Cla015071 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla015071
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	60S ribosomal protein L22-2 (AHRD V1 ***- D7L3W0_ARALL); contains Interpro domain(s) IPR002671 Ribosomal protein L22e
Location	Chr9 : 4563979 .. 4565039 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCGTGGAGCAGCCGCATCCGGTGGCCCGAAGGGGAAGAAGAAGGGCGTGACCTTCGTCATCGATTGTGCGAAGCCAGTCGAGGACAAGATCATGGACATCGCCTCGTTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTTGGCGGTAAAGCTGGCGCACTTGGTGACTCGGTTACCGTCACTCGAGACAAGAACAAGATCACCGTCAACTCCGATAGCAATTTCTCCAAGAGGTACCCGTTATTTTGTATTTGGTAATAATTGTTGTATATTCTGGATGAGTTTTCTTCGTGCGCTTGTTGATTTGGCTGGGTATAAGCGTTGGATTACTCTGCTAGCTGCGGCAGTAGTACTGAAATACAAGCATTGTGCCGATCGATCTTTGTTTTCTGTGATTTCGTTGTAAATTTGTTGCATATTGTATTGGATTGTGGAATTGGTCAACATTATTGGGATTTATTGTACGAATTGATCTGAGATTTCAGCCATGTTTTAGTGTAAACGGGAAAGTTACTTCTTCAAGAAGTACTCGTTTATCTCATACTAGTTCTTCCTCTTCGTGTTGTTGATTTCGAGTGCATTCTGATTTCTGGGTCATTTTTATTTTATCGTTTGTGAAGTTCTTAAATGTCCTTATTTGGAATACACCTCTGATCTATTGTAATCGAGGGACTCGTTAAGGATTTTACTTGTCTGCTTATGCATTTCTCAATTAACCACCTTTTGTAGTTGTAACGCTTTATGTATCCTTTATATTTTTATGGTTCCATTTTCTGGACGAACTTAGAATTATATGTGTGGGTTCTGAAAGAAGGAAGGCGATCTTGCTCTTTAAGTTATGACTGTTTTGTTGGAGAATACGCTCGTAAACTCCTAATCAACTTTGTTGATGGTTCTCTCTGTTGAATTCCAGGTATCTCAAATACTTGACTAAGAAGTATTTGAAGAAACACAACGTTAGAGATTGGCTTCGGGTTATTGCTTCAAACAAGGATCGAAATGTCTATGAATTGAGATACTTCAATATTGCCGAGAACGAGGGTGAGGAAGAAGACTGA

mRNA sequence

ATGAGCCGTGGAGCAGCCGCATCCGGTGGCCCGAAGGGGAAGAAGAAGGGCGTGACCTTCGTCATCGATTGTGCGAAGCCAGTCGAGGACAAGATCATGGACATCGCCTCGTTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTTGGCGGTAAAGCTGGCGCACTTGGTGACTCGGTTACCGTCACTCGAGACAAGAACAAGATCACCGTCAACTCCGATAGCAATTTCTCCAAGAGGTATCTCAAATACTTGACTAAGAAGTATTTGAAGAAACACAACGTTAGAGATTGGCTTCGGGTTATTGCTTCAAACAAGGATCGAAATGTCTATGAATTGAGATACTTCAATATTGCCGAGAACGAGGGTGAGGAAGAAGACTGA

Coding sequence (CDS)

ATGAGCCGTGGAGCAGCCGCATCCGGTGGCCCGAAGGGGAAGAAGAAGGGCGTGACCTTCGTCATCGATTGTGCGAAGCCAGTCGAGGACAAGATCATGGACATCGCCTCGTTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTTGGCGGTAAAGCTGGCGCACTTGGTGACTCGGTTACCGTCACTCGAGACAAGAACAAGATCACCGTCAACTCCGATAGCAATTTCTCCAAGAGGTATCTCAAATACTTGACTAAGAAGTATTTGAAGAAACACAACGTTAGAGATTGGCTTCGGGTTATTGCTTCAAACAAGGATCGAAATGTCTATGAATTGAGATACTTCAATATTGCCGAGAACGAGGGTGAGGAAGAAGACTGA

Protein sequence

MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED

Homology

[Close]

BLAST of Cla015071 vs. Swiss-Prot
Match: RL222_ARATH (60S ribosomal protein L22-2 OS=Arabidopsis thaliana GN=RPL22B PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 8.5e-55
Identity = 106/126 (84.13%), Postives = 114/126 (90.48%), Query Frame = 1


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT
Sbjct: 1   MSRGGAAVA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of Cla015071 vs. Swiss-Prot
Match: RL223_ARATH (60S ribosomal protein L22-3 OS=Arabidopsis thaliana GN=RPL22C PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 9.4e-54
Identity = 104/126 (82.54%), Postives = 114/126 (90.48%), Query Frame = 1


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV+
Sbjct: 1   MSRGNAAAA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVS 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 121 EGEEED 127
           E EEED
Sbjct: 121 EAEEED 124

[Close]

BLAST of Cla015071 vs. Swiss-Prot
Match: RL221_ARATH (Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana GN=RPL22A PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 8.8e-44
Identity = 87/126 (69.05%), Postives = 103/126 (81.75%), Query Frame = 1


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           M+R  A S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV+
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRVIASNKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 121 EGEEED 127
               E+
Sbjct: 121 VASYEE 126

[Close]

BLAST of Cla015071 vs. Swiss-Prot
Match: RL22_RAT (60S ribosomal protein L22 OS=Rattus norvegicus GN=Rpl22 PE=2 SV=2)

HSP 1 Score: 145.2 bits (365), Expect = 4.8e-34
Identity = 77/121 (63.64%), Postives = 91/121 (75.21%), Query Frame = 1


Query: 7   ASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSV-TVTRDK 66
           A GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG  V T+ R K
Sbjct: 9   AKGGKK-KKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSK 68

Query: 67  NKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEE 126
           +KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+   YELRYF I ++E EEE
Sbjct: 69  SKITVTSEEPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEE 126

[Close]

BLAST of Cla015071 vs. Swiss-Prot
Match: RL22_CHICK (60S ribosomal protein L22 OS=Gallus gallus GN=RPL22 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 8.2e-34
Identity = 77/122 (63.11%), Postives = 92/122 (75.41%), Query Frame = 1


Query: 6   AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSV-TVTRD 65
           AA GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG  V T+ R 
Sbjct: 8   AAKGGKK-KKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERS 67

Query: 66  KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEE 125
           K+KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+   YELRYF I ++E EE
Sbjct: 68  KSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEE 126

Query: 126 ED 127
           E+
Sbjct: 128 EE 126

[Close]

BLAST of Cla015071 vs. TrEMBL
Match: A0A0A0K637_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397560 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.8e-64
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Cla015071 vs. TrEMBL
Match: A0A067JW95_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13938 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 7.4e-58
Identity = 117/126 (92.86%), Postives = 120/126 (95.24%), Query Frame = 1


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAA  G KGKKKG TFVIDCAKPVEDKIMDIASLEKFL ERIKVGGKAGALGDS+T
Sbjct: 1   MSRGAAA--GAKGKKKGATFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSIT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+K+KITV SDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of Cla015071 vs. TrEMBL
Match: A0A0D2T610_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G145000 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 9.7e-58
Identity = 117/126 (92.86%), Postives = 119/126 (94.44%), Query Frame = 1


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAA  GPKGKKKG TF IDCAKPVEDKIMDIASLEKFL ERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAA--GPKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDK KITV SDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDR+VYELRYFNIAEN
Sbjct: 61  VTRDKTKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEE+
Sbjct: 121 EGEEEE 124

[Close]

BLAST of Cla015071 vs. TrEMBL
Match: A0A0K9RHM6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_065570 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.3e-57
Identity = 116/126 (92.06%), Postives = 120/126 (95.24%), Query Frame = 1


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGA A+GG KGKKKG +F IDCAKPVEDKIMDIASLEKFL ERIKVGGKAGALGDSVT
Sbjct: 1   MSRGA-AAGGAKGKKKGASFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNK+RNVYELRYFNIAEN
Sbjct: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKERNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           E EEED
Sbjct: 121 EAEEED 125

[Close]

BLAST of Cla015071 vs. TrEMBL
Match: M5XE65_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013414mg PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.3e-57
Identity = 116/126 (92.06%), Postives = 120/126 (95.24%), Query Frame = 1


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAA  GPKGKKKGVTF IDC KPVEDKIMDIASLEKFL ERIKVGGKAGALGD+V+
Sbjct: 1   MSRGAAA--GPKGKKKGVTFTIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVS 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+K+KITV SDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of Cla015071 vs. NCBI nr
Match: gi|449436493|ref|XP_004136027.1| (PREDICTED: 60S ribosomal protein L22-2 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 2.6e-64
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Cla015071 vs. NCBI nr
Match: gi|1009148376|ref|XP_015891905.1| (PREDICTED: 60S ribosomal protein L22-2-like [Ziziphus jujuba])

HSP 1 Score: 232.3 bits (591), Expect = 4.8e-58
Identity = 117/126 (92.86%), Postives = 120/126 (95.24%), Query Frame = 1


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAA   GPKGKKKG TFVIDCAKPVEDKIMDIASLEKFL ERIKVGGKAGALG+SVT
Sbjct: 1   MSRGAAT--GPKGKKKGATFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGESVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+KNKITV SDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTREKNKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGE+ED
Sbjct: 121 EGEDED 124

[Close]

BLAST of Cla015071 vs. NCBI nr
Match: gi|449435649|ref|XP_004135607.1| (PREDICTED: 60S ribosomal protein L22-2 [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 8.2e-58
Identity = 116/126 (92.06%), Postives = 121/126 (96.03%), Query Frame = 1


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AA  GPKGKKKGVTF IDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDSV+
Sbjct: 1   MSRGGAA--GPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVS 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+K+KITV SDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRNVYELRYFNIAEN
Sbjct: 61  VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of Cla015071 vs. NCBI nr
Match: gi|802688857|ref|XP_012082776.1| (PREDICTED: 60S ribosomal protein L22-2 [Jatropha curcas])

HSP 1 Score: 231.1 bits (588), Expect = 1.1e-57
Identity = 117/126 (92.86%), Postives = 120/126 (95.24%), Query Frame = 1


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAA  G KGKKKG TFVIDCAKPVEDKIMDIASLEKFL ERIKVGGKAGALGDS+T
Sbjct: 1   MSRGAAA--GAKGKKKGATFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSIT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+K+KITV SDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of Cla015071 vs. NCBI nr
Match: gi|720011354|ref|XP_010259535.1| (PREDICTED: 60S ribosomal protein L22-2 [Nelumbo nucifera])

HSP 1 Score: 231.1 bits (588), Expect = 1.1e-57
Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 1


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG+A   GPKGKKKGVTF IDCAKPVEDKIMDIASLEKFL ERIKVGGKAGALGDS+T
Sbjct: 1   MSRGSAT--GPKGKKKGVTFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSIT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           V RDK+KITV SDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VARDKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 124

The following BLAST results are available for this feature:

BLAST of Cla015071 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL222_ARATH	8.5e-55	84.13	60S ribosomal protein L22-2 OS=Arabidopsis thaliana GN=RPL22B PE=2 SV=1	[more]
RL223_ARATH	9.4e-54	82.54	60S ribosomal protein L22-3 OS=Arabidopsis thaliana GN=RPL22C PE=2 SV=1	[more]
RL221_ARATH	8.8e-44	69.05	Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana GN=RPL22A PE=3 SV=1	[more]
RL22_RAT	4.8e-34	63.64	60S ribosomal protein L22 OS=Rattus norvegicus GN=Rpl22 PE=2 SV=2	[more]
RL22_CHICK	8.2e-34	63.11	60S ribosomal protein L22 OS=Gallus gallus GN=RPL22 PE=2 SV=1	[more]

BLAST of Cla015071 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K637_CUCSA	1.8e-64	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397560 PE=4 SV=1	[more]
A0A067JW95_JATCU	7.4e-58	92.86	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13938 PE=4 SV=1	[more]
A0A0D2T610_GOSRA	9.7e-58	92.86	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G145000 PE=4 SV=1	[more]
A0A0K9RHM6_SPIOL	1.3e-57	92.06	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_065570 PE=4 SV=1	[more]
M5XE65_PRUPE	1.3e-57	92.06	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013414mg PE=4 SV=1	[more]

BLAST of Cla015071 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449436493\|ref\|XP_004136027.1\|	2.6e-64	100.00	PREDICTED: 60S ribosomal protein L22-2 [Cucumis sativus]	[more]
gi\|1009148376\|ref\|XP_015891905.1\|	4.8e-58	92.86	PREDICTED: 60S ribosomal protein L22-2-like [Ziziphus jujuba]	[more]
gi\|449435649\|ref\|XP_004135607.1\|	8.2e-58	92.06	PREDICTED: 60S ribosomal protein L22-2 [Cucumis sativus]	[more]
gi\|802688857\|ref\|XP_012082776.1\|	1.1e-57	92.86	PREDICTED: 60S ribosomal protein L22-2 [Jatropha curcas]	[more]
gi\|720011354\|ref\|XP_010259535.1\|	1.1e-57	92.06	PREDICTED: 60S ribosomal protein L22-2 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002671	Ribosomal_L22e

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0002181	cytoplasmic translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU07232	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU08862	watermelon EST collection version 2.0	transcribed_cluster
WMU23768	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU33005	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU33900	watermelon EST collection version 2.0	transcribed_cluster
WMU35445	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU37459	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU74586	watermelon EST collection version 2.0	transcribed_cluster
WMU76580	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla015071	Cla015071.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU33005	WMU33005	transcribed_cluster
WMU76580	WMU76580	transcribed_cluster
WMU74586	WMU74586	transcribed_cluster
WMU07232	WMU07232	transcribed_cluster
WMU35445	WMU35445	transcribed_cluster
WMU23768	WMU23768	transcribed_cluster
WMU08862	WMU08862	transcribed_cluster
WMU37459	WMU37459	transcribed_cluster
WMU33900	WMU33900	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002671	Ribosomal protein L22e	PANTHER	PTHR10064	60S RIBOSOMAL PROTEIN L22	coord: 1..126 score: 1.3
IPR002671	Ribosomal protein L22e	PFAM	PF01776	Ribosomal_L22e	coord: 16..124 score: 2.9
None	No IPR available	PANTHER	PTHR10064:SF3	SUBFAMILY NOT NAMED	coord: 1..126 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla015071	Cla97C09G168350	Watermelon (97103) v2	wmwmbB041
Cla015071	Csa7G397560	Cucumber (Chinese Long) v2	cuwmB568
Cla015071	MELO3C015999	Melon (DHL92) v3.5.1	mewmB184
Cla015071	ClCG09G005850	Watermelon (Charleston Gray)	wcgwmB007
Cla015071	CSPI07G17500	Wild cucumber (PI 183967)	cpiwmB587
Cla015071	Cucsa.205550	Cucumber (Gy14) v1	cgywmB402
Cla015071	CmaCh08G004250	Cucurbita maxima (Rimu)	cmawmB856
Cla015071	CmaCh17G010850	Cucurbita maxima (Rimu)	cmawmB328
Cla015071	CmoCh08G004190	Cucurbita moschata (Rifu)	cmowmB843
Cla015071	CmoCh17G010600	Cucurbita moschata (Rifu)	cmowmB322
Cla015071	Lsi02G024070	Bottle gourd (USVL1VR-Ls)	lsiwmB175
Cla015071	Cp4.1LG17g06990	Cucurbita pepo (Zucchini)	cpewmB311
Cla015071	Cp4.1LG12g05660	Cucurbita pepo (Zucchini)	cpewmB131
Cla015071	MELO3C015999.2	Melon (DHL92) v3.6.1	medwmB181
Cla015071	CsaV3_7G029290	Cucumber (Chinese Long) v3	cucwmB593
Cla015071	Bhi09G000719	Wax gourd	wgowmB586

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla015071	Cucumber (Chinese Long) v2	cuwmB191
Cla015071	Cucumber (Gy14) v2	cgybwmB530
Cla015071	Silver-seed gourd	carwmB0106
Cla015071	Silver-seed gourd	carwmB0559
Cla015071	Watermelon (97103) v2	wmwmbB027
Cla015071	Wax gourd	wgowmB170
Cla015071	Watermelon (97103) v1	wmwmB022