MELO3C018579.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCAACCCACACACCACAAAATCTTCAATACTATATATCAAATATCAACTAAAGATCAGTACAAGAAAATGACACTTGGTATTGGTGGAGGAATCAGTATCGGCCTTGGTATTCCTGGCATCAATATATCGATCGGCGGAGGCATCGGTATCAGGGGTAGAAAGGGGGGGTGCAAGAGTCATGATCCTTCAAAAAAATGGACTGAAATTAAGAGTGTGAACGATCCTGCTATCATAGAAATTGCTAAGTTTGCAGTGAAAGTCTTCAACCAAAAACATGGAAACAATCTCCAGTTTCAAGCCGTTTTGGAAGCTTGGGTTGTTGTTCATGTTGATGGCAAGAAAGAGTATAGTATTGAATTAGTAGCAAAAGACTGTTTGCATCGTTGCCTCCAGTATCATGCTGTTGTGATTGAAATCTGTGGCACTCCCCCTGGCTGGAATCTTGTGTCTTTCAACCAAATCGTCGAGGAAAACTGAAAAAGTTATATGTATAATCGAAAGTTTATACTTATATATGTGCGAGATCTACGCAATAATAAATCTTATATGATACCGTAATGTTGACGATCTCTACTTTCTTTCTTCACTATATCTATTATAAAATAATCGAGGTCAAACGACGTTTTTAGTCCCGACGACCCTATATTTTGTGTTTTAGTTTTCGTTTTGGGTTCGTTGCACTC GGCAACCCACACACCACAAAATCTTCAATACTATATATCAAATATCAACTAAAGATCAGTACAAGAAAATGACACTTGGTATTGGTGGAGGAATCAGTATCGGCCTTGGTATTCCTGGCATCAATATATCGATCGGCGGAGGCATCGGTATCAGGGGTAGAAAGGGGGGGTGCAAGAGTCATGATCCTTCAAAAAAATGGACTGAAATTAAGAGTGTGAACGATCCTGCTATCATAGAAATTGCTAAGTTTGCAGTGAAAGTCTTCAACCAAAAACATGGAAACAATCTCCAGTTTCAAGCCGTTTTGGAAGCTTGGGTTGTTGTTCATGTTGATGGCAAGAAAGAGTATAGTATTGAATTAGTAGCAAAAGACTGTTTGCATCGTTGCCTCCAGTATCATGCTGTTGTGATTGAAATCTGTGGCACTCCCCCTGGCTGGAATCTTGTGTCTTTCAACCAAATCGTCGAGGAAAACTGAAAAAGTTATATGTATAATCGAAAGTTTATACTTATATATGTGCGAGATCTACGCAATAATAAATCTTATATGATACCGTAATGTTGACGATCTCTACTTTCTTTCTTCACTATATCTATTATAAAATAATCGAGGTCAAACGACGTTTTTAGTCCCGACGACCCTATATTTTGTGTTTTAGTTTTCGTTTTGGGTTCGTTGCACTC ATGACACTTGGTATTGGTGGAGGAATCAGTATCGGCCTTGGTATTCCTGGCATCAATATATCGATCGGCGGAGGCATCGGTATCAGGGGTAGAAAGGGGGGGTGCAAGAGTCATGATCCTTCAAAAAAATGGACTGAAATTAAGAGTGTGAACGATCCTGCTATCATAGAAATTGCTAAGTTTGCAGTGAAAGTCTTCAACCAAAAACATGGAAACAATCTCCAGTTTCAAGCCGTTTTGGAAGCTTGGGTTGTTGTTCATGTTGATGGCAAGAAAGAGTATAGTATTGAATTAGTAGCAAAAGACTGTTTGCATCGTTGCCTCCAGTATCATGCTGTTGTGATTGAAATCTGTGGCACTCCCCCTGGCTGGAATCTTGTGTCTTTCAACCAAATCGTCGAGGAAAACTGA MTLGIGGGISIGLGIPGINISIGGGIGIRGRKGGCKSHDPSKKWTEIKSVNDPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEYSIELVAKDCLHRCLQYHAVVIEICGTPPGWNLVSFNQIVEEN
BLAST of MELO3C018579.2 vs. NCBI nr
Match: ADN34263.1 (phloem filament protein [Cucumis melo subsp. melo]) HSP 1 Score: 280.4 bits (716), Expect = 3.2e-72 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of MELO3C018579.2 vs. NCBI nr
Match: ADN34264.1 (phloem filament protein [Cucumis melo subsp. melo]) HSP 1 Score: 166.4 bits (420), Expect = 6.8e-38 Identity = 86/135 (63.70%), Postives = 102/135 (75.56%), Query Frame = 0
BLAST of MELO3C018579.2 vs. NCBI nr
Match: XP_011658840.1 (PREDICTED: uncharacterized protein LOC105436098 [Cucumis sativus] >KGN43784.1 hypothetical protein Csa_7G067390 [Cucumis sativus]) HSP 1 Score: 157.5 bits (397), Expect = 3.2e-35 Identity = 73/102 (71.57%), Postives = 82/102 (80.39%), Query Frame = 0
BLAST of MELO3C018579.2 vs. NCBI nr
Match: XP_011658839.1 (PREDICTED: uncharacterized protein LOC105436097 [Cucumis sativus] >KGN43782.1 Phloem filament protein [Cucumis sativus]) HSP 1 Score: 120.9 bits (302), Expect = 3.3e-24 Identity = 73/133 (54.89%), Postives = 89/133 (66.92%), Query Frame = 0
BLAST of MELO3C018579.2 vs. NCBI nr
Match: XP_011658838.1 (PREDICTED: uncharacterized protein LOC105436096 [Cucumis sativus] >KGN43780.1 hypothetical protein Csa_7G067350 [Cucumis sativus]) HSP 1 Score: 120.6 bits (301), Expect = 4.3e-24 Identity = 72/134 (53.73%), Postives = 87/134 (64.93%), Query Frame = 0
BLAST of MELO3C018579.2 vs. TAIR10
Match: AT4G16500.1 (Cystatin/monellin superfamily protein) HSP 1 Score: 47.0 bits (110), Expect = 1.1e-05 Identity = 32/95 (33.68%), Postives = 50/95 (52.63%), Query Frame = 0
BLAST of MELO3C018579.2 vs. Swiss-Prot
Match: sp|Q84WT8|CYT4_ARATH (Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana OX=3702 GN=CYS4 PE=3 SV=2) HSP 1 Score: 47.0 bits (110), Expect = 2.0e-04 Identity = 32/95 (33.68%), Postives = 50/95 (52.63%), Query Frame = 0
BLAST of MELO3C018579.2 vs. TrEMBL
Match: tr|E5GCR5|E5GCR5_CUCME (Cysteine proteinase inhibitor OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 2.1e-72 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of MELO3C018579.2 vs. TrEMBL
Match: tr|E5GCR6|E5GCR6_CUCME (Cysteine proteinase inhibitor OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 4.5e-38 Identity = 86/135 (63.70%), Postives = 102/135 (75.56%), Query Frame = 0
BLAST of MELO3C018579.2 vs. TrEMBL
Match: tr|A0A0A0K477|A0A0A0K477_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067390 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.1e-35 Identity = 73/102 (71.57%), Postives = 82/102 (80.39%), Query Frame = 0
BLAST of MELO3C018579.2 vs. TrEMBL
Match: tr|A0A0A0K660|A0A0A0K660_CUCSA (Phloem filament protein OS=Cucumis sativus OX=3659 GN=Csa_7G067370 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.2e-24 Identity = 73/133 (54.89%), Postives = 89/133 (66.92%), Query Frame = 0
BLAST of MELO3C018579.2 vs. TrEMBL
Match: tr|A0A0A0K281|A0A0A0K281_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067350 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.8e-24 Identity = 72/134 (53.73%), Postives = 87/134 (64.93%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |