MELO3C016195 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ACAAAACAAAAGCTAAAGCTAAAGGAATTGTATTTGGAGATTGGCAAATGGGTAGGGAGTTCAGTTTGGAGCTTGGTCTTTGGCCATCTGCTTCAGAACCAACCTTCCAGTTCTCTGCAATTCCCATGTGAGAGATAATTTCTTCTACTTCTTCTTTTCTACTTTCTTGTTTGTTTAAACATTCATGGAAAGTGGAATTTGGATTTTGTTGTTTATGAATGTAGGATGGCTTTGCCATTTACTTTGAATCATCATCAGCAGCAGCAACAGATCATGGTTTTCTATAATGGAGCACTTTCCCTCTGTGACTTCACTGAACTTCAGGTTGGTGATCAAATTAACCCTTTTTTTTTTTTTCCTCTATGTAACCAACAAGATGAGAATAAAATCGAAGAAGAAAAGTTTGATTGGATACCGGTCGTTTGAATTTGATATTGAAAAGGTTTTTAACCTAATCTTCATAACGTATTCAAACTTCTAGGACATTTAAGATGCAATGATGAATGTAGATATGAAGAACAAACTAATACTTCAACGTTTTGAGAGATTTGACGAATCTAACATTTTGTTTTACAATGTTTGCAGGCAAGAGCCATATTATGGATTGGAAGCCAAGAGAGAAGTAGAAATGTGAGATGTAGGAATCCAGAATGGTTGAATATGCAAATGTTGAAGAGTGGGAATGGGAATGGGAACGCAGGTTTCTCCATTAAGAAATCTCTGCAGAGATTCCTACAAAGGAGAAAGATGAGAAGAATTCGAACAATGTCTCCGTATCACAAACTGTAATGAACAAACCATTTATCCAATTCAAACAATGAATCAAACGCTTCTCATTTGCACCATGATTCCACAAACATTTTTGTATTGTTGAACAGAAATAAGACAAG ACAAAACAAAAGCTAAAGCTAAAGGAATTGTATTTGGAGATTGGCAAATGGGTAGGGAGTTCAGTTTGGAGCTTGGTCTTTGGCCATCTGCTTCAGAACCAACCTTCCAGTTCTCTGCAATTCCCATGATGGCTTTGCCATTTACTTTGAATCATCATCAGCAGCAGCAACAGATCATGGTTTTCTATAATGGAGCACTTTCCCTCTGTGACTTCACTGAACTTCAGGCAAGAGCCATATTATGGATTGGAAGCCAAGAGAGAAGTAGAAATGTGAGATGTAGGAATCCAGAATGGTTGAATATGCAAATGTTGAAGAGTGGGAATGGGAATGGGAACGCAGGTTTCTCCATTAAGAAATCTCTGCAGAGATTCCTACAAAGGAGAAAGATGAGAAGAATTCGAACAATGTCTCCGTATCACAAACTGTAATGAACAAACCATTTATCCAATTCAAACAATGAATCAAACGCTTCTCATTTGCACCATGATTCCACAAACATTTTTGTATTGTTGAACAGAAATAAGACAAG ATGGGTAGGGAGTTCAGTTTGGAGCTTGGTCTTTGGCCATCTGCTTCAGAACCAACCTTCCAGTTCTCTGCAATTCCCATGATGGCTTTGCCATTTACTTTGAATCATCATCAGCAGCAGCAACAGATCATGGTTTTCTATAATGGAGCACTTTCCCTCTGTGACTTCACTGAACTTCAGGCAAGAGCCATATTATGGATTGGAAGCCAAGAGAGAAGTAGAAATGTGAGATGTAGGAATCCAGAATGGTTGAATATGCAAATGTTGAAGAGTGGGAATGGGAATGGGAACGCAGGTTTCTCCATTAAGAAATCTCTGCAGAGATTCCTACAAAGGAGAAAGATGAGAAGAATTCGAACAATGTCTCCGTATCACAAACTGTAA MGREFSLELGLWPSASEPTFQFSAIPMMALPFTLNHHQQQQQIMVFYNGALSLCDFTELQARAILWIGSQERSRNVRCRNPEWLNMQMLKSGNGNGNAGFSIKKSLQRFLQRRKMRRIRTMSPYHKL*
BLAST of MELO3C016195 vs. Swiss-Prot
Match: TIF5A_ARATH (Protein TIFY 5A OS=Arabidopsis thaliana GN=TIFY5A PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.3e-07 Identity = 36/90 (40.00%), Postives = 48/90 (53.33%), Query Frame = 1
BLAST of MELO3C016195 vs. TrEMBL
Match: A0A0A0KXG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G062400 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 3.0e-62 Identity = 119/129 (92.25%), Postives = 124/129 (96.12%), Query Frame = 1
BLAST of MELO3C016195 vs. TrEMBL
Match: A0A0D2Q6C4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G092400 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 6.3e-12 Identity = 52/131 (39.69%), Postives = 72/131 (54.96%), Query Frame = 1
BLAST of MELO3C016195 vs. TrEMBL
Match: B9HDF1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s02410g PE=4 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 1.4e-11 Identity = 52/137 (37.96%), Postives = 75/137 (54.74%), Query Frame = 1
BLAST of MELO3C016195 vs. TrEMBL
Match: I3WTA7_NICAT (Jasmonate ZIM domain protein j OS=Nicotiana attenuata PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 3.1e-11 Identity = 48/137 (35.04%), Postives = 77/137 (56.20%), Query Frame = 1
BLAST of MELO3C016195 vs. TrEMBL
Match: A5AT04_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g03790 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 6.9e-11 Identity = 42/89 (47.19%), Postives = 54/89 (60.67%), Query Frame = 1
BLAST of MELO3C016195 vs. TAIR10
Match: AT1G30135.1 (AT1G30135.1 jasmonate-zim-domain protein 8) HSP 1 Score: 57.4 bits (137), Expect = 7.6e-09 Identity = 36/90 (40.00%), Postives = 48/90 (53.33%), Query Frame = 1
BLAST of MELO3C016195 vs. NCBI nr
Match: gi|659101894|ref|XP_008451847.1| (PREDICTED: protein TIFY 5A-like [Cucumis melo]) HSP 1 Score: 263.1 bits (671), Expect = 2.6e-67 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
BLAST of MELO3C016195 vs. NCBI nr
Match: gi|449460082|ref|XP_004147775.1| (PREDICTED: protein TIFY 5A-like [Cucumis sativus]) HSP 1 Score: 245.7 bits (626), Expect = 4.3e-62 Identity = 119/129 (92.25%), Postives = 124/129 (96.12%), Query Frame = 1
BLAST of MELO3C016195 vs. NCBI nr
Match: gi|823171389|ref|XP_012484787.1| (PREDICTED: protein TIFY 5A-like [Gossypium raimondii]) HSP 1 Score: 78.6 bits (192), Expect = 9.0e-12 Identity = 52/131 (39.69%), Postives = 72/131 (54.96%), Query Frame = 1
BLAST of MELO3C016195 vs. NCBI nr
Match: gi|566174097|ref|XP_002307919.2| (hypothetical protein POPTR_0006s02410g [Populus trichocarpa]) HSP 1 Score: 77.4 bits (189), Expect = 2.0e-11 Identity = 52/137 (37.96%), Postives = 75/137 (54.74%), Query Frame = 1
BLAST of MELO3C016195 vs. NCBI nr
Match: gi|659078241|ref|XP_008439622.1| (PREDICTED: protein TIFY 5A [Cucumis melo]) HSP 1 Score: 77.4 bits (189), Expect = 2.0e-11 Identity = 49/125 (39.20%), Postives = 69/125 (55.20%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |