CSPI07G05540 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G05540
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Cation-transporting P-type ATPase
Location	Chr7 : 4129545 .. 4132562 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCGCCATATCTCTAATGGCCTCCAATTCCTTTCTCTCCACTCTCTCCTCCACCTCTGTTTCCACTATCTCCACACTTTCTTTCCCGCGTCGAGCTGCTCTTCCTCCCATACACCGTCGTCAGAAATTCATCTCCATTTTTGCGTCAGGTAATGGCAATGGCGGCGTTCGAGGAGAGAGCGGCGGGGGGGGGGGGGGCGGGGGGGGAGGGGGGGCGGTGGTGGTGATAGTGATGGGGTGATGGTGGCACTGACGGTGGTTGAGTAGGGAGGAGGGGAGGTGGCAGAAGATGACGGGGTGGTGTGTCCAACCTACTAGAGGAAAAGAGGGAAAGGGAGAGGTGGAGGTGGCGGCGGCGATGATGGTGGACCCAAAGGCAGCGATGTCGACTCGAAATTGCTTGCTGGAGAAGCTGACGACGATGCCACGCTGTCTGCGGACGTCATTGTTCTCGGTGTTGAAGTACGAGACGAGTTCTTTATGTTTTCAGTTTTCGATTGGTGCTAATTTTGATGGGTTTTGTTCTATTTGGTATAGGGGATGACGTGCAAGGGGTGTTGTGCGAGTGTCAAGAGGATTCTTGAAAGTCAGGTGGTTATATACACTTTTGCTTTCTTCTTGTCTGTTTTACTTGTCATTATCTAAGGAAGATAGATGAGCTATTTGACGATTGGTTTTGAGAAGAATCCATATTATCCAATAGTATCAAAACCCATAAAGCCCAGATGGACCCAAATGCACCTTATGTTGAGATTCCACATTAGACGAATAAAAAAACCTCACAATGTAAATAGATGGCTACTCCTACCATTGGTACTTGGTTTTGAGAAGAACCCATATTATCTAATCGACTAATCCCTATTTTTTGGTTGCTGGTTGAATTTACAATGTAGAAACTGCATAGTGTAGGACTTGATTGATTTTTCTTATCCTAAAAACAATCTCTTGTTGTTTTATTGATATCTAATTATCTAATTGCATTTTCAGTATTGAAATGACTTGTTTTACATTTCTAGCTCTCCTCTACTGGTGTTAAAGAATATATATATATGGAAGATTAAATTTATCATAATCAACCAGCTTAGATTTTTTATTTGACCACGGTTTAATATGCTATTAAAGCTGGACTTGCGGCTTGATAGTTCCATTTTCTTTTCAATTAGTATTGATGTCAAACTGACAGTAAGACTACAAACTTTCTCTGCCCTCCAAGTAATTCTTCATTGTTATTCTTTTTGTATTATGGACAGCCACAAGTGTCACATGCTAGTGTTGACCTTGCTTCTGAGACAGCAATCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTAGGAGTGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCGAAGGTTCAAGGTCAGCAAGCATCATAAATTCATAACTCATAAGTCACAGCTCATAATCATATCTCATTTATTGCGCTAGCTTCCCCTTTCTTCTTTTGTTGTTGCTGTCAAGATTGCCACTTTCAAATCTTAAGATTTCTTCTTTGCTGTTTGGTTGGGCATCACAACCACCATGCTCACTGACGCTTGAGCTTTTAAGCTAAGATATATGGTTTTCTTATGGTGCTTTTATGTAGTATTATATTTAAAGCTTCCGAAAATCTAGAATCTTTTATGAATCCTATTGTCATCTAACAGCTATAGTTGCTAGAATTCACTTGTTTTGTATTTCTGTTTACCATTCACTGGGAGGTTTTTGACAGATTCCTCCACATTCAATAATGGGATTCTGGGTTCTGAAATTTAGAATTTTGAGTATTTCATATTAGGATTCACCATGTATGATTGAGTGACGGATTTTGCTTCACCAGTTTGAAACTCTCCTCCTCTTGTGCTCGTGAAATTTTCTTACACACTTTTTGGGGCCTGATTGTTTTCCATTCTACAATTCTGGTTCTACTTTATTCATGCATAGTTCAAGAATTCAGTTGAAGCTTCCTTGAACTACACAATTTTGCGGCTGCTGAATTGCATAAATTAATTTCACCGATGTCTTATTGGTTAGTGCATTCTCATTCTTGCATGCATTCCAATTCAACTAATGCACACGAATATCAAAGGGCGATTTCTTTATCTAGCATGTTGTATTTCTAGTGGTTTTGTGTGTGTTTGATCAACTCTTGTTATTACTATAAAAAATGATGCTGAGTTTGATGAGACTTGCCAGCTAAGAATTTCTTTCTGTCTTCTGTATATCCAGGGACTTTTGGACTTCCAATTTATTTTTTTCATCTTCTTTCCTCATCCTTAGAAATTGGCTATGAAAGATTAAACCATAAAATCTTGTCGGATGGTATACAAAGCAAATTAACATCTAGTACTGATAACAAAAACGGCTTAAGAAAATGAAAAGTTACTGTTTTTTTCACATTACATAAATCTACTTATGATAAGTTCGTAATCTCAACTTTTTCTTTATCTCGAAGTTCATGATCTCAAACATTGTGAGACTTACAATACAATTAACAGTTCACATGTATTATTCAGAATTTCTGTTATTCTCATAACTTATGTGAACAATGTGGTTCTCTACAGGACAAGGTGCTATAGGAGGCGACGTTTCACTATAGTAATGCAAAAGTTCGATGGGGCAAGTGAATTTTATGGTGCTAATGTTATGACACGACATGAATTTCAAGTAGTTCTATCTGCTAACTTGAATTGAACTCAACAATAAGTGCAGAAGCCAAAGAACAGGACTCAATTTGTAGCATATCAATATGTATCAATAAAGTGATTAATTTCAGCAATGGACGGAGTAAAGATTGTTTGGAGACCCTTGATACTGGAAATCTTTTGTTGCGTACTGTGAGAAGAGTGACATGTTTCAAGTAGAGTATGAATACGATTGTAGTCTTGGAAGTTGATTACAAACTACAGTTATGGTTTTTTTATGTGCAAATGATATATTATCAGCTGCTGTTAAGAATGTTAGCATTTGAAAAGTTATCTTTTTCTAG

mRNA sequence

ATGGATTCCGCCATATCTCTAATGGCCTCCAATTCCTTTCTCTCCACTCTCTCCTCCACCTCTGTTTCCACTATCTCCACACTTTCTTTCCCGCGTCGAGCTGCTCTTCCTCCCATACACCGTCGTCAGAAATTCATCTCCATTTTTGCGTCAGGTAATGGCAATGGCGGCAGGAAAAGAGGGAAAGGGAGAGGTGGAGGTGGCGGCGGCGATGATGGTGGACCCAAAGGCAGCGATGTCGACTCGAAATTGCTTGCTGGAGAAGCTGACGACGATGCCACGCTGTCTGCGGACGTCATTGTTCTCGGTGTTGAAGGGATGACGTGCAAGGGGTGTTGTGCGAGTGTCAAGAGGATTCTTGAAAGTCAGCCACAAGTGTCACATGCTAGTGTTGACCTTGCTTCTGAGACAGCAATCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTAGGAGTGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCGAAGGTTCAAGGACAAGGTGCTATAGGAGGCGACGTTTCACTATAG

Coding sequence (CDS)

ATGGATTCCGCCATATCTCTAATGGCCTCCAATTCCTTTCTCTCCACTCTCTCCTCCACCTCTGTTTCCACTATCTCCACACTTTCTTTCCCGCGTCGAGCTGCTCTTCCTCCCATACACCGTCGTCAGAAATTCATCTCCATTTTTGCGTCAGGTAATGGCAATGGCGGCAGGAAAAGAGGGAAAGGGAGAGGTGGAGGTGGCGGCGGCGATGATGGTGGACCCAAAGGCAGCGATGTCGACTCGAAATTGCTTGCTGGAGAAGCTGACGACGATGCCACGCTGTCTGCGGACGTCATTGTTCTCGGTGTTGAAGGGATGACGTGCAAGGGGTGTTGTGCGAGTGTCAAGAGGATTCTTGAAAGTCAGCCACAAGTGTCACATGCTAGTGTTGACCTTGCTTCTGAGACAGCAATCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTAGGAGTGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCGAAGGTTCAAGGACAAGGTGCTATAGGAGGCGACGTTTCACTATAG

Homology

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BLAST of CSPI07G05540 vs. Swiss-Prot
Match: HMA6_ARATH (Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-26
Identity = 79/157 (50.32%), Postives = 96/157 (61.15%), Query Frame = 1


Query: 19  STSVSTISTLSFPRRAALPPIHRRQKFISI----FASGNGNGGRKRGKGRGGGGGGDDGG 78
           S   S+ S L     A LP I  R + +S     F S +  GG   G   GG GGG  GG
Sbjct: 65  SRFTSSNSALRSLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGG 124

Query: 79  PKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQVSHASVDLA 138
            +  D  SKL A  +D  +  S+D+I+L V GMTC GC ASVK+ILESQPQV+ ASV+L 
Sbjct: 125 SESGDSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLT 184

Query: 139 SETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS 172
           +ETAIVWPV EAK  P+W++ LG  LA HLT CGF S
Sbjct: 185 TETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of CSPI07G05540 vs. Swiss-Prot
Match: HMA8_ARATH (Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana GN=PAA2 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.7e-06
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 1


Query: 100 IVLGVEGMTCKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVA 159
           I+L V GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T +  E    +
Sbjct: 78  ILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVTADTAE----S 137

Query: 160 LAKHLTTCGFSSK--VQGQG 178
           LAK LT  GF +K  V G G
Sbjct: 138 LAKRLTESGFEAKRRVSGMG 153

[Close]

BLAST of CSPI07G05540 vs. TrEMBL
Match: A0A0A0K5Z3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G062830 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 3.9e-87
Identity = 180/185 (97.30%), Postives = 181/185 (97.84%), Query Frame = 1


Query: 1   MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGGRKR 60
           MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGG  R
Sbjct: 1   MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGG-VR 60

Query: 61  GKGRGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRIL 120
           G+  GGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRIL
Sbjct: 61  GESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRIL 120

Query: 121 ESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIG 180
           ESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIG
Sbjct: 121 ESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIG 180

Query: 181 GDVSL 186
           GDVSL
Sbjct: 181 GDVSL 184

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BLAST of CSPI07G05540 vs. TrEMBL
Match: U5GWF6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s21260g PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 8.5e-34
Identity = 95/179 (53.07%), Postives = 126/179 (70.39%), Query Frame = 1


Query: 14  LSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISI----FASGNGNGGRKRGK-GRGGGG 73
           LS++ S + + +++  F     +P + RR + +S     F + +G GG   G+ G GGGG
Sbjct: 45  LSSICSHNNNALASSPF-LCTVVPLLRRRLECVSSSAASFGTSSGGGGGGGGEFGSGGGG 104

Query: 74  GGDDGGPKGSDVDSKLLAGE--ADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQV 133
           GG DGG    D +S  +AG   A++ + LS DVI+L V GMTC GC ASVKRILESQPQV
Sbjct: 105 GGSDGG----DAESNSVAGAVGAEEVSALSPDVIILDVGGMTCGGCAASVKRILESQPQV 164

Query: 134 SHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGGDVSL 186
           S ASV+LA+ETAIVWPV+EAK+ PNW++ELG ALAKHLT+CGF S ++GQGA  GD+S+
Sbjct: 165 SSASVNLATETAIVWPVSEAKVVPNWQKELGEALAKHLTSCGFMSNLRGQGATEGDISM 218

[Close]

BLAST of CSPI07G05540 vs. TrEMBL
Match: U5GQM2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s21260g PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-32
Identity = 96/181 (53.04%), Postives = 126/181 (69.61%), Query Frame = 1


Query: 14  LSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISI----FASGNGNGGRKRGK-GRGGGG 73
           LS++ S + + +++  F     +P + RR + +S     F + +G GG   G+ G GGGG
Sbjct: 45  LSSICSHNNNALASSPF-LCTVVPLLRRRLECVSSSAASFGTSSGGGGGGGGEFGSGGGG 104

Query: 74  GGDDGGPKGSDVDSKLLAGE--ADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQV 133
           GG DGG    D +S  +AG   A++ + LS DVI+L V GMTC GC ASVKRILESQPQV
Sbjct: 105 GGSDGG----DAESNSVAGAVGAEEVSALSPDVIILDVGGMTCGGCAASVKRILESQPQV 164

Query: 134 SHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS--KVQGQGAIGGDVS 186
           S ASV+LA+ETAIVWPV+EAK+ PNW++ELG ALAKHLT+CGF S  +V GQGA  GD+S
Sbjct: 165 SSASVNLATETAIVWPVSEAKVVPNWQKELGEALAKHLTSCGFMSNLRVAGQGATEGDIS 220

[Close]

BLAST of CSPI07G05540 vs. TrEMBL
Match: A0A067K6B3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20173 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.4e-31
Identity = 90/171 (52.63%), Postives = 115/171 (67.25%), Query Frame = 1


Query: 15  STLSSTSVSTISTLSFPR-RAALPPIHRRQKFISIFAS-------GNGNGGRKRGKGRGG 74
           S  S  +VS+ S+ +  R  + LP + RR + +S  AS       G+G GG   G G GG
Sbjct: 45  SVYSPRNVSSSSSSNLRRFYSLLPLLRRRSECVSNSASSFATSGGGSGGGGLFGGDGNGG 104

Query: 75  GGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQV 134
           GGGG+  G  G D  SKL AG A+D + LS+DVI+L V GMTC GC ASVKRILE+QPQV
Sbjct: 105 GGGGE--GYDGGDGKSKLAAGAAEDVSALSSDVIILDVGGMTCGGCAASVKRILENQPQV 164

Query: 135 SHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQG 178
           S ASV+L +E A+VWPV+EAK+ PNW+++LG  LAKHLT CGF S ++  G
Sbjct: 165 SSASVNLTTEIAVVWPVSEAKVVPNWQKQLGEELAKHLTNCGFKSNLRDAG 213

[Close]

BLAST of CSPI07G05540 vs. TrEMBL
Match: K4B287_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.4e-31
Identity = 81/153 (52.94%), Postives = 107/153 (69.93%), Query Frame = 1


Query: 34  AALPPIHRRQKFIS----IFASGNGNGGRKRGKGRGGGGGGDDGGPKGSDVDSKLLAGEA 93
           A L P+ +  + +S     FA+  G     RG G GGGGG  DG   G   +  ++A   
Sbjct: 80  ANLRPVQKDLRSVSRSAASFAASGGGNDNPRGNG-GGGGGNGDGATDGGKENPSVVAETG 139

Query: 94  DDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKIT 153
           +D + LS+DVI+L V GMTC GC +SVKRILESQPQVS A+V+L +ETAIVWPV++AK+ 
Sbjct: 140 EDISALSSDVIILDVTGMTCGGCASSVKRILESQPQVSSATVNLTTETAIVWPVSDAKVV 199

Query: 154 PNWREELGVALAKHLTTCGFSSKVQGQGAIGGD 183
           PNW+++LG ALAKHL+TCGF S V+G+GAI G+
Sbjct: 200 PNWQKQLGEALAKHLSTCGFKSNVRGEGAIEGE 231

[Close]

BLAST of CSPI07G05540 vs. TAIR10
Match: AT4G33520.2 (AT4G33520.2 P-type ATP-ase 1)

HSP 1 Score: 121.3 bits (303), Expect = 6.2e-28
Identity = 79/157 (50.32%), Postives = 96/157 (61.15%), Query Frame = 1


Query: 19  STSVSTISTLSFPRRAALPPIHRRQKFISI----FASGNGNGGRKRGKGRGGGGGGDDGG 78
           S   S+ S L     A LP I  R + +S     F S +  GG   G   GG GGG  GG
Sbjct: 65  SRFTSSNSALRSLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGG 124

Query: 79  PKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQVSHASVDLA 138
            +  D  SKL A  +D  +  S+D+I+L V GMTC GC ASVK+ILESQPQV+ ASV+L 
Sbjct: 125 SESGDSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLT 184

Query: 139 SETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS 172
           +ETAIVWPV EAK  P+W++ LG  LA HLT CGF S
Sbjct: 185 TETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of CSPI07G05540 vs. TAIR10
Match: AT5G21930.1 (AT5G21930.1 P-type ATPase of Arabidopsis 2)

HSP 1 Score: 53.1 bits (126), Expect = 2.1e-07
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 1


Query: 100 IVLGVEGMTCKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVA 159
           I+L V GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T +  E    +
Sbjct: 78  ILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVTADTAE----S 137

Query: 160 LAKHLTTCGFSSK--VQGQG 178
           LAK LT  GF +K  V G G
Sbjct: 138 LAKRLTESGFEAKRRVSGMG 153

[Close]

BLAST of CSPI07G05540 vs. NCBI nr
Match: gi|449438195|ref|XP_004136875.1| (PREDICTED: copper-transporting ATPase PAA1, chloroplastic [Cucumis sativus])

HSP 1 Score: 328.9 bits (842), Expect = 5.6e-87
Identity = 180/185 (97.30%), Postives = 181/185 (97.84%), Query Frame = 1


Query: 1   MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGGRKR 60
           MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGG  R
Sbjct: 1   MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGG-VR 60

Query: 61  GKGRGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRIL 120
           G+  GGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRIL
Sbjct: 61  GESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRIL 120

Query: 121 ESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIG 180
           ESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIG
Sbjct: 121 ESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIG 180

Query: 181 GDVSL 186
           GDVSL
Sbjct: 181 GDVSL 184

[Close]

BLAST of CSPI07G05540 vs. NCBI nr
Match: gi|659110400|ref|XP_008455207.1| (PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 310.8 bits (795), Expect = 1.6e-81
Identity = 171/191 (89.53%), Postives = 178/191 (93.19%), Query Frame = 1


Query: 1   MDSAISLMASNSFLSTLSS------TSVSTISTLSFPRRAALPPIHRRQKFISIFASGNG 60
           MDSAISLMASNSFLSTLS+      TS+STISTLSFP RAALPPIHRRQKF+S+FASGNG
Sbjct: 1   MDSAISLMASNSFLSTLSTIPRSSFTSISTISTLSFPLRAALPPIHRRQKFVSVFASGNG 60

Query: 61  NGGRKRGKGRGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCA 120
           NGG  RG+  GGGGGGDDGGP GSDVDSKLLAGEADDDATLSADVIV+GV GMTCKGCCA
Sbjct: 61  NGG-VRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCA 120

Query: 121 SVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ 180
           SVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ
Sbjct: 121 SVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ 180

Query: 181 GQGAIGGDVSL 186
           GQGAIGGDV+L
Sbjct: 181 GQGAIGGDVTL 190

[Close]

BLAST of CSPI07G05540 vs. NCBI nr
Match: gi|566150150|ref|XP_006369333.1| (hypothetical protein POPTR_0001s21260g [Populus trichocarpa])

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 95/179 (53.07%), Postives = 126/179 (70.39%), Query Frame = 1


Query: 14  LSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISI----FASGNGNGGRKRGK-GRGGGG 73
           LS++ S + + +++  F     +P + RR + +S     F + +G GG   G+ G GGGG
Sbjct: 45  LSSICSHNNNALASSPF-LCTVVPLLRRRLECVSSSAASFGTSSGGGGGGGGEFGSGGGG 104

Query: 74  GGDDGGPKGSDVDSKLLAGE--ADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQV 133
           GG DGG    D +S  +AG   A++ + LS DVI+L V GMTC GC ASVKRILESQPQV
Sbjct: 105 GGSDGG----DAESNSVAGAVGAEEVSALSPDVIILDVGGMTCGGCAASVKRILESQPQV 164

Query: 134 SHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGGDVSL 186
           S ASV+LA+ETAIVWPV+EAK+ PNW++ELG ALAKHLT+CGF S ++GQGA  GD+S+
Sbjct: 165 SSASVNLATETAIVWPVSEAKVVPNWQKELGEALAKHLTSCGFMSNLRGQGATEGDISM 218

[Close]

BLAST of CSPI07G05540 vs. NCBI nr
Match: gi|720042495|ref|XP_010269257.1| (PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Nelumbo nucifera])

HSP 1 Score: 148.7 bits (374), Expect = 1.0e-32
Identity = 85/149 (57.05%), Postives = 104/149 (69.80%), Query Frame = 1


Query: 38  PIHRRQKFISIFASG--NGNGGRKRGKGRGGGGGGDDGGPKGSDVDSKLLAGEADDDATL 97
           PI  R   IS   +   +G  G    +G GGGGG    G    +  SK + G++++ +TL
Sbjct: 81  PISSRMACISSSTASFASGGSGDDTNEGNGGGGGDSGDGSNNGETKSKSIGGDSEEVSTL 140

Query: 98  SADVIVLGVEGMTCKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREE 157
           S+DVI+L V GMTC GC ASVKRILESQPQVS ASV+LASETAIVWPVAE K+T NW+++
Sbjct: 141 SSDVIILHVGGMTCGGCAASVKRILESQPQVSSASVNLASETAIVWPVAEVKVTENWQQQ 200

Query: 158 LGVALAKHLTTCGFSSKVQGQGAIGGDVS 185
           LG  LAKHLT CGF S + GQGAI GD+S
Sbjct: 201 LGETLAKHLTNCGFKSDLHGQGAI-GDIS 228

[Close]

BLAST of CSPI07G05540 vs. NCBI nr
Match: gi|566150152|ref|XP_006369334.1| (hypothetical protein POPTR_0001s21260g [Populus trichocarpa])

HSP 1 Score: 147.9 bits (372), Expect = 1.8e-32
Identity = 96/181 (53.04%), Postives = 126/181 (69.61%), Query Frame = 1


Query: 14  LSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISI----FASGNGNGGRKRGK-GRGGGG 73
           LS++ S + + +++  F     +P + RR + +S     F + +G GG   G+ G GGGG
Sbjct: 45  LSSICSHNNNALASSPF-LCTVVPLLRRRLECVSSSAASFGTSSGGGGGGGGEFGSGGGG 104

Query: 74  GGDDGGPKGSDVDSKLLAGE--ADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQV 133
           GG DGG    D +S  +AG   A++ + LS DVI+L V GMTC GC ASVKRILESQPQV
Sbjct: 105 GGSDGG----DAESNSVAGAVGAEEVSALSPDVIILDVGGMTCGGCAASVKRILESQPQV 164

Query: 134 SHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS--KVQGQGAIGGDVS 186
           S ASV+LA+ETAIVWPV+EAK+ PNW++ELG ALAKHLT+CGF S  +V GQGA  GD+S
Sbjct: 165 SSASVNLATETAIVWPVSEAKVVPNWQKELGEALAKHLTSCGFMSNLRVAGQGATEGDIS 220

The following BLAST results are available for this feature:

BLAST of CSPI07G05540 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HMA6_ARATH	1.1e-26	50.32	Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 P...	[more]
HMA8_ARATH	3.7e-06	42.50	Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana GN=PAA2 P...	[more]

BLAST of CSPI07G05540 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5Z3_CUCSA	3.9e-87	97.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G062830 PE=4 SV=1	[more]
U5GWF6_POPTR	8.5e-34	53.07	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s21260g PE=4 SV=1	[more]
U5GQM2_POPTR	1.2e-32	53.04	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s21260g PE=4 SV=1	[more]
A0A067K6B3_JATCU	1.4e-31	52.63	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20173 PE=3 SV=1	[more]
K4B287_SOLLC	1.4e-31	52.94	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of CSPI07G05540 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33520.2	6.2e-28	50.32	P-type ATP-ase 1	[more]
AT5G21930.1	2.1e-07	42.50	P-type ATPase of Arabidopsis 2	[more]

BLAST of CSPI07G05540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438195\|ref\|XP_004136875.1\|	5.6e-87	97.30	PREDICTED: copper-transporting ATPase PAA1, chloroplastic [Cucumis sativus]	[more]
gi\|659110400\|ref\|XP_008455207.1\|	1.6e-81	89.53	PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cucumis melo]	[more]
gi\|566150150\|ref\|XP_006369333.1\|	1.2e-33	53.07	hypothetical protein POPTR_0001s21260g [Populus trichocarpa]	[more]
gi\|720042495\|ref\|XP_010269257.1\|	1.0e-32	57.05	PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Nelumbo nucifera...	[more]
gi\|566150152\|ref\|XP_006369334.1\|	1.8e-32	53.04	hypothetical protein POPTR_0001s21260g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006121	HMA_dom
IPR017969	Heavy-metal-associated_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
biological_process	GO:0060003	copper ion export
biological_process	GO:0008152	metabolic process
biological_process	GO:0098655	cation transmembrane transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004008	copper-exporting ATPase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0019829	cation-transporting ATPase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G05540.1	CSPI07G05540.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 104..148 score: 2.
IPR006121	Heavy metal-associated domain, HMA	PROFILE	PS50846	HMA_2	coord: 99..173 score: 13
IPR006121	Heavy metal-associated domain, HMA	unknown	SSF55008	HMA, heavy metal-associated domain	coord: 100..141 score: 3.4
IPR017969	Heavy-metal-associated, conserved site	PROSITE	PS01047	HMA_1	coord: 104..133 scor
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 100..172 score: 7.3
None	No IPR available	PANTHER	PTHR24093	FAMILY NOT NAMED	coord: 91..171 score: 9.0
None	No IPR available	PANTHER	PTHR24093:SF357	SUBFAMILY NOT NAMED	coord: 91..171 score: 9.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G05540	Cla012847	Watermelon (97103) v1	cpiwmB575
CSPI07G05540	Csa7G062830	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G05540	MELO3C018643	Melon (DHL92) v3.5.1	cpimeB538
CSPI07G05540	ClCG09G015420	Watermelon (Charleston Gray)	cpiwcgB541
CSPI07G05540	Lsi03G007630	Bottle gourd (USVL1VR-Ls)	cpilsiB536
CSPI07G05540	MELO3C018643.2	Melon (DHL92) v3.6.1	cpimedB523
CSPI07G05540	CsaV3_7G006490	Cucumber (Chinese Long) v3	cpicucB415
CSPI07G05540	Cla97C09G177410	Watermelon (97103) v2	cpiwmbB584
CSPI07G05540	Bhi05G000701	Wax gourd	cpiwgoB672
CSPI07G05540	Cucsa.217930	Cucumber (Gy14) v1	cgycpiB336
CSPI07G05540	CmaCh19G002550	Cucurbita maxima (Rimu)	cmacpiB538
CSPI07G05540	Cp4.1LG04g07080	Cucurbita pepo (Zucchini)	cpecpiB697
CSPI07G05540	Cp4.1LG15g02300	Cucurbita pepo (Zucchini)	cpecpiB262
CSPI07G05540	CsGy7G005160	Cucumber (Gy14) v2	cgybcpiB332
CSPI07G05540	Carg24508	Silver-seed gourd	carcpiB1008
CSPI07G05540	Carg26456	Silver-seed gourd	carcpiB0404

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G05540	Cucurbita maxima (Rimu)	cmacpiB143
CSPI07G05540	Cucurbita moschata (Rifu)	cmocpiB137
CSPI07G05540	Cucurbita moschata (Rifu)	cmocpiB529