MELO3C017992 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C017992
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionUbiquitin carboxyl-terminal hydrolase 3
Locationchr7 : 26312560 .. 26314979 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTAATATATCTAAAGTGAAATTCTGTGTGCTCATCAATGGCGGAAGAAGCCGGTTCATCTTCGTCCACTTCCAACCAACTGGTACTCTAATCAAACTCATTCTATCAAGTTCTCTTTGATTGCCCTAAAAATTCCTGCTTCTTTTCTACATTTCTATCAATTTATTGAATCGCTGATCTGGGCTAATGTTGTTTTACGTCTTCTCTAGCCACTAATAATCGAAATCGAAGATGAAGTTGAGGAAGAACTCTTATACGGCGCCGGATCGGGATGGGTCCAGGCTCTTACTTCTTGCGATCATCTCGCTTCCTTATCTTCCGACCTCGCTCACATTCCGCCCCCTCAGACTCCCTGTAGCCAGTCAGTTTTTCTTTTCCATAAACTATGTTATTTTGTTGTTCATCTTAATCTTCGAATGTGTGTACCTTTCATTTTCATTTCCATTTCTGCTGAAGGCATTTGATGTTTTGATTCTTTGAGATTTTGCTTCATCAATCGAATCCTAATTGTTTTGGCTGATAATTGGTTTAAATTCTACGATTTTAATCCCTAAACTTTCAAGTTTCTCTCACTTTAGAAATGTCTATTTTGGTATGTGAACTTCCAAAATAATACTTTTTTTGGTTCTCAAACATTTTGAAATTTTAGGGACCAAAATAGTTTAAACATAAAAATTTGAAGACAGGTTATAGGTAGTAAAATGAGATTAAGGCTTCATAGATTTATCTTTGACAAACGAGGATGGTGGACTTGAGAGTTGAGCATAGTTTTTATGGTTAGGTAATAGTAGTTGACGTCTTTTATTTTGTGTTTTGGGTTTGAATCGCCTTACCTCATTTGCTAATGTGTAAATGAAAAGTTGTCTTTTGTGGACTTTAGGCGTTTAGGAAGATTCTAAAATTTGGTTACTGTCACCCTCTTCTCCTACGAGCTTTTATATAGAACCCAGACATATTGAAATATAAATGGGTTAGAATTTATAAGATTATCAAATAACAAGCACGTCAAGTTACTTGCACCTCACTTCTTGAGATCACTCCTAAGCTATAATTCACTCACCAAACTATTGTCTATCCACCTCCTTTCCCTTTTTTTTCTTTTTTTTTACATATCTAGAGAGTCATGCGAGCTTATGCAACTTTAATTAATCTCAAGAGATAACCCACTTGTCCCCTATAGTAGCAAGTGTCAATGAAACTCGTGGAATACTAAATCCTAAGAAGGTGATCATGATGGATTGAACTCATGATCCATTAGTTCTTTATTAAAGTTACGTGGTATTTTTTATAAGGCTAACACATGATGGTTATCTGAAAAATCCGATCTTTTCAATTACGTCCATAGACATTAAAGATTTAAAATTAAGTTTTCTAAATGGAGGCTTTTAAGCTCAAGATCTTGAAGGATATATGTCAACATCTCAAGTCTTTGCCACTAAGGCTATGCTTTGAAGTTAGTGTTCCACTGATATCATGCAAAAAAATTGAAGTTCTTCCATTTCAGCTAGACATCTTCTTTCGGTGGCTCTATATGAGTATAATGTACGTAGATGTTTTATAATCATAACATCCACATCAAAGTCAGGTTCTTTTCTGTCAATTTTTGTATGAATTGTAATTGACGTATTATTGCGTCTAATTTTACAAGTGCTTTCAGATCGATTTTTATTTGAGTTTATTTCCATGATTTAGATAAACGCATTTCTATTTGGTTTATTAATCCATTGAACAATCTACATGTGCAAGATGCCAGAATCCCAAGGAGAACTGGCTGTGTTTATGCTGTAAGGATGTCTTTTGTAGCCGTTTTGTGAATAAGCACATGCTTCAACATTATGAGCAATCAACTCATTGCCTTGCACTCAGCTACAGGTAAATGTAAAATGGTTCTTTAGATTCTACTCTAATTTCTGCTTTCTATAGGTCTAAAAAATTATAAACACAGGTTTTGTGATGCTCATTAATAATTTGCATTTGGAAACAGTGATTTGTCAGTTTGGTGTTTCTCCTGCGATGCATATTTGGATGCACAAGTGATTCAGGAATTACGACCAGTACACGAAGTTGCCTACATACTGAAATTTGGCGAGGCCCCACCCTTTCGATAGTATTAATCATCCTGCACTGGGGGAACCGAAATATCTGATTATTAGTGTTATAACTTTTCTAGTCTCTCCATATTAGGTGTTTTGATTTCTTGGTTTGTACATTTCGAGCAAATGGCTTATGATCTGCACATGAATTGGGTTGGGTTGTCATGTTCACGGTAAGTTGTTGGTTCACTTTACAGAAGTGAGGGATAGATTAGAATCTCCTATCTTGTTCAAGAAAATCATACGAAGCTTTTACTTGAAACTGATGAACTTCTTGTTTCAAACCTTGATGATAACATGAATGAAATTGGTTCCCCATTTTTGTC

mRNA sequence

TATTAATATATCTAAAGTGAAATTCTGTGTGCTCATCAATGGCGGAAGAAGCCGGTTCATCTTCGTCCACTTCCAACCAACTGCCACTAATAATCGAAATCGAAGATGAAGTTGAGGAAGAACTCTTATACGGCGCCGGATCGGGATGGGTCCAGGCTCTTACTTCTTGCGATCATCTCGCTTCCTTATCTTCCGACCTCGCTCACATTCCGCCCCCTCAGACTCCCTGTAGCCAATGCCAGAATCCCAAGGAGAACTGGCTGTGTTTATGCTGTAAGGATGTCTTTTGTAGCCGTTTTGTGAATAAGCACATGCTTCAACATTATGAGCAATCAACTCATTGCCTTGCACTCAGCTACAGTGATTTGTCAGTTTGGTGTTTCTCCTGCGATGCATATTTGGATGCACAAGTGATTCAGGAATTACGACCAGTACACGAAGTTGCCTACATACTGAAATTTGGCGAGGCCCCACCCTTTCGATAGTATTAATCATCCTGCACTGGGGGAACCGAAATATCTGATTATTAGTGTTATAACTTTTCTAGTCTCTCCATATTAGGTGTTTTGATTTCTTGGTTTGTACATTTCGAGCAAATGGCTTATGATCTGCACATGAATTGGGTTGGGTTGTCATGTTCACGGTAAGTTGTTGGTTCACTTTACAGAAGTGAGGGATAGATTAGAATCTCCTATCTTGTTCAAGAAAATCATACGAAGCTTTTACTTGAAACTGATGAACTTCTTGTTTCAAACCTTGATGATAACATGAATGAAATTGGTTCCCCATTTTTGTC

Coding sequence (CDS)

ATGGCGGAAGAAGCCGGTTCATCTTCGTCCACTTCCAACCAACTGCCACTAATAATCGAAATCGAAGATGAAGTTGAGGAAGAACTCTTATACGGCGCCGGATCGGGATGGGTCCAGGCTCTTACTTCTTGCGATCATCTCGCTTCCTTATCTTCCGACCTCGCTCACATTCCGCCCCCTCAGACTCCCTGTAGCCAATGCCAGAATCCCAAGGAGAACTGGCTGTGTTTATGCTGTAAGGATGTCTTTTGTAGCCGTTTTGTGAATAAGCACATGCTTCAACATTATGAGCAATCAACTCATTGCCTTGCACTCAGCTACAGTGATTTGTCAGTTTGGTGTTTCTCCTGCGATGCATATTTGGATGCACAAGTGATTCAGGAATTACGACCAGTACACGAAGTTGCCTACATACTGAAATTTGGCGAGGCCCCACCCTTTCGATAG

Protein sequence

MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR*
Homology
[Close]
BLAST of MELO3C017992 vs. Swiss-Prot
Match: HDAC6_HUMAN (Histone deacetylase 6 OS=Homo sapiens GN=HDAC6 PE=1 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 2.0e-18
Identity = 46/109 (42.20%), Postives = 58/109 (53.21%), Query Frame = 1 

Query: 38   VQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYE 97
            V  L  C HL ++    A       PC  C   +ENW+CL C  V+C R++N HMLQH+ 
Sbjct: 1107 VTPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHHG 1166

Query: 98   QSTHCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP 147
             S H L LSY DLS WC+ C AY+  Q + +   V  +A+  KFGE  P
Sbjct: 1167 NSGHPLVLSYIDLSAWCYYCQAYVHHQALLD---VKNIAHQNKFGEDMP 1212

[Close]
BLAST of MELO3C017992 vs. Swiss-Prot
Match: HDAC6_MOUSE (Histone deacetylase 6 OS=Mus musculus GN=Hdac6 PE=1 SV=3)

HSP 1 Score: 91.3 bits (225), Expect = 9.8e-18
Identity = 54/146 (36.99%), Postives = 71/146 (48.63%), Query Frame = 1 

Query: 1    MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP 60
            + E AG      N L L     D   +++ Y      V  L+ C HL ++    A     
Sbjct: 1011 LGEAAGGQDM--NSLMLTQGFGDFNTQDVFYA-----VTPLSWCPHLMAVCPIPAAGLDV 1070

Query: 61   QTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAY 120
              PC  C   +ENW+CL C  V+CSR+VN HM+ H+E S H L LS  DLS WC+ C AY
Sbjct: 1071 SQPCKTCGTVQENWVCLTCYQVYCSRYVNAHMVCHHEASEHPLVLSCVDLSTWCYVCQAY 1130

Query: 121  LDAQVIQELRPVHEVAYILKFGEAPP 147
            +     ++L+ V   A+  KFGE  P
Sbjct: 1131 VHH---EDLQDVKNAAHQNKFGEDMP 1146

[Close]
BLAST of MELO3C017992 vs. Swiss-Prot
Match: HDA6_CAEEL (Histone deacetylase 6 OS=Caenorhabditis elegans GN=hda-6 PE=3 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-16
Identity = 52/150 (34.67%), Postives = 74/150 (49.33%), Query Frame = 1 

Query: 1   MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP 60
           MA+++ SS S+S+              E++    +  V  L +C HL     ++  +PP 
Sbjct: 818 MADQSSSSGSSSSST------RPSHNLEIMDSGPAHAVVPLATCPHL----KEVKPLPPA 877

Query: 61  Q----TPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFS 120
           +    T CS+CQ   E W CL C    C RFVN+H + H+  S+H +ALS +DLSVWC+ 
Sbjct: 878 KINARTACSECQIGAEVWTCLTCYKYNCGRFVNEHAMMHHLSSSHPMALSMADLSVWCYP 937

Query: 121 CDAYLDAQVIQELRPVHEVAYILKFGEAPP 147
           CD+Y+       L      A+  KFGE  P
Sbjct: 938 CDSYVHNPA---LIGAKSAAHESKFGETMP 954

[Close]
BLAST of MELO3C017992 vs. Swiss-Prot
Match: SIR2A_DICDI (NAD-dependent deacetylase sir2A OS=Dictyostelium discoideum GN=sir2A PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.6e-12
Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = 1 

Query: 62  TPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL 121
           T C  C +  ENW+C+ C  V CSR VN H  +H+E + H ++ S+SD S WC++CD Y+
Sbjct: 32  TKCHACNDESENWICMTCGVVSCSRHVNGHAGEHFENTKHPISASFSDHSFWCYTCDTYV 91

[Close]
BLAST of MELO3C017992 vs. Swiss-Prot
Match: UBP44_HUMAN (Ubiquitin carboxyl-terminal hydrolase 44 OS=Homo sapiens GN=USP44 PE=1 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 1.8e-11
Identity = 27/84 (32.14%), Postives = 49/84 (58.33%), Query Frame = 1 

Query: 40  ALTSCDHLASL--SSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYE 99
           A+ +C H+  L  + D + + P +  C  C   +  W CL C  V C R++ +H L+H++
Sbjct: 3   AMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQ 62

Query: 100 QSTHCLALSYSDLSVWCFSCDAYL 122
           +S+H +AL  +++ V+C+ CD Y+
Sbjct: 63  ESSHPVALEVNEMYVFCYLCDDYV 86

[Close]
BLAST of MELO3C017992 vs. TrEMBL
Match: A0A0A0KT14_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000940 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 4.5e-78
Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 1 

Query: 1   MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP 60
           MAE+AGSSSSTSN L LIIE  DEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP
Sbjct: 1   MAEKAGSSSSTSNPLTLIIE--DEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP 60

Query: 61  QTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAY 120
           QTPCSQCQNPKENW+CLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAY
Sbjct: 61  QTPCSQCQNPKENWVCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAY 120

Query: 121 LDAQVIQELRPVHEVAYILKFGEAPPFR 149
           LDAQVIQELRPVHEVAYILKFGEAPPFR
Sbjct: 121 LDAQVIQELRPVHEVAYILKFGEAPPFR 146

[Close]
BLAST of MELO3C017992 vs. TrEMBL
Match: A0A061E839_THECC (Regulator of Vps4 activity in the MVB pathway protein OS=Theobroma cacao GN=TCM_007207 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 8.5e-61
Identity = 110/148 (74.32%), Postives = 129/148 (87.16%), Query Frame = 1 

Query: 1   MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP 60
           MA++AG+SSS    L +I+E ED+ +  L+YGA SGWV+A T CDHLASLSSDLAHIP P
Sbjct: 1   MADQAGASSS---HLKIILEEEDDYD--LIYGAESGWVEARTQCDHLASLSSDLAHIPTP 60

Query: 61  QTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAY 120
            TPC++CQ+P ENWLCLCCKDV CSRFVNKHML+HY+Q+THC+ALSYSDLSVWCF+CD Y
Sbjct: 61  NTPCNRCQHPSENWLCLCCKDVLCSRFVNKHMLEHYKQTTHCIALSYSDLSVWCFACDTY 120

Query: 121 LDAQVIQELRPVHEVAYILKFGEAPPFR 149
           LDAQVI++LRPVHE AYILKFGEAPP R
Sbjct: 121 LDAQVIRQLRPVHETAYILKFGEAPPHR 143

[Close]
BLAST of MELO3C017992 vs. TrEMBL
Match: M5VQ49_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013008mg PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-57
Identity = 108/148 (72.97%), Postives = 123/148 (83.11%), Query Frame = 1 

Query: 1   MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP 60
           MA +AGSSS+   + P +     E EEEL++GA SGWV A T CDHL SLS+DLAHIP P
Sbjct: 1   MAAQAGSSSAAQAE-PFV-----ENEEELIFGAESGWVAARTFCDHLPSLSTDLAHIPAP 60

Query: 61  QTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAY 120
            TPC++CQ+P ENWLCLCCKDV CSRFVNKHMLQH++Q+ HCLALSYSDLSVWCFSCDAY
Sbjct: 61  DTPCNRCQHPNENWLCLCCKDVLCSRFVNKHMLQHFQQTNHCLALSYSDLSVWCFSCDAY 120

Query: 121 LDAQVIQELRPVHEVAYILKFGEAPPFR 149
           LDAQVI +LR V+E AYILKFGEAPPFR
Sbjct: 121 LDAQVIPQLRGVYETAYILKFGEAPPFR 142

[Close]
BLAST of MELO3C017992 vs. TrEMBL
Match: D7SXS2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00620 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 7.5e-57
Identity = 102/143 (71.33%), Postives = 119/143 (83.22%), Query Frame = 1 

Query: 5   AGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPC 64
           A  +SS+S  L ++IE     +EE LYGA SGWV+A TSCDHLASLSSDL HIP P+TPC
Sbjct: 2   ANQASSSSTALEVLIE-----DEEFLYGAESGWVEARTSCDHLASLSSDLVHIPTPETPC 61

Query: 65  SQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYLDAQ 124
           ++C NP ENWLCLCCK+V CSRFVNKHML+HY++  HCLALSYSDLS+WCFSCDAYLDAQ
Sbjct: 62  NRCHNPSENWLCLCCKEVLCSRFVNKHMLEHYQKVNHCLALSYSDLSIWCFSCDAYLDAQ 121

Query: 125 VIQELRPVHEVAYILKFGEAPPF 148
            I +L PV+E AYILKFG+APPF
Sbjct: 122 AILQLHPVYETAYILKFGQAPPF 139

[Close]
BLAST of MELO3C017992 vs. TrEMBL
Match: W9SEY2_9ROSA (Histone deacetylase 6 OS=Morus notabilis GN=L484_000250 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 8.2e-56
Identity = 104/148 (70.27%), Postives = 118/148 (79.73%), Query Frame = 1 

Query: 1   MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP 60
           MA  AGSSS+     P      +E EEEL+YG  SGWV+A TSCDHL+SLSSDL HIP P
Sbjct: 1   MANRAGSSSAPPENPPT-----EEGEEELIYGGESGWVEARTSCDHLSSLSSDLTHIPTP 60

Query: 61  QTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAY 120
            TPC  C++P ENWLCLCCK+V CSRFVNKHML HY  ++H LALSYSDLSVWCFSCDAY
Sbjct: 61  DTPCHICEHPDENWLCLCCKEVLCSRFVNKHMLNHYHNTSHSLALSYSDLSVWCFSCDAY 120

Query: 121 LDAQVIQELRPVHEVAYILKFGEAPPFR 149
           LDAQVI++LRPV+E AY+LKFGEAPP R
Sbjct: 121 LDAQVIRQLRPVYETAYLLKFGEAPPSR 143

[Close]
BLAST of MELO3C017992 vs. TAIR10
Match: AT2G14830.1 (AT2G14830.1 Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 69.7 bits (169), Expect = 1.7e-12
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 1 

Query: 1  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP 60
          MAE+A SSSS+S+      E+ DE ++ +L GAGSGWV+A  +CDHL +LS DL H+P P
Sbjct: 1  MAEKAPSSSSSSSPPK---EVADETQDWIL-GAGSGWVEARKTCDHLNTLSPDLLHLPTP 60

Query: 61 QTPCSQ 67
           TPCS+
Sbjct: 61 DTPCSR 62

[Close]
BLAST of MELO3C017992 vs. NCBI nr
Match: gi|659108780|ref|XP_008454385.1| (PREDICTED: histone deacetylase 6 [Cucumis melo])

HSP 1 Score: 315.1 bits (806), Expect = 6.7e-83
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

Query: 1   MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP 60
           MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP
Sbjct: 1   MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP 60

Query: 61  QTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAY 120
           QTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAY
Sbjct: 61  QTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAY 120

Query: 121 LDAQVIQELRPVHEVAYILKFGEAPPFR 149
           LDAQVIQELRPVHEVAYILKFGEAPPFR
Sbjct: 121 LDAQVIQELRPVHEVAYILKFGEAPPFR 148

[Close]
BLAST of MELO3C017992 vs. NCBI nr
Match: gi|449469124|ref|XP_004152271.1| (PREDICTED: histone deacetylase 6 [Cucumis sativus])

HSP 1 Score: 298.5 bits (763), Expect = 6.4e-78
Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 1 

Query: 1   MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP 60
           MAE+AGSSSSTSN L LIIE  DEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP
Sbjct: 1   MAEKAGSSSSTSNPLTLIIE--DEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP 60

Query: 61  QTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAY 120
           QTPCSQCQNPKENW+CLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAY
Sbjct: 61  QTPCSQCQNPKENWVCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAY 120

Query: 121 LDAQVIQELRPVHEVAYILKFGEAPPFR 149
           LDAQVIQELRPVHEVAYILKFGEAPPFR
Sbjct: 121 LDAQVIQELRPVHEVAYILKFGEAPPFR 146

[Close]
BLAST of MELO3C017992 vs. NCBI nr
Match: gi|590687256|ref|XP_007042612.1| (Regulator of Vps4 activity in the MVB pathway protein [Theobroma cacao])

HSP 1 Score: 241.1 bits (614), Expect = 1.2e-60
Identity = 110/148 (74.32%), Postives = 129/148 (87.16%), Query Frame = 1 

Query: 1   MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP 60
           MA++AG+SSS    L +I+E ED+ +  L+YGA SGWV+A T CDHLASLSSDLAHIP P
Sbjct: 1   MADQAGASSS---HLKIILEEEDDYD--LIYGAESGWVEARTQCDHLASLSSDLAHIPTP 60

Query: 61  QTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAY 120
            TPC++CQ+P ENWLCLCCKDV CSRFVNKHML+HY+Q+THC+ALSYSDLSVWCF+CD Y
Sbjct: 61  NTPCNRCQHPSENWLCLCCKDVLCSRFVNKHMLEHYKQTTHCIALSYSDLSVWCFACDTY 120

Query: 121 LDAQVIQELRPVHEVAYILKFGEAPPFR 149
           LDAQVI++LRPVHE AYILKFGEAPP R
Sbjct: 121 LDAQVIRQLRPVHETAYILKFGEAPPHR 143

[Close]
BLAST of MELO3C017992 vs. NCBI nr
Match: gi|657962890|ref|XP_008373046.1| (PREDICTED: histone deacetylase 6 [Malus domestica])

HSP 1 Score: 239.6 bits (610), Expect = 3.6e-60
Identity = 112/148 (75.68%), Postives = 124/148 (83.78%), Query Frame = 1 

Query: 1   MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP 60
           MA +AGSSS+  +Q         E EE+L YGA SGWV+A TSCDHLASLSSDLAHIP P
Sbjct: 1   MAAQAGSSSAQEDQFL-------ENEEDLFYGAESGWVEARTSCDHLASLSSDLAHIPTP 60

Query: 61  QTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAY 120
            T C++CQ+P ENWLCLCCKDV CSRFVNKHMLQHY+QS HCLALSYSDLSVWCFSCDAY
Sbjct: 61  DTACNRCQHPNENWLCLCCKDVLCSRFVNKHMLQHYQQSNHCLALSYSDLSVWCFSCDAY 120

Query: 121 LDAQVIQELRPVHEVAYILKFGEAPPFR 149
           LDAQ+I +LRPV+E AYILKFGEAPPFR
Sbjct: 121 LDAQLIPQLRPVYETAYILKFGEAPPFR 141

[Close]
BLAST of MELO3C017992 vs. NCBI nr
Match: gi|694414340|ref|XP_009335394.1| (PREDICTED: histone deacetylase 6-like [Pyrus x bretschneideri])

HSP 1 Score: 238.8 bits (608), Expect = 6.1e-60
Identity = 112/148 (75.68%), Postives = 124/148 (83.78%), Query Frame = 1 

Query: 1   MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPP 60
           MA +AGSSS+  +Q         E EE+L YGA SGWV+A TSCDHLASLSSDLAHIP P
Sbjct: 1   MAAQAGSSSAQEDQFL-------ENEEDLFYGAESGWVEARTSCDHLASLSSDLAHIPIP 60

Query: 61  QTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAY 120
            T C++CQ+P ENWLCLCCKDV CSRFVNKHMLQHY+QS HCLALSYSDLSVWCFSCDAY
Sbjct: 61  DTACNRCQHPNENWLCLCCKDVLCSRFVNKHMLQHYQQSNHCLALSYSDLSVWCFSCDAY 120

Query: 121 LDAQVIQELRPVHEVAYILKFGEAPPFR 149
           LDAQ+I +LRPV+E AYILKFGEAPPFR
Sbjct: 121 LDAQLIPQLRPVYETAYILKFGEAPPFR 141

The following BLAST results are available for this feature:
BLAST of MELO3C017992 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HDAC6_HUMAN2.0e-1842.20Histone deacetylase 6 OS=Homo sapiens GN=HDAC6 PE=1 SV=2[more]
HDAC6_MOUSE9.8e-1836.99Histone deacetylase 6 OS=Mus musculus GN=Hdac6 PE=1 SV=3[more]
HDA6_CAEEL1.4e-1634.67Histone deacetylase 6 OS=Caenorhabditis elegans GN=hda-6 PE=3 SV=2[more]
SIR2A_DICDI3.6e-1245.00NAD-dependent deacetylase sir2A OS=Dictyostelium discoideum GN=sir2A PE=2 SV=1[more]
UBP44_HUMAN1.8e-1132.14Ubiquitin carboxyl-terminal hydrolase 44 OS=Homo sapiens GN=USP44 PE=1 SV=2[more]
BLAST of MELO3C017992 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KT14_CUCSA4.5e-7895.95Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000940 PE=4 SV=1[more]
A0A061E839_THECC8.5e-6174.32Regulator of Vps4 activity in the MVB pathway protein OS=Theobroma cacao GN=TCM_... [more]
M5VQ49_PRUPE1.2e-5772.97Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013008mg PE=4 SV=1[more]
D7SXS2_VITVI7.5e-5771.33Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00620 PE=4 SV=... [more]
W9SEY2_9ROSA8.2e-5670.27Histone deacetylase 6 OS=Morus notabilis GN=L484_000250 PE=4 SV=1[more]
BLAST of MELO3C017992 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G14830.11.7e-1254.55 Regulator of Vps4 activity in the MVB pathway protein[more]
BLAST of MELO3C017992 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659108780|ref|XP_008454385.1|6.7e-83100.00PREDICTED: histone deacetylase 6 [Cucumis melo][more]
gi|449469124|ref|XP_004152271.1|6.4e-7895.95PREDICTED: histone deacetylase 6 [Cucumis sativus][more]
gi|590687256|ref|XP_007042612.1|1.2e-6074.32Regulator of Vps4 activity in the MVB pathway protein [Theobroma cacao][more]
gi|657962890|ref|XP_008373046.1|3.6e-6075.68PREDICTED: histone deacetylase 6 [Malus domestica][more]
gi|694414340|ref|XP_009335394.1|6.1e-6075.68PREDICTED: histone deacetylase 6-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000286His_deacetylse
IPR001607Znf_UBP
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU64421melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C017992T1MELO3C017992T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU64421MU64421transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000286Histone deacetylase superfamilyPANTHERPTHR10625HISTONE DEACETYLASEcoord: 19..146
score: 3.0
IPR001607Zinc finger, UBP-typePFAMPF02148zf-UBPcoord: 64..122
score: 3.8
IPR001607Zinc finger, UBP-typeSMARTSM00290Zf_UBP_1coord: 63..112
score: 6.0
IPR001607Zinc finger, UBP-typePROFILEPS50271ZF_UBPcoord: 62..123
score: 17
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 42..130
score: 3.3
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 42..134
score: 4.24