CsaV3_7G006490 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G006490
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	copper-transporting ATPase PAA1, chloroplastic-like
Location	chr7 : 4018440 .. 4021813 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATCTATGTGATTGCATCGAAAATTAGGTATTACCATTATGATATGAGTTTGAGTTTATGATTACAATTTTATAGATAAAAAAAAAAAACATTATTTTAACATGGTTTTCAATACTCAAACCATAACGAATAACTCTAAAATTGACAAAATTCAGTAAACGCAATCAAACACAATTCAATTACGTTTGCGATTACGATTTATGTATCGATCAAATTTAATTAGGATTTTAGTAACAATAACAAAATGATACATATGTGTGTGTTAAGTAACAATAATAACACAATAATAAGTGAACACATTTTTTTGAAGAAGAGTGGGGGAAAAACCAACGGACACAAAAGCGCCCATCAGTCGAGTGGTTGACCATTTTTCTCCCTCCCTCAGTTACCCGGAGAGATTCATTTCTTCAATGGATTCCGCCATATCTCTAATGGCCTCCAATTCCTTTCTCTCCACTCTCTCCTCCACCTCTGTTTCCACTATCTCCACACTTTCTTTCCCGCGTCGAGCTGCTCTTCCTCCCATACACCGTCGTCAGAAATTCATCTCCATTTTTGCGTCAGGTAATGGCAATGGCGGCGTTCGAGGAGAGAGCGGCGGTGGAGGTGGCGGCGGCGATGATGGTGGACCCAAAGGCAGCGATGTCGACTCGAAATTGCTTGCTGGAGAAGCTGACGACGATGCCACGCTGTCTGCGGACGTCATTGTTCTCGGTGTTGAAGTACGAGACGAGTTCTTTATGTTTTCAGTTTTCGATTGGTGCTAATTTTGATGGGTTTTGTTCTATTTGGTATAGGGGATGACGTGCAAGGGGTGTTGTGCGAGTGTCAAGAGGATTCTTGAAAGTCAGGTGGTTATATACACTTTTGCTTTCTTCTTGTCTGTTTTACTTGTCATTATCTAAGGAAGATAGATGAGCTATTTGACGATTGGTTTTGAGAAGAATCCATGTTATCCAATAGTATCAAAACCCATAAAGCCCAGATGGACCCAAATGCACCTTATGTTGAGATTCCACATTAGACGAATCAAAAAACCTCACAATGTAAATAGATGGCTACTCCTACCATTGGTACTTGGTTTTGAGAAGAACCCATATTATCTAATCGACTAATCCCTATTTTTTGGTTGCTGGTTGAATTTACAATGTAGAAACTGCATAGTGTAGGACTTGATTGATTTTTCTTATCCTAAAAACAATCTCTTCTTGTTTTATTGATATCTAATTATCTAATTGCATTTTCAGTATTGAAATGACTTGTTTTACATTTCTAGCTCTCCTCTACTGGTGTTAAAGAATATATATATATGGAAGATTAAATTTATCATAATCAACCAGCTTAGATTTTTTATTTGACCACGGTTTAATATGGTATTAAAGCTGGACTTGCGGCTTGATAGTTCCATTTTCTTTTCAATTAGTATTGGTTTCAAACTGACAGTAAGACTACAAACTTTCTCTGCCCTCCAAGTAATTCTTCATTGTTATTCTTTTTGTATTATGAACAGCCACAAGTGTCACATGCTAGTGTTGACCTTGCTTCTGAGACAGCAATCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTAGGAGTGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCGAAGGTTCAAGGTCAGCAAGCATCATAAATTCATAACTCATAAGTCACAGCTCATAATCATATCTCATTTATTGCGCTAGCTTCCCCTTTCTTCTTTTGTTGTTGCTGTCAAGATTGCCACTTTCAAATCTTAAGATTTCTTCTTTGCTGTTTGGTTGGGCATCACAACCACCATGCTCACTGACGCTTGAGCTTTTAAGCTAAGATATATGGTTTTCTTATGGTGCTTTTATGTAGTATTATATTTAAAGCTTCCGAAAATCTAGAATCTTTTATGAATCCTATTGTCATCTAACAGCTATAGTTGCTAGAATTCACTTGTTTTGTATTTCTGTTCACCATTCACTGAGAGGTTTTTGACAGATTCCTCCACATTCAATAATGGGATTCTGGGTTCTGAAATTTAGAATTTTGAGTATTTCATATTAGGATTCACCATGTATGATTGAGTGACGGATTTTGCTTCACCAGTTTGAAACGAAGTAGTCTGAAGTCTCCTCCTCTTGTGCTCGTGAAATTTTCTTACACACTTTTTGGGGCCTGATTGTTTTCCATTCTACAATTCTGGTTCTACTTTATTCATGCATAGTTCAAGAATTCAGTTGAAGCTTCCTTGAACTACACAATTTTGCGGCAGCTGAATTGCATAAATTAATTTCACCGATGTCTTATTGGTTAGTGCATTCTCATTCTTGCATGCATTCCAATTCAACTAATGCACAGGAATATCAAAGGGCGATTTCTTTAACTAGCATGTTGTATTTCTAGTGGTTTTGTGTGTGTTTGATCAACTCTTGTTATTACTATAATAAATGATGCTGAGTTTGATGAGACTTGCCAGCTAAGAATTTCTTTCTGTCTTCTGTATATCCAGGGACTTTTGGACTTCCAATTTATTTTTTTCATCTTCTTTCCTCATCCTTAGAAATTGGCTACGAAAGATTAAACCATAAAATCTTGTCACGGATGGTATACAAAGCAAATCAACATCTAGTACTGATAACAAAAACGGCTTAAGAAAATGAAAAGTTACTGTTTTTTTCACATTACATAAATCTACTTATGATAAGTTCGTAATCTCAACTTTTTCTTTATCTCGAAGTTCATGATTCAAACATTGTGAGACTTACAATACAATTAACAGTTCACATGTATTATTCAGAATTTCTGTTATTCTCATAACTTATGTGAACAATGTGGTTCTCTACAGGACAAGGTGCTATAGGAGGCGACGTTTCACTATAGTAATGCAAAAGTTCGATGGGGCAAGTGAATTTTATGGTGCTAATGTTATGACACGACATGAATTTCAAGTAGTTCTATCTGCTAACTTGAATTGAACTCAACAATAAGTGCAGAAGCCAAAGAACAGGACTCAATTTGTAGCATATCAATATGTATCAATAAAGTGATTAATTTCAGCAATGGACGGAGTAAAGATTGTTTGGAGACCCTTGATACTGGAAATCTTTTGTTGCATACTGTGAGAAGAGTGACATGTTTCAAGTAGAGTATGAATACGATTGTAGTCTTGGAAGTTGATTACAAACTACAGTTATGGTTTTTTTATGTGCAAATGATATATTATCAGCTGCTGTTAAGAATGTTAGCATTTGAAAAGTTATCTTTTTCTAGAACAGCTTCTCTAGAAACTCTCCCACACTGCTCCCCTCCCACCATTCCCAAACACTAAACATGGATAACAACACATGATCGGGGC

mRNA sequence

ATGGATTCCGCCATATCTCTAATGGCCTCCAATTCCTTTCTCTCCACTCTCTCCTCCACCTCTGTTTCCACTATCTCCACACTTTCTTTCCCGCGTCGAGCTGCTCTTCCTCCCATACACCGTCGTCAGAAATTCATCTCCATTTTTGCGTCAGGTAATGGCAATGGCGGCGTTCGAGGAGAGAGCGGCGGTGGAGGTGGCGGCGGCGATGATGGTGGACCCAAAGGCAGCGATGTCGACTCGAAATTGCTTGCTGGAGAAGCTGACGACGATGCCACGCTGTCTGCGGACGTCATTGTTCTCGGTGTTGAAGGGATGACGTGCAAGGGGTGTTGTGCGAGTGTCAAGAGGATTCTTGAAAGTCAGCCACAAGTGTCACATGCTAGTGTTGACCTTGCTTCTGAGACAGCAATCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTAGGAGTGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCGAAGGTTCAAGGACAAGGTGCTATAGGAGGCGACGTTTCACTATAG

Coding sequence (CDS)

ATGGATTCCGCCATATCTCTAATGGCCTCCAATTCCTTTCTCTCCACTCTCTCCTCCACCTCTGTTTCCACTATCTCCACACTTTCTTTCCCGCGTCGAGCTGCTCTTCCTCCCATACACCGTCGTCAGAAATTCATCTCCATTTTTGCGTCAGGTAATGGCAATGGCGGCGTTCGAGGAGAGAGCGGCGGTGGAGGTGGCGGCGGCGATGATGGTGGACCCAAAGGCAGCGATGTCGACTCGAAATTGCTTGCTGGAGAAGCTGACGACGATGCCACGCTGTCTGCGGACGTCATTGTTCTCGGTGTTGAAGGGATGACGTGCAAGGGGTGTTGTGCGAGTGTCAAGAGGATTCTTGAAAGTCAGCCACAAGTGTCACATGCTAGTGTTGACCTTGCTTCTGAGACAGCAATCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTAGGAGTGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCGAAGGTTCAAGGACAAGGTGCTATAGGAGGCGACGTTTCACTATAG

Protein sequence

MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGGVRGESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGGDVSL

Homology

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BLAST of CsaV3_7G006490 vs. NCBI nr
Match: XP_004136875.1 (PREDICTED: copper-transporting ATPase PAA1, chloroplastic [Cucumis sativus] >KGN43717.1 hypothetical protein Csa_7G062830 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 8.0e-82
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGGVXX 60
           MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGGVXX
Sbjct: 1   MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGGVXX 60

Query: 61  XXXXXXXXXXXXXXXGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILE 120
           XXXXXXXXXXXXXXXGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILE
Sbjct: 61  XXXXXXXXXXXXXXXGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILE 120

Query: 121 SQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGG 180
           SQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGG
Sbjct: 121 SQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGG 180

Query: 181 DVSL 185
           DVSL
Sbjct: 181 DVSL 184

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BLAST of CsaV3_7G006490 vs. NCBI nr
Match: XP_008455207.1 (PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 273.9 bits (699), Expect = 4.1e-70
Identity = 166/190 (87.37%), Postives = 171/190 (90.00%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLSS------TSVSTISTLSFPRRAALPPIHRRQKFISIFASGNG 60
           MDSAISLMASNSFLSTLS+               SFP RAALPPIHRRQKF+S+FASGNG
Sbjct: 1   MDSAISLMASNSFLSTLSTIPRXXXXXXXXXXXXSFPLRAALPPIHRRQKFVSVFASGNG 60

Query: 61  NGGVXXXXXXXXXXXXXXXXXGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCAS 120
           NGGVXXXXXXXXXXXXXXXXX  DVDSKLLAGEADDDATLSADVIV+GV GMTCKGCCAS
Sbjct: 61  NGGVXXXXXXXXXXXXXXXXXXXDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCAS 120

Query: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180
           VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG
Sbjct: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180

Query: 181 QGAIGGDVSL 185
           QGAIGGDV+L
Sbjct: 181 QGAIGGDVTL 190

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BLAST of CsaV3_7G006490 vs. NCBI nr
Match: XP_023553917.1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553918.1 copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553920.1 copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 225.3 bits (573), Expect = 1.7e-55
Identity = 148/194 (76.29%), Postives = 157/194 (80.93%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLS----------STSVSTISTLSFPRRAALPPIHRRQKFISIFA 60
           MDSA+SLMASN+ LST++          STS+S ISTLSF  RAA+PP+HRR KFIS   
Sbjct: 1   MDSALSLMASNAPLSTITRSFSTLYFTHSTSISPISTLSFSLRAAVPPLHRRHKFIS-XX 60

Query: 61  SGNGNGGVXXXXXXXXXXXXXXXXXGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKG 120
                   XXXXXXXXXXXXXXXXX   V S LLAGEA+DDATLSAD IVLGV GM CKG
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSNLLAGEAEDDATLSADAIVLGVGGMRCKG 120

Query: 121 CCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS 180
           C ASVKRILESQPQVSHASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCGFSS
Sbjct: 121 CSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCGFSS 180

Query: 181 KVQGQGAIGGDVSL 185
           KVQGQGAIGGDVSL
Sbjct: 181 KVQGQGAIGGDVSL 193

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BLAST of CsaV3_7G006490 vs. NCBI nr
Match: XP_022142006.1 (copper-transporting ATPase PAA1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 224.9 bits (572), Expect = 2.2e-55
Identity = 144/197 (73.10%), Postives = 157/197 (79.70%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLS----------STSVSTISTL---SFPRRAALPPIHRRQKFIS 60
           MDSAISL+ASN  LS+L+           T +S IS +   + P RAA+PP+HRR KF+S
Sbjct: 1   MDSAISLIASNLPLSSLNFRFSGPNFTHFTCISPISAIHSPTVPLRAAVPPLHRRFKFVS 60

Query: 61  IFASGNGNGGVXXXXXXXXXXXXXXXXXGSDVDSKLLAGEADDDATLSADVIVLGVEGMT 120
            FASGNGNGGV     XXXXXXXXXXXX    +SKLLA EA+ DATLSADVIVL V GMT
Sbjct: 61  KFASGNGNGGV---RDXXXXXXXXXXXXXXXAESKLLAEEAEGDATLSADVIVLDVGGMT 120

Query: 121 CKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCG 180
           C GC ASVKRILESQPQVS ASVDLASETA+VWPVAEAKITPNWREELG ALAKHLTTCG
Sbjct: 121 CMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCG 180

Query: 181 FSSKVQGQGAIGGDVSL 185
           FSSKVQGQGA+GGDVSL
Sbjct: 181 FSSKVQGQGAVGGDVSL 194

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BLAST of CsaV3_7G006490 vs. NCBI nr
Match: XP_022963522.1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 218.4 bits (555), Expect = 2.0e-53
Identity = 146/197 (74.11%), Postives = 155/197 (78.68%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLS-------------STSVSTISTLSFPRRAALPPIHRRQKFIS 60
           MDSA+S+MASN+ L TLS             S S+S ISTLSF  RAA+PP+HRR KFIS
Sbjct: 1   MDSALSVMASNAPLFTLSTITRSFSTLNFTHSLSISPISTLSFSLRAAVPPLHRRHKFIS 60

Query: 61  IFASGNGNGGVXXXXXXXXXXXXXXXXXGSDVDSKLLAGEADDDATLSADVIVLGVEGMT 120
             +S       XXXXXXXXXXXXXXXXX       LLAGEA+DDA LSAD IVLGV GMT
Sbjct: 61  -NSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLAGEAEDDAALSADAIVLGVGGMT 120

Query: 121 CKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCG 180
           CKGC ASVKRILESQPQVSHASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

Query: 181 FSSKVQGQGAIGGDVSL 185
           FSSKVQGQGAIGGDVSL
Sbjct: 181 FSSKVQGQGAIGGDVSL 196

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BLAST of CsaV3_7G006490 vs. TAIR10
Match: AT4G33520.2 (P-type ATP-ase 1)

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-25
Identity = 56/90 (62.22%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 81  SKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQVSHASVDLASETAIVW 140
           SKL A  +D  +  S+D+I+L V GMTC GC ASVK+ILESQPQV+ ASV+L +ETAIVW
Sbjct: 132 SKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVW 191

Query: 141 PVAEAKITPNWREELGVALAKHLTTCGFSS 171
           PV EAK  P+W++ LG  LA HLT CGF S
Sbjct: 192 PVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

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BLAST of CsaV3_7G006490 vs. TAIR10
Match: AT5G21930.1 (P-type ATPase of Arabidopsis 2)

HSP 1 Score: 53.1 bits (126), Expect = 2.1e-07
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 99  IVLGVEGMTCKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVA 158
           I+L V GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T +  E    +
Sbjct: 78  ILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVTADTAE----S 137

Query: 159 LAKHLTTCGFSSK--VQGQG 177
           LAK LT  GF +K  V G G
Sbjct: 138 LAKRLTESGFEAKRRVSGMG 153

[Close]

BLAST of CsaV3_7G006490 vs. Swiss-Prot
Match: sp|Q9SZC9|HMA6_ARATH (Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAA1 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.3e-24
Identity = 56/90 (62.22%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 81  SKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQVSHASVDLASETAIVW 140
           SKL A  +D  +  S+D+I+L V GMTC GC ASVK+ILESQPQV+ ASV+L +ETAIVW
Sbjct: 132 SKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVW 191

Query: 141 PVAEAKITPNWREELGVALAKHLTTCGFSS 171
           PV EAK  P+W++ LG  LA HLT CGF S
Sbjct: 192 PVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of CsaV3_7G006490 vs. Swiss-Prot
Match: sp|B9DFX7|HMA8_ARATH (Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAA2 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.7e-06
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 99  IVLGVEGMTCKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVA 158
           I+L V GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T +  E    +
Sbjct: 78  ILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVTADTAE----S 137

Query: 159 LAKHLTTCGFSSK--VQGQG 177
           LAK LT  GF +K  V G G
Sbjct: 138 LAKRLTESGFEAKRRVSGMG 153

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BLAST of CsaV3_7G006490 vs. TrEMBL
Match: tr|A0A0A0K5Z3|A0A0A0K5Z3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062830 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 5.3e-82
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGGVXX 60
           MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGGVXX
Sbjct: 1   MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGGVXX 60

Query: 61  XXXXXXXXXXXXXXXGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILE 120
           XXXXXXXXXXXXXXXGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILE
Sbjct: 61  XXXXXXXXXXXXXXXGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILE 120

Query: 121 SQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGG 180
           SQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGG
Sbjct: 121 SQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGG 180

Query: 181 DVSL 185
           DVSL
Sbjct: 181 DVSL 184

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BLAST of CsaV3_7G006490 vs. TrEMBL
Match: tr|A0A1S3BZZ1|A0A1S3BZZ1_CUCME (copper-transporting ATPase PAA1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103495426 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.7e-70
Identity = 166/190 (87.37%), Postives = 171/190 (90.00%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLSS------TSVSTISTLSFPRRAALPPIHRRQKFISIFASGNG 60
           MDSAISLMASNSFLSTLS+               SFP RAALPPIHRRQKF+S+FASGNG
Sbjct: 1   MDSAISLMASNSFLSTLSTIPRXXXXXXXXXXXXSFPLRAALPPIHRRQKFVSVFASGNG 60

Query: 61  NGGVXXXXXXXXXXXXXXXXXGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCAS 120
           NGGVXXXXXXXXXXXXXXXXX  DVDSKLLAGEADDDATLSADVIV+GV GMTCKGCCAS
Sbjct: 61  NGGVXXXXXXXXXXXXXXXXXXXDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCAS 120

Query: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180
           VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG
Sbjct: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180

Query: 181 QGAIGGDVSL 185
           QGAIGGDV+L
Sbjct: 181 QGAIGGDVTL 190

[Close]

BLAST of CsaV3_7G006490 vs. TrEMBL
Match: tr|A0A1U8ANW6|A0A1U8ANW6_NELNU (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Nelumbo nucifera OX=4432 GN=LOC104605979 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.2e-31
Identity = 71/106 (66.98%), Postives = 87/106 (82.08%), Query Frame = 0


Query: 78  DVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQVSHASVDLASETA 137
           +  SK + G++++ +TLS+DVI+L V GMTC GC ASVKRILESQPQVS ASV+LASETA
Sbjct: 124 ETKSKSIGGDSEEVSTLSSDVIILHVGGMTCGGCAASVKRILESQPQVSSASVNLASETA 183

Query: 138 IVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGGDVS 184
           IVWPVAE K+T NW+++LG  LAKHLT CGF S + GQGAI GD+S
Sbjct: 184 IVWPVAEVKVTENWQQQLGETLAKHLTNCGFKSDLHGQGAI-GDIS 228

[Close]

BLAST of CsaV3_7G006490 vs. TrEMBL
Match: tr|A0A2P4L396|A0A2P4L396_QUESU (Isoform 2 of copper-transporting atpase paa1, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_46419 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.5e-31
Identity = 69/103 (66.99%), Postives = 86/103 (83.50%), Query Frame = 0


Query: 81  SKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQVSHASVDLASETAIVW 140
           + L+A  A + + L +DVIVL V GMTC GC ASVKRILESQPQVS ASV+L +ETA+VW
Sbjct: 119 ANLVASGAQEVSALPSDVIVLDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAVVW 178

Query: 141 PVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGGDVS 184
           PV+EAK+T NW+++LG ALAKHLTTCGF+S ++GQGAI GD+S
Sbjct: 179 PVSEAKVTANWQQQLGEALAKHLTTCGFNSNLRGQGAIEGDIS 221

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BLAST of CsaV3_7G006490 vs. TrEMBL
Match: tr|A0A1S3XF08|A0A1S3XF08_TOBAC (copper-transporting ATPase PAA1, chloroplastic-like OS=Nicotiana tabacum OX=4097 GN=LOC107764306 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 6.1e-30
Identity = 65/100 (65.00%), Postives = 86/100 (86.00%), Query Frame = 0


Query: 83  LLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQVSHASVDLASETAIVWPV 142
           ++A  ++D + LS+DVI+L V GMTC GC ASVKRILESQPQVS A+V+L +ETAIVWPV
Sbjct: 133 VVAETSEDVSALSSDVIILDVTGMTCGGCAASVKRILESQPQVSSATVNLTTETAIVWPV 192

Query: 143 AEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGGDV 183
           ++AK+ PNW++++G ALAKHLTTCGF+S V+G+GAI GD+
Sbjct: 193 SDAKVVPNWQKQIGEALAKHLTTCGFTSNVRGEGAIEGDL 232

The following BLAST results are available for this feature:

BLAST of CsaV3_7G006490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136875.1	8.0e-82	100.00	PREDICTED: copper-transporting ATPase PAA1, chloroplastic [Cucumis sativus] >KGN...	[more]
XP_008455207.1	4.1e-70	87.37	PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cucumis melo]	[more]
XP_023553917.1	1.7e-55	76.29	copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo s...	[more]
XP_022142006.1	2.2e-55	73.10	copper-transporting ATPase PAA1, chloroplastic-like [Momordica charantia]	[more]
XP_022963522.1	2.0e-53	74.11	copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita moscha...	[more]

BLAST of CsaV3_7G006490 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33520.2	1.3e-25	62.22	P-type ATP-ase 1	[more]
AT5G21930.1	2.1e-07	42.50	P-type ATPase of Arabidopsis 2	[more]

BLAST of CsaV3_7G006490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SZC9\|HMA6_ARATH	2.3e-24	62.22	Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|B9DFX7\|HMA8_ARATH	3.7e-06	42.50	Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CsaV3_7G006490 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K5Z3\|A0A0A0K5Z3_CUCSA	5.3e-82	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062830 PE=4 SV=1	[more]
tr\|A0A1S3BZZ1\|A0A1S3BZZ1_CUCME	2.7e-70	87.37	copper-transporting ATPase PAA1, chloroplastic-like OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A1U8ANW6\|A0A1U8ANW6_NELNU	4.2e-31	66.98	copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Nelumbo nucife...	[more]
tr\|A0A2P4L396\|A0A2P4L396_QUESU	5.5e-31	66.99	Isoform 2 of copper-transporting atpase paa1, chloroplastic OS=Quercus suber OX=...	[more]
tr\|A0A1S3XF08\|A0A1S3XF08_TOBAC	6.1e-30	65.00	copper-transporting ATPase PAA1, chloroplastic-like OS=Nicotiana tabacum OX=4097...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **INTERPRO**
Term	Definition
IPR036163	HMA_dom_sf
IPR017969	Heavy-metal-associated_CS
IPR006121	HMA_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
biological_process	GO:0060003	copper ion export
biological_process	GO:0008152	metabolic process
biological_process	GO:0098655	cation transmembrane transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004008	copper-exporting ATPase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0019829	cation-transporting ATPase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G006490.1	CsaV3_7G006490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 103..148 e-value: 3.1E-8 score: 33.9
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 98..172 score: 13.525
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 103..144 e-value: 4.88242E-10 score: 51.4525
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 97..175 e-value: 9.8E-15 score: 56.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..82
None	No IPR available	PANTHER	PTHR43520	FAMILY NOT NAMED	coord: 88..176
None	No IPR available	PANTHER	PTHR43520:SF10	SUBFAMILY NOT NAMED	coord: 88..176
IPR017969	Heavy-metal-associated, conserved site	PROSITE	PS01047	HMA_1	coord: 103..132
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	SSF55008	HMA, heavy metal-associated domain	coord: 99..140

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G006490	CSPI07G05540	Wild cucumber (PI 183967)	cpicucB415
CsaV3_7G006490	Cucsa.217930	Cucumber (Gy14) v1	cgycucB342
CsaV3_7G006490	CmaCh19G002550	Cucurbita maxima (Rimu)	cmacucB0642
CsaV3_7G006490	Cp4.1LG04g07080	Cucurbita pepo (Zucchini)	cpecucB0868
CsaV3_7G006490	Cp4.1LG15g02300	Cucurbita pepo (Zucchini)	cpecucB0326
CsaV3_7G006490	CsGy7G005160	Cucumber (Gy14) v2	cgybcucB348
CsaV3_7G006490	Carg26456	Silver-seed gourd	carcucB0402
CsaV3_7G006490	Carg24508	Silver-seed gourd	carcucB1013
CsaV3_7G006490	Cla012847	Watermelon (97103) v1	cucwmB580
CsaV3_7G006490	MELO3C018643	Melon (DHL92) v3.5.1	cucmeB548
CsaV3_7G006490	ClCG09G015420	Watermelon (Charleston Gray)	cucwcgB535
CsaV3_7G006490	Lsi03G007630	Bottle gourd (USVL1VR-Ls)	cuclsiB555
CsaV3_7G006490	MELO3C018643.2	Melon (DHL92) v3.6.1	cucmedB536
CsaV3_7G006490	Cla97C09G177410	Watermelon (97103) v2	cucwmbB581
CsaV3_7G006490	Bhi05G000701	Wax gourd	cucwgoB686

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G006490	Cucurbita maxima (Rimu)	cmacucB0171
CsaV3_7G006490	Cucurbita moschata (Rifu)	cmocucB0160
CsaV3_7G006490	Cucurbita moschata (Rifu)	cmocucB0627