Csa2G292240 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G292240
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionB3 domain-containing protein; contains IPR015300 (DNA-binding pseudobarrel domain)
LocationChr2 : 13762197 .. 13763241 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGTTAAACTCTACAAATGTTTTTCTTTCATTTTTATGTTTAGGAAATCCCAAGAAAGTTTGTGAGGGAATATGGCCTAAAAGCTTTGTTAAAGGATCAAATATGTCTAAAAGTGAGGGATGGCAAAGAATGGAACGTTGGGTTGACAAAGAGTAATAATGGAACAAGAGTTTGGTTACATTATGGTTGGGAAAAGCTTGTAGGGTTTTATTCTGTTAAAAGTGGCTACTTTCTTGTGTTCAAATATGAAAACCCATCTCCGAGTTTCTATGTAGTCATCTTTGATCATACTGCCACGGAAATTGAGTATCCCGTAAAGAAAACTCGTCTGGATAAAGCTAAGGAAAAGGTAAAAATGGAGACATATTTTGATGATGATTGTCTTGACCTAGGTATGTTTCTTTGCCTAAGACCACCTTTTTTTTAATTGTTTACCTAAGGTATATATGTTTTTCCATGCATGCTTTGCACTATTTATTTATTACCTAGCTTTTATTTCATAGATTTCAAGGATGGTGATCTTAGCTCTGGGGTGAAGAAACCGACGAACAGCAGGTGGAGGCCGCCGTCGACGGGGAGCCAGCAAGCAAGGGCGATGGCGGAAGCTAACAGATTTCAATCCATGACTTTGAATCCTTCTTTCATCTGCAAGATTTGGCCATCACACATTCATCGCACAAAATCTCTTGTAAGCTGCAAATTTAACTTCATTTTTTCTGCTATGAAAAGCATGGTATATATATATTTTAACCTCTCTTTTTTTCGTTTTATGGAAAGAGTATACCAAAAAATTTTGCTGACATGAATCTAGAAGATTCTATCACAAAAATAATACTCAAAGCATCAGATGGAAGAATGTGGAGTGGTGAATGTGGCTTTTATTGGACTCCTAAAATGCAAAGGATGACTTTCTATAAGTATGGTTGGAAGAGTTTTATTCGAGACAATAACTTAGCAGTTGGAGATTTTTGTGTTTTTGAAATGACTGGAAAAAACAGTACAACAGTCGCTTTCAAAGTTGAAAGTTTTAGGGCTTCTTGA

mRNA sequence

ATGCATGAAATCCCAAGAAAGTTTGTGAGGGAATATGGCCTAAAAGCTTTGTTAAAGGATCAAATATGTCTAAAAGTGAGGGATGGCAAAGAATGGAACGTTGGGTTGACAAAGAGTAATAATGGAACAAGAGTTTGGTTACATTATGGTTGGGAAAAGCTTGTAGGGTTTTATTCTGTTAAAAGTGGCTACTTTCTTGTGTTCAAATATGAAAACCCATCTCCGAGTTTCTATGTAGTCATCTTTGATCATACTGCCACGGAAATTGAGTATCCCGTAAAGAAAACTCGTCTGGATAAAGCTAAGGAAAAGGTAAAAATGGAGACATATTTTGATGATGATTGTCTTGACCTAGATTTCAAGGATGGTGATCTTAGCTCTGGGGTGAAGAAACCGACGAACAGCAGGTGGAGGCCGCCGTCGACGGGGAGCCAGCAAGCAAGGGCGATGGCGGAAGCTAACAGATTTCAATCCATGACTTTGAATCCTTCTTTCATCTGCAAGATTTGGCCATCACACATTCATCGCACAAAATCTCTTAGTATACCAAAAAATTTTGCTGACATGAATCTAGAAGATTCTATCACAAAAATAATACTCAAAGCATCAGATGGAAGAATGTGGAGTGGTGAATGTGGCTTTTATTGGACTCCTAAAATGCAAAGGATGACTTTCTATAAGTATGGTTGGAAGAGTTTTATTCGAGACAATAACTTAGCAGTTGGAGATTTTTGTGTTTTTGAAATGACTGGAAAAAACAGTACAACAGTCGCTTTCAAAGTTGAAAGTTTTAGGGCTTCTTGA

Coding sequence (CDS)

ATGCATGAAATCCCAAGAAAGTTTGTGAGGGAATATGGCCTAAAAGCTTTGTTAAAGGATCAAATATGTCTAAAAGTGAGGGATGGCAAAGAATGGAACGTTGGGTTGACAAAGAGTAATAATGGAACAAGAGTTTGGTTACATTATGGTTGGGAAAAGCTTGTAGGGTTTTATTCTGTTAAAAGTGGCTACTTTCTTGTGTTCAAATATGAAAACCCATCTCCGAGTTTCTATGTAGTCATCTTTGATCATACTGCCACGGAAATTGAGTATCCCGTAAAGAAAACTCGTCTGGATAAAGCTAAGGAAAAGGTAAAAATGGAGACATATTTTGATGATGATTGTCTTGACCTAGATTTCAAGGATGGTGATCTTAGCTCTGGGGTGAAGAAACCGACGAACAGCAGGTGGAGGCCGCCGTCGACGGGGAGCCAGCAAGCAAGGGCGATGGCGGAAGCTAACAGATTTCAATCCATGACTTTGAATCCTTCTTTCATCTGCAAGATTTGGCCATCACACATTCATCGCACAAAATCTCTTAGTATACCAAAAAATTTTGCTGACATGAATCTAGAAGATTCTATCACAAAAATAATACTCAAAGCATCAGATGGAAGAATGTGGAGTGGTGAATGTGGCTTTTATTGGACTCCTAAAATGCAAAGGATGACTTTCTATAAGTATGGTTGGAAGAGTTTTATTCGAGACAATAACTTAGCAGTTGGAGATTTTTGTGTTTTTGAAATGACTGGAAAAAACAGTACAACAGTCGCTTTCAAAGTTGAAAGTTTTAGGGCTTCTTGA

Protein sequence

MHEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDFKDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLAVGDFCVFEMTGKNSTTVAFKVESFRAS*
Homology
[Close]
BLAST of Csa2G292240 vs. Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 7.2e-11
Identity = 41/110 (37.27%), Postives = 59/110 (53.64%), Query Frame = 1 

Query: 4   IPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKSG 63
           +P KFV ++  K  L   + L V DG  W VGL K++N  ++W   GW++ V  YS++ G
Sbjct: 22  VPDKFVSKF--KDELSVAVALTVPDGHVWRVGLRKADN--KIWFQDGWQEFVDRYSIRIG 81

Query: 64  YFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDD 114
           Y L+F+YE  S +F V IF+ + +EI Y      +D A    K    F+D
Sbjct: 82  YLLIFRYEGNS-AFSVYIFNLSHSEINYH-STGLMDSAHNHFKRARLFED 125


HSP 2 Score: 49.7 bits (117), Expect = 5.9e-05
Identity = 38/126 (30.16%), Postives = 56/126 (44.44%), Query Frame = 1 

Query: 142 TGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSIPKNFADMNLEDSITKIILK 201
           T  ++ RA+  A  F+    NP F   + PS+++R   + +P  FA+  L   I+  I  
Sbjct: 223 TAEERERAINAAKTFEPT--NPFFRVVLRPSYLYRGCIMYLPSGFAEKYLS-GISGFIKV 282

Query: 202 ASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLAVGDFCVFEMTGKNSTTVAFKV 261
               + W   C +    K  R  F + GW  F  +NNL  GD CVFE+    +     KV
Sbjct: 283 QLAEKQWPVRCLY----KAGRAKFSQ-GWYEFTLENNLGEGDVCVFELL--RTRDFVLKV 338

Query: 262 ESFRAS 268
            +FR +
Sbjct: 343 TAFRVN 338

[Close]
BLAST of Csa2G292240 vs. Swiss-Prot
Match: Y3160_ORYSJ (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica GN=Os03g0621600 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.9e-10
Identity = 72/260 (27.69%), Postives = 107/260 (41.15%), Query Frame = 1 

Query: 4   IPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKSG 63
           IP +F+  +G K  +   I L+ R G  ++V +TK  N  RV L  GW   V  + +K G
Sbjct: 46  IPNEFLHNFGGK--IPKSIKLETRSGLTFDVQVTK--NSGRVVLQSGWASYVSAHDLKIG 105

Query: 64  YFLVFKYENPSPSFYVVIFDHTATE--IEYPVKKTRLDKAKEKVKMETYFDDDCLDLDFK 123
            FLVFKY   S     +IFD +  E   E PV    +      + M    D+       K
Sbjct: 106 DFLVFKYSGDS-QLKTLIFDSSGCEKVCEKPVD---MSGRSYDIAMRNSQDEK---KKRK 165

Query: 124 DGDLS-SGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTL----------NPSFICKIW 183
             D+S  G  KP+    +          +  +  R Q   L           P +   + 
Sbjct: 166 QRDISRQGTVKPSEEGLKAELVPGCILPSRTDLTRLQKNILIEKVKAINSETPIYGYVMN 225

Query: 184 PSHIHRTK-SLSIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYG 243
            S IH    ++ I K +AD+ L      ++L+   G+ W+  C      K     F K G
Sbjct: 226 NSSIHGIPCTVEISKKYADVYLPFEDGTVVLQ-HHGKSWNVRCCL---TKQNSKRFLK-G 285

Query: 244 WKSFIRDNNLAVGDFCVFEM 250
           W+ F  DN L +GD C+F++
Sbjct: 286 WRQFAGDNKLHLGDICLFDL 289

[Close]
BLAST of Csa2G292240 vs. Swiss-Prot
Match: Y1475_ARATH (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-08
Identity = 43/114 (37.72%), Postives = 61/114 (53.51%), Query Frame = 1 

Query: 1   MHEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSV 60
           M ++P +FVR +G K  L D + L+   G + ++ + +   G  VW   GW +    +S+
Sbjct: 47  MMKVPARFVR-FGPK--LTDNVTLQTPVGFKRSIRIKRI--GDEVWFEKGWSEFAEAHSL 106

Query: 61  KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDD 115
             G+FL F YE  S  F VVIFD +A+EIEYP+  T  D  +E+V      DDD
Sbjct: 107 SDGHFLFFHYEGDS-CFRVVIFDVSASEIEYPLDDT--DDNREEV-----MDDD 147

[Close]
BLAST of Csa2G292240 vs. Swiss-Prot
Match: Y4158_ARATH (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.3e-08
Identity = 39/131 (29.77%), Postives = 64/131 (48.85%), Query Frame = 1 

Query: 1   MHEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSV 60
           M  IP +FV+  G K  L + + L    G + ++ L +   G  +W H GW +    +S+
Sbjct: 43  MMRIPPRFVKLQGSK--LSEVVTLVTPAGYKRSIKLKRI--GEEIWFHEGWSEFAEAHSI 102

Query: 61  KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDF 120
           + G+FL+F+Y+  S SF V+IF+ +A E  YP+    +  +          DDD +++  
Sbjct: 103 EEGHFLLFEYKKNS-SFRVIIFNASACETNYPLDAVHIIDS----------DDDVIEITG 158

Query: 121 KDGDLSSGVKK 132
           K+ D     KK
Sbjct: 163 KEFDTEHKSKK 158

[Close]
BLAST of Csa2G292240 vs. TrEMBL
Match: A0A0A0LJV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292240 PE=4 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 6.7e-157
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1 

Query: 1   MHEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSV 60
           MHEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSV
Sbjct: 1   MHEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSV 60

Query: 61  KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDF 120
           KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDF
Sbjct: 61  KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDF 120

Query: 121 KDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSL 180
           KDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSL
Sbjct: 121 KDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSL 180

Query: 181 SIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLA 240
           SIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLA
Sbjct: 181 SIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLA 240

Query: 241 VGDFCVFEMTGKNSTTVAFKVESFRAS 268
           VGDFCVFEMTGKNSTTVAFKVESFRAS
Sbjct: 241 VGDFCVFEMTGKNSTTVAFKVESFRAS 267

[Close]
BLAST of Csa2G292240 vs. TrEMBL
Match: A0A059AZI7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01962 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.9e-26
Identity = 99/273 (36.26%), Postives = 143/273 (52.38%), Query Frame = 1 

Query: 4   IPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKSG 63
           IP+KFV +YG    L D + L+V  G+ W V L +  +G  VWL  GW   V  Y++K G
Sbjct: 19  IPKKFVIKYGSN--LSDLVFLQVPSGQAWEVELVRRTDG--VWLRRGWPDFVKHYAIKHG 78

Query: 64  YFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEK---VKMETYFDDDCLDLDF 123
           +FLVF+YE  S +F VVIFD +A+EI+YP+  T L K +E      +E + D     L  
Sbjct: 79  HFLVFRYEGGS-AFRVVIFDKSASEIKYPII-TELPKREENEGDTLVEVFEDHFDRPLRI 138

Query: 124 KDG------DLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHI 183
           + G      D+++G+      R RP   G +++ A+  A  FQ    NP F+  + PS I
Sbjct: 139 QSGASNIVCDVNAGLNSSCWKRERP-FRGGEKSEALKRAASFQYP--NPFFLTLMQPSLI 198

Query: 184 HRTKSLSIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFI 243
               SL IP   +  +++       L  S+ R W     F    +  ++     GWK F+
Sbjct: 199 RH--SLHIPSYRSGGDID-------LYVSNERFWLARYKFGIYGRKTQVKI-NGGWKLFV 258

Query: 244 RDNNLAVGDFCVFEMTGKNSTTVAFKVESFRAS 268
           +DNNL VGD CVFE+T K    V+F+V  FRA+
Sbjct: 259 QDNNLKVGDVCVFELTRKVG-QVSFRVVIFRAN 271

[Close]
BLAST of Csa2G292240 vs. TrEMBL
Match: A0A067L932_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01471 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.5e-26
Identity = 89/280 (31.79%), Postives = 134/280 (47.86%), Query Frame = 1 

Query: 4   IPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKSG 63
           IPRKF+REYG    L +++ LKV  G  W + L K +    + L  GW++ V +YS+  G
Sbjct: 37  IPRKFLREYGNN--LPNKVVLKVPSGATWQIELMKCDG--EICLQKGWQEFVEYYSIACG 96

Query: 64  YFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCL------- 123
           + LVF+YE    SFYV+IFD +A+EI+YP   T  D   +  ++    ++  L       
Sbjct: 97  HLLVFEYEKTCHSFYVLIFDKSASEIDYPFSFTNGDNELKDPEIGKTEEESPLPFLHISK 156

Query: 124 DLDFKDGDLSSGVKKPTNSRWR--------PPSTGSQQARAMAEANR---FQSMTLNPSF 183
            +  ++ +  S  KK   S+          PP   S  A+  A A R    +  + NP F
Sbjct: 157 KVKLENSEEQSEEKKCHESKSSENQKENVVPPKIQSLTAKGKASALRRAKTKFKSRNPFF 216

Query: 184 ICKIWPSHIHRTKSLSIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTF 243
           +  + PS++     ++I   FA    E    K+IL+  +GR+WS         +  +   
Sbjct: 217 MVAMQPSYVRGRSKITISATFARKYFEKMQGKVILEDGNGRVWSAR-----HVRRGKKAS 276

Query: 244 YKYGWKSFIRDNNLAVGDFCVFEMTGKNSTTVAFKVESFR 266
              GW+ F  DN L VGD CVFE+   N+     KV  FR
Sbjct: 277 IDNGWRKFSEDNELEVGDVCVFELV--NAAKTKLKVTIFR 305

[Close]
BLAST of Csa2G292240 vs. TrEMBL
Match: A0A059B061_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01965 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.1e-25
Identity = 96/266 (36.09%), Postives = 139/266 (52.26%), Query Frame = 1 

Query: 4   IPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKSG 63
           IP+KFVR+YG  + L D + L +  G  W V L + N+G   +L  GW   V  Y+++ G
Sbjct: 30  IPKKFVRKYG--SSLSDLVFLHLASGDVWEVELLRGNDGA--FLRRGWPDFVKHYAIEHG 89

Query: 64  YFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDFKDG 123
           +FLVF+YE  S +F VVIFD +ATEI+YP+                  DD  ++ D   G
Sbjct: 90  HFLVFRYEGGS-AFRVVIFDKSATEIKYPLVSEN--------------DDPRMEEDV--G 149

Query: 124 DLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSIP 183
           D S  V +  + +       S+++ A+  A  FQS   NP F+  + PS I     LS P
Sbjct: 150 DASVEVFEDHSDQV------SEKSEALERATSFQSP--NPFFLAIMQPSFIRHC--LSAP 209

Query: 184 KNFADMNLEDSITK--IILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLAV 243
             F    + +  +K  IIL  SD R WS    F    + +++ F   GWK F++DNNL +
Sbjct: 210 ARFFMKYIPNFRSKGDIILYVSDERFWSVRYKFGIYGRRRQIKF-NCGWKRFVQDNNLKL 262

Query: 244 GDFCVFEMTGKNSTTVAFKVESFRAS 268
           GD CVFE+  K    ++F+V  FRA+
Sbjct: 270 GDVCVFEIMWK-VHQISFRVLIFRAN 262

[Close]
BLAST of Csa2G292240 vs. TrEMBL
Match: A0A061DGP3_THECC (AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao GN=TCM_000518 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.1e-25
Identity = 92/306 (30.07%), Postives = 139/306 (45.42%), Query Frame = 1 

Query: 5   PRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKSGY 64
           PRKFV +YG    L   + L V  G  W+V L KS+    VWL  GW++    YS+K G+
Sbjct: 44  PRKFVTKYGDS--LSSPVLLMVPSGSTWHVELIKSDGD--VWLQNGWKEFAEHYSLKHGH 103

Query: 65  FLVFKYENPSPSFYVVIFDHTATEIEYP-------------------------------- 124
           FLVFKY+    +F V+IFD +A+EIEYP                                
Sbjct: 104 FLVFKYQGDC-NFQVLIFDMSASEIEYPHISPNMDRDEVCQEPNKEEDAKDDSVEVLYET 163

Query: 125 --VKKTRLD---------KAKEKVKMETYFDDDCLDLDFKDGDLSSGVKKPTNSRWRPPS 184
             V+KTR +         K   +  +   +  DC D+   +G L + V      R R   
Sbjct: 164 PRVRKTRQNSQTPCLRPRKILRRTTLSDKYKRDCEDVSSGEGYLKTKVP-----RGRHAF 223

Query: 185 TGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSIPKNFADMNLEDSITKIILK 244
             ++ A A+  A+ F+S   N  F+ ++ PS+I+  + L +P +F    L++ +  + L 
Sbjct: 224 GDNENATALQRASAFKSE--NFFFVVEMQPSYINPGRKLCLPSSFITKCLKEKVGDVTLC 283

Query: 245 ASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLAVGDFCVFEMTGKNSTTVAFKV 268
             DG+ W  +   Y T           GW +F++DN L +GD CVFE+     T +  KV
Sbjct: 284 TLDGKTWPAKYCCYLTNNKYTKAALHCGWTAFMQDNKLELGDVCVFELI--EQTKILLKV 335

[Close]
BLAST of Csa2G292240 vs. TAIR10
Match: AT3G18990.1 (AT3G18990.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 69.3 bits (168), Expect = 4.0e-12
Identity = 41/110 (37.27%), Postives = 59/110 (53.64%), Query Frame = 1 

Query: 4   IPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKSG 63
           +P KFV ++  K  L   + L V DG  W VGL K++N  ++W   GW++ V  YS++ G
Sbjct: 22  VPDKFVSKF--KDELSVAVALTVPDGHVWRVGLRKADN--KIWFQDGWQEFVDRYSIRIG 81

Query: 64  YFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDD 114
           Y L+F+YE  S +F V IF+ + +EI Y      +D A    K    F+D
Sbjct: 82  YLLIFRYEGNS-AFSVYIFNLSHSEINYH-STGLMDSAHNHFKRARLFED 125


HSP 2 Score: 49.7 bits (117), Expect = 3.3e-06
Identity = 38/126 (30.16%), Postives = 56/126 (44.44%), Query Frame = 1 

Query: 142 TGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSIPKNFADMNLEDSITKIILK 201
           T  ++ RA+  A  F+    NP F   + PS+++R   + +P  FA+  L   I+  I  
Sbjct: 223 TAEERERAINAAKTFEPT--NPFFRVVLRPSYLYRGCIMYLPSGFAEKYLS-GISGFIKV 282

Query: 202 ASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLAVGDFCVFEMTGKNSTTVAFKV 261
               + W   C +    K  R  F + GW  F  +NNL  GD CVFE+    +     KV
Sbjct: 283 QLAEKQWPVRCLY----KAGRAKFSQ-GWYEFTLENNLGEGDVCVFELL--RTRDFVLKV 338

Query: 262 ESFRAS 268
            +FR +
Sbjct: 343 TAFRVN 338

[Close]
BLAST of Csa2G292240 vs. TAIR10
Match: AT1G49475.1 (AT1G49475.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 61.6 bits (148), Expect = 8.4e-10
Identity = 43/114 (37.72%), Postives = 61/114 (53.51%), Query Frame = 1 

Query: 1   MHEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSV 60
           M ++P +FVR +G K  L D + L+   G + ++ + +   G  VW   GW +    +S+
Sbjct: 47  MMKVPARFVR-FGPK--LTDNVTLQTPVGFKRSIRIKRI--GDEVWFEKGWSEFAEAHSL 106

Query: 61  KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDD 115
             G+FL F YE  S  F VVIFD +A+EIEYP+  T  D  +E+V      DDD
Sbjct: 107 SDGHFLFFHYEGDS-CFRVVIFDVSASEIEYPLDDT--DDNREEV-----MDDD 147

[Close]
BLAST of Csa2G292240 vs. TAIR10
Match: AT4G01580.1 (AT4G01580.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-09
Identity = 39/131 (29.77%), Postives = 64/131 (48.85%), Query Frame = 1 

Query: 1   MHEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSV 60
           M  IP +FV+  G K  L + + L    G + ++ L +   G  +W H GW +    +S+
Sbjct: 43  MMRIPPRFVKLQGSK--LSEVVTLVTPAGYKRSIKLKRI--GEEIWFHEGWSEFAEAHSI 102

Query: 61  KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDF 120
           + G+FL+F+Y+  S SF V+IF+ +A E  YP+    +  +          DDD +++  
Sbjct: 103 EEGHFLLFEYKKNS-SFRVIIFNASACETNYPLDAVHIIDS----------DDDVIEITG 158

Query: 121 KDGDLSSGVKK 132
           K+ D     KK
Sbjct: 163 KEFDTEHKSKK 158

[Close]
BLAST of Csa2G292240 vs. NCBI nr
Match: gi|700206924|gb|KGN62043.1| (hypothetical protein Csa_2G292240 [Cucumis sativus])

HSP 1 Score: 561.2 bits (1445), Expect = 9.6e-157
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1 

Query: 1   MHEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSV 60
           MHEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSV
Sbjct: 1   MHEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSV 60

Query: 61  KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDF 120
           KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDF
Sbjct: 61  KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDF 120

Query: 121 KDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSL 180
           KDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSL
Sbjct: 121 KDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSL 180

Query: 181 SIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLA 240
           SIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLA
Sbjct: 181 SIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLA 240

Query: 241 VGDFCVFEMTGKNSTTVAFKVESFRAS 268
           VGDFCVFEMTGKNSTTVAFKVESFRAS
Sbjct: 241 VGDFCVFEMTGKNSTTVAFKVESFRAS 267

[Close]
BLAST of Csa2G292240 vs. NCBI nr
Match: gi|659116200|ref|XP_008457959.1| (PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo])

HSP 1 Score: 488.0 bits (1255), Expect = 1.0e-134
Identity = 234/266 (87.97%), Postives = 248/266 (93.23%), Query Frame = 1 

Query: 3   EIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKS 62
           EIPRKFVREYGL+ALLKDQ+CLKVRDGKEWNVGLTKSNNGTRVW HYGWEKLV FYSVKS
Sbjct: 41  EIPRKFVREYGLQALLKDQVCLKVRDGKEWNVGLTKSNNGTRVWFHYGWEKLVEFYSVKS 100

Query: 63  GYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDFKD 122
           GYFLVFKYEN S S YVVIFD TATEIEYPVKK  LDK+KE+VKMETYFDDD LDLDFKD
Sbjct: 101 GYFLVFKYENQSSSLYVVIFDRTATEIEYPVKKISLDKSKERVKMETYFDDD-LDLDFKD 160

Query: 123 GDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSI 182
           GDLS GVKKPTNSRW+PPSTGSQQARAMA+ANRFQSMTLNPSFICK+WPSHIHRTKSLSI
Sbjct: 161 GDLSFGVKKPTNSRWKPPSTGSQQARAMAKANRFQSMTLNPSFICKVWPSHIHRTKSLSI 220

Query: 183 PKNFADMNLEDSITKIILKASDGRMWSGECGFYWTP-KMQRMTFYKYGWKSFIRDNNLAV 242
           PK+FADM++EDS TKIILKASDGRMWSG CGFYWTP KMQRMT++KYGWKSFIRDN L V
Sbjct: 221 PKSFADMHVEDSTTKIILKASDGRMWSGGCGFYWTPYKMQRMTYFKYGWKSFIRDNYLTV 280

Query: 243 GDFCVFEMTGKNSTTVAFKVESFRAS 268
           GDFCVFEMTGKN TT++FKVE F AS
Sbjct: 281 GDFCVFEMTGKNCTTISFKVEIFTAS 305

[Close]
BLAST of Csa2G292240 vs. NCBI nr
Match: gi|659116202|ref|XP_008457960.1| (PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo])

HSP 1 Score: 276.6 bits (706), Expect = 4.7e-71
Identity = 148/268 (55.22%), Postives = 182/268 (67.91%), Query Frame = 1 

Query: 3   EIPRKFVREYGLKALLKDQICLKVR-DGKEWNVGLTKSNNGTRVWLHY-GWEKLVGFYSV 62
           EIPRKFVREYG+KA   +QICLKV  DG++WNV LTK+N+GTRVW H  GW+  V FYSV
Sbjct: 316 EIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSV 375

Query: 63  KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTR-LDKAKEKVKMETYFDDDCLDLD 122
              YFLVFKYE  S SFYVVIFD TATEIEYP+K    +D A+EKVK ET    + +D  
Sbjct: 376 GLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEKVKKETNISQELMD-- 435

Query: 123 FKDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKS 182
                         N +    +T SQ+ +AMA A  FQSMT+NPSF+CK+ PSHIHR  S
Sbjct: 436 --------------NKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHIHR--S 495

Query: 183 LSIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNL 242
           L++PK F +M++E S+  I L+ SDGR W G C FY   +M++       W+ F +DNNL
Sbjct: 496 LNVPKRFVEMHIEKSMESI-LQVSDGRTWEGSCCFYMNKRMKKRAELASSWRKFKKDNNL 555

Query: 243 AVGDFCVFEMTGKNSTTVAFKVESFRAS 268
            VGDFCVFEM GK+ST ++FKVE FRAS
Sbjct: 556 KVGDFCVFEMIGKSSTRISFKVEIFRAS 564

[Close]
BLAST of Csa2G292240 vs. NCBI nr
Match: gi|659116202|ref|XP_008457960.1| (PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 6.9e-22
Identity = 87/266 (32.71%), Postives = 125/266 (46.99%), Query Frame = 1 

Query: 3   EIPRKFVREYGLKALLKDQICLKVR-DGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVK 62
           E+P+KFVR+YG +AL  +++ LK+   G +W VGL KSN   +VW   GWE+ V F+S+ 
Sbjct: 26  EVPKKFVRKYG-EALKAEEVWLKIMVSGAKWKVGLKKSNE--KVWFEKGWEEFVKFHSID 85

Query: 63  SGYFLVFKYENPSPSFYVVIFDHTATEIEYPVK-KTRLD-----KAKEKVKMET------ 122
            G+FL F+YE  S  F VVIFD TATEIEYP+  K + D     + K K   ET      
Sbjct: 86  YGHFLTFRYEGNS-CFQVVIFDQTATEIEYPISFKNQFDNKKMFEEKRKSVQETLPIKRA 145

Query: 123 ---YFDDDCLDLDFKDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFI 182
                +D+C+         +S         WR              ++  Q + +     
Sbjct: 146 RKEVHEDECVPQTLYKKMKTSDEVGANKVIWR--------------SHELQEVEMK---- 205

Query: 183 CKIWPSHIHRTKSLSIPKNFADMNLEDSITKIILKASDG-RMWSGECGFYW--TPKMQRM 242
                 +    KS  + K FA   L+++   I+  +SD  ++W   C   W      QR 
Sbjct: 206 -----KNTEDLKSSDLKKGFASTYLKETKDLILYVSSDDQKVWKILCVERWLYARSCQRF 263

Query: 243 TFYKYGWKSFIRDNNLAVGDFCVFEM 250
              K GW+ F RDN+L  GD C  E+
Sbjct: 266 EMAK-GWREFARDNSLKEGDICFLEI 263


HSP 2 Score: 203.8 bits (517), Expect = 3.9e-49
Identity = 127/268 (47.39%), Postives = 157/268 (58.58%), Query Frame = 1 

Query: 3   EIPRKFVREYGLKALLKDQICLKVR-DGKEWNVGLTKSNNGTRVWLH-YGWEKLVGFYSV 62
           EIP KFVREYG+KA   +QICLKV  DG++WNVGLTKSN+GTRVW H +GW+  V FYSV
Sbjct: 39  EIPTKFVREYGVKAFATNQICLKVAADGRKWNVGLTKSNDGTRVWFHDHGWQTFVEFYSV 98

Query: 63  KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDF 122
              YFLVFKYE  S SFYVVIFD TATEIEYP+K   LD A+EKVK ET+   D      
Sbjct: 99  GLEYFLVFKYECQSSSFYVVIFDRTATEIEYPIKIICLDDAEEKVKKETHISQDS----- 158

Query: 123 KDGDLSSG-VKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKS 182
           K G+++ G V+   N +   P+T +Q+ RAMA A+ FQ                     S
Sbjct: 159 KTGEVNFGAVELMDNKKKLWPTTTNQRERAMASASAFQ---------------------S 218

Query: 183 LSIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNL 242
           +++  +F            + K S   +  G        K  R      GW+ F +DNNL
Sbjct: 219 MTLNPSF------------MCKMSTSHIHPG--------KSLRAELIS-GWRKFKKDNNL 259

Query: 243 AVGDFCVFEMTGKNSTTVAFKVESFRAS 268
            VGDFCVFEM G +ST ++FKVE FRAS
Sbjct: 279 KVGDFCVFEMIGLSSTRISFKVEIFRAS 259

[Close]
BLAST of Csa2G292240 vs. NCBI nr
Match: gi|823242294|ref|XP_012453831.1| (PREDICTED: B3 domain-containing protein LOC_Os12g40080-like [Gossypium raimondii])

HSP 1 Score: 129.4 bits (324), Expect = 9.3e-27
Identity = 96/296 (32.43%), Postives = 149/296 (50.34%), Query Frame = 1 

Query: 3   EIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKS 62
           EIPRKF R+YG +  L + + +KV +G+ W +  TKS  G ++WL  GW+     YSV+S
Sbjct: 21  EIPRKFARDYGNR--LSNPVFIKVPNGEIWELEFTKS--GGKMWLQDGWQNFAEHYSVES 80

Query: 63  GYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDFKD 122
           G+FLVF+YE     F+V+IFD TATEIEYP      +  K++VK++   +DD  +     
Sbjct: 81  GHFLVFRYEGHC-HFHVIIFDRTATEIEYPDVNDNEETQKQEVKIKQESEDD--EPISIM 140

Query: 123 GDLSSGVK-KPTNSRWRPPST----------------GSQQARAMAE------------- 182
            ++S G++ KP     RP  T                G  +    ++             
Sbjct: 141 NEISHGLRQKPGLQCPRPHKTMKSETMLSGFSAGTGRGEMELTTASKVTSDEKFMVLQRV 200

Query: 183 ANRFQSMTLNPSFICKIWPSHI-HRTKS---LSIPKNFADMNLEDSITKIILKASDGRMW 242
           A+ FQS   NP F+  + P+++ H  K    L IP+ F+ + L+ +   ++L  S+G+ W
Sbjct: 201 ASAFQS--TNPFFLVLMQPTYVSHNPKHSCILGIPREFSRLFLKQN-GNVVLCDSNGKSW 260

Query: 243 SGECGFYWTPKMQRMTFYKYGWKSFIRDNNLAVGDFCVFEMTGKNSTTVAFKVESF 265
           + +         +       GW +F+RD NL VGD C FE+   N   ++FKV  F
Sbjct: 261 AAKYATSLGSNQRPYVRLCNGWGAFVRDKNLQVGDVCAFELI--NCKQISFKVSIF 304

The following BLAST results are available for this feature:
BLAST of Csa2G292240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
VRN1_ARATH7.2e-1137.27B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 P... [more]
Y3160_ORYSJ7.9e-1027.69Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japoni... [more]
Y1475_ARATH1.5e-0837.72B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana GN=At1g49475 PE=2... [more]
Y4158_ARATH3.3e-0829.77B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2... [more]
BLAST of Csa2G292240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJV0_CUCSA6.7e-157100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292240 PE=4 SV=1[more]
A0A059AZI7_EUCGR1.9e-2636.26Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01962 PE=4 SV=1[more]
A0A067L932_JATCU2.5e-2631.79Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01471 PE=4 SV=1[more]
A0A059B061_EUCGR2.1e-2536.09Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01965 PE=4 SV=1[more]
A0A061DGP3_THECC2.1e-2530.07AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao G... [more]
BLAST of Csa2G292240 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18990.14.0e-1237.27 AP2/B3-like transcriptional factor family protein[more]
AT1G49475.18.4e-1037.72 AP2/B3-like transcriptional factor family protein[more]
AT4G01580.11.9e-0929.77 AP2/B3-like transcriptional factor family protein[more]
BLAST of Csa2G292240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206924|gb|KGN62043.1|9.6e-157100.00hypothetical protein Csa_2G292240 [Cucumis sativus][more]
gi|659116200|ref|XP_008457959.1|1.0e-13487.97PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo][more]
gi|659116202|ref|XP_008457960.1|4.7e-7155.22PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo][more]
gi|659116202|ref|XP_008457960.1|6.9e-2232.71PREDICTED: putative B3 domain-containing protein Os03g0621600 [Cucumis melo][more]
gi|823242294|ref|XP_012453831.1|9.3e-2732.43PREDICTED: B3 domain-containing protein LOC_Os12g40080-like [Gossypium raimondii... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003340B3_DNA-bd
IPR015300DNA-bd_pseudobarrel_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G292240.1Csa2G292240.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 169..260
score: 1.6E-16coord: 4..84
score: 8.8
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 1..85
score: 0.0014coord: 166..263
score: 1.
IPR003340B3 DNA binding domainPROFILEPS50863B3coord: 165..263
score: 13.338coord: 1..85
score: 12
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 161..265
score: 1.7E-20coord: 4..93
score: 3.7
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 162..257
score: 1.41E-19coord: 3..92
score: 4.71
NoneNo IPR availablePANTHERPTHR31920FAMILY NOT NAMEDcoord: 4..265
score: 1.6
NoneNo IPR availablePANTHERPTHR31920:SF16SUBFAMILY NOT NAMEDcoord: 4..265
score: 1.6