 317
           FK RRNNPSFMVTMRPSYIQTGNYL         SLPR FGERYIKESVDVKLEVGDGRS
Sbjct: 244 FKSRRNNPSFMVTMRPSYIQTGNYL---------SLPRRFGERYIKESVDVKLEVGDGRS 303

Query: 318 WRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKVAIFRLPN 367
           WRVWCGVRWAFTRRRTELKGGWKRF  DNELKEGDICVFELM KN  V FKVAIFRLPN
Sbjct: 304 WRVWCGVRWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMEKNDAVLFKVAIFRLPN 351

[Close]
BLAST of Lsi10G005970 vs. NCBI nr
Match: gi|659116007|ref|XP_008457851.1| (PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo])

HSP 1 Score: 497.3 bits (1279), Expect = 2.3e-137
Identity = 260/372 (69.89%), Postives = 289/372 (77.69%), Query Frame = 1 

Query: 16  MALFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKK 75
           M  F SPNPHFFKIILHQ LTQ+KL+LPNKFVKNNGDSLL+N   L LPDGA W  QL K
Sbjct: 1   MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMK 60

Query: 76  LDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTATEIDYPMCQLPVLIT 135
           LD K CFLRGWPEFV+FY++QPG+ LVFQLK ICCFNVLIFDT+ATEIDYPM + PVLI 
Sbjct: 61  LDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRPPVLIP 120

Query: 136 KSENEAEEESVQIVNELVLKKRRR--EKEEKSAAYCSLREVKKMIRKNVKMNTKHRGIT- 195
           KSE+E EEES+ I++E  LKKR+R  +KE++++AYCSLR++KK +   +    KHR  T 
Sbjct: 121 KSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKI---MKHREFTT 180

Query: 196 ----SDEDEDE---EDLETNYSGRQSNYRGSV---------SPESMRPMNPRKTPQALTA 255
               SDEDEDE   EDLETNYS RQ+NYRGS          SPESMRPMNPRK PQ LT 
Sbjct: 181 PQVFSDEDEDEDEDEDLETNYSPRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTE 240

Query: 256 NQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESV 315
           NQL V RRAS FKCR  NPSFMVTMRPSYIQTGN L         SLPR F ERYIKES+
Sbjct: 241 NQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCL---------SLPRIFSERYIKESM 300

Query: 316 DVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVC 369
           DVKLEVGDGR W+VWCGVRWAFTRRRTELKGGWKRF  DNEL+EGDICVFEL+NK   V 
Sbjct: 301 DVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVH 360

[Close]
BLAST of Lsi10G005970 vs. NCBI nr
Match: gi|449460664|ref|XP_004148065.1| (PREDICTED: B3 domain-containing transcription factor VRN1-like isoform X2 [Cucumis sativus])

HSP 1 Score: 486.1 bits (1250), Expect = 5.4e-134
Identity = 256/368 (69.57%), Postives = 288/368 (78.26%), Query Frame = 1 

Query: 16  MALFSSPNPHFFKIILHQTLTQRKLELPNKFVKNNGDSLLYNKATLCLPDGANWKLQLKK 75
           M LF+SPNPHFFKI+LHQ LTQ+KL+LPNKFVKNN  SLL+N ATL LPDG+ W  QL +
Sbjct: 1   MGLFTSPNPHFFKIVLHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTR 60

Query: 76  LDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAICCFNVLIFDTTATEIDYPMCQLPVLIT 135
           LD KICFLRGWPEFV FY VQPG+ LVFQLK ICCFNVLIFDT+ATEIDYPM +LPV++ 
Sbjct: 61  LDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVP 120

Query: 136 KSENEAEEESVQIVNELVLKKRRR--EKEEKSAAYCSLREVKKMIRKNVKMNTKHRGIT- 195
           KSE++ E ES+QI++E VLKKRRR  +KE++++AY SLRE+KK ++  +    K R  T 
Sbjct: 121 KSESDDEGESIQILHEEVLKKRRRMEKKEKETSAYYSLREMKKNMKIKI---MKRREFTT 180

Query: 196 ----SDEDEDEEDLETNYSGRQSNYR---------GSVSPESMRPMNPRKTPQALTANQL 255
               SD+DED EDLET+YS RQ+NYR         G  SPESMRPMNPRKT Q LT NQL
Sbjct: 181 PQGFSDDDED-EDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQL 240

Query: 256 AVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLSDLRINVMQSLPRGFGERYIKESVDVK 315
            V RRAS FKCR  NPSFMVTMRPSYIQTGN L         SLPR F ERYIKESVDVK
Sbjct: 241 VVVRRASSFKCRTKNPSFMVTMRPSYIQTGNCL---------SLPRIFSERYIKESVDVK 300

Query: 316 LEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVVCFKV 368
           LEVGDGR W+VWCGVRWAFTRRRTELKGGWKRF  DNEL+EGDICVFELMNK   V F V
Sbjct: 301 LEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLV 355

[Close]
BLAST of Lsi10G005970 vs. NCBI nr
Match: gi|778670075|ref|XP_011649360.1| (PREDICTED: B3 domain-containing transcription factor VRN1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 471.9 bits (1213), Expect = 1.1e-129
Identity = 256/394 (64.97%), Postives = 288/394 (73.10%), Query Frame = 1 

Query: 16  MALFSSPNPHFFKIILHQTLTQRKL--------------------------ELPNKFVKN 75
           M LF+SPNPHFFKI+LHQ LTQ+KL                          +LPNKFVKN
Sbjct: 1   MGLFTSPNPHFFKIVLHQNLTQQKLVSTNQTNKFFKSHSLITLFFFLLLQQDLPNKFVKN 60

Query: 76  NGDSLLYNKATLCLPDGANWKLQLKKLDNKICFLRGWPEFVQFYTVQPGHLLVFQLKAIC 135
           N  SLL+N ATL LPDG+ W  QL +LD KICFLRGWPEFV FY VQPG+ LVFQLK IC
Sbjct: 61  NAHSLLFNNATLSLPDGSKWNFQLTRLDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGIC 120

Query: 136 CFNVLIFDTTATEIDYPMCQLPVLITKSENEAEEESVQIVNELVLKKRRR--EKEEKSAA 195
           CFNVLIFDT+ATEIDYPM +LPV++ KSE++ E ES+QI++E VLKKRRR  +KE++++A
Sbjct: 121 CFNVLIFDTSATEIDYPMRRLPVIVPKSESDDEGESIQILHEEVLKKRRRMEKKEKETSA 180

Query: 196 YCSLREVKKMIRKNVKMNTKHRGIT-----SDEDEDEEDLETNYSGRQSNYR-------- 255
           Y SLRE+KK ++  +    K R  T     SD+DED EDLET+YS RQ+NYR        
Sbjct: 181 YYSLREMKKNMKIKI---MKRREFTTPQGFSDDDED-EDLETDYSPRQTNYRASEYNERE 240

Query: 256 -GSVSPESMRPMNPRKTPQALTANQLAVKRRASWFKCRRNNPSFMVTMRPSYIQTGNYLS 315
            G  SPESMRPMNPRKT Q LT NQL V RRAS FKCR  NPSFMVTMRPSYIQTGN L 
Sbjct: 241 DGRSSPESMRPMNPRKTQQVLTENQLVVVRRASSFKCRTKNPSFMVTMRPSYIQTGNCL- 300

Query: 316 DLRINVMQSLPRGFGERYIKESVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFV 368
                   SLPR F ERYIKESVDVKLEVGDGR W+VWCGVRWAFTRRRTELKGGWKRF 
Sbjct: 301 --------SLPRIFSERYIKESVDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFA 360

The following BLAST results are available for this feature:
BLAST of Lsi10G005970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
VRN1_ARATH1.6e-1641.35B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 P... [more]
Y4158_ARATH7.3e-1433.10B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2... [more]
Y3896_ARATH3.1e-1228.80B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana GN=At3g18960 PE=2... [more]
Y1475_ARATH4.4e-1127.12B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana GN=At1g49475 PE=2... [more]
REM19_ARATH7.1e-0927.09B3 domain-containing protein REM19 OS=Arabidopsis thaliana GN=REM19 PE=1 SV=1[more]
BLAST of Lsi10G005970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMR6_CUCSA2.4e-14977.07Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292230 PE=4 SV=1[more]
A0A0A0LM04_CUCSA3.8e-13469.57Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287160 PE=4 SV=1[more]
A0A067L932_JATCU3.5e-3934.20Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01471 PE=4 SV=1[more]
A0A061DG54_THECC3.3e-3731.92AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao G... [more]
A0A061DGP3_THECC2.6e-3433.16AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao G... [more]
BLAST of Lsi10G005970 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18990.18.8e-1841.35 AP2/B3-like transcriptional factor family protein[more]
AT4G01580.14.1e-1533.10 AP2/B3-like transcriptional factor family protein[more]
AT3G18960.11.7e-1328.80 AP2/B3-like transcriptional factor family protein[more]
AT1G49475.12.5e-1227.12 AP2/B3-like transcriptional factor family protein[more]
AT1G49480.14.0e-1027.09 related to vernalization1 1[more]
BLAST of Lsi10G005970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206923|gb|KGN62042.1|3.5e-14977.07hypothetical protein Csa_2G292230 [Cucumis sativus][more]
gi|659116198|ref|XP_008457957.1|4.5e-14977.72PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo][more]
gi|659116007|ref|XP_008457851.1|2.3e-13769.89PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo][more]
gi|449460664|ref|XP_004148065.1|5.4e-13469.57PREDICTED: B3 domain-containing transcription factor VRN1-like isoform X2 [Cucum... [more]
gi|778670075|ref|XP_011649360.1|1.1e-12964.97PREDICTED: B3 domain-containing transcription factor VRN1-like isoform X1 [Cucum... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR015300DNA-bd_pseudobarrel_sf
IPR003340B3_DNA-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G005970.1Lsi10G005970.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 280..353
score: 2.4E-16coord: 26..117
score: 1.
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 26..119
score: 8.1E-12coord: 257..359
score: 2.
IPR003340B3 DNA binding domainPROFILEPS50863B3coord: 266..365
score: 12.224coord: 25..119
score: 10
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 252..363
score: 8.4E-22coord: 19..119
score: 2.6
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 19..118
score: 2.35E-18coord: 252..365
score: 1.2
NoneNo IPR availablePANTHERPTHR31674FAMILY NOT NAMEDcoord: 251..361
score: 2.7E-52coord: 21..186
score: 2.7
NoneNo IPR availablePANTHERPTHR31674:SF1SUBFAMILY NOT NAMEDcoord: 251..361
score: 2.7E-52coord: 21..186
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi10G005970Csa2G292230Cucumber (Chinese Long) v2culsiB093
Lsi10G005970CSPI02G14630Wild cucumber (PI 183967)cpilsiB091
Lsi10G005970Cucsa.366520Cucumber (Gy14) v1cgylsiB594
Lsi10G005970CmaCh02G005670Cucurbita maxima (Rimu)cmalsiB546
Lsi10G005970CmoCh20G011710Cucurbita moschata (Rifu)cmolsiB495
Lsi10G005970CmoCh02G005760Cucurbita moschata (Rifu)cmolsiB530
Lsi10G005970Cla020159Watermelon (97103) v1lsiwmB065
Lsi10G005970MELO3C020921Melon (DHL92) v3.5.1lsimeB054
Lsi10G005970ClCG02G013090Watermelon (Charleston Gray)lsiwcgB045
Lsi10G005970MELO3C020923.2Melon (DHL92) v3.6.1lsimedB056
Lsi10G005970Cla97C02G038770Watermelon (97103) v2lsiwmbB044
Lsi10G005970Bhi10G001676Wax gourdlsiwgoB082
Lsi10G005970Bhi10G001806Wax gourdlsiwgoB073
Lsi10G005970Bhi10G001813Wax gourdlsiwgoB078
Lsi10G005970Cp4.1LG16g00420Cucurbita pepo (Zucchini)cpelsiB223
Lsi10G005970Cp4.1LG05g11150Cucurbita pepo (Zucchini)cpelsiB604
Lsi10G005970CsGy2G014630Cucumber (Gy14) v2cgyblsiB086
Lsi10G005970Carg11641Silver-seed gourdcarlsiB963
Lsi10G005970CsaV3_2G017180Cucumber (Chinese Long) v3cuclsiB104
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi10G005970Cucumber (Chinese Long) v3cuclsiB446
Lsi10G005970Watermelon (97103) v2lsiwmbB038
Lsi10G005970Bottle gourd (USVL1VR-Ls)lsilsiB027
Lsi10G005970Cucurbita maxima (Rimu)cmalsiB508
Lsi10G005970Cucumber (Chinese Long) v2culsiB420
Lsi10G005970Cucumber (Gy14) v2cgyblsiB388