MELO3C015999.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C015999.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	60S ribosomal protein L22-2
Location	chr01 : 32380349 .. 32381957 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGATAGTTTTACAAATTCGAAGTGAAATGAGTTATTTCTGCTTAAAGAAAACAAATCTCCTTCGTGCTTTAAAACACAAACTCAAAACCCTAAATTCAGCGCCGATTCTTCAATACATCTCTGCAGGAAGTTAGGGCAAAGCAGAAGCAAAAATGAGCCGTGGAGCAGCCGCATCCGGTGGCCCCAAGGGGAAGAAGAAGGGTGTGACCTTCGTTATCGATTGCGCGAAGCCAGTTGAGGACAAGATCATGGACATCGCCTCATTGGAGAAATTTCTTCTCGAGAGGATCAAGGTCGGCGGTAAAGCTGGAGCACTTGGTGACTCTGTTACTGTCACTAGGGACAAGAACAAGATCACCGTCAACTCCGACAGCAATTTCTCCAAGAGGTACCCTTTGTTTTGTATTTGGTAATTCTTGTATATTTTGGATGTGTTTTGTTGGTGCGCTTGTATATTGGGCTGGGAATACGCGTTGGAGTAATCTGGTAGCTGCAGCAATAGTGATGAGAATACAAGCTTTGTGCGGATTGATTTTGTTTACTGTGATTTTGTTGGAAACTTGTTGCATACTGTATTGGATTGTGGAATTGATGAGCATTACAGGGATGTATTCGACTAATTGATCCGATATTTCGGCCATGATTTAGTGTAAACGGGAATGTTACTTCTTGAAGAAGTGTTGTTGATTGCGAGTGCATTCTGATTTCTGGGTCATTTTTGTTTTTATCGATGTTGAAGTTCTTGGATCTATAAGCTTTGGGTATATTGTGTAGTCAGGTGGATTAACGCCATGTCTTTATTTGTGGAATTCACATATGATCTATTGTAAAACATGGATTCGTTAAGGATGTTACTTGTCTGCTTATGATTTCTCAGTTAGCTAACTTTTGTAGTTGTTACACTATATATCCATTTTCCTTTTTTTTTTTTAAAAGCCCTTTCGTTTTATAGATGAACTTAGTATTCTATGTGTGAGTTTTGAACGATGGGAGGCGATGTTGCTCTTTAACTTATGATTGTTTTGTTGGAAAATTTGCCTGTAAACTCCTATTTAGCTTTGTTGATGGTTCTCTCTTTTGAATTTCAGGTATCTCAAATATTTGACTAAGAAGTATTTGAAGAAACACAATGTTAGAGATTGGCTTCGGGTTATTGCTTCGAACAAGGACCGCAATGTCTATGAATTGAGATACTTCAACATTGCCGAGAATGAGGGTGAGGAAGAAGACTGAAGTTGAAGTCTTTATATTTTGGAAGCATTGTTTGCAGTAGGATTAGCTATATTTCCATACCTTATCTCGAAGCGTTTTCCATATAGAACATATAGCAAGGGGATTGCCTGAGTTCTGAGATGATGCAACTCTTGTTTATTTCTGAAGTTTTAATATCTATAAGTTTTGCTCTCGTAGCTCTCTTCTTTTGCTTGATTTGAAGATAATTTTCTTACTATGAGAGTATTGGTCAGTTTGTACTTTGTTTGAGGAATTGGAATTGGCAGTTCTTCTGAGAAAGTTGAAACTGTCTGGTACTGTTTGCGGAAGAGTTTGCAAACCTAATGGTTTACTTCAATGGAGGACATCAAATAAACTTAAATTCTTGAGAAAGAA

mRNA sequence

AGGATAGTTTTACAAATTCGAAGTGAAATGAGTTATTTCTGCTTAAAGAAAACAAATCTCCTTCGTGCTTTAAAACACAAACTCAAAACCCTAAATTCAGCGCCGATTCTTCAATACATCTCTGCAGGAAGTTAGGGCAAAGCAGAAGCAAAAATGAGCCGTGGAGCAGCCGCATCCGGTGGCCCCAAGGGGAAGAAGAAGGGTGTGACCTTCGTTATCGATTGCGCGAAGCCAGTTGAGGACAAGATCATGGACATCGCCTCATTGGAGAAATTTCTTCTCGAGAGGATCAAGGTCGGCGGTAAAGCTGGAGCACTTGGTGACTCTGTTACTGTCACTAGGGACAAGAACAAGATCACCGTCAACTCCGACAGCAATTTCTCCAAGAGGTATCTCAAATATTTGACTAAGAAGTATTTGAAGAAACACAATGTTAGAGATTGGCTTCGGGTTATTGCTTCGAACAAGGACCGCAATGTCTATGAATTGAGATACTTCAACATTGCCGAGAATGAGGGTGAGGAAGAAGACTGAAGTTGAAGTCTTTATATTTTGGAAGCATTGTTTGCAGTAGGATTAGCTATATTTCCATACCTTATCTCGAAGCGTTTTCCATATAGAACATATAGCAAGGGGATTGCCTGAGTTCTGAGATGATGCAACTCTTGTTTATTTCTGAAGTTTTAATATCTATAAGTTTTGCTCTCGTAGCTCTCTTCTTTTGCTTGATTTGAAGATAATTTTCTTACTATGAGAGTATTGGTCAGTTTGTACTTTGTTTGAGGAATTGGAATTGGCAGTTCTTCTGAGAAAGTTGAAACTGTCTGGTACTGTTTGCGGAAGAGTTTGCAAACCTAATGGTTTACTTCAATGGAGGACATCAAATAAACTTAAATTCTTGAGAAAGAA

Coding sequence (CDS)

ATGAGCCGTGGAGCAGCCGCATCCGGTGGCCCCAAGGGGAAGAAGAAGGGTGTGACCTTCGTTATCGATTGCGCGAAGCCAGTTGAGGACAAGATCATGGACATCGCCTCATTGGAGAAATTTCTTCTCGAGAGGATCAAGGTCGGCGGTAAAGCTGGAGCACTTGGTGACTCTGTTACTGTCACTAGGGACAAGAACAAGATCACCGTCAACTCCGACAGCAATTTCTCCAAGAGGTATCTCAAATATTTGACTAAGAAGTATTTGAAGAAACACAATGTTAGAGATTGGCTTCGGGTTATTGCTTCGAACAAGGACCGCAATGTCTATGAATTGAGATACTTCAACATTGCCGAGAATGAGGGTGAGGAAGAAGACTGA

Protein sequence

MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED

Homology

[Close]

BLAST of MELO3C015999.2 vs. NCBI nr
Match: XP_004136027.1 (PREDICTED: 60S ribosomal protein L22-2 [Cucumis sativus] >XP_008451565.1 PREDICTED: 60S ribosomal protein L22-2 [Cucumis melo] >XP_022155135.1 60S ribosomal protein L22-2 [Momordica charantia] >KGN44943.1 hypothetical protein Csa_7G397560 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 8.2e-62
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MELO3C015999.2 vs. NCBI nr
Match: XP_023548993.1 (60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244.6 bits (623), Expect = 1.8e-61
Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MELO3C015999.2 vs. NCBI nr
Match: XP_022960081.1 (60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_023004692.1 60S ribosomal protein L22-2-like [Cucurbita maxima])

HSP 1 Score: 243.4 bits (620), Expect = 4.0e-61
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKG TFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGSTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MELO3C015999.2 vs. NCBI nr
Match: XP_022991268.1 (60S ribosomal protein L22-2-like [Cucurbita maxima])

HSP 1 Score: 243.4 bits (620), Expect = 4.0e-61
Identity = 124/126 (98.41%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYEL+YFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELKYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MELO3C015999.2 vs. NCBI nr
Match: XP_022953729.1 (60S ribosomal protein L22-2-like [Cucurbita moschata])

HSP 1 Score: 241.1 bits (614), Expect = 2.0e-60
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASG PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VT
Sbjct: 1   MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MELO3C015999.2 vs. TAIR10
Match: AT3G05560.1 (Ribosomal L22e protein family)

HSP 1 Score: 207.2 bits (526), Expect = 5.8e-54
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT
Sbjct: 1   MSRGGAAVA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of MELO3C015999.2 vs. TAIR10
Match: AT5G27770.1 (Ribosomal L22e protein family)

HSP 1 Score: 203.8 bits (517), Expect = 6.4e-53
Identity = 104/126 (82.54%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV+
Sbjct: 1   MSRGNAAAA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVS 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 121 EGEEED 127
           E EEED
Sbjct: 121 EAEEED 124

[Close]

BLAST of MELO3C015999.2 vs. TAIR10
Match: AT1G02830.1 (Ribosomal L22e protein family)

HSP 1 Score: 170.2 bits (430), Expect = 7.9e-43
Identity = 87/126 (69.05%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           M+R  A S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV+
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRVIASNKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 121 EGEEED 127
               E+
Sbjct: 121 VASYEE 126

[Close]

BLAST of MELO3C015999.2 vs. Swiss-Prot
Match: sp|Q9M9W1|RL222_ARATH (60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-52
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT
Sbjct: 1   MSRGGAAVA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of MELO3C015999.2 vs. Swiss-Prot
Match: sp|Q9FE58|RL223_ARATH (60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.2e-51
Identity = 104/126 (82.54%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV+
Sbjct: 1   MSRGNAAAA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVS 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 121 EGEEED 127
           E EEED
Sbjct: 121 EAEEED 124

[Close]

BLAST of MELO3C015999.2 vs. Swiss-Prot
Match: sp|Q9SRX7|RL221_ARATH (Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.4e-41
Identity = 87/126 (69.05%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           M+R  A S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV+
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRVIASNKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 121 EGEEED 127
               E+
Sbjct: 121 VASYEE 126

[Close]

BLAST of MELO3C015999.2 vs. Swiss-Prot
Match: sp|P13732|RL22_TRIGR (60S ribosomal protein L22 OS=Tripneustes gratilla OX=7673 GN=RPL22 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 8.7e-31
Identity = 71/124 (57.26%), Postives = 91/124 (73.39%), Query Frame = 0


Query: 3   RGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVT 62
           +G   SG  K KK+ + F IDC  PVED IMD ++ E+FL ERIKV GK   L  ++ + 
Sbjct: 8   KGGRPSGKGKKKKQTLKFTIDCTLPVEDGIMDASNFEQFLQERIKVNGKTKNLTTNIVIE 67

Query: 63  RDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEG 122
           R K+K+TV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A+NK+   YELRYF I +++ 
Sbjct: 68  RKKSKVTVTSEIAFSKRYLKYLTKKYLKKNNLRDWLRVVAANKES--YELRYFQINQDDE 127

Query: 123 EEED 127
           EEED
Sbjct: 128 EEED 129

[Close]

BLAST of MELO3C015999.2 vs. Swiss-Prot
Match: sp|P47198|RL22_RAT (60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-30
Identity = 73/116 (62.93%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 7   ASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDK 66
           A GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT+ R K
Sbjct: 9   AKGGKK-KKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSK 68

Query: 67  NKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENE 122
           +KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+   YELRYF I ++E
Sbjct: 69  SKITVTSEEPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDE 121

[Close]

BLAST of MELO3C015999.2 vs. TrEMBL
Match: tr|A0A1S3BRQ9|A0A1S3BRQ9_CUCME (60S ribosomal protein L22-2 OS=Cucumis melo OX=3656 GN=LOC103492808 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.4e-62
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MELO3C015999.2 vs. TrEMBL
Match: tr|A0A0A0K637|A0A0A0K637_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397560 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.4e-62
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MELO3C015999.2 vs. TrEMBL
Match: tr|A0A1S3BQA5|A0A1S3BQA5_CUCME (60S ribosomal protein L22-2 OS=Cucumis melo OX=3656 GN=LOC103492158 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.3e-55
Identity = 116/126 (92.06%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AA  GPKGKKKGVTF IDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDSV+
Sbjct: 1   MSRGGAA--GPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVS 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+K+KITV SDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRNVYELRYFNIAEN
Sbjct: 61  VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of MELO3C015999.2 vs. TrEMBL
Match: tr|A0A1U8ABQ4|A0A1U8ABQ4_NELNU (60S ribosomal protein L22-2 OS=Nelumbo nucifera OX=4432 GN=LOC104598935 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.7e-55
Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG+A   GPKGKKKGVTF IDCAKPVEDKIMDIASLEKFL ERIKVGGKAGALGDS+T
Sbjct: 1   MSRGSAT--GPKGKKKGVTFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSIT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           V RDK+KITV SDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VARDKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of MELO3C015999.2 vs. TrEMBL
Match: tr|A0A0K9RHM6|A0A0K9RHM6_SPIOL (Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_065570 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.7e-55
Identity = 117/126 (92.86%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAA GG KGKKKG +F IDCAKPVEDKIMDIASLEKFL ERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAA-GGAKGKKKGASFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNK+RNVYELRYFNIAEN
Sbjct: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKERNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           E EEED
Sbjct: 121 EAEEED 125

The following BLAST results are available for this feature:

BLAST of MELO3C015999.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136027.1	8.2e-62	100.00	PREDICTED: 60S ribosomal protein L22-2 [Cucumis sativus] >XP_008451565.1 PREDICT...	[more]
XP_023548993.1	1.8e-61	99.21	60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022960081.1	4.0e-61	99.21	60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_023004692.1 60S riboso...	[more]
XP_022991268.1	4.0e-61	98.41	60S ribosomal protein L22-2-like [Cucurbita maxima]	[more]
XP_022953729.1	2.0e-60	98.41	60S ribosomal protein L22-2-like [Cucurbita moschata]	[more]

BLAST of MELO3C015999.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05560.1	5.8e-54	84.13	Ribosomal L22e protein family	[more]
AT5G27770.1	6.4e-53	82.54	Ribosomal L22e protein family	[more]
AT1G02830.1	7.9e-43	69.05	Ribosomal L22e protein family	[more]

BLAST of MELO3C015999.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M9W1\|RL222_ARATH	1.1e-52	84.13	60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1	[more]
sp\|Q9FE58\|RL223_ARATH	1.2e-51	82.54	60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1	[more]
sp\|Q9SRX7\|RL221_ARATH	1.4e-41	69.05	Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A P...	[more]
sp\|P13732\|RL22_TRIGR	8.7e-31	57.26	60S ribosomal protein L22 OS=Tripneustes gratilla OX=7673 GN=RPL22 PE=2 SV=1	[more]
sp\|P47198\|RL22_RAT	1.9e-30	62.93	60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2	[more]

BLAST of MELO3C015999.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BRQ9\|A0A1S3BRQ9_CUCME	5.4e-62	100.00	60S ribosomal protein L22-2 OS=Cucumis melo OX=3656 GN=LOC103492808 PE=4 SV=1	[more]
tr\|A0A0A0K637\|A0A0A0K637_CUCSA	5.4e-62	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397560 PE=4 SV=1	[more]
tr\|A0A1S3BQA5\|A0A1S3BQA5_CUCME	1.3e-55	92.06	60S ribosomal protein L22-2 OS=Cucumis melo OX=3656 GN=LOC103492158 PE=4 SV=1	[more]
tr\|A0A1U8ABQ4\|A0A1U8ABQ4_NELNU	1.7e-55	92.06	60S ribosomal protein L22-2 OS=Nelumbo nucifera OX=4432 GN=LOC104598935 PE=4 SV=...	[more]
tr\|A0A0K9RHM6\|A0A0K9RHM6_SPIOL	1.7e-55	92.86	Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_065570 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR038526	Ribosomal_L22e_sf
IPR002671	Ribosomal_L22e

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0002181	cytoplasmic translation
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015999.2.1	MELO3C015999.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002671	Ribosomal protein L22e	PFAM	PF01776	Ribosomal_L22e	coord: 16..124 e-value: 3.0E-46 score: 156.2
IPR002671	Ribosomal protein L22e	PANTHER	PTHR10064	60S RIBOSOMAL PROTEIN L22	coord: 1..126
IPR038526	Ribosomal protein L22e superfamily	GENE3D	G3DSA:3.30.1360.210		coord: 7..126 e-value: 2.1E-51 score: 174.9
None	No IPR available	PANTHER	PTHR10064:SF5	SUBFAMILY NOT NAMED	coord: 1..126

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C015999.2	Csa7G397560	Cucumber (Chinese Long) v2	cumedB511
MELO3C015999.2	CSPI07G17500	Wild cucumber (PI 183967)	cpimedB525
MELO3C015999.2	Cucsa.205550	Cucumber (Gy14) v1	cgymedB368
MELO3C015999.2	CmaCh08G004250	Cucurbita maxima (Rimu)	cmamedB930
MELO3C015999.2	CmaCh17G010850	Cucurbita maxima (Rimu)	cmamedB373
MELO3C015999.2	CmoCh08G004190	Cucurbita moschata (Rifu)	cmomedB920
MELO3C015999.2	CmoCh17G010600	Cucurbita moschata (Rifu)	cmomedB359
MELO3C015999.2	Lsi02G024070	Bottle gourd (USVL1VR-Ls)	lsimedB201
MELO3C015999.2	Cp4.1LG17g06990	Cucurbita pepo (Zucchini)	cpemedB341
MELO3C015999.2	Cp4.1LG12g05660	Cucurbita pepo (Zucchini)	cpemedB145
MELO3C015999.2	Cla015071	Watermelon (97103) v1	medwmB181
MELO3C015999.2	ClCG09G005850	Watermelon (Charleston Gray)	medwcgB155
MELO3C015999.2	Cla97C09G168350	Watermelon (97103) v2	medwmbB194
MELO3C015999.2	Bhi09G000719	Wax gourd	medwgoB255
MELO3C015999.2	CsaV3_7G029290	Cucumber (Chinese Long) v3	cucmedB538

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C015999.2	Cucumber (Gy14) v2	cgybmedB467
MELO3C015999.2	Silver-seed gourd	carmedB0112
MELO3C015999.2	Silver-seed gourd	carmedB0572