MELO3C018728 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018728
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionBasic helix-loop-helix DNA-binding superfamily protein
Locationchr1 : 2445335 .. 2446127 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATATCCCAATTTTCAGTTCTCAGCTTCATCCTCCACCGCCGCCAAGATCGAACGCCGAATCATAGAAAAAAACAGAAGAAATCAAATGAAAAACCTCTGTGATCAACTCAAGTCCCTCGTCCCACAACAATATTCAAAGGTCCAGCTTTTTAATTTCTCAATATTCCCACATTCAACGTAGTAGTTAGTCTCTGATTTTATATATACTATGTTAATCGGTTCTCTGTTTTTAATGCAGGAGGTTTCATTGGCATTGCCCGATCAGATTGACGTAGCAATTAAGTACATAAAAGATCTGGAGAAGAAAGTGAATTCAGCTAAAGAAAAGAAAAATCGATTACAAGGGAAAAACAAAAGCGCCATAAACATGGATTCTTCTTCTTCGTCTTCTCCTCAGCTTAAAATAAACCAAATGGGTAAAAGTTTAGAGATAGTTTTAAGCAGTGGAATCGATAATCAGTATCTGTTATGTGAAACCCTTAGGATTCTTCAAGAAGAAGGCATTGAAGTTGTTAATGCAAGCTTCTCTGTTTCTGGGAAATCTGTTTTTCACACCATCCATGCAGAAGTAATCACCTTAACAAACAAACACATGACACATTATATTTATTTATGATGGGTAATGATCGAGTTTTTTGGTGCAGCTTGGTGATTCGATGGTCGAATTTGGGACGACGAAAGCGACGGAGAGATTGAAGAGATTGGTTTACGGATCGAACAGTGATGTTGAATTGCAGAAGGAGAAGCAATGGTGGGAAGAATTTCCATCTGAGAATTGGGATATTTAA

mRNA sequence

ATGGAATATCCCAATTTTCAGTTCTCAGCTTCATCCTCCACCGCCGCCAAGATCGAACGCCGAATCATAGAAAAAAACAGAAGAAATCAAATGAAAAACCTCTGTGATCAACTCAAGTCCCTCGTCCCACAACAATATTCAAAGGAGGTTTCATTGGCATTGCCCGATCAGATTGACGTAGCAATTAAGTACATAAAAGATCTGGAGAAGAAAGTGAATTCAGCTAAAGAAAAGAAAAATCGATTACAAGGGAAAAACAAAAGCGCCATAAACATGGATTCTTCTTCTTCGTCTTCTCCTCAGCTTAAAATAAACCAAATGGGTAAAAGTTTAGAGATAGTTTTAAGCAGTGGAATCGATAATCAGTATCTGTTATGTGAAACCCTTAGGATTCTTCAAGAAGAAGGCATTGAAGTTGTTAATGCAAGCTTCTCTGTTTCTGGGAAATCTGTTTTTCACACCATCCATGCAGAACTTGGTGATTCGATGGTCGAATTTGGGACGACGAAAGCGACGGAGAGATTGAAGAGATTGGTTTACGGATCGAACAGTGATGTTGAATTGCAGAAGGAGAAGCAATGGTGGGAAGAATTTCCATCTGAGAATTGGGATATTTAA

Coding sequence (CDS)

ATGGAATATCCCAATTTTCAGTTCTCAGCTTCATCCTCCACCGCCGCCAAGATCGAACGCCGAATCATAGAAAAAAACAGAAGAAATCAAATGAAAAACCTCTGTGATCAACTCAAGTCCCTCGTCCCACAACAATATTCAAAGGAGGTTTCATTGGCATTGCCCGATCAGATTGACGTAGCAATTAAGTACATAAAAGATCTGGAGAAGAAAGTGAATTCAGCTAAAGAAAAGAAAAATCGATTACAAGGGAAAAACAAAAGCGCCATAAACATGGATTCTTCTTCTTCGTCTTCTCCTCAGCTTAAAATAAACCAAATGGGTAAAAGTTTAGAGATAGTTTTAAGCAGTGGAATCGATAATCAGTATCTGTTATGTGAAACCCTTAGGATTCTTCAAGAAGAAGGCATTGAAGTTGTTAATGCAAGCTTCTCTGTTTCTGGGAAATCTGTTTTTCACACCATCCATGCAGAACTTGGTGATTCGATGGTCGAATTTGGGACGACGAAAGCGACGGAGAGATTGAAGAGATTGGTTTACGGATCGAACAGTGATGTTGAATTGCAGAAGGAGAAGCAATGGTGGGAAGAATTTCCATCTGAGAATTGGGATATTTAA

Protein sequence

MEYPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEKKVNSAKEKKNRLQGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGIDNQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYGSNSDVELQKEKQWWEEFPSENWDI*
Homology
[Close]
BLAST of MELO3C018728 vs. Swiss-Prot
Match: BH036_ARATH (Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.7e-08
Identity = 44/172 (25.58%), Postives = 83/172 (48.26%), Query Frame = 1 

Query: 17  KIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEKKVNSAK 76
           K+  R  E+ RR +M +L   L+SL+P  + K    +  DQ++ A+ YIK L++K+    
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFIKG-KRSTSDQVNEAVNYIKYLQRKIKELS 62

Query: 77  EKKNRLQGKNKSAINMDSSS---------SSSPQLKINQMGKSLEIVLSSG-IDNQYLLC 136
            +++ L   ++ ++   S+          S    + + Q    +EI+LSS     Q    
Sbjct: 63  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQPRFS 122

Query: 137 ETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRL 179
             L++L E G+ ++N+  S+    + +TI AE+ D  +     +  +RL R+
Sbjct: 123 SVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRM 173

[Close]
BLAST of MELO3C018728 vs. Swiss-Prot
Match: BH118_ARATH (Transcription factor bHLH118 OS=Arabidopsis thaliana GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.8e-07
Identity = 46/165 (27.88%), Postives = 80/165 (48.48%), Query Frame = 1 

Query: 17  KIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLE---KKVN 76
           K+  + IEK RR +M +L   L+SL+P ++  +   +  DQ+  A+ YI  L+   K +N
Sbjct: 3   KLVHKEIEKRRRQEMASLYASLRSLLPLEFI-QGKRSTSDQVKGAVNYIDYLQRNIKDIN 62

Query: 77  SAKEKKNRLQGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGIDNQYLLCETLRILQ 136
           S ++    L G++  + N    +  S  + I      +EIVLS     Q      L++L+
Sbjct: 63  SKRDDLVLLSGRSFRSSNEQEWNEISNHVVIRPCLVGIEIVLSI---LQTPFSSVLQVLR 122

Query: 137 EEGIEVVNASFSVSGKSVFHTIHAELGD-SMVEFGTTKATERLKR 178
           E G+ V+    S     + HT+ AE+ D ++++    K T  L +
Sbjct: 123 EHGLYVLGYICSSVNDRLIHTLQAEVNDLALIDLADLKDTLTLMK 163

[Close]
BLAST of MELO3C018728 vs. Swiss-Prot
Match: BH126_ARATH (Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.1e-06
Identity = 38/154 (24.68%), Postives = 69/154 (44.81%), Query Frame = 1 

Query: 17  KIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEKKVNSAK 76
           K+  R IE+ RR +M  L   L++ +P +Y K    A+ D ++ A+ +IKD E ++    
Sbjct: 44  KLLHRDIERQRRQEMATLFATLRTHLPLKYIKG-KRAVSDHVNGAVNFIKDTEARIKELS 103

Query: 77  EKKNRL---------QGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGIDNQYL--L 136
            +++ L            +      D   S    + +      LE+V+SS         L
Sbjct: 104 ARRDELSRETGQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPL 163

Query: 137 CETLRILQEEGIEVVNASFSVSGKSVFHTIHAEL 160
            + L  +QE+G+EV+++  +     + HTI  E+
Sbjct: 164 SKVLETIQEKGLEVMSSFTTRVNDRLMHTIQVEV 196

[Close]
BLAST of MELO3C018728 vs. Swiss-Prot
Match: BH055_ARATH (Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.3e-06
Identity = 46/183 (25.14%), Postives = 86/183 (46.99%), Query Frame = 1 

Query: 17  KIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEKKVNSAK 76
           + + + +E+ RR +  +L   L+ L+P QY K    +  D +  A+ YIKDL+KK+    
Sbjct: 76  RAKHKELERQRRQENTSLFKILRYLLPSQYIKG-KRSSADHVLEAVNYIKDLQKKIKEVS 135

Query: 77  EKKNRLQ-------GKNKSAINMDSSSSSS------PQLKINQMGKSLEIVLSSGIDNQY 136
           EK++R++        + + +I   +SS+ S        + +      LEIV+S    ++ 
Sbjct: 136 EKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSCCNRHES 195

Query: 137 LLCETLRIL-QEEGIEVVNASFSVSGKSVFHTI-----------HAELGDSMVEFGTTKA 175
            L   L++L QE+   +V+   +   +   HTI            +EL + +++ GT++ 
Sbjct: 196 CLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEVEEGIEVYFSELQEKIIKIGTSRV 255

[Close]
BLAST of MELO3C018728 vs. Swiss-Prot
Match: BH120_ARATH (Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 7.0e-06
Identity = 38/153 (24.84%), Postives = 74/153 (48.37%), Query Frame = 1 

Query: 17  KIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEKKVNSAK 76
           K+  R IE+ RR +M  L   L+S +P +Y K    A+ D ++ A+ +IKD + ++    
Sbjct: 28  KLLHRNIERQRRQEMAILFASLRSQLPLKYIKG-KRAMSDHVNGAVSFIKDTQTRIKDLS 87

Query: 77  EKKNRLQGK-------NKSAINMDSSSSSSPQLKINQMGKSLEIV---LSSGIDNQYLLC 136
            +++ L+ +         S     SS S    + +       E+V   L+SG++  + L 
Sbjct: 88  ARRDELKREIGDPTSLTGSGSGSGSSRSEPASVMVQPCVSGFEVVVSSLASGLE-AWPLS 147

Query: 137 ETLRILQEEGIEVVNASFSVSGKSVFHTIHAEL 160
             L +L  +G+EV+++  +   + + +TI  E+
Sbjct: 148 RVLEVLHGQGLEVISSLTARVNERLMYTIQVEV 178

[Close]
BLAST of MELO3C018728 vs. TrEMBL
Match: A0A0A0K2C9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048070 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 1.9e-95
Identity = 187/207 (90.34%), Postives = 194/207 (93.72%), Query Frame = 1 

Query: 4   PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIK 63
           PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQ SKEVSLALPDQIDVAIK
Sbjct: 3   PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVAIK 62

Query: 64  YIKDLEKKVNSAKEKKNRLQGKNKSAINMD-----SSSSSSPQLKINQMGKSLEIVLSSG 123
           YIKDLEK+VNSAKEKKNRLQGKNKSAINMD     SSSSSSPQLKINQMGKSLEI+LSSG
Sbjct: 63  YIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILSSG 122

Query: 124 IDNQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRL 183
            DNQYLLCETLRIL+EEG EVV+ASFSVSG SVFHTIHA+LGDSMVEFG TKATERL RL
Sbjct: 123 NDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLTRL 182

Query: 184 VYGSNSDVELQK-EKQWWEEFPSENWD 205
           VY SNSDVELQK EKQWW+EFPSENW+
Sbjct: 183 VYRSNSDVELQKEEKQWWKEFPSENWE 209

[Close]
BLAST of MELO3C018728 vs. TrEMBL
Match: M5VT39_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018357mg PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.3e-46
Identity = 105/201 (52.24%), Postives = 142/201 (70.65%), Query Frame = 1 

Query: 11  SSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEK 70
           S S++ K+ERR+IEKNRRNQMK L  +L SL+P+Q S+E  L+LPDQID AI YIK LE 
Sbjct: 7   SQSSSTKVERRVIEKNRRNQMKVLYSKLNSLLPRQNSQE-PLSLPDQIDEAINYIKSLET 66

Query: 71  KVNSAKEKKNRLQGKNK----SAINMDSSSSSSP-QLKINQMGKSLEIVLSSGIDN-QYL 130
           K+  +KEK++ L+GK K    +  N DS   S P Q++I++MG +LE+VL SG+DN Q++
Sbjct: 67  KLQKSKEKRDSLKGKKKRSHTACTNFDSMRCSKPPQIEIHEMGSTLEVVLISGLDNHQFM 126

Query: 131 LCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYGSNS 190
             E +RI+ EE  +VV+AS S  G S+FH I AE+G SM++FG  K TE+L+R V GS S
Sbjct: 127 FTEIIRIVHEEQADVVHASLSTLGDSIFHVIRAEVGKSMIDFGAAKITEKLRRFVNGSTS 186

Query: 191 DVELQKEKQW-WEEFPSENWD 205
           D ELQ+E  W +E +P   WD
Sbjct: 187 DEELQREYLWDFEIYPETLWD 206

[Close]
BLAST of MELO3C018728 vs. TrEMBL
Match: W9RA84_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010338 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.1e-45
Identity = 103/192 (53.65%), Postives = 140/192 (72.92%), Query Frame = 1 

Query: 11  SSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEK 70
           S S+A KIERRIIEKNRRNQMK L  +L SL+P Q SKEV   LPDQ+D AI +IK LE 
Sbjct: 22  SQSSATKIERRIIEKNRRNQMKVLYSKLNSLLPPQNSKEVQ-TLPDQVDEAINHIKSLEA 81

Query: 71  KVNSAKEKKNRLQGKNKS---AINMDS-SSSSSPQLKINQMGKSLEIVLSSGIDNQYLLC 130
           ++   KEKK  L G+ +S   A +++S  S  SPQ++I+++G  +E+VL +G+DNQ++  
Sbjct: 82  RLKKYKEKKKSLLGRKRSYTCANSLESVGSQRSPQIEIHEIGSVIEVVLITGLDNQFIFY 141

Query: 131 ETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYGSNSDV 190
           E +RIL EE  +VV+A +SVS  S+FH +HAE+ DS+  FG TK +ERLKR V GS+SD+
Sbjct: 142 ELIRILHEERADVVDAKYSVSRDSIFHVVHAEIADSI--FGATKISERLKRFVSGSSSDI 201

Query: 191 ELQKEKQWWEEF 199
           ELQ + QWW++F
Sbjct: 202 ELQPD-QWWDDF 209

[Close]
BLAST of MELO3C018728 vs. TrEMBL
Match: A0A067JJH0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25773 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.1e-45
Identity = 96/197 (48.73%), Postives = 137/197 (69.54%), Query Frame = 1 

Query: 12  SSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEKK 71
           S+++ K ER++IEKNRRNQMK L   L SL+P++ +KE +L LPDQID AI YIK LE +
Sbjct: 31  SASSTKTERKVIEKNRRNQMKTLFSNLNSLLPKENAKE-ALPLPDQIDEAINYIKSLEAR 90

Query: 72  VNSAKEKKNRLQGKNKSAINMDSSSSSS-----PQLKINQMGKSLEIVLSSGIDNQYLLC 131
           +  ++EKK RL  K +S  +  +S  S+     PQL+I ++G +L+I L SG+DNQ+L C
Sbjct: 91  LKKSQEKKERLSSKKRSFSDYSNSCESTSTLKAPQLQIREVGSALQITLISGLDNQFLFC 150

Query: 132 ETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYGSNSDV 191
           E +RILQEE +E+VNASFSV+  S+FH +HA++ +S   FG  K +ERL RL+ GS S++
Sbjct: 151 EMIRILQEENVEIVNASFSVAASSIFHVVHAQMRESDFMFGGAKVSERLNRLINGSTSEI 210

Query: 192 ELQKEKQWWEEFPSENW 204
           EL+ E   + +   E W
Sbjct: 211 ELEPELWDFNDLNPETW 226

[Close]
BLAST of MELO3C018728 vs. TrEMBL
Match: V4U3N5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016466mg PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.1e-45
Identity = 100/203 (49.26%), Postives = 139/203 (68.47%), Query Frame = 1 

Query: 11  SSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEK 70
           SSS+  KIER+ IEKNRR+QMKNL   LKSL+P Q SKE  L+LPDQ+D AI YIK LE 
Sbjct: 39  SSSSPTKIERKTIEKNRRDQMKNLYSTLKSLLPNQPSKE-ELSLPDQVDEAINYIKMLET 98

Query: 71  KVNSAKEKKNRLQGKNKS---------AINMDSSSSSSPQLKINQMGKSLEIVLSSGIDN 130
           K+   K+KK  LQG+ +S         A  M SSS  +P+++I++MG +LE++L+SG+D+
Sbjct: 99  KLKECKKKKESLQGRERSHACISDGTEARLMTSSSPKAPEIEIHEMGSNLEVILTSGVDD 158

Query: 131 QYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYG 190
           Q++  + +RIL ++G E++NA+FSV G ++FH IHAE+ DSM  FG  K +ERLK  V G
Sbjct: 159 QFIFYDVIRILHQDGAEILNANFSVVGNTIFHVIHAEIRDSMFGFGAAKISERLKGFVSG 218

Query: 191 SNSDVELQKEKQWWEEFPSENWD 205
             S+ E+Q  + W  E   E W+
Sbjct: 219 CASEGEMQLPELWDFEINPELWE 240

[Close]
BLAST of MELO3C018728 vs. TAIR10
Match: AT4G20970.1 (AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 4.3e-22
Identity = 60/184 (32.61%), Postives = 106/184 (57.61%), Query Frame = 1 

Query: 10  ASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLE 69
           +++  +  ++R+ +EKNRR QMK+L  +L SL+P   S E  L LPDQ+D A  YIK L+
Sbjct: 6   SNTGQSRSVDRKTVEKNRRMQMKSLYSELISLLPHHSSTE-PLTLPDQLDEAANYIKKLQ 65

Query: 70  KKVNSAKEKKNRLQG----KNKSAINMDSSSSS--------SPQLKINQMGKSLEIVLSS 129
             V   +E+K  L      +  +++   S SSS         P+++I + G    I L +
Sbjct: 66  VNVEKKRERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVT 125

Query: 130 GIDNQYLLCETLRILQEE-GIEVVNASFSVSGKSVFHTIHAELGDSMVEFGT-TKATERL 180
            ++++++ CE +R+L EE G E+ +A +S+   +VFHT+H ++ +   ++G  ++  ERL
Sbjct: 126 SLEHKFMFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEEH--DYGARSQIPERL 185

[Close]
BLAST of MELO3C018728 vs. TAIR10
Match: AT1G10585.1 (AT1G10585.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 67.8 bits (164), Expect = 9.0e-12
Identity = 52/177 (29.38%), Postives = 90/177 (50.85%), Query Frame = 1 

Query: 7   QFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIK 66
           +    +S++ + +R + EK+RR +MK+L   L S V    S    L +P  ID A  Y+ 
Sbjct: 6   EIGEGNSSSLREQRNLREKDRRMRMKHLFSILSSHV----SPTRKLPVPHLIDQATSYMI 65

Query: 67  DLEKKVNSAKEKKNR-LQGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGID-NQYL 126
            L++ VN  KEKK   LQG+     N+   S   P+L I     ++E+ L   ++  + +
Sbjct: 66  QLKENVNYLKEKKRTLLQGE---LGNLYEGSFLLPKLSIRSRDSTIEMNLIMDLNMKRVM 125

Query: 127 LCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYG 182
           L E + I +EEG +V++A+         +TI A+   S +    ++  ER+++++YG
Sbjct: 126 LHELVSIFEEEGAQVMSANLQNLNDRTTYTIIAQAIISRIGIDPSRIEERVRKIIYG 175

[Close]
BLAST of MELO3C018728 vs. TAIR10
Match: AT5G51780.1 (AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 58.5 bits (140), Expect = 5.5e-09
Identity = 44/172 (25.58%), Postives = 83/172 (48.26%), Query Frame = 1 

Query: 17  KIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEKKVNSAK 76
           K+  R  E+ RR +M +L   L+SL+P  + K    +  DQ++ A+ YIK L++K+    
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFIKG-KRSTSDQVNEAVNYIKYLQRKIKELS 62

Query: 77  EKKNRLQGKNKSAINMDSSS---------SSSPQLKINQMGKSLEIVLSSG-IDNQYLLC 136
            +++ L   ++ ++   S+          S    + + Q    +EI+LSS     Q    
Sbjct: 63  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQPRFS 122

Query: 137 ETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRL 179
             L++L E G+ ++N+  S+    + +TI AE+ D  +     +  +RL R+
Sbjct: 123 SVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRM 173

[Close]
BLAST of MELO3C018728 vs. TAIR10
Match: AT4G25400.1 (AT4G25400.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.7e-08
Identity = 46/165 (27.88%), Postives = 80/165 (48.48%), Query Frame = 1 

Query: 17  KIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLE---KKVN 76
           K+  + IEK RR +M +L   L+SL+P ++  +   +  DQ+  A+ YI  L+   K +N
Sbjct: 3   KLVHKEIEKRRRQEMASLYASLRSLLPLEFI-QGKRSTSDQVKGAVNYIDYLQRNIKDIN 62

Query: 77  SAKEKKNRLQGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGIDNQYLLCETLRILQ 136
           S ++    L G++  + N    +  S  + I      +EIVLS     Q      L++L+
Sbjct: 63  SKRDDLVLLSGRSFRSSNEQEWNEISNHVVIRPCLVGIEIVLSI---LQTPFSSVLQVLR 122

Query: 137 EEGIEVVNASFSVSGKSVFHTIHAELGD-SMVEFGTTKATERLKR 178
           E G+ V+    S     + HT+ AE+ D ++++    K T  L +
Sbjct: 123 EHGLYVLGYICSSVNDRLIHTLQAEVNDLALIDLADLKDTLTLMK 163

[Close]
BLAST of MELO3C018728 vs. TAIR10
Match: AT4G25410.1 (AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-07
Identity = 38/154 (24.68%), Postives = 69/154 (44.81%), Query Frame = 1 

Query: 17  KIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEKKVNSAK 76
           K+  R IE+ RR +M  L   L++ +P +Y K    A+ D ++ A+ +IKD E ++    
Sbjct: 44  KLLHRDIERQRRQEMATLFATLRTHLPLKYIKG-KRAVSDHVNGAVNFIKDTEARIKELS 103

Query: 77  EKKNRL---------QGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGIDNQYL--L 136
            +++ L            +      D   S    + +      LE+V+SS         L
Sbjct: 104 ARRDELSRETGQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPL 163

Query: 137 CETLRILQEEGIEVVNASFSVSGKSVFHTIHAEL 160
            + L  +QE+G+EV+++  +     + HTI  E+
Sbjct: 164 SKVLETIQEKGLEVMSSFTTRVNDRLMHTIQVEV 196

[Close]
BLAST of MELO3C018728 vs. NCBI nr
Match: gi|659110598|ref|XP_008455310.1| (PREDICTED: transcription factor bHLH101-like [Cucumis melo])

HSP 1 Score: 402.5 bits (1033), Expect = 4.4e-109
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 1 

Query: 1   MEYPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDV 60
           MEYPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDV
Sbjct: 1   MEYPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDV 60

Query: 61  AIKYIKDLEKKVNSAKEKKNRLQGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGID 120
           AIKYIKDLEKKVNSAKEKKNRLQGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGID
Sbjct: 61  AIKYIKDLEKKVNSAKEKKNRLQGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGID 120

Query: 121 NQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVY 180
           NQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVY
Sbjct: 121 NQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVY 180

Query: 181 GSNSDVELQKEKQWWEEFPSENWDI 206
           GSNSDVELQKEKQWWEEFPSENWDI
Sbjct: 181 GSNSDVELQKEKQWWEEFPSENWDI 205

[Close]
BLAST of MELO3C018728 vs. NCBI nr
Match: gi|778730135|ref|XP_011659708.1| (PREDICTED: transcription factor bHLH125-like [Cucumis sativus])

HSP 1 Score: 356.7 bits (914), Expect = 2.8e-95
Identity = 187/207 (90.34%), Postives = 194/207 (93.72%), Query Frame = 1 

Query: 4   PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIK 63
           PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQ SKEVSLALPDQIDVAIK
Sbjct: 3   PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVAIK 62

Query: 64  YIKDLEKKVNSAKEKKNRLQGKNKSAINMD-----SSSSSSPQLKINQMGKSLEIVLSSG 123
           YIKDLEK+VNSAKEKKNRLQGKNKSAINMD     SSSSSSPQLKINQMGKSLEI+LSSG
Sbjct: 63  YIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILSSG 122

Query: 124 IDNQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRL 183
            DNQYLLCETLRIL+EEG EVV+ASFSVSG SVFHTIHA+LGDSMVEFG TKATERL RL
Sbjct: 123 NDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLTRL 182

Query: 184 VYGSNSDVELQK-EKQWWEEFPSENWD 205
           VY SNSDVELQK EKQWW+EFPSENW+
Sbjct: 183 VYRSNSDVELQKEEKQWWKEFPSENWE 209

[Close]
BLAST of MELO3C018728 vs. NCBI nr
Match: gi|595790223|ref|XP_007198864.1| (hypothetical protein PRUPE_ppa018357mg [Prunus persica])

HSP 1 Score: 192.2 bits (487), Expect = 9.0e-46
Identity = 105/201 (52.24%), Postives = 142/201 (70.65%), Query Frame = 1 

Query: 11  SSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEK 70
           S S++ K+ERR+IEKNRRNQMK L  +L SL+P+Q S+E  L+LPDQID AI YIK LE 
Sbjct: 7   SQSSSTKVERRVIEKNRRNQMKVLYSKLNSLLPRQNSQE-PLSLPDQIDEAINYIKSLET 66

Query: 71  KVNSAKEKKNRLQGKNK----SAINMDSSSSSSP-QLKINQMGKSLEIVLSSGIDN-QYL 130
           K+  +KEK++ L+GK K    +  N DS   S P Q++I++MG +LE+VL SG+DN Q++
Sbjct: 67  KLQKSKEKRDSLKGKKKRSHTACTNFDSMRCSKPPQIEIHEMGSTLEVVLISGLDNHQFM 126

Query: 131 LCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYGSNS 190
             E +RI+ EE  +VV+AS S  G S+FH I AE+G SM++FG  K TE+L+R V GS S
Sbjct: 127 FTEIIRIVHEEQADVVHASLSTLGDSIFHVIRAEVGKSMIDFGAAKITEKLRRFVNGSTS 186

Query: 191 DVELQKEKQW-WEEFPSENWD 205
           D ELQ+E  W +E +P   WD
Sbjct: 187 DEELQREYLWDFEIYPETLWD 206

[Close]
BLAST of MELO3C018728 vs. NCBI nr
Match: gi|645245688|ref|XP_008228998.1| (PREDICTED: transcription factor bHLH36-like [Prunus mume])

HSP 1 Score: 190.7 bits (483), Expect = 2.6e-45
Identity = 105/201 (52.24%), Postives = 142/201 (70.65%), Query Frame = 1 

Query: 11  SSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEK 70
           S S++ K+ERR+IEKNRRNQMK L  +L SL+P+Q S+E   +LPDQID AI YIK LE 
Sbjct: 23  SQSSSTKVERRVIEKNRRNQMKVLYSKLNSLLPRQNSQEPP-SLPDQIDEAINYIKSLES 82

Query: 71  KVNSAKEKKNRLQGKNK----SAINMDSSSSSSP-QLKINQMGKSLEIVLSSGIDN-QYL 130
           K+  +KEK++ L+G  K    +  N DS  SS P Q++I+++G +LE+VL SG+DN Q++
Sbjct: 83  KLQKSKEKRDSLKGNRKRSHTACTNFDSMRSSKPPQIEIHEIGSTLEVVLISGLDNHQFM 142

Query: 131 LCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYGSNS 190
           L E +RIL EE  +VV+AS S  G S+FH I AE+G SM++FG  K TE+L+R V GS S
Sbjct: 143 LTEIIRILHEEQADVVHASLSTLGDSIFHVIRAEMGKSMLDFGAAKITEKLRRFVDGSTS 202

Query: 191 DVELQKEKQW-WEEFPSENWD 205
           D ELQ+E  W +E +P   WD
Sbjct: 203 DEELQREYLWDFEIYPETIWD 222

[Close]
BLAST of MELO3C018728 vs. NCBI nr
Match: gi|703080720|ref|XP_010091496.1| (hypothetical protein L484_010338 [Morus notabilis])

HSP 1 Score: 189.9 bits (481), Expect = 4.5e-45
Identity = 103/192 (53.65%), Postives = 140/192 (72.92%), Query Frame = 1 

Query: 11  SSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEK 70
           S S+A KIERRIIEKNRRNQMK L  +L SL+P Q SKEV   LPDQ+D AI +IK LE 
Sbjct: 22  SQSSATKIERRIIEKNRRNQMKVLYSKLNSLLPPQNSKEVQ-TLPDQVDEAINHIKSLEA 81

Query: 71  KVNSAKEKKNRLQGKNKS---AINMDS-SSSSSPQLKINQMGKSLEIVLSSGIDNQYLLC 130
           ++   KEKK  L G+ +S   A +++S  S  SPQ++I+++G  +E+VL +G+DNQ++  
Sbjct: 82  RLKKYKEKKKSLLGRKRSYTCANSLESVGSQRSPQIEIHEIGSVIEVVLITGLDNQFIFY 141

Query: 131 ETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYGSNSDV 190
           E +RIL EE  +VV+A +SVS  S+FH +HAE+ DS+  FG TK +ERLKR V GS+SD+
Sbjct: 142 ELIRILHEERADVVDAKYSVSRDSIFHVVHAEIADSI--FGATKISERLKRFVSGSSSDI 201

Query: 191 ELQKEKQWWEEF 199
           ELQ + QWW++F
Sbjct: 202 ELQPD-QWWDDF 209

The following BLAST results are available for this feature:
BLAST of MELO3C018728 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH036_ARATH9.7e-0825.58Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1[more]
BH118_ARATH4.8e-0727.88Transcription factor bHLH118 OS=Arabidopsis thaliana GN=BHLH118 PE=2 SV=1[more]
BH126_ARATH4.1e-0624.68Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1[more]
BH055_ARATH5.3e-0625.14Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1[more]
BH120_ARATH7.0e-0624.84Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2[more]
BLAST of MELO3C018728 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2C9_CUCSA1.9e-9590.34Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048070 PE=4 SV=1[more]
M5VT39_PRUPE6.3e-4652.24Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018357mg PE=4 SV=1[more]
W9RA84_9ROSA3.1e-4553.65Uncharacterized protein OS=Morus notabilis GN=L484_010338 PE=4 SV=1[more]
A0A067JJH0_JATCU4.1e-4548.73Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25773 PE=4 SV=1[more]
V4U3N5_9ROSI4.1e-4549.26Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016466mg PE=4 SV=1[more]
BLAST of MELO3C018728 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G20970.14.3e-2232.61 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G10585.19.0e-1229.38 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G51780.15.5e-0925.58 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G25400.12.7e-0827.88 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G25410.12.3e-0724.68 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of MELO3C018728 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110598|ref|XP_008455310.1|4.4e-109100.00PREDICTED: transcription factor bHLH101-like [Cucumis melo][more]
gi|778730135|ref|XP_011659708.1|2.8e-9590.34PREDICTED: transcription factor bHLH125-like [Cucumis sativus][more]
gi|595790223|ref|XP_007198864.1|9.0e-4652.24hypothetical protein PRUPE_ppa018357mg [Prunus persica][more]
gi|645245688|ref|XP_008228998.1|2.6e-4552.24PREDICTED: transcription factor bHLH36-like [Prunus mume][more]
gi|703080720|ref|XP_010091496.1|4.5e-4553.65hypothetical protein L484_010338 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR015660MASH1/Ascl1a-like
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
cellular_component GO:0005575 cellular_component
cellular_component GO:0090575 RNA polymerase II transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018728T1MELO3C018728T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 20..88
score: 1.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 21..69
score: 4.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 15..68
score: 11
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 17..87
score: 7.33
IPR015660Achaete-scute transcription factor-relatedPANTHERPTHR13935ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATEDcoord: 9..191
score: 4.4
NoneNo IPR availableunknownCoilCoilcoord: 58..92
scor
NoneNo IPR availablePANTHERPTHR13935:SF53BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEINcoord: 9..191
score: 4.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C018728Csa7G048070Cucumber (Chinese Long) v2cumeB530
MELO3C018728Cla013555Watermelon (97103) v1mewmB248
MELO3C018728Cla002264Watermelon (97103) v1mewmB226
MELO3C018728ClCG02G017710Watermelon (Charleston Gray)mewcgB202
MELO3C018728ClCG07G002820Watermelon (Charleston Gray)mewcgB218
MELO3C018728Cla97C07G131160Watermelon (97103) v2mewmbB201
MELO3C018728Cla97C02G043460Watermelon (97103) v2mewmbB185
MELO3C018728Bhi05G001627Wax gourdmewgoB221
MELO3C018728Bhi10G000853Wax gourdmewgoB232
MELO3C018728CSPI07G04710Wild cucumber (PI 183967)cpimeB538
MELO3C018728Cucsa.119170Cucumber (Gy14) v1cgymeB184
MELO3C018728Cucsa.126730Cucumber (Gy14) v1cgymeB199
MELO3C018728Cucsa.147580Cucumber (Gy14) v1cgymeB248
MELO3C018728CmaCh20G002040Cucurbita maxima (Rimu)cmameB517
MELO3C018728CmaCh11G018830Cucurbita maxima (Rimu)cmameB099
MELO3C018728CmoCh02G000960Cucurbita moschata (Rifu)cmomeB553
MELO3C018728CmoCh18G003510Cucurbita moschata (Rifu)cmomeB360
MELO3C018728CmoCh11G019630Cucurbita moschata (Rifu)cmomeB090
MELO3C018728Lsi10G009020Bottle gourd (USVL1VR-Ls)lsimeB066
MELO3C018728Lsi11G015660Bottle gourd (USVL1VR-Ls)lsimeB095
MELO3C018728Cp4.1LG05g14860Cucurbita pepo (Zucchini)cpemeB683
MELO3C018728Cp4.1LG04g03170Cucurbita pepo (Zucchini)cpemeB609
MELO3C018728CsGy7G004270Cucumber (Gy14) v2cgybmeB468
MELO3C018728CsGy6G010460Cucumber (Gy14) v2cgybmeB401
MELO3C018728Carg14625Silver-seed gourdcarmeB0151
MELO3C018728Carg19128Silver-seed gourdcarmeB0715
MELO3C018728CsaV3_6G012850Cucumber (Chinese Long) v3cucmeB468
MELO3C018728CsaV3_7G004510Cucumber (Chinese Long) v3cucmeB548
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
MELO3C018728MELO3C013627Melon (DHL92) v3.5.1memeB043
The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018728Cucurbita pepo (Zucchini)cpemeB481
MELO3C018728Silver-seed gourdcarmeB0033
MELO3C018728Silver-seed gourdcarmeB0865
MELO3C018728Cucurbita maxima (Rimu)cmameB461
MELO3C018728Cucurbita maxima (Rimu)cmameB562
MELO3C018728Cucurbita moschata (Rifu)cmomeB190
MELO3C018728Cucurbita moschata (Rifu)cmomeB452