MELO3C016688 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C016688
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description60S ribosomal protein L18a-1
Locationchr7 : 2848411 .. 2852502 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTGATCCATTTCGGCCGACGGTTTCGTTTCTAGAGAGAGAGAATGAGCCAAGAAGACAAATCCGCCGCTGTGGGTGTCGTCGTCCACCACCATCACGAATCCAATTCCGCCCATCCTCACTACGGAACCTTCCAAGGCGTCGCTAATTATCCTCCCGTCGAATTCCCTCAGCCTACTCGCCCGCCTGGTCTCTCTGACTCCGACGATCCTTCTCAATATCAGCACTATGCTCACGGCTATCAAGCTGTACCCGGTAACCTCTTCTTTCTCAATCTTTTCTCACTTGTTAATCTGGTGTCAGATTTTTCTTTTGCTTCTTGTACGATGTCTTCGATCTCATGCCTTTCCGTTGACTTGAACTACTGATCTTTGTTGCTATGTCAAATGTCTTTAGTTGTACTCCAGTAAAAGGTTGTTCTAATCACTTGAATAACCTAGTTCCGTCCGAATCTTGAAATTATCATCTACTGAAGTGCCAAACATGGATTAATAATCTTTTAGTCGTCATATATTTTGTTATCTGTAATTTCATTTGGAATTTAACCTTCAGCTTTCTAGTTCCTGCTAGTACTAGGTTTTTGTTGAGCTTGAGATTAGATCCTGCCTTTTCTTGTTCTGAAAGTGTGCTTTTATATTGGGGTCTGCTTGGAAGTTTATAATTCAAAATTGAAAGAAAGAAAAAAATAGAATAGAGTAGGAAGCCACTTCTAACTTATGATCATACTTAACAACGCTCACAATGAAGTATTGTAGTTTATCAGTGTTATTTACTTTGAAGCTTTTTGTTATGGCAAACATTCGACAAAAACTTTGGTAGGATTCTTATTATATGTTTAGGAGTGATTTTGGAACAGTGAAAAATAACTTTTGTCATGTTCAAGATCACTCTAAAACACGCTTTTAATTGTAATAATATGAAATCTTCGTTTAAAAGGTGTAAAATGAAATATTGAATTGATTTTTGAGTTATTAAAAGTGTATTCCAAAGTGATTTTAGGCATGATGAAAGTGATTTTAACCATTTCAAAATCACTACCAAACATGTACATAACAAAAGTTGATTCTCTTTTGACTCTTGAAATTCTTGATTTTAGCATTCTGAAATGCGTATGCTCTCTTTCCCTTTTGCATTTCGAGACGAATATGGGTGAAAATAAATGCCATGGTTTTATATATTCATATTCAACCCTTTTTCTCTCTGAGATTTGTTGTTGCACTATAAAATTTTCTTTAGTTTCTTTTTGTTGGCTGTAACTTTGTGTAACTTCTTCTAAAATAGACTCTCGGATTTGCTTAACATATATCAGTACAAAGACAAAAGTTGTAACTCAAAATTTTCTTTTATTTATCTATTTATGAATTCTTCCAGGATATGCTATTGTTGAAGGAAGACCAGTGAGAGAGCCGCCCCTTCCTTGCTGTGGCATTGGCATTGGGTGGTTCCTGTAAGTAGCCATAATTGTTGGACTTTATCATCATTTACATTACACTAGCATTGCCATCATAAACAAGCCAGGTGATATCATTATTGCCACAATAAGTGGGCGTTTAGAGGGGCTGAGTTGGTTGTAATAATTAGTGGTCGTTATAGCCTGTGAGTTATAATACTTTGTAGTTTATAATATTCTATGTTTGGAGTATAGGTTACTTTAGTTTGAGTGTGAAATAGTAAACATTGTAACAAAGAGAGAAAAAGAAGATGAATAAGAAATAACATGCACTATATTGAAGAGGGATTTAAAATGGTAATATGTAGTTAATTATATGTTATAATAGTTGAAAATACTAATTATTATAATTGGAGTCCCAAACACAAAGTGTGCTATCATAGTCCACTCCACGCACTTGAAGTTTGTAGGTCAAACACCTCTAGGCATTTTAAAGTGTCAGTGGTTATTTGGTCAGAAAGTTATCAATCCGTAAGATGATGCGAATGCTACATGATATGAAAACCTTAGGATTTGAAAATTAGAAATCCAGTTGGTGAACCCCTAGCATCAAATTCTAAAACTTCCAATTTAATTTGACAACAATCCAAGGGAATGGATTCTATTTGGATCACTCTTTGATCAAAGACCGAGAGATAAGGAGAACTAATTCCTCACTCCAAGTTCGGAAACTTTACAAGCAAGGTGATCAAACTTACCTGAATGTTTTTGGCATGCAACATTGAGTCAAAAATTGCAAAAGAATGACGATGAGACTCTGTCATCTATCAGAGAATTTTTATTGAAAGAAAACCCCAGATCTTCAAAATATAACAAACTAATGTTTCCAATACTTTATACCCAAACTATTGTACTAAAAAAGACAAAAAAAGTCTATTTTACCACTAACTCAAAGGAGCTAAAACTCAAATAAATATGTATGGGTCTAAAAATAAAAGCCCACAAATAAGGTATGTTTTTACAAAATAAAACAAATTACAAAACTAAATTGGTTTGATCCCATAGCCTCAGCTGACTCCAATTATAAATCCTCTAATCAATTGTTGCTGCTTGAATCTCCTTAATTGAGTTTACCTCCTCATGAATGTGAGAATTCAATGCTAACACGTGATTCATCTAGGAGGTAACGCAAGGGAGTCTTGATTCATATCACTACAACTTCCATCTTATGAACTAAAATCAATCAGCTTCTAGATTGGAATGATAGAATTGCTAGTGTGTCATGCATTCTTTTCTTTATCTTGCTATTTAAAAATTTCCCAGATTTTTGTGTCTACATATGAGTGGCCTGATAAAAAAAAAGAATACTGTGTTTTTCAGGTTTATTATTGGTTTCTTCCTTGCTGCTATCCCATGGTATGCTGGAGCAATTCTTATACTATGTGGCAGGGTTGACTACCGTGAGAAACCAGGATATGTTGCCTGCTCAATTGCTGTGAGTAACTTTTCATTATTATTTTAGACTTCTTCAGCTTCATGACGATGTTCTTATATCTCCAATATAGTTCTGCAATAGGTTTAATCACGAGAACTGATTTTTCTGTTATATTTCTTTGCAACTTGCCAAAAGATATATTGGATTAGTTGGTTAAAGCAGGAAAAGGCATTCGGGAGTCGATGGTTGTAATTTGTCAAAAACTAGACCTTTTAGTATCTTGAGCAACGTTTGACAGTAAACAAACTTGATTTGTTACTTGCTTCTTTCTATAAAGATTATTACTTGTTGGAAAGCTTTAACTAAAAAAAATTGTTATAAAATGAGTTAGTATATAAGTCATAAGTCATCCGGAATAAGTTCATTTATTCTCTTTCCTTTTATTTTCTATTAGAACTGTTTATTTTCTTAAACACTAAATGCCAGAAAATGCTCCACGTAGGGGTTAGACGGGGACGCGGCCCCCTCAATTTTATTAGTAAACGCAATAGTATTTAATATATCTTTACTCATTAACCAAGTTAGCCCGGTACCTCGTTGTTTTTGGCTGACACTATTGCAATTTAGATTTCTGCGTTTGATGTTTTTATTATGAAAAAAAATGCTCGGCTATTTGTAAATGTGTATGCATATGAATTTGTGCCCCTGACATAAATGTCTTGATCCACCACCGTTGCAAGCTAATATTATTATGTTGCATGTCAGGCTGTTATTGCCACACTTGCAATTATATTCGGTGCAACAAGGGAAGCTGATGTCTGGTAACCAATCCTAAACTTAAAGTATTGTACAGTTTGCAAATATGTATGAACTGACAGAGCCCATGGGCAAGCTTAGTTCCATTGAAACCTGAATCTGTGAGAGCCTATCACTACAAGAAATTACACTTTTCCCAATGGATAAACTCATTGGGAAAACTCCGAAAAGCTTCTGGAAAATTTCTCCCGACGCCACATTGGCCATTGTCATGATCGTCAGGAAAGATTTCCTCGGGAGAAGCTTAATTTCTTGTGGTGTATAGATATTGGTTAGTGGTTGTTTCCATGTTGTGCCCCTAAGAAGCTGTGCCTGCAAAATCATGTTATTTGTTTTAAATCTACGATATGTGTTATGATGACTATTCATCTTAAACTCATGTGTAGAAACCTACTTATCCTTTGGTAAATATATTTCTTTCTGCTTGTTTGGAATAAGCATTTGAACATC

mRNA sequence

AATTTGATCCATTTCGGCCGACGGTTTCGTTTCTAGAGAGAGAGAATGAGCCAAGAAGACAAATCCGCCGCTGTGGGTGTCGTCGTCCACCACCATCACGAATCCAATTCCGCCCATCCTCACTACGGAACCTTCCAAGGCGTCGCTAATTATCCTCCCGTCGAATTCCCTCAGCCTACTCGCCCGCCTGGTCTCTCTGACTCCGACGATCCTTCTCAATATCAGCACTATGCTCACGGCTATCAAGCTGTACCCGGATATGCTATTGTTGAAGGAAGACCAGTGAGAGAGCCGCCCCTTCCTTGCTGTGGCATTGGCATTGGGTGGTTCCTGTTTATTATTGGTTTCTTCCTTGCTGCTATCCCATGGTATGCTGGAGCAATTCTTATACTATGTGGCAGGGTTGACTACCGTGAGAAACCAGGATATGTTGCCTGCTCAATTGCTGCTGTTATTGCCACACTTGCAATTATATTCGGTGCAACAAGGGAAGCTGATGTCTGGTAACCAATCCTAAACTTAAAGTATTGTACAGTTTGCAAATATGTATGAACTGACAGAGCCCATGGGCAAGCTTAGTTCCATTGAAACCTGAATCTGTGAGAGCCTATCACTACAAGAAATTACACTTTTCCCAATGGATAAACTCATTGGGAAAACTCCGAAAAGCTTCTGGAAAATTTCTCCCGACGCCACATTGGCCATTGTCATGATCGTCAGGAAAGATTTCCTCGGGAGAAGCTTAATTTCTTGTGGTGTATAGATATTGGTTAGTGGTTGTTTCCATGTTGTGCCCCTAAGAAGCTGTGCCTGCAAAATCATGTTATTTGTTTTAAATCTACGATATGTGTTATGATGACTATTCATCTTAAACTCATGTGTAGAAACCTACTTATCCTTTGGTAAATATATTTCTTTCTGCTTGTTTGGAATAAGCATTTGAACATC

Coding sequence (CDS)

ATGAGCCAAGAAGACAAATCCGCCGCTGTGGGTGTCGTCGTCCACCACCATCACGAATCCAATTCCGCCCATCCTCACTACGGAACCTTCCAAGGCGTCGCTAATTATCCTCCCGTCGAATTCCCTCAGCCTACTCGCCCGCCTGGTCTCTCTGACTCCGACGATCCTTCTCAATATCAGCACTATGCTCACGGCTATCAAGCTGTACCCGGATATGCTATTGTTGAAGGAAGACCAGTGAGAGAGCCGCCCCTTCCTTGCTGTGGCATTGGCATTGGGTGGTTCCTGTTTATTATTGGTTTCTTCCTTGCTGCTATCCCATGGTATGCTGGAGCAATTCTTATACTATGTGGCAGGGTTGACTACCGTGAGAAACCAGGATATGTTGCCTGCTCAATTGCTGCTGTTATTGCCACACTTGCAATTATATTCGGTGCAACAAGGGAAGCTGATGTCTGGTAA

Protein sequence

MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW*
Homology
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BLAST of MELO3C016688 vs. Swiss-Prot
Match: R18AL_ARATH (60S ribosomal protein L18a-like protein OS=Arabidopsis thaliana GN=At1g29970 PE=2 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 8.0e-31
Identity = 67/139 (48.20%), Postives = 87/139 (62.59%), Query Frame = 1 

Query: 26  HYGTFQGVANYP----PVEFPQPTRP----PG--LSDSDDPSQYQHYAHGYQAV-PGYAI 85
           +YGTFQGVAN+P    P +F QP  P    PG    +        +YA G+  V P Y +
Sbjct: 20  YYGTFQGVANFPTPTPPPQFMQPQHPITTFPGHAYQNLQGHGGGVNYAQGFPVVVPDYTV 79

Query: 86  VEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRVDYREKPGYVACSIA 145
           VE RP+ E  LPCCG+G+GWFLFI+GF    IPWY GA ++L   VD+REK GYVACSIA
Sbjct: 80  VEVRPMIEHELPCCGLGMGWFLFIMGFLFGGIPWYLGAFIVLVTSVDHREKAGYVACSIA 139

Query: 146 AVIATLAIIFGATREADVW 154
           +V+  +A++ G T + ++W
Sbjct: 140 SVVYLIAVMLGMTGDINIW 158

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BLAST of MELO3C016688 vs. TrEMBL
Match: A0A0A0L1Y0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G621210 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 5.0e-80
Identity = 141/153 (92.16%), Postives = 146/153 (95.42%), Query Frame = 1 

Query: 1   MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQ 60
           MS++DKSAAVGVVVHHHHESNS HPHYGTFQGVANYPPV F  PTR PG+ DSDDPSQYQ
Sbjct: 1   MSEQDKSAAVGVVVHHHHESNSPHPHYGTFQGVANYPPVGFSHPTRLPGVPDSDDPSQYQ 60

Query: 61  HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRV 120
           HYAHGYQAVPGYAIVEGRPVREP LPCCGIGIGWFLFIIGFFLAAIPWYAGAILI+CGRV
Sbjct: 61  HYAHGYQAVPGYAIVEGRPVREPRLPCCGIGIGWFLFIIGFFLAAIPWYAGAILIICGRV 120

Query: 121 DYREKPGYVACSIAAVIATLAIIFGATREADVW 154
           DYREKPGYVACSIAAVIAT+AIIFGATREADVW
Sbjct: 121 DYREKPGYVACSIAAVIATVAIIFGATREADVW 153

[Close]
BLAST of MELO3C016688 vs. TrEMBL
Match: A0A067LCW3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20159 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 8.0e-54
Identity = 102/156 (65.38%), Postives = 118/156 (75.64%), Query Frame = 1 

Query: 1   MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPP---VEFPQPTRPPGLSDSDDPS 60
           MS+E+K  + GVVV HHH  N   P YGTFQGVANYP    + FPQP  PPG ++   P 
Sbjct: 1   MSEEEKGQSRGVVVDHHHHQNP-QPQYGTFQGVANYPQQPVIGFPQPVPPPGATEPSAPP 60

Query: 61  QYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILC 120
           QY  YAHGYQ VPGYA+ +GRPVRE  LPCCGIG+GWFLFIIGFFL AIPWY G  +ILC
Sbjct: 61  QY--YAHGYQTVPGYAVADGRPVREHRLPCCGIGLGWFLFIIGFFLGAIPWYVGLFIILC 120

Query: 121 GRVDYREKPGYVACSIAAVIATLAIIFGATREADVW 154
            R+D REKPGY+AC+IAAV+AT+AII G T+ AD W
Sbjct: 121 ARIDPREKPGYIACTIAAVLATVAIILGVTKGADDW 153

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BLAST of MELO3C016688 vs. TrEMBL
Match: W9QZI1_9ROSA (60S ribosomal protein L18a-1 OS=Morus notabilis GN=L484_024642 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.6e-52
Identity = 98/164 (59.76%), Postives = 123/164 (75.00%), Query Frame = 1 

Query: 1   MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPP---------VEFPQPTRPPGLS 60
           MS+E+      VV HHHH+ ++  P YGTFQGVANYPP         + FPQP  PPG++
Sbjct: 1   MSEENDKKPAIVVDHHHHQEHN-QPQYGTFQGVANYPPPRPPHHQPAIGFPQPVPPPGVA 60

Query: 61  DSDDPSQYQ--HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWY 120
           +   PS +   +YA GYQ VPGYA+ EGRPVRE  LPCCGIGIGWFLFIIGFFLA +PWY
Sbjct: 61  E---PSAHHPDYYARGYQTVPGYAVAEGRPVRERRLPCCGIGIGWFLFIIGFFLAGVPWY 120

Query: 121 AGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW 154
           AGA+++LC R+DYREKPGY+AC++AA++AT+AI+ G T+ AD W
Sbjct: 121 AGALILLCSRIDYREKPGYIACTVAAILATIAIVLGVTKGADDW 160

[Close]
BLAST of MELO3C016688 vs. TrEMBL
Match: A0A151S283_CAJCA (60S ribosomal protein L18a-1 OS=Cajanus cajan GN=KK1_029397 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.3e-50
Identity = 100/165 (60.61%), Postives = 114/165 (69.09%), Query Frame = 1 

Query: 1   MSQEDKSAAVGVVVHHHHESNSAHPH----YGTFQGVANYPP--------VEFPQPTRPP 60
           M+ EDK  A     HHHH      P+    YGTFQGV+NYPP        + FPQP  PP
Sbjct: 1   MTDEDKPKAFSADHHHHHPPPPPQPYPAAQYGTFQGVSNYPPPPPQQHPAIGFPQPVPPP 60

Query: 61  GLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPW 120
           G+ DS  P     Y  GYQAVPGYA+ EGRPVREP L CCGIG GW LFI+GFFLA IPW
Sbjct: 61  GVGDSSAPPP--PYYSGYQAVPGYAVAEGRPVREPRLGCCGIGCGWCLFILGFFLAGIPW 120

Query: 121 YAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW 154
           Y GAI++LC RVDYREKPGYVAC +AAV+AT+AIIFG T+ A+ W
Sbjct: 121 YVGAIIMLCSRVDYREKPGYVACIVAAVLATIAIIFGVTKGAEDW 163

[Close]
BLAST of MELO3C016688 vs. TrEMBL
Match: B9SVW7_RICCO (60S ribosomal protein L18a, plant, putative OS=Ricinus communis GN=RCOM_0747380 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.0e-48
Identity = 98/172 (56.98%), Postives = 116/172 (67.44%), Query Frame = 1 

Query: 1   MSQEDKSAAVGVVV-HHHHESNSAHPH----------YGTFQGVANYPP--------VEF 60
           MS E+K  +  V++ H HH+ +  HP           YGTFQGVANYPP        + F
Sbjct: 1   MSDEEKGHSRAVIIDHQHHQYHHQHPQQSQPPPPPPQYGTFQGVANYPPPHPPQHPVIGF 60

Query: 61  PQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGF 120
           PQP  PPG S+         Y HGYQ VPGYA+ EGRPVRE  LPCCGIG+GWFLFIIGF
Sbjct: 61  PQPVPPPGASEPPA------YPHGYQTVPGYAVAEGRPVRERRLPCCGIGVGWFLFIIGF 120

Query: 121 FLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW 154
           FL AIPWY G  ++LC R+D REKPGYVAC+IAAV+AT+AI+ GAT+ AD W
Sbjct: 121 FLGAIPWYVGLFILLCARIDPREKPGYVACTIAAVLATIAIVLGATKGADDW 166

[Close]
BLAST of MELO3C016688 vs. TAIR10
Match: AT1G17080.1 (AT1G17080.1 Ribosomal protein L18ae family)

HSP 1 Score: 180.3 bits (456), Expect = 9.3e-46
Identity = 87/160 (54.37%), Postives = 109/160 (68.12%), Query Frame = 1 

Query: 3   QEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVE-------FPQPTRPPGLSDSDD 62
           +EDKS           E  + H  YGTFQGV+NYPP +       FPQP+ PPG+ DS  
Sbjct: 5   EEDKSKGFA------SEEGNQHHQYGTFQGVSNYPPPQNSAPVTGFPQPSAPPGVYDSGA 64

Query: 63  PSQYQHYAHGYQAVPGYA-IVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAIL 122
           P    +YAHGYQ VP +  + EGRPVR+  LPCCGIG+GWFLFI+GFFL AIPWY G  +
Sbjct: 65  P----YYAHGYQTVPVHGGVAEGRPVRQRRLPCCGIGLGWFLFIVGFFLGAIPWYVGLFI 124

Query: 123 ILCG-RVDYREKPGYVACSIAAVIATLAIIFGATREADVW 154
           ++ G R+DYREKPGY+AC+IAA++AT+A+I G ++ AD W
Sbjct: 125 MMFGRRIDYREKPGYIACTIAAILATIAVILGVSKGADDW 154

[Close]
BLAST of MELO3C016688 vs. TAIR10
Match: AT1G53560.1 (AT1G53560.1 Ribosomal protein L18ae family)

HSP 1 Score: 154.8 bits (390), Expect = 4.2e-38
Identity = 74/139 (53.24%), Postives = 89/139 (64.03%), Query Frame = 1 

Query: 27  YGTFQGVANYPPVEFP------------QPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAI 86
           YGTFQGV  YPP  +P            QP+ PPG S   D S +Q Y   +Q V GY +
Sbjct: 16  YGTFQGVPTYPPPSYPHPPSHHPVIGIPQPSPPPG-SPHHDISVHQ-YIQEHQTVAGYPV 75

Query: 87  VEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRVDYREKPGYVACSIA 146
            +GRP R+  LPCCG+G+GWFLFIIGF L AIPWY G  +++C R+D REKPGYVAC+IA
Sbjct: 76  SQGRPARQNRLPCCGLGLGWFLFIIGFLLGAIPWYVGVFILVCARIDPREKPGYVACTIA 135

Query: 147 AVIATLAIIFGATREADVW 154
           AV+AT+ I+FG      VW
Sbjct: 136 AVVATITIVFGVMGGRGVW 152

[Close]
BLAST of MELO3C016688 vs. TAIR10
Match: AT1G29970.2 (AT1G29970.2 60S ribosomal protein L18A-1)

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-27
Identity = 62/120 (51.67%), Postives = 74/120 (61.67%), Query Frame = 1 

Query: 26  HYGTFQGVANYP----PVEFPQPTRP----PG--LSDSDDPSQYQHYAHGYQAV-PGYAI 85
           +YGTFQGVAN+P    P +F QP  P    PG    +        +YA G+  V P Y +
Sbjct: 20  YYGTFQGVANFPTPTPPPQFMQPQHPITTFPGHAYQNLQGHGGGVNYAQGFPVVVPDYTV 79

Query: 86  VEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRVDYREKPGYVACSIA 135
           VE RP+ E  LPCCG+G+GWFLFI+GF    IPWY GA ++L   VD+REK GYVACSIA
Sbjct: 80  VEVRPMIEHELPCCGLGMGWFLFIMGFLFGGIPWYLGAFIVLVTSVDHREKAGYVACSIA 139

[Close]
BLAST of MELO3C016688 vs. TAIR10
Match: AT3G14595.1 (AT3G14595.1 Ribosomal protein L18ae family)

HSP 1 Score: 109.4 bits (272), Expect = 2.0e-24
Identity = 66/151 (43.71%), Postives = 82/151 (54.30%), Query Frame = 1 

Query: 4   EDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYA 63
           +DK+ +V  V  H H+     P    FQGV+NYPP + P  T          P   Q YA
Sbjct: 6   DDKNRSV--VTDHQHQQQPPPP----FQGVSNYPPQQQPPAT--------GYPQPAQPYA 65

Query: 64  HGYQAVPGYAIVEG-RPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRVDY 123
            GY       +V G RP       CCGIGIGW LFI+GFF A +PWY G  L+L  R + 
Sbjct: 66  QGY-------VVNGVRPTEHGR--CCGIGIGWVLFILGFFFA-LPWYIGFFLLLFSR-NP 125

Query: 124 REKPGYVACSIAAVIATLAIIFGATREADVW 154
           RE+PGY+AC++ AV AT+ +IFG  R + VW
Sbjct: 126 RERPGYIACAVGAVFATIIVIFGTVRGSGVW 131

[Close]
BLAST of MELO3C016688 vs. TAIR10
Match: AT1G54217.2 (AT1G54217.2 Ribosomal protein L18ae family)

HSP 1 Score: 53.1 bits (126), Expect = 1.7e-07
Identity = 27/62 (43.55%), Postives = 35/62 (56.45%), Query Frame = 1 

Query: 84  PLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCG--RVDYREKPGYVACSIAAVIATLA 143
           PLPC G GIGWF F++G F+    WY    L L      D RE+ G  A +IAA+I ++A
Sbjct: 32  PLPCFGFGIGWFSFLLG-FVFPFAWYVATFLYLISYYHRDPRERSGLAASAIAALIFSVA 91

[Close]
BLAST of MELO3C016688 vs. NCBI nr
Match: gi|659103035|ref|XP_008452440.1| (PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo])

HSP 1 Score: 329.3 bits (843), Expect = 3.5e-87
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQ 60
           MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQ
Sbjct: 1   MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQ 60

Query: 61  HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRV 120
           HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRV
Sbjct: 61  HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRV 120

Query: 121 DYREKPGYVACSIAAVIATLAIIFGATREADVW 154
           DYREKPGYVACSIAAVIATLAIIFGATREADVW
Sbjct: 121 DYREKPGYVACSIAAVIATLAIIFGATREADVW 153

[Close]
BLAST of MELO3C016688 vs. NCBI nr
Match: gi|449456534|ref|XP_004146004.1| (PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 7.1e-80
Identity = 141/153 (92.16%), Postives = 146/153 (95.42%), Query Frame = 1 

Query: 1   MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQ 60
           MS++DKSAAVGVVVHHHHESNS HPHYGTFQGVANYPPV F  PTR PG+ DSDDPSQYQ
Sbjct: 1   MSEQDKSAAVGVVVHHHHESNSPHPHYGTFQGVANYPPVGFSHPTRLPGVPDSDDPSQYQ 60

Query: 61  HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRV 120
           HYAHGYQAVPGYAIVEGRPVREP LPCCGIGIGWFLFIIGFFLAAIPWYAGAILI+CGRV
Sbjct: 61  HYAHGYQAVPGYAIVEGRPVREPRLPCCGIGIGWFLFIIGFFLAAIPWYAGAILIICGRV 120

Query: 121 DYREKPGYVACSIAAVIATLAIIFGATREADVW 154
           DYREKPGYVACSIAAVIAT+AIIFGATREADVW
Sbjct: 121 DYREKPGYVACSIAAVIATVAIIFGATREADVW 153

[Close]
BLAST of MELO3C016688 vs. NCBI nr
Match: gi|802546700|ref|XP_012086502.1| (PREDICTED: 60S ribosomal protein L18a-like protein [Jatropha curcas])

HSP 1 Score: 218.0 bits (554), Expect = 1.1e-53
Identity = 102/156 (65.38%), Postives = 118/156 (75.64%), Query Frame = 1 

Query: 1   MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPP---VEFPQPTRPPGLSDSDDPS 60
           MS+E+K  + GVVV HHH  N   P YGTFQGVANYP    + FPQP  PPG ++   P 
Sbjct: 1   MSEEEKGQSRGVVVDHHHHQNP-QPQYGTFQGVANYPQQPVIGFPQPVPPPGATEPSAPP 60

Query: 61  QYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILC 120
           QY  YAHGYQ VPGYA+ +GRPVRE  LPCCGIG+GWFLFIIGFFL AIPWY G  +ILC
Sbjct: 61  QY--YAHGYQTVPGYAVADGRPVREHRLPCCGIGLGWFLFIIGFFLGAIPWYVGLFIILC 120

Query: 121 GRVDYREKPGYVACSIAAVIATLAIIFGATREADVW 154
            R+D REKPGY+AC+IAAV+AT+AII G T+ AD W
Sbjct: 121 ARIDPREKPGYIACTIAAVLATVAIILGVTKGADDW 153

[Close]
BLAST of MELO3C016688 vs. NCBI nr
Match: gi|703085474|ref|XP_010092747.1| (60S ribosomal protein L18a-1 [Morus notabilis])

HSP 1 Score: 213.0 bits (541), Expect = 3.7e-52
Identity = 98/164 (59.76%), Postives = 123/164 (75.00%), Query Frame = 1 

Query: 1   MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPP---------VEFPQPTRPPGLS 60
           MS+E+      VV HHHH+ ++  P YGTFQGVANYPP         + FPQP  PPG++
Sbjct: 1   MSEENDKKPAIVVDHHHHQEHN-QPQYGTFQGVANYPPPRPPHHQPAIGFPQPVPPPGVA 60

Query: 61  DSDDPSQYQ--HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWY 120
           +   PS +   +YA GYQ VPGYA+ EGRPVRE  LPCCGIGIGWFLFIIGFFLA +PWY
Sbjct: 61  E---PSAHHPDYYARGYQTVPGYAVAEGRPVRERRLPCCGIGIGWFLFIIGFFLAGVPWY 120

Query: 121 AGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW 154
           AGA+++LC R+DYREKPGY+AC++AA++AT+AI+ G T+ AD W
Sbjct: 121 AGALILLCSRIDYREKPGYIACTVAAILATIAIVLGVTKGADDW 160

[Close]
BLAST of MELO3C016688 vs. NCBI nr
Match: gi|747071859|ref|XP_011082821.1| (PREDICTED: 60S ribosomal protein L18a-like protein [Sesamum indicum])

HSP 1 Score: 212.2 bits (539), Expect = 6.3e-52
Identity = 97/137 (70.80%), Postives = 110/137 (80.29%), Query Frame = 1 

Query: 15  HHHHESNSAHPHYGTFQGVANYPP---VEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPG 74
           HH+H  +   P YGTFQGVAN+PP   V FPQP  PPG+S    P Q Q+YAHGYQAVPG
Sbjct: 8   HHYHPEHPPPPAYGTFQGVANHPPPTAVGFPQPVPPPGISGVPPPPQSQYYAHGYQAVPG 67

Query: 75  YAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRVDYREKPGYVAC 134
           YA+ EGRP+RE  LPCCGIGIGWFLFIIGFFLAAIPWY G +L+LC R+D REKPGYVAC
Sbjct: 68  YAVAEGRPLRERRLPCCGIGIGWFLFIIGFFLAAIPWYVGVLLLLCSRIDPREKPGYVAC 127

Query: 135 SIAAVIATLAIIFGATR 149
           +IAAV+AT+A IFG TR
Sbjct: 128 TIAAVLATIAAIFGLTR 144

The following BLAST results are available for this feature:
BLAST of MELO3C016688 vs. Swiss-Prot
Match NameE-valueIdentityDescription
R18AL_ARATH8.0e-3148.2060S ribosomal protein L18a-like protein OS=Arabidopsis thaliana GN=At1g29970 PE=... [more]
BLAST of MELO3C016688 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1Y0_CUCSA5.0e-8092.16Uncharacterized protein OS=Cucumis sativus GN=Csa_4G621210 PE=4 SV=1[more]
A0A067LCW3_JATCU8.0e-5465.38Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20159 PE=4 SV=1[more]
W9QZI1_9ROSA2.6e-5259.7660S ribosomal protein L18a-1 OS=Morus notabilis GN=L484_024642 PE=4 SV=1[more]
A0A151S283_CAJCA5.3e-5060.6160S ribosomal protein L18a-1 OS=Cajanus cajan GN=KK1_029397 PE=4 SV=1[more]
B9SVW7_RICCO1.0e-4856.9860S ribosomal protein L18a, plant, putative OS=Ricinus communis GN=RCOM_0747380 ... [more]
BLAST of MELO3C016688 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G17080.19.3e-4654.38 Ribosomal protein L18ae family[more]
AT1G53560.14.2e-3853.24 Ribosomal protein L18ae family[more]
AT1G29970.21.5e-2751.67 60S ribosomal protein L18A-1[more]
AT3G14595.12.0e-2443.71 Ribosomal protein L18ae family[more]
AT1G54217.21.7e-0743.55 Ribosomal protein L18ae family[more]
BLAST of MELO3C016688 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659103035|ref|XP_008452440.1|3.5e-87100.00PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo][more]
gi|449456534|ref|XP_004146004.1|7.1e-8092.16PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis sativus][more]
gi|802546700|ref|XP_012086502.1|1.1e-5365.38PREDICTED: 60S ribosomal protein L18a-like protein [Jatropha curcas][more]
gi|703085474|ref|XP_010092747.1|3.7e-5259.7660S ribosomal protein L18a-1 [Morus notabilis][more]
gi|747071859|ref|XP_011082821.1|6.3e-5270.80PREDICTED: 60S ribosomal protein L18a-like protein [Sesamum indicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005840 ribosome
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU46878melon EST collection version 4.0transcribed_cluster
MU65468melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016688T1MELO3C016688T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU65468MU65468transcribed_cluster
MU46878MU46878transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR1005260S RIBOSOMAL PROTEIN L18Acoord: 62..153
score: 1.1
NoneNo IPR availablePANTHERPTHR10052:SF9SUBFAMILY NOT NAMEDcoord: 62..153
score: 1.1