MELO3C018643 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C018643
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Copper-transporting ATPase, putative
Location	chr1 : 1727295 .. 1730828 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATTTTTTGAAGAAAAGTGGGGGAAAAACTGACGGACACAAAAGCGCCCATCAGTCGAGTGGTTGACCATTTTTCTCTACCCGGAGAGATTCATTTCTTCCATGGATTCCGCCATCTCTCTAATGGCCTCCAATTCCTTTCTCTCTACTCTCTCCACCATCCCCCGCAGCTCCTTCACCTCCATTTCCACTATCTCAACTCTTTCTTTCCCGCTTCGAGCTGCTCTTCCTCCCATACACCGTCGTCAGAAATTCGTCTCCGTTTTTGCTTCAGGTAATGGCAATGGCGGCGTTCGAGGAGAGAGCGGCGGCGGAGGTGGTGGCGGCGATGATGGTGGACCAAACGGCAGCGATGTCGACTCGAAATTGCTTGCTGGAGAAGCTGACGACGATGCCACGCTGTCTGCAGACGTCATTGTTATCGGTGTTGGAGTATGAGACGAGTTCTACATGTTTTCGGGTTTCGATTGGTGCTAATTTTGATGGGTTTTGTTCTCTTTGGTATAGGGGATGACGTGCAAGGGGTGTTGTGCGAGTGTCAAGAGGATCCTTGAAAGTCAGGTGGTTATATATACTTTTGCTTTCTTCTTGTCTGTTTTACTTGTCATTATCTAAGTAAGAGAGATGAGCTATTTGCCAATTGGTTTTGGGAAGAATCCATGTTATCCAATAGTATCAAAACCCTTAGAGCCCAAATGCACCTTAAGTTGAGATTCCACATTAGACGAATCGAAAGACCTCACAATGCAAATAGATGGCTACTCCTACTATTGGTACTTGGGTTTTGAGAAGAACCCATATTATCAATAGACTAATCCCTATTTTTTTAGTTGCTGGTTGAATTTACAATCTATGGTTGAATTTACAATGTAGAAACTGCATAGTGTAGGACTTGATTGTTTTTTCTTATCCTAAAAACAATTTTCTGTTGTTTGATTGATATCTAAGAATAAGAGATCGAAGAGGGATTGTTACAGGGTATAATTGCATTTTCAGTATTGAAATTACTTGTTTTACATTTCTAGCTCTCCTCTACTGGTGTTAAAGAATATATATGTGGAAGATTAAATTTATCATAATCAACCAGCTTAGATTTTTTAATTGACCACGGTTTGATATGGTATTAAAGGTGAACATGCGGCTTGATAATTTCATTTTCTTTTCAATCAGTATTGATTTTAAACTGCCAGTAAGACTACAGACTTTCTCTGCCCTCTAAGTAATTCTTCATTGTTATTCTTTTTGTATTATGGATAGCCACAAGTGTCACATGCTAGTGTTGACCTTGCTTCTGAGACGGCAATCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGAGGGAAGAGCTAGGAGTGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCGAAGGTTCAAGGTCAGCAAGCACCATAAATTCATAACTCATTAGTCGCAACTCATAATCATATCTGATTCCTTGTGTTAGCTTCCTCTTTCTACTTTTGTTGTTGCTGTCAAGATTGCCACTTTCAGATCTTAAGATTTTTTCTTTG

mRNA sequence

ACATTTTTTGAAGAAAAGTGGGGGAAAAACTGACGGACACAAAAGCGCCCATCAGTCGAGTGGTTGACCATTTTTCTCTACCCGGAGAGATTCATTTCTTCCATGGATTCCGCCATCTCTCTAATGGCCTCCAATTCCTTTCTCTCTACTCTCTCCACCATCCCCCGCAGCTCCTTCACCTCCATTTCCACTATCTCAACTCTTTCTTTCCCGCTTCGAGCTGCTCTTCCTCCCATACACCGTCGTCAGAAATTCGTCTCCGTTTTTGCTTCAGGTAATGGCAATGGCGGCGTTCGAGGAGAGAGCGGCGGCGGAGGTGGTGGCGGCGATGATGGTGGACCAAACGGCAGCGATGTCGACTCGAAATTGCTTGCTGGAGAAGCTGACGACGATGCCACGCTGTCTGCAGACGTCATTGTTATCGGTGTTGGAGGGATGACGTGCAAGGGGTGTTGTGCGAGTGTCAAGAGGATCCTTGAAAGTCAGCCACAAGTGTCACATGCTAGTGTTGACCTTGCTTCTGAGACGGCAATCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGAGGGAAGAGCTAGGAGTGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCGAAGGTTCAAGGTCAGCAAGCACCATAAATTCATAACTCATTAGTCGCAACTCATAATCATATCTGATTCCTTGTGTTAGCTTCCTCTTTCTACTTTTGTTGTTGCTGTCAAGATTGCCACTTTCAGATCTTAAGATTTTTTCTTTG

Coding sequence (CDS)

ATGGATTCCGCCATCTCTCTAATGGCCTCCAATTCCTTTCTCTCTACTCTCTCCACCATCCCCCGCAGCTCCTTCACCTCCATTTCCACTATCTCAACTCTTTCTTTCCCGCTTCGAGCTGCTCTTCCTCCCATACACCGTCGTCAGAAATTCGTCTCCGTTTTTGCTTCAGGTAATGGCAATGGCGGCGTTCGAGGAGAGAGCGGCGGCGGAGGTGGTGGCGGCGATGATGGTGGACCAAACGGCAGCGATGTCGACTCGAAATTGCTTGCTGGAGAAGCTGACGACGATGCCACGCTGTCTGCAGACGTCATTGTTATCGGTGTTGGAGGGATGACGTGCAAGGGGTGTTGTGCGAGTGTCAAGAGGATCCTTGAAAGTCAGCCACAAGTGTCACATGCTAGTGTTGACCTTGCTTCTGAGACGGCAATCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGAGGGAAGAGCTAGGAGTGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCGAAGGTTCAAGGTCAGCAAGCACCATAA

Protein sequence

MDSAISLMASNSFLSTLSTIPRSSFTSISTISTLSFPLRAALPPIHRRQKFVSVFASGNGNGGVRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQQAP*

Homology

[Close]

BLAST of MELO3C018643 vs. Swiss-Prot
Match: HMA6_ARATH (Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.7e-33
Identity = 83/163 (50.92%), Postives = 100/163 (61.35%), Query Frame = 1


Query: 23  SSFTSISTISTLSFPLRAALPPIHRRQKFVSVFA---------SGNGNGGVRGESGGGGG 82
           S FTS +  S L     A LP I  R + +S  +          G+G GG  G SGGGGG
Sbjct: 65  SRFTSSN--SALRSLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGG 124

Query: 83  GGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCASVKRILESQPQVSH 142
           GG + G    D  SKL A  +D  +  S+D+I++ VGGMTC GC ASVK+ILESQPQV+ 
Sbjct: 125 GGSESG----DSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVAS 184

Query: 143 ASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS 177
           ASV+L +ETAIVWPV EAK  P+W++ LG  LA HLT CGF S
Sbjct: 185 ASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of MELO3C018643 vs. TrEMBL
Match: A0A0A0K5Z3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G062830 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 7.8e-88
Identity = 168/183 (91.80%), Postives = 173/183 (94.54%), Query Frame = 1


Query: 1   MDSAISLMASNSFLSTLSTIPRSSFTSISTISTLSFPLRAALPPIHRRQKFVSVFASGNG 60
           MDSAISLMASNSFLSTLS+      TS+STISTLSFP RAALPPIHRRQKF+S+FASGNG
Sbjct: 1   MDSAISLMASNSFLSTLSS------TSVSTISTLSFPRRAALPPIHRRQKFISIFASGNG 60

Query: 61  NGGVRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCAS 120
           NGGVRGESGGGGGGGDDGGP GSDVDSKLLAGEADDDATLSADVIV+GV GMTCKGCCAS
Sbjct: 61  NGGVRGESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCAS 120

Query: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180
           VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG
Sbjct: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 177

Query: 181 QQA 184
           Q A
Sbjct: 181 QGA 177

[Close]

BLAST of MELO3C018643 vs. TrEMBL
Match: M0U5M3_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-32
Identity = 73/123 (59.35%), Postives = 89/123 (72.36%), Query Frame = 1


Query: 57  SGNGNGGVRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKG 116
           SG+G GG  G  GG GGGG DGG +G +  +K +AG+ +D   L ADVIV+ VGGM+C G
Sbjct: 86  SGSGGGG-DGVDGGSGGGGGDGGSSGGETVAKPVAGDLEDVPALGADVIVLHVGGMSCGG 145

Query: 117 CCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS 176
           C ASVKRILESQPQVS A V+L  E A +W V EAK+  +W++ELG  LAKHLTTCGF S
Sbjct: 146 CAASVKRILESQPQVSSAIVNLEKEMAFIWTVPEAKVVQDWQQELGEKLAKHLTTCGFKS 205

Query: 177 KVQ 180
            +Q
Sbjct: 206 NLQ 207

[Close]

BLAST of MELO3C018643 vs. TrEMBL
Match: A0A0D9Z8A1_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.3e-29
Identity = 75/172 (43.60%), Postives = 102/172 (59.30%), Query Frame = 1


Query: 29  STISTLSF-PLRAALPPI----HRRQKFVSVFASGN-----------GNGGVRGESGGGG 88
           + ++ LSF PL AA  P+     R + F S+ +S +           G GG RG  GGGG
Sbjct: 70  AAVTRLSFVPLAAAARPLLAGFMRPRVFASISSSSSPFSGGGGGRFFGGGGGRGRGGGGG 129

Query: 89  GGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCASVKRILESQPQVS 148
           GGG++ G   +   S   A    +  T  ADVI++ VGGM+C GC ASVKRILESQP+V+
Sbjct: 130 GGGEESGAGAAAAASAAAAVVLGETETADADVILLRVGGMSCGGCAASVKRILESQPEVT 189

Query: 149 HASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQQAP 185
            A+VD   +TA VW   EAK T +WR++LG  L+ HL+TCGF S +  ++ P
Sbjct: 190 SATVDFEKKTAAVWTTPEAKATKDWRKQLGEKLSHHLSTCGFQSHLLDEEEP 241

[Close]

BLAST of MELO3C018643 vs. TrEMBL
Match: B8AQL4_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11856 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-28
Identity = 75/174 (43.10%), Postives = 102/174 (58.62%), Query Frame = 1


Query: 29  STISTLSF-PLRAALPPI----HRRQKFVSVFASGN-------------GNGGVRGESGG 88
           + ++ LSF PL AA  P+     R + F S+ +S +             G GG RG  GG
Sbjct: 5   AAVTRLSFVPLAAAARPLLAGFMRPRVFASISSSSSSSPFSGGGGGRFFGGGGGRGRGGG 64

Query: 89  GGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCASVKRILESQPQ 148
           GGGGG++ G   +   S   A    +  T  ADVI++ VGGM+C GC ASVKRILESQP+
Sbjct: 65  GGGGGEESGAGAAAAASAAAAVVLGETETADADVILLRVGGMSCGGCAASVKRILESQPE 124

Query: 149 VSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQQAP 185
           V+ A+VD   +TA VW   EAK T +WR++LG  L+ HL+TCGF S +  ++ P
Sbjct: 125 VTSATVDFEKKTAAVWTTPEAKATKDWRKQLGEKLSHHLSTCGFQSHLLDEEEP 178

[Close]

BLAST of MELO3C018643 vs. TrEMBL
Match: A0A0D9Z8A0_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.4e-28
Identity = 75/168 (44.64%), Postives = 100/168 (59.52%), Query Frame = 1


Query: 29  STISTLSF-PLRAALPPI----HRRQKFVSVFASGN-----------GNGGVRGESGGGG 88
           + ++ LSF PL AA  P+     R + F S+ +S +           G GG RG  GGGG
Sbjct: 70  AAVTRLSFVPLAAAARPLLAGFMRPRVFASISSSSSPFSGGGGGRFFGGGGGRGRGGGGG 129

Query: 89  GGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCASVKRILESQPQVS 148
           GGG++ G   +   S   A    +  T  ADVI++ VGGM+C GC ASVKRILESQP+V+
Sbjct: 130 GGGEESGAGAAAAASAAAAVVLGETETADADVILLRVGGMSCGGCAASVKRILESQPEVT 189

Query: 149 HASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 181
            A+VD   +TA VW   EAK T +WR++LG  L+ HL+TCGF S + G
Sbjct: 190 SATVDFEKKTAAVWTTPEAKATKDWRKQLGEKLSHHLSTCGFQSHLLG 237

[Close]

BLAST of MELO3C018643 vs. TAIR10
Match: AT4G33520.2 (AT4G33520.2 P-type ATP-ase 1)

HSP 1 Score: 143.3 bits (360), Expect = 1.5e-34
Identity = 83/163 (50.92%), Postives = 100/163 (61.35%), Query Frame = 1


Query: 23  SSFTSISTISTLSFPLRAALPPIHRRQKFVSVFA---------SGNGNGGVRGESGGGGG 82
           S FTS +  S L     A LP I  R + +S  +          G+G GG  G SGGGGG
Sbjct: 65  SRFTSSN--SALRSLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGG 124

Query: 83  GGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCASVKRILESQPQVSH 142
           GG + G    D  SKL A  +D  +  S+D+I++ VGGMTC GC ASVK+ILESQPQV+ 
Sbjct: 125 GGSESG----DSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVAS 184

Query: 143 ASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS 177
           ASV+L +ETAIVWPV EAK  P+W++ LG  LA HLT CGF S
Sbjct: 185 ASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of MELO3C018643 vs. TAIR10
Match: AT5G21930.1 (AT5G21930.1 P-type ATPase of Arabidopsis 2)

HSP 1 Score: 51.2 bits (121), Expect = 7.8e-07
Identity = 30/73 (41.10%), Postives = 41/73 (56.16%), Query Frame = 1


Query: 105 IVIGVGGMTCKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVA 164
           I++ V GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T +  E    +
Sbjct: 78  ILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVTADTAE----S 137

Query: 165 LAKHLTTCGFSSK 178
           LAK LT  GF +K
Sbjct: 138 LAKRLTESGFEAK 146

[Close]

BLAST of MELO3C018643 vs. NCBI nr
Match: gi|659110400|ref|XP_008455207.1| (PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 360.5 bits (924), Expect = 1.7e-96
Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 1


Query: 1   MDSAISLMASNSFLSTLSTIPRSSFTSISTISTLSFPLRAALPPIHRRQKFVSVFASGNG 60
           MDSAISLMASNSFLSTLSTIPRSSFTSISTISTLSFPLRAALPPIHRRQKFVSVFASGNG
Sbjct: 1   MDSAISLMASNSFLSTLSTIPRSSFTSISTISTLSFPLRAALPPIHRRQKFVSVFASGNG 60

Query: 61  NGGVRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCAS 120
           NGGVRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCAS
Sbjct: 61  NGGVRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCAS 120

Query: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180
           VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG
Sbjct: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180

Query: 181 QQA 184
           Q A
Sbjct: 181 QGA 183

[Close]

BLAST of MELO3C018643 vs. NCBI nr
Match: gi|449438195|ref|XP_004136875.1| (PREDICTED: copper-transporting ATPase PAA1, chloroplastic [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 1.1e-87
Identity = 168/183 (91.80%), Postives = 173/183 (94.54%), Query Frame = 1


Query: 1   MDSAISLMASNSFLSTLSTIPRSSFTSISTISTLSFPLRAALPPIHRRQKFVSVFASGNG 60
           MDSAISLMASNSFLSTLS+      TS+STISTLSFP RAALPPIHRRQKF+S+FASGNG
Sbjct: 1   MDSAISLMASNSFLSTLSS------TSVSTISTLSFPRRAALPPIHRRQKFISIFASGNG 60

Query: 61  NGGVRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCAS 120
           NGGVRGESGGGGGGGDDGGP GSDVDSKLLAGEADDDATLSADVIV+GV GMTCKGCCAS
Sbjct: 61  NGGVRGESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCAS 120

Query: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180
           VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG
Sbjct: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 177

Query: 181 QQA 184
           Q A
Sbjct: 181 QGA 177

[Close]

BLAST of MELO3C018643 vs. NCBI nr
Match: gi|645263746|ref|XP_008237377.1| (PREDICTED: copper-transporting ATPase PAA1, chloroplastic [Prunus mume])

HSP 1 Score: 170.6 bits (431), Expect = 2.5e-39
Identity = 81/125 (64.80%), Postives = 98/125 (78.40%), Query Frame = 1


Query: 55  FASGNGNGGVRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTC 114
           FASG GNGG  GESGG GG GD GG  G D  SK++A   D+ + +S DV+V+ VGGMTC
Sbjct: 90  FASGGGNGGFGGESGGSGGDGD-GGAGGGDAKSKVVAAGCDEISAVSTDVVVLDVGGMTC 149

Query: 115 KGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGF 174
            GC ASVKRILESQPQVS ASV+L +ETA+VWPV+EAK+TPNW+++LG  LAKHLT CGF
Sbjct: 150 GGCAASVKRILESQPQVSSASVNLTTETAVVWPVSEAKVTPNWQKQLGETLAKHLTNCGF 209

Query: 175 SSKVQ 180
            S ++
Sbjct: 210 KSNLR 213

[Close]

BLAST of MELO3C018643 vs. NCBI nr
Match: gi|703090730|ref|XP_010094160.1| (Putative copper-transporting ATPase PAA1 [Morus notabilis])

HSP 1 Score: 170.6 bits (431), Expect = 2.5e-39
Identity = 95/176 (53.98%), Postives = 118/176 (67.05%), Query Frame = 1


Query: 7   LMASNSFLSTLSTIPRSSFTSISTISTLS---FPLRAALPPIHRRQKFVSVFASGNGNGG 66
           L  S +F S  S  P S+ +S+S  S  +    PLR     I R   F + F+SG G+GG
Sbjct: 62  LQRSPTFGSAASFSPPSAASSLSLRSLCAAAELPLRRR---IGRASGFAASFSSGGGSGG 121

Query: 67  VRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCASVKR 126
             GESGGGGG G  G  +G D  SK+ A  A+D +    DVI++ VGGMTC GC ASVKR
Sbjct: 122 FGGESGGGGGDGGSGS-DGGDAKSKIPATGAEDVSANPTDVIILDVGGMTCGGCAASVKR 181

Query: 127 ILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ 180
           ILESQPQVS ASV+L +ETAIVWPVAEAK+ P+W+++LG ALAKHLT CGF S ++
Sbjct: 182 ILESQPQVSSASVNLTTETAIVWPVAEAKVVPDWQQQLGEALAKHLTNCGFKSNLR 233

[Close]

BLAST of MELO3C018643 vs. NCBI nr
Match: gi|470108222|ref|XP_004290425.1| (PREDICTED: copper-transporting ATPase PAA1, chloroplastic [Fragaria vesca subsp. vesca])

HSP 1 Score: 170.6 bits (431), Expect = 2.5e-39
Identity = 88/152 (57.89%), Postives = 107/152 (70.39%), Query Frame = 1


Query: 32  STLSFPLRAALPPIHRRQKFVSV----FASGNGNGGVRGESGGGGGGGDDGGPNGSDVDS 91
           STL   L    PP  RR   V+     FASG GNGG  GESGG GG G  GG +G D  S
Sbjct: 63  STLRRSLCLVDPPTRRRLHCVATNQASFASGGGNGGFGGESGGSGGDGG-GGSDGGDAKS 122

Query: 92  KLLAGEADDDATLSADVIVIGVGGMTCKGCCASVKRILESQPQVSHASVDLASETAIVWP 151
            ++A   D+ + +S DVI++ VGGMTC GC ASVKRILESQPQVS ASV+L +E AIVWP
Sbjct: 123 NVVASGCDEASAISTDVIMLDVGGMTCGGCAASVKRILESQPQVSSASVNLTTEVAIVWP 182

Query: 152 VAEAKITPNWREELGVALAKHLTTCGFSSKVQ 180
           V+EAK+TPNW+++LG  LAKHLT CGF+S ++
Sbjct: 183 VSEAKLTPNWQQQLGETLAKHLTNCGFNSNIR 213

The following BLAST results are available for this feature:

BLAST of MELO3C018643 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HMA6_ARATH	2.7e-33	50.92	Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 P...	[more]

BLAST of MELO3C018643 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5Z3_CUCSA	7.8e-88	91.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G062830 PE=4 SV=1	[more]
M0U5M3_MUSAM	1.2e-32	59.35	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
A0A0D9Z8A1_9ORYZ	6.3e-29	43.60	Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1	[more]
B8AQL4_ORYSI	1.1e-28	43.10	Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11856 PE=4...	[more]
A0A0D9Z8A0_9ORYZ	1.4e-28	44.64	Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1	[more]

BLAST of MELO3C018643 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33520.2	1.5e-34	50.92	P-type ATP-ase 1	[more]
AT5G21930.1	7.8e-07	41.10	P-type ATPase of Arabidopsis 2	[more]

BLAST of MELO3C018643 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110400\|ref\|XP_008455207.1\|	1.7e-96	99.45	PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cucumis melo]	[more]
gi\|449438195\|ref\|XP_004136875.1\|	1.1e-87	91.80	PREDICTED: copper-transporting ATPase PAA1, chloroplastic [Cucumis sativus]	[more]
gi\|645263746\|ref\|XP_008237377.1\|	2.5e-39	64.80	PREDICTED: copper-transporting ATPase PAA1, chloroplastic [Prunus mume]	[more]
gi\|703090730\|ref\|XP_010094160.1\|	2.5e-39	53.98	Putative copper-transporting ATPase PAA1 [Morus notabilis]	[more]
gi\|470108222\|ref\|XP_004290425.1\|	2.5e-39	57.89	PREDICTED: copper-transporting ATPase PAA1, chloroplastic [Fragaria vesca subsp....	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006121	HMA_dom
IPR017969	Heavy-metal-associated_CS
IPR006121	HMA_dom
IPR017969	Heavy-metal-associated_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport
GO:0030001	metal ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060003	copper ion export
biological_process	GO:0098655	cation transmembrane transport
biological_process	GO:0030422	production of siRNA involved in RNA interference
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0008152	metabolic process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0030001	metal ion transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005887	integral component of plasma membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016607	nuclear speck
cellular_component	GO:0016020	membrane
cellular_component	GO:0005829	cytosol
molecular_function	GO:0004008	copper-exporting ATPase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0019829	cation-transporting ATPase activity
molecular_function	GO:0043167	ion binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU49883	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C018643T1	MELO3C018643T1	mRNA
MELO3C018643T2	MELO3C018643T2	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU49883	MU49883	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 109..153 score: 1.
IPR006121	Heavy metal-associated domain, HMA	PROFILE	PS50846	HMA_2	coord: 104..178 score: 12
IPR006121	Heavy metal-associated domain, HMA	unknown	SSF55008	HMA, heavy metal-associated domain	coord: 105..146 score: 1.57
IPR017969	Heavy-metal-associated, conserved site	PROSITE	PS01047	HMA_1	coord: 109..138 scor
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 105..177 score: 3.5
None	No IPR available	PANTHER	PTHR24093	FAMILY NOT NAMED	coord: 96..176 score: 6.6
None	No IPR available	PANTHER	PTHR24093:SF357	SUBFAMILY NOT NAMED	coord: 96..176 score: 6.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C018643	Csa7G062830	Cucumber (Chinese Long) v2	cumeB530
MELO3C018643	Cla012847	Watermelon (97103) v1	mewmB207
MELO3C018643	ClCG09G015420	Watermelon (Charleston Gray)	mewcgB176
MELO3C018643	Cla97C09G177410	Watermelon (97103) v2	mewmbB224
MELO3C018643	Bhi05G000701	Wax gourd	mewgoB220
MELO3C018643	CSPI07G05540	Wild cucumber (PI 183967)	cpimeB538
MELO3C018643	Cucsa.217930	Cucumber (Gy14) v1	cgymeB379
MELO3C018643	CmaCh11G016490	Cucurbita maxima (Rimu)	cmameB098
MELO3C018643	CmaCh19G002550	Cucurbita maxima (Rimu)	cmameB455
MELO3C018643	CmoCh19G002750	Cucurbita moschata (Rifu)	cmomeB446
MELO3C018643	CmoCh11G014850	Cucurbita moschata (Rifu)	cmomeB085
MELO3C018643	Lsi03G007630	Bottle gourd (USVL1VR-Ls)	lsimeB247
MELO3C018643	Cp4.1LG15g02300	Cucurbita pepo (Zucchini)	cpemeB217
MELO3C018643	Cp4.1LG04g07080	Cucurbita pepo (Zucchini)	cpemeB604
MELO3C018643	CsGy7G005160	Cucumber (Gy14) v2	cgybmeB468
MELO3C018643	Carg24508	Silver-seed gourd	carmeB0948
MELO3C018643	Carg26456	Silver-seed gourd	carmeB0375
MELO3C018643	CsaV3_7G006490	Cucumber (Chinese Long) v3	cucmeB548

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None