Cucsa.179960 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTAAAGGAATTGTATTTAGAGATTGGCAAATGGGAAGGGAGTTCAGTTTGGAGCTTGGTCTTTGGCCATCTTCTTCTGCTTCAGAATCAACCTTCCAATTCTCTGCAATTCCCATGTGAGAGATAATTTCTTCTTCTTCTTCCTCTTTTTGATTTTCTTGTTTGTTTAAACATTCATGGAAAGTGGAATTTGGATTTTGGTGTTTATGAATGTAGGATGACTTTGCCATTTACTTTGAGCCATCATCAGCAGCAGCAACAGATCATGGTTTTCTATAATGGAGCACTTTCCATCTGTGACTTCACTGAACTTCAGGTTGGTATTCAAATTAACCTTTTTtCCCCTATGCAACCGAAAAGATGAGATGAGAATAGAATCCACGAAGAAAAGTTTGATTGGATACTGTTCGTTTGAATTTGATAATGAAACGGTTTTTAACCTAATCTTCATAATGTATTCAAAATTCTAGGACATTTAATATGCAATGATGATTGTAGATATGAAGAATATACTAATACTTCAACGTTTGGAGAGATTTAATGAATTTAACATTATATTTTACAACGTTTGCAGGCAAGAGCCATAATATGGGTTGGAAGCCAAGAGAGAAGTGGAAATGTGAGATGTAGGAACCCAGAATGGTTGAATATGCAAATGTTAAAGAGTGGGAATGGGAATGGGAATGCAGGTTTCTCCATTAAGAAATCTCTGCAGAAATTCTTACAAAGGAGAAAGATGAGAAGAATTCGAACAATGTCTCCATATCACAAACTGTAATGAACAAAACCATTGATCCAATTCAAACGATGAATCAAACAGTTCTCAATTGCACTATGATTCTACAAACATTTTTGTATTGTTGAACGAAATAAGACAAGAAAAAGTTCCTACAAGAAAAGAATTTGTTTGTTCCTGTATTTTACACAACCCCAA GCTAAAGGAATTGTATTTAGAGATTGGCAAATGGGAAGGGAGTTCAGTTTGGAGCTTGGTCTTTGGCCATCTTCTTCTGCTTCAGAATCAACCTTCCAATTCTCTGCAATTCCCATGATGACTTTGCCATTTACTTTGAGCCATCATCAGCAGCAGCAACAGATCATGGTTTTCTATAATGGAGCACTTTCCATCTGTGACTTCACTGAACTTCAGGCAAGAGCCATAATATGGGTTGGAAGCCAAGAGAGAAGTGGAAATGTGAGATGTAGGAACCCAGAATGGTTGAATATGCAAATGTTAAAGAGTGGGAATGGGAATGGGAATGCAGGTTTCTCCATTAAGAAATCTCTGCAGAAATTCTTACAAAGGAGAAAGATGAGAAGAATTCGAACAATGTCTCCATATCACAAACTGTAATGAACAAAACCATTGATCCAATTCAAACGATGAATCAAACAGTTCTCAATTGCACTATGATTCTACAAACATTTTTGTATTGTTGAACGAAATAAGACAAGAAAAAGTTCCTACAAGAAAAGAATTTGTTTGTTCCTGTATTTTACACAACCCCAA ATGGGAAGGGAGTTCAGTTTGGAGCTTGGTCTTTGGCCATCTTCTTCTGCTTCAGAATCAACCTTCCAATTCTCTGCAATTCCCATGATGACTTTGCCATTTACTTTGAGCCATCATCAGCAGCAGCAACAGATCATGGTTTTCTATAATGGAGCACTTTCCATCTGTGACTTCACTGAACTTCAGGCAAGAGCCATAATATGGGTTGGAAGCCAAGAGAGAAGTGGAAATGTGAGATGTAGGAACCCAGAATGGTTGAATATGCAAATGTTAAAGAGTGGGAATGGGAATGGGAATGCAGGTTTCTCCATTAAGAAATCTCTGCAGAAATTCTTACAAAGGAGAAAGATGAGAAGAATTCGAACAATGTCTCCATATCACAAACTGTAA MGREFSLELGLWPSSSASESTFQFSAIPMMTLPFTLSHHQQQQQIMVFYNGALSICDFTELQARAIIWVGSQERSGNVRCRNPEWLNMQMLKSGNGNGNAGFSIKKSLQKFLQRRKMRRIRTMSPYHKL*
BLAST of Cucsa.179960 vs. Swiss-Prot
Match: TIF5A_ARATH (Protein TIFY 5A OS=Arabidopsis thaliana GN=TIFY5A PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09 Identity = 46/122 (37.70%), Postives = 65/122 (53.28%), Query Frame = 1
BLAST of Cucsa.179960 vs. TrEMBL
Match: A0A0A0KXG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G062400 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 4.8e-68 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1
BLAST of Cucsa.179960 vs. TrEMBL
Match: A5AT04_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g03790 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.1e-11 Identity = 49/126 (38.89%), Postives = 68/126 (53.97%), Query Frame = 1
BLAST of Cucsa.179960 vs. TrEMBL
Match: B9HDF1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s02410g PE=4 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 1.9e-11 Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 1
BLAST of Cucsa.179960 vs. TrEMBL
Match: A0A0A0KI51_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G523460 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 5.4e-11 Identity = 47/127 (37.01%), Postives = 67/127 (52.76%), Query Frame = 1
BLAST of Cucsa.179960 vs. TrEMBL
Match: A0A067GS33_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g046141mg PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 7.0e-11 Identity = 54/130 (41.54%), Postives = 73/130 (56.15%), Query Frame = 1
BLAST of Cucsa.179960 vs. TAIR10
Match: AT1G30135.1 (AT1G30135.1 jasmonate-zim-domain protein 8) HSP 1 Score: 63.9 bits (154), Expect = 8.2e-11 Identity = 46/122 (37.70%), Postives = 65/122 (53.28%), Query Frame = 1
BLAST of Cucsa.179960 vs. NCBI nr
Match: gi|449460082|ref|XP_004147775.1| (PREDICTED: protein TIFY 5A-like [Cucumis sativus]) HSP 1 Score: 265.0 bits (676), Expect = 6.9e-68 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1
BLAST of Cucsa.179960 vs. NCBI nr
Match: gi|659101894|ref|XP_008451847.1| (PREDICTED: protein TIFY 5A-like [Cucumis melo]) HSP 1 Score: 245.7 bits (626), Expect = 4.3e-62 Identity = 119/129 (92.25%), Postives = 124/129 (96.12%), Query Frame = 1
BLAST of Cucsa.179960 vs. NCBI nr
Match: gi|225443888|ref|XP_002277769.1| (PREDICTED: protein TIFY 5A [Vitis vinifera]) HSP 1 Score: 77.8 bits (190), Expect = 1.6e-11 Identity = 49/126 (38.89%), Postives = 68/126 (53.97%), Query Frame = 1
BLAST of Cucsa.179960 vs. NCBI nr
Match: gi|659078241|ref|XP_008439622.1| (PREDICTED: protein TIFY 5A [Cucumis melo]) HSP 1 Score: 77.4 bits (189), Expect = 2.0e-11 Identity = 51/128 (39.84%), Postives = 73/128 (57.03%), Query Frame = 1
BLAST of Cucsa.179960 vs. NCBI nr
Match: gi|566174097|ref|XP_002307919.2| (hypothetical protein POPTR_0006s02410g [Populus trichocarpa]) HSP 1 Score: 77.0 bits (188), Expect = 2.7e-11 Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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