MELO3C018728T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C018728T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionBasic helix-loop-helix DNA-binding superfamily protein
Locationchr1 : 2445335 .. 2446127 (-)
Sequence length618
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATATCCCAATTTTCAGTTCTCAGCTTCATCCTCCACCGCCGCCAAGATCGAACGCCGAATCATAGAAAAAAACAGAAGAAATCAAATGAAAAACCTCTGTGATCAACTCAAGTCCCTCGTCCCACAACAATATTCAAAGGTCCAGCTTTTTAATTTCTCAATATTCCCACATTCAACGTAGTAGTTAGTCTCTGATTTTATATATACTATGTTAATCGGTTCTCTGTTTTTAATGCAGGAGGTTTCATTGGCATTGCCCGATCAGATTGACGTAGCAATTAAGTACATAAAAGATCTGGAGAAGAAAGTGAATTCAGCTAAAGAAAAGAAAAATCGATTACAAGGGAAAAACAAAAGCGCCATAAACATGGATTCTTCTTCTTCGTCTTCTCCTCAGCTTAAAATAAACCAAATGGGTAAAAGTTTAGAGATAGTTTTAAGCAGTGGAATCGATAATCAGTATCTGTTATGTGAAACCCTTAGGATTCTTCAAGAAGAAGGCATTGAAGTTGTTAATGCAAGCTTCTCTGTTTCTGGGAAATCTGTTTTTCACACCATCCATGCAGAAGTAATCACCTTAACAAACAAACACATGACACATTATATTTATTTATGATGGGTAATGATCGAGTTTTTTGGTGCAGCTTGGTGATTCGATGGTCGAATTTGGGACGACGAAAGCGACGGAGAGATTGAAGAGATTGGTTTACGGATCGAACAGTGATGTTGAATTGCAGAAGGAGAAGCAATGGTGGGAAGAATTTCCATCTGAGAATTGGGATATTTAA

mRNA sequence

ATGGAATATCCCAATTTTCAGTTCTCAGCTTCATCCTCCACCGCCGCCAAGATCGAACGCCGAATCATAGAAAAAAACAGAAGAAATCAAATGAAAAACCTCTGTGATCAACTCAAGTCCCTCGTCCCACAACAATATTCAAAGGAGGTTTCATTGGCATTGCCCGATCAGATTGACGTAGCAATTAAGTACATAAAAGATCTGGAGAAGAAAGTGAATTCAGCTAAAGAAAAGAAAAATCGATTACAAGGGAAAAACAAAAGCGCCATAAACATGGATTCTTCTTCTTCGTCTTCTCCTCAGCTTAAAATAAACCAAATGGGTAAAAGTTTAGAGATAGTTTTAAGCAGTGGAATCGATAATCAGTATCTGTTATGTGAAACCCTTAGGATTCTTCAAGAAGAAGGCATTGAAGTTGTTAATGCAAGCTTCTCTGTTTCTGGGAAATCTGTTTTTCACACCATCCATGCAGAACTTGGTGATTCGATGGTCGAATTTGGGACGACGAAAGCGACGGAGAGATTGAAGAGATTGGTTTACGGATCGAACAGTGATGTTGAATTGCAGAAGGAGAAGCAATGGTGGGAAGAATTTCCATCTGAGAATTGGGATATTTAA

Coding sequence (CDS)

ATGGAATATCCCAATTTTCAGTTCTCAGCTTCATCCTCCACCGCCGCCAAGATCGAACGCCGAATCATAGAAAAAAACAGAAGAAATCAAATGAAAAACCTCTGTGATCAACTCAAGTCCCTCGTCCCACAACAATATTCAAAGGAGGTTTCATTGGCATTGCCCGATCAGATTGACGTAGCAATTAAGTACATAAAAGATCTGGAGAAGAAAGTGAATTCAGCTAAAGAAAAGAAAAATCGATTACAAGGGAAAAACAAAAGCGCCATAAACATGGATTCTTCTTCTTCGTCTTCTCCTCAGCTTAAAATAAACCAAATGGGTAAAAGTTTAGAGATAGTTTTAAGCAGTGGAATCGATAATCAGTATCTGTTATGTGAAACCCTTAGGATTCTTCAAGAAGAAGGCATTGAAGTTGTTAATGCAAGCTTCTCTGTTTCTGGGAAATCTGTTTTTCACACCATCCATGCAGAACTTGGTGATTCGATGGTCGAATTTGGGACGACGAAAGCGACGGAGAGATTGAAGAGATTGGTTTACGGATCGAACAGTGATGTTGAATTGCAGAAGGAGAAGCAATGGTGGGAAGAATTTCCATCTGAGAATTGGGATATTTAA

Protein sequence

MEYPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEKKVNSAKEKKNRLQGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGIDNQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYGSNSDVELQKEKQWWEEFPSENWDI*
Homology
[Close]
BLAST of MELO3C018728T1 vs. Swiss-Prot
Match: BH036_ARATH (Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.7e-08
Identity = 44/172 (25.58%), Postives = 83/172 (48.26%), Query Frame = 1 

Query: 17  KIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEKKVNSAK 76
           K+  R  E+ RR +M +L   L+SL+P  + K    +  DQ++ A+ YIK L++K+    
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFIKG-KRSTSDQVNEAVNYIKYLQRKIKELS 62

Query: 77  EKKNRLQGKNKSAINMDSSS---------SSSPQLKINQMGKSLEIVLSSG-IDNQYLLC 136
            +++ L   ++ ++   S+          S    + + Q    +EI+LSS     Q    
Sbjct: 63  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQPRFS 122

Query: 137 ETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRL 179
             L++L E G+ ++N+  S+    + +TI AE+ D  +     +  +RL R+
Sbjct: 123 SVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRM 173

[Close]
BLAST of MELO3C018728T1 vs. Swiss-Prot
Match: BH118_ARATH (Transcription factor bHLH118 OS=Arabidopsis thaliana GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.8e-07
Identity = 46/165 (27.88%), Postives = 80/165 (48.48%), Query Frame = 1 

Query: 17  KIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLE---KKVN 76
           K+  + IEK RR +M +L   L+SL+P ++  +   +  DQ+  A+ YI  L+   K +N
Sbjct: 3   KLVHKEIEKRRRQEMASLYASLRSLLPLEFI-QGKRSTSDQVKGAVNYIDYLQRNIKDIN 62

Query: 77  SAKEKKNRLQGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGIDNQYLLCETLRILQ 136
           S ++    L G++  + N    +  S  + I      +EIVLS     Q      L++L+
Sbjct: 63  SKRDDLVLLSGRSFRSSNEQEWNEISNHVVIRPCLVGIEIVLSI---LQTPFSSVLQVLR 122

Query: 137 EEGIEVVNASFSVSGKSVFHTIHAELGD-SMVEFGTTKATERLKR 178
           E G+ V+    S     + HT+ AE+ D ++++    K T  L +
Sbjct: 123 EHGLYVLGYICSSVNDRLIHTLQAEVNDLALIDLADLKDTLTLMK 163

[Close]
BLAST of MELO3C018728T1 vs. Swiss-Prot
Match: BH126_ARATH (Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.1e-06
Identity = 38/154 (24.68%), Postives = 69/154 (44.81%), Query Frame = 1 

Query: 17  KIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEKKVNSAK 76
           K+  R IE+ RR +M  L   L++ +P +Y K    A+ D ++ A+ +IKD E ++    
Sbjct: 44  KLLHRDIERQRRQEMATLFATLRTHLPLKYIKG-KRAVSDHVNGAVNFIKDTEARIKELS 103

Query: 77  EKKNRL---------QGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGIDNQYL--L 136
            +++ L            +      D   S    + +      LE+V+SS         L
Sbjct: 104 ARRDELSRETGQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPL 163

Query: 137 CETLRILQEEGIEVVNASFSVSGKSVFHTIHAEL 160
            + L  +QE+G+EV+++  +     + HTI  E+
Sbjct: 164 SKVLETIQEKGLEVMSSFTTRVNDRLMHTIQVEV 196

[Close]
BLAST of MELO3C018728T1 vs. Swiss-Prot
Match: BH055_ARATH (Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.3e-06
Identity = 46/183 (25.14%), Postives = 86/183 (46.99%), Query Frame = 1 

Query: 17  KIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEKKVNSAK 76
           + + + +E+ RR +  +L   L+ L+P QY K    +  D +  A+ YIKDL+KK+    
Sbjct: 76  RAKHKELERQRRQENTSLFKILRYLLPSQYIKG-KRSSADHVLEAVNYIKDLQKKIKEVS 135

Query: 77  EKKNRLQ-------GKNKSAINMDSSSSSS------PQLKINQMGKSLEIVLSSGIDNQY 136
           EK++R++        + + +I   +SS+ S        + +      LEIV+S    ++ 
Sbjct: 136 EKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSCCNRHES 195

Query: 137 LLCETLRIL-QEEGIEVVNASFSVSGKSVFHTI-----------HAELGDSMVEFGTTKA 175
            L   L++L QE+   +V+   +   +   HTI            +EL + +++ GT++ 
Sbjct: 196 CLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEVEEGIEVYFSELQEKIIKIGTSRV 255

[Close]
BLAST of MELO3C018728T1 vs. Swiss-Prot
Match: BH120_ARATH (Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 7.0e-06
Identity = 38/153 (24.84%), Postives = 74/153 (48.37%), Query Frame = 1 

Query: 17  KIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEKKVNSAK 76
           K+  R IE+ RR +M  L   L+S +P +Y K    A+ D ++ A+ +IKD + ++    
Sbjct: 28  KLLHRNIERQRRQEMAILFASLRSQLPLKYIKG-KRAMSDHVNGAVSFIKDTQTRIKDLS 87

Query: 77  EKKNRLQGK-------NKSAINMDSSSSSSPQLKINQMGKSLEIV---LSSGIDNQYLLC 136
            +++ L+ +         S     SS S    + +       E+V   L+SG++  + L 
Sbjct: 88  ARRDELKREIGDPTSLTGSGSGSGSSRSEPASVMVQPCVSGFEVVVSSLASGLE-AWPLS 147

Query: 137 ETLRILQEEGIEVVNASFSVSGKSVFHTIHAEL 160
             L +L  +G+EV+++  +   + + +TI  E+
Sbjct: 148 RVLEVLHGQGLEVISSLTARVNERLMYTIQVEV 178

[Close]
BLAST of MELO3C018728T1 vs. TrEMBL
Match: A0A0A0K2C9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048070 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 1.9e-95
Identity = 187/207 (90.34%), Postives = 194/207 (93.72%), Query Frame = 1 

Query: 4   PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIK 63
           PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQ SKEVSLALPDQIDVAIK
Sbjct: 3   PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVAIK 62

Query: 64  YIKDLEKKVNSAKEKKNRLQGKNKSAINMD-----SSSSSSPQLKINQMGKSLEIVLSSG 123
           YIKDLEK+VNSAKEKKNRLQGKNKSAINMD     SSSSSSPQLKINQMGKSLEI+LSSG
Sbjct: 63  YIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILSSG 122

Query: 124 IDNQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRL 183
            DNQYLLCETLRIL+EEG EVV+ASFSVSG SVFHTIHA+LGDSMVEFG TKATERL RL
Sbjct: 123 NDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLTRL 182

Query: 184 VYGSNSDVELQK-EKQWWEEFPSENWD 205
           VY SNSDVELQK EKQWW+EFPSENW+
Sbjct: 183 VYRSNSDVELQKEEKQWWKEFPSENWE 209

[Close]
BLAST of MELO3C018728T1 vs. TrEMBL
Match: M5VT39_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018357mg PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.3e-46
Identity = 105/201 (52.24%), Postives = 142/201 (70.65%), Query Frame = 1 

Query: 11  SSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEK 70
           S S++ K+ERR+IEKNRRNQMK L  +L SL+P+Q S+E  L+LPDQID AI YIK LE 
Sbjct: 7   SQSSSTKVERRVIEKNRRNQMKVLYSKLNSLLPRQNSQE-PLSLPDQIDEAINYIKSLET 66

Query: 71  KVNSAKEKKNRLQGKNK----SAINMDSSSSSSP-QLKINQMGKSLEIVLSSGIDN-QYL 130
           K+  +KEK++ L+GK K    +  N DS   S P Q++I++MG +LE+VL SG+DN Q++
Sbjct: 67  KLQKSKEKRDSLKGKKKRSHTACTNFDSMRCSKPPQIEIHEMGSTLEVVLISGLDNHQFM 126

Query: 131 LCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYGSNS 190
             E +RI+ EE  +VV+AS S  G S+FH I AE+G SM++FG  K TE+L+R V GS S
Sbjct: 127 FTEIIRIVHEEQADVVHASLSTLGDSIFHVIRAEVGKSMIDFGAAKITEKLRRFVNGSTS 186

Query: 191 DVELQKEKQW-WEEFPSENWD 205
           D ELQ+E  W +E +P   WD
Sbjct: 187 DEELQREYLWDFEIYPETLWD 206

[Close]
BLAST of MELO3C018728T1 vs. TrEMBL
Match: W9RA84_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010338 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.1e-45
Identity = 103/192 (53.65%), Postives = 140/192 (72.92%), Query Frame = 1 

Query: 11  SSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEK 70
           S S+A KIERRIIEKNRRNQMK L  +L SL+P Q SKEV   LPDQ+D AI +IK LE 
Sbjct: 22  SQSSATKIERRIIEKNRRNQMKVLYSKLNSLLPPQNSKEVQ-TLPDQVDEAINHIKSLEA 81

Query: 71  KVNSAKEKKNRLQGKNKS---AINMDS-SSSSSPQLKINQMGKSLEIVLSSGIDNQYLLC 130
           ++   KEKK  L G+ +S   A +++S  S  SPQ++I+++G  +E+VL +G+DNQ++  
Sbjct: 82  RLKKYKEKKKSLLGRKRSYTCANSLESVGSQRSPQIEIHEIGSVIEVVLITGLDNQFIFY 141

Query: 131 ETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYGSNSDV 190
           E +RIL EE  +VV+A +SVS  S+FH +HAE+ DS+  FG TK +ERLKR V GS+SD+
Sbjct: 142 ELIRILHEERADVVDAKYSVSRDSIFHVVHAEIADSI--FGATKISERLKRFVSGSSSDI 201

Query: 191 ELQKEKQWWEEF 199
           ELQ + QWW++F
Sbjct: 202 ELQPD-QWWDDF 209

[Close]
BLAST of MELO3C018728T1 vs. TrEMBL
Match: A0A067JJH0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25773 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.1e-45
Identity = 96/197 (48.73%), Postives = 137/197 (69.54%), Query Frame = 1 

Query: 12  SSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEKK 71
           S+++ K ER++IEKNRRNQMK L   L SL+P++ +KE +L LPDQID AI YIK LE +
Sbjct: 31  SASSTKTERKVIEKNRRNQMKTLFSNLNSLLPKENAKE-ALPLPDQIDEAINYIKSLEAR 90

Query: 72  VNSAKEKKNRLQGKNKSAINMDSSSSSS-----PQLKINQMGKSLEIVLSSGIDNQYLLC 131
           +  ++EKK RL  K +S  +  +S  S+     PQL+I ++G +L+I L SG+DNQ+L C
Sbjct: 91  LKKSQEKKERLSSKKRSFSDYSNSCESTSTLKAPQLQIREVGSALQITLISGLDNQFLFC 150

Query: 132 ETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYGSNSDV 191
           E +RILQEE +E+VNASFSV+  S+FH +HA++ +S   FG  K +ERL RL+ GS S++
Sbjct: 151 EMIRILQEENVEIVNASFSVAASSIFHVVHAQMRESDFMFGGAKVSERLNRLINGSTSEI 210

Query: 192 ELQKEKQWWEEFPSENW 204
           EL+ E   + +   E W
Sbjct: 211 ELEPELWDFNDLNPETW 226

[Close]
BLAST of MELO3C018728T1 vs. TrEMBL
Match: V4U3N5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016466mg PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.1e-45
Identity = 100/203 (49.26%), Postives = 139/203 (68.47%), Query Frame = 1 

Query: 11  SSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEK 70
           SSS+  KIER+ IEKNRR+QMKNL   LKSL+P Q SKE  L+LPDQ+D AI YIK LE 
Sbjct: 39  SSSSPTKIERKTIEKNRRDQMKNLYSTLKSLLPNQPSKE-ELSLPDQVDEAINYIKMLET 98

Query: 71  KVNSAKEKKNRLQGKNKS---------AINMDSSSSSSPQLKINQMGKSLEIVLSSGIDN 130
           K+   K+KK  LQG+ +S         A  M SSS  +P+++I++MG +LE++L+SG+D+
Sbjct: 99  KLKECKKKKESLQGRERSHACISDGTEARLMTSSSPKAPEIEIHEMGSNLEVILTSGVDD 158

Query: 131 QYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYG 190
           Q++  + +RIL ++G E++NA+FSV G ++FH IHAE+ DSM  FG  K +ERLK  V G
Sbjct: 159 QFIFYDVIRILHQDGAEILNANFSVVGNTIFHVIHAEIRDSMFGFGAAKISERLKGFVSG 218

Query: 191 SNSDVELQKEKQWWEEFPSENWD 205
             S+ E+Q  + W  E   E W+
Sbjct: 219 CASEGEMQLPELWDFEINPELWE 240

[Close]
BLAST of MELO3C018728T1 vs. TAIR10
Match: AT4G20970.1 (AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 4.3e-22
Identity = 60/184 (32.61%), Postives = 106/184 (57.61%), Query Frame = 1 

Query: 10  ASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLE 69
           +++  +  ++R+ +EKNRR QMK+L  +L SL+P   S E  L LPDQ+D A  YIK L+
Sbjct: 6   SNTGQSRSVDRKTVEKNRRMQMKSLYSELISLLPHHSSTE-PLTLPDQLDEAANYIKKLQ 65

Query: 70  KKVNSAKEKKNRLQG----KNKSAINMDSSSSS--------SPQLKINQMGKSLEIVLSS 129
             V   +E+K  L      +  +++   S SSS         P+++I + G    I L +
Sbjct: 66  VNVEKKRERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVT 125

Query: 130 GIDNQYLLCETLRILQEE-GIEVVNASFSVSGKSVFHTIHAELGDSMVEFGT-TKATERL 180
            ++++++ CE +R+L EE G E+ +A +S+   +VFHT+H ++ +   ++G  ++  ERL
Sbjct: 126 SLEHKFMFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEEH--DYGARSQIPERL 185

[Close]
BLAST of MELO3C018728T1 vs. TAIR10
Match: AT1G10585.1 (AT1G10585.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 67.8 bits (164), Expect = 9.0e-12
Identity = 52/177 (29.38%), Postives = 90/177 (50.85%), Query Frame = 1 

Query: 7   QFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIK 66
           +    +S++ + +R + EK+RR +MK+L   L S V    S    L +P  ID A  Y+ 
Sbjct: 6   EIGEGNSSSLREQRNLREKDRRMRMKHLFSILSSHV----SPTRKLPVPHLIDQATSYMI 65

Query: 67  DLEKKVNSAKEKKNR-LQGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGID-NQYL 126
            L++ VN  KEKK   LQG+     N+   S   P+L I     ++E+ L   ++  + +
Sbjct: 66  QLKENVNYLKEKKRTLLQGE---LGNLYEGSFLLPKLSIRSRDSTIEMNLIMDLNMKRVM 125

Query: 127 LCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYG 182
           L E + I +EEG +V++A+         +TI A+   S +    ++  ER+++++YG
Sbjct: 126 LHELVSIFEEEGAQVMSANLQNLNDRTTYTIIAQAIISRIGIDPSRIEERVRKIIYG 175

[Close]
BLAST of MELO3C018728T1 vs. TAIR10
Match: AT5G51780.1 (AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 58.5 bits (140), Expect = 5.5e-09
Identity = 44/172 (25.58%), Postives = 83/172 (48.26%), Query Frame = 1 

Query: 17  KIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEKKVNSAK 76
           K+  R  E+ RR +M +L   L+SL+P  + K    +  DQ++ A+ YIK L++K+    
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFIKG-KRSTSDQVNEAVNYIKYLQRKIKELS 62

Query: 77  EKKNRLQGKNKSAINMDSSS---------SSSPQLKINQMGKSLEIVLSSG-IDNQYLLC 136
            +++ L   ++ ++   S+          S    + + Q    +EI+LSS     Q    
Sbjct: 63  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQPRFS 122

Query: 137 ETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRL 179
             L++L E G+ ++N+  S+    + +TI AE+ D  +     +  +RL R+
Sbjct: 123 SVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRM 173

[Close]
BLAST of MELO3C018728T1 vs. TAIR10
Match: AT4G25400.1 (AT4G25400.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.7e-08
Identity = 46/165 (27.88%), Postives = 80/165 (48.48%), Query Frame = 1 

Query: 17  KIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLE---KKVN 76
           K+  + IEK RR +M +L   L+SL+P ++  +   +  DQ+  A+ YI  L+   K +N
Sbjct: 3   KLVHKEIEKRRRQEMASLYASLRSLLPLEFI-QGKRSTSDQVKGAVNYIDYLQRNIKDIN 62

Query: 77  SAKEKKNRLQGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGIDNQYLLCETLRILQ 136
           S ++    L G++  + N    +  S  + I      +EIVLS     Q      L++L+
Sbjct: 63  SKRDDLVLLSGRSFRSSNEQEWNEISNHVVIRPCLVGIEIVLSI---LQTPFSSVLQVLR 122

Query: 137 EEGIEVVNASFSVSGKSVFHTIHAELGD-SMVEFGTTKATERLKR 178
           E G+ V+    S     + HT+ AE+ D ++++    K T  L +
Sbjct: 123 EHGLYVLGYICSSVNDRLIHTLQAEVNDLALIDLADLKDTLTLMK 163

[Close]
BLAST of MELO3C018728T1 vs. TAIR10
Match: AT4G25410.1 (AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-07
Identity = 38/154 (24.68%), Postives = 69/154 (44.81%), Query Frame = 1 

Query: 17  KIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEKKVNSAK 76
           K+  R IE+ RR +M  L   L++ +P +Y K    A+ D ++ A+ +IKD E ++    
Sbjct: 44  KLLHRDIERQRRQEMATLFATLRTHLPLKYIKG-KRAVSDHVNGAVNFIKDTEARIKELS 103

Query: 77  EKKNRL---------QGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGIDNQYL--L 136
            +++ L            +      D   S    + +      LE+V+SS         L
Sbjct: 104 ARRDELSRETGQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPL 163

Query: 137 CETLRILQEEGIEVVNASFSVSGKSVFHTIHAEL 160
            + L  +QE+G+EV+++  +     + HTI  E+
Sbjct: 164 SKVLETIQEKGLEVMSSFTTRVNDRLMHTIQVEV 196

[Close]
BLAST of MELO3C018728T1 vs. NCBI nr
Match: gi|659110598|ref|XP_008455310.1| (PREDICTED: transcription factor bHLH101-like [Cucumis melo])

HSP 1 Score: 402.5 bits (1033), Expect = 4.4e-109
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 1 

Query: 1   MEYPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDV 60
           MEYPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDV
Sbjct: 1   MEYPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDV 60

Query: 61  AIKYIKDLEKKVNSAKEKKNRLQGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGID 120
           AIKYIKDLEKKVNSAKEKKNRLQGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGID
Sbjct: 61  AIKYIKDLEKKVNSAKEKKNRLQGKNKSAINMDSSSSSSPQLKINQMGKSLEIVLSSGID 120

Query: 121 NQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVY 180
           NQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVY
Sbjct: 121 NQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVY 180

Query: 181 GSNSDVELQKEKQWWEEFPSENWDI 206
           GSNSDVELQKEKQWWEEFPSENWDI
Sbjct: 181 GSNSDVELQKEKQWWEEFPSENWDI 205

[Close]
BLAST of MELO3C018728T1 vs. NCBI nr
Match: gi|778730135|ref|XP_011659708.1| (PREDICTED: transcription factor bHLH125-like [Cucumis sativus])

HSP 1 Score: 356.7 bits (914), Expect = 2.8e-95
Identity = 187/207 (90.34%), Postives = 194/207 (93.72%), Query Frame = 1 

Query: 4   PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIK 63
           PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQ SKEVSLALPDQIDVAIK
Sbjct: 3   PNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVAIK 62

Query: 64  YIKDLEKKVNSAKEKKNRLQGKNKSAINMD-----SSSSSSPQLKINQMGKSLEIVLSSG 123
           YIKDLEK+VNSAKEKKNRLQGKNKSAINMD     SSSSSSPQLKINQMGKSLEI+LSSG
Sbjct: 63  YIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILSSG 122

Query: 124 IDNQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRL 183
            DNQYLLCETLRIL+EEG EVV+ASFSVSG SVFHTIHA+LGDSMVEFG TKATERL RL
Sbjct: 123 NDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLTRL 182

Query: 184 VYGSNSDVELQK-EKQWWEEFPSENWD 205
           VY SNSDVELQK EKQWW+EFPSENW+
Sbjct: 183 VYRSNSDVELQKEEKQWWKEFPSENWE 209

[Close]
BLAST of MELO3C018728T1 vs. NCBI nr
Match: gi|595790223|ref|XP_007198864.1| (hypothetical protein PRUPE_ppa018357mg [Prunus persica])

HSP 1 Score: 192.2 bits (487), Expect = 9.0e-46
Identity = 105/201 (52.24%), Postives = 142/201 (70.65%), Query Frame = 1 

Query: 11  SSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEK 70
           S S++ K+ERR+IEKNRRNQMK L  +L SL+P+Q S+E  L+LPDQID AI YIK LE 
Sbjct: 7   SQSSSTKVERRVIEKNRRNQMKVLYSKLNSLLPRQNSQE-PLSLPDQIDEAINYIKSLET 66

Query: 71  KVNSAKEKKNRLQGKNK----SAINMDSSSSSSP-QLKINQMGKSLEIVLSSGIDN-QYL 130
           K+  +KEK++ L+GK K    +  N DS   S P Q++I++MG +LE+VL SG+DN Q++
Sbjct: 67  KLQKSKEKRDSLKGKKKRSHTACTNFDSMRCSKPPQIEIHEMGSTLEVVLISGLDNHQFM 126

Query: 131 LCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYGSNS 190
             E +RI+ EE  +VV+AS S  G S+FH I AE+G SM++FG  K TE+L+R V GS S
Sbjct: 127 FTEIIRIVHEEQADVVHASLSTLGDSIFHVIRAEVGKSMIDFGAAKITEKLRRFVNGSTS 186

Query: 191 DVELQKEKQW-WEEFPSENWD 205
           D ELQ+E  W +E +P   WD
Sbjct: 187 DEELQREYLWDFEIYPETLWD 206

[Close]
BLAST of MELO3C018728T1 vs. NCBI nr
Match: gi|645245688|ref|XP_008228998.1| (PREDICTED: transcription factor bHLH36-like [Prunus mume])

HSP 1 Score: 190.7 bits (483), Expect = 2.6e-45
Identity = 105/201 (52.24%), Postives = 142/201 (70.65%), Query Frame = 1 

Query: 11  SSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEK 70
           S S++ K+ERR+IEKNRRNQMK L  +L SL+P+Q S+E   +LPDQID AI YIK LE 
Sbjct: 23  SQSSSTKVERRVIEKNRRNQMKVLYSKLNSLLPRQNSQEPP-SLPDQIDEAINYIKSLES 82

Query: 71  KVNSAKEKKNRLQGKNK----SAINMDSSSSSSP-QLKINQMGKSLEIVLSSGIDN-QYL 130
           K+  +KEK++ L+G  K    +  N DS  SS P Q++I+++G +LE+VL SG+DN Q++
Sbjct: 83  KLQKSKEKRDSLKGNRKRSHTACTNFDSMRSSKPPQIEIHEIGSTLEVVLISGLDNHQFM 142

Query: 131 LCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYGSNS 190
           L E +RIL EE  +VV+AS S  G S+FH I AE+G SM++FG  K TE+L+R V GS S
Sbjct: 143 LTEIIRILHEEQADVVHASLSTLGDSIFHVIRAEMGKSMLDFGAAKITEKLRRFVDGSTS 202

Query: 191 DVELQKEKQW-WEEFPSENWD 205
           D ELQ+E  W +E +P   WD
Sbjct: 203 DEELQREYLWDFEIYPETIWD 222

[Close]
BLAST of MELO3C018728T1 vs. NCBI nr
Match: gi|703080720|ref|XP_010091496.1| (hypothetical protein L484_010338 [Morus notabilis])

HSP 1 Score: 189.9 bits (481), Expect = 4.5e-45
Identity = 103/192 (53.65%), Postives = 140/192 (72.92%), Query Frame = 1 

Query: 11  SSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAIKYIKDLEK 70
           S S+A KIERRIIEKNRRNQMK L  +L SL+P Q SKEV   LPDQ+D AI +IK LE 
Sbjct: 22  SQSSATKIERRIIEKNRRNQMKVLYSKLNSLLPPQNSKEVQ-TLPDQVDEAINHIKSLEA 81

Query: 71  KVNSAKEKKNRLQGKNKS---AINMDS-SSSSSPQLKINQMGKSLEIVLSSGIDNQYLLC 130
           ++   KEKK  L G+ +S   A +++S  S  SPQ++I+++G  +E+VL +G+DNQ++  
Sbjct: 82  RLKKYKEKKKSLLGRKRSYTCANSLESVGSQRSPQIEIHEIGSVIEVVLITGLDNQFIFY 141

Query: 131 ETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYGSNSDV 190
           E +RIL EE  +VV+A +SVS  S+FH +HAE+ DS+  FG TK +ERLKR V GS+SD+
Sbjct: 142 ELIRILHEERADVVDAKYSVSRDSIFHVVHAEIADSI--FGATKISERLKRFVSGSSSDI 201

Query: 191 ELQKEKQWWEEF 199
           ELQ + QWW++F
Sbjct: 202 ELQPD-QWWDDF 209

The following BLAST results are available for this feature:
BLAST of MELO3C018728T1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH036_ARATH9.7e-0825.58Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1[more]
BH118_ARATH4.8e-0727.88Transcription factor bHLH118 OS=Arabidopsis thaliana GN=BHLH118 PE=2 SV=1[more]
BH126_ARATH4.1e-0624.68Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1[more]
BH055_ARATH5.3e-0625.14Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1[more]
BH120_ARATH7.0e-0624.84Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2[more]
BLAST of MELO3C018728T1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2C9_CUCSA1.9e-9590.34Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048070 PE=4 SV=1[more]
M5VT39_PRUPE6.3e-4652.24Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018357mg PE=4 SV=1[more]
W9RA84_9ROSA3.1e-4553.65Uncharacterized protein OS=Morus notabilis GN=L484_010338 PE=4 SV=1[more]
A0A067JJH0_JATCU4.1e-4548.73Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25773 PE=4 SV=1[more]
V4U3N5_9ROSI4.1e-4549.26Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016466mg PE=4 SV=1[more]
BLAST of MELO3C018728T1 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G20970.14.3e-2232.61 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G10585.19.0e-1229.38 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G51780.15.5e-0925.58 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G25400.12.7e-0827.88 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G25410.12.3e-0724.68 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of MELO3C018728T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110598|ref|XP_008455310.1|4.4e-109100.00PREDICTED: transcription factor bHLH101-like [Cucumis melo][more]
gi|778730135|ref|XP_011659708.1|2.8e-9590.34PREDICTED: transcription factor bHLH125-like [Cucumis sativus][more]
gi|595790223|ref|XP_007198864.1|9.0e-4652.24hypothetical protein PRUPE_ppa018357mg [Prunus persica][more]
gi|645245688|ref|XP_008228998.1|2.6e-4552.24PREDICTED: transcription factor bHLH36-like [Prunus mume][more]
gi|703080720|ref|XP_010091496.1|4.5e-4553.65hypothetical protein L484_010338 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR015660MASH1/Ascl1a-like
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO:0003677DNA binding
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C018728MELO3C018728gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C018728T1MELO3C018728T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C018728T1.cds3MELO3C018728T1.cds3CDS
MELO3C018728T1.cds2MELO3C018728T1.cds2CDS
MELO3C018728T1.cds1MELO3C018728T1.cds1CDS


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 20..88
score: 1.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 21..69
score: 4.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 15..68
score: 11
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 17..87
score: 7.33
IPR015660Achaete-scute transcription factor-relatedPANTHERPTHR13935ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATEDcoord: 9..191
score: 4.4
NoneNo IPR availableunknownCoilCoilcoord: 58..92
scor
NoneNo IPR availablePANTHERPTHR13935:SF53BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEINcoord: 9..191
score: 4.4