MELO3C015982.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C015982.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Unknown protein
Location	chr01 : 32278416 .. 32280105 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACCAAACTACCTCCCACACTGATTTCCTCCTTCCCTTGATGATCATTTCAATGCCGCCCGACCACGAAAAATCAAGCTTTCACCTCGAGAGACCGAACAAACCAACCAACAAGAAGAACGTCGAATTGGGTACTGTCGAAAATAATGGTGTTTTGCGGTTGGTCATGTGGGGTGGAGCCTTCGTTTTTGGATGTCTACTCATAGCTTCTACATTTAAGAAGAGCAAGAAGATCACCACATCCCCTAAAAGGAGTCGAGAGGGTGATTCAGATCTTGACGTTATTGCGGACGATAAAGCTCAAGAAATGGAAGGATTGCGACTTGTTCTGTCTTCATCAACTGATATCATCAGTCATCTATGGTTAGAACTAAAAACTCCACATTTCCTTTGTTGAGTGAGATGTGTGATCATTTCTTCCCTTTAACATCCCTACCTATATTTGATTTCTACTTTGCAGTTAAAAACAATTAAAACTAATCAAAATTAACAATTGTTTGAACTTTAACTCGTCCATTATCCATGTAATTATGTGTTTTTTCATAAATGTTTTCACTTGATTTCATTCAAAATAAACTACACAAAAACATTTAATTTTCTCCCAAAATCCTACCAAAGTAAAAAAAAAATTGTAATAATTATTTTTCAAATAAGTGAAGAAACATGTTGGGAAGAAGAGAGGATGAAAAACTATGTAAGTTTATCTTTAATATTTTGAGCACCAAAAGACAATAGATCATGTGTTAAAATCTCTAAAATGTTATTTGATTTCATTCTCAATTAATTATATTAATTTTTAATTATTGTATATTTTTTTACATATTTGAATTAGTTTACCAAGTAAAGTGAAAAGTGAATAAGATGATGTAAATATTAATTTAATCTAATCCATAAGCTTAAGTTTTTGAATCAATGATGATTTAAAACGACTTAATTATAAGCTTAATATTCATTTGATTATAGTATTAATTCCATCTTGAGATGAGAATAATAATACATGTATAACTGCTGGTGAATACTAATATGAAGATCATCTAAATTCTAAATTGGTTTCATCTATAATAGTTTAATAATTGAGAGGTTTATTTAGTGTATATATTATCTTTTTGTAGCCACACGTCGTCAAAAATGTTAACGAATTCAATAGAAGACTCCGAATATGAAAATCTACCTATAACAACGGAATCCATCTTAGAAAAGAAAGATCAAGAGGAAAATATTGTGGTTATTATTTATGAAGAAGAAGAGTACACAAATTCAGAATTAGATTCCATAGAAAATGCAACCCAGAAATATGATGAAAGCTCAAACGTTGCACAAAGTTTTCCATCTACAGCATTATTTGATGAATATGACAAGAAAAGGCCATCATCGACATCATCTTCCTCGTCTTCGTATTCATCTTCATCATTGTCATCTACATTGTCAGAAGAAACTTCATCTACTGGAGTTCTTTCACAAGAGATCGAAGAAGATGACAAAAATATTGATATCATTATATATATTGATCATGATGATGAGAATTACGAAGGCGAACATGATCATATATATATAGTGTGATATGTCGGAGAATCTTGATCTAATTTGTGTTTATATTTGGTAAGGAAAATACTATTTAGTTTTCATCTTGTTTATATTGGTTTGTTTTAGTTCATTATGATTTCGTTTATAATCAGATAATCGATATATA

mRNA sequence

ACACCAAACTACCTCCCACACTGATTTCCTCCTTCCCTTGATGATCATTTCAATGCCGCCCGACCACGAAAAATCAAGCTTTCACCTCGAGAGACCGAACAAACCAACCAACAAGAAGAACGTCGAATTGGGTACTGTCGAAAATAATGGTGTTTTGCGGTTGGTCATGTGGGGTGGAGCCTTCGTTTTTGGATGTCTACTCATAGCTTCTACATTTAAGAAGAGCAAGAAGATCACCACATCCCCTAAAAGGAGTCGAGAGGGTGATTCAGATCTTGACGTTATTGCGGACGATAAAGCTCAAGAAATGGAAGGATTGCGACTTGTTCTGTCTTCATCAACTGATATCATCAGTCATCTATGCCACACGTCGTCAAAAATGTTAACGAATTCAATAGAAGACTCCGAATATGAAAATCTACCTATAACAACGGAATCCATCTTAGAAAAGAAAGATCAAGAGGAAAATATTGTGGTTATTATTTATGAAGAAGAAGAGTACACAAATTCAGAATTAGATTCCATAGAAAATGCAACCCAGAAATATGATGAAAGCTCAAACGTTGCACAAAGTTTTCCATCTACAGCATTATTTGATGAATATGACAAGAAAAGGCCATCATCGACATCATCTTCCTCGTCTTCGTATTCATCTTCATCATTGTCATCTACATTGTCAGAAGAAACTTCATCTACTGGAGTTCTTTCACAAGAGATCGAAGAAGATGACAAAAATATTGATATCATTATATATATTGATCATGATGATGAGAATTACGAAGGCGAACATGATCATATATATATAGTGTGATATGTCGGAGAATCTTGATCTAATTTGTGTTTATATTTGGTAAGGAAAATACTATTTAGTTTTCATCTTGTTTATATTGGTTTGTTTTAGTTCATTATGATTTCGTTTATAATCAGATAATCGATATATA

Coding sequence (CDS)

ATGATCATTTCAATGCCGCCCGACCACGAAAAATCAAGCTTTCACCTCGAGAGACCGAACAAACCAACCAACAAGAAGAACGTCGAATTGGGTACTGTCGAAAATAATGGTGTTTTGCGGTTGGTCATGTGGGGTGGAGCCTTCGTTTTTGGATGTCTACTCATAGCTTCTACATTTAAGAAGAGCAAGAAGATCACCACATCCCCTAAAAGGAGTCGAGAGGGTGATTCAGATCTTGACGTTATTGCGGACGATAAAGCTCAAGAAATGGAAGGATTGCGACTTGTTCTGTCTTCATCAACTGATATCATCAGTCATCTATGCCACACGTCGTCAAAAATGTTAACGAATTCAATAGAAGACTCCGAATATGAAAATCTACCTATAACAACGGAATCCATCTTAGAAAAGAAAGATCAAGAGGAAAATATTGTGGTTATTATTTATGAAGAAGAAGAGTACACAAATTCAGAATTAGATTCCATAGAAAATGCAACCCAGAAATATGATGAAAGCTCAAACGTTGCACAAAGTTTTCCATCTACAGCATTATTTGATGAATATGACAAGAAAAGGCCATCATCGACATCATCTTCCTCGTCTTCGTATTCATCTTCATCATTGTCATCTACATTGTCAGAAGAAACTTCATCTACTGGAGTTCTTTCACAAGAGATCGAAGAAGATGACAAAAATATTGATATCATTATATATATTGATCATGATGATGAGAATTACGAAGGCGAACATGATCATATATATATAGTGTGA

Protein sequence

MIISMPPDHEKSSFHLERPNKPTNKKNVELGTVENNGVLRLVMWGGAFVFGCLLIASTFKKSKKITTSPKRSREGDSDLDVIADDKAQEMEGLRLVLSSSTDIISHLCHTSSKMLTNSIEDSEYENLPITTESILEKKDQEENIVVIIYEEEEYTNSELDSIENATQKYDESSNVAQSFPSTALFDEYDKKRPSSTSSSSSSYSSSSLSSTLSEETSSTGVLSQEIEEDDKNIDIIIYIDHDDENYEGEHDHIYIV

Homology

[Close]

BLAST of MELO3C015982.2 vs. NCBI nr
Match: XP_008451548.1 (PREDICTED: uncharacterized protein LOC103492795 [Cucumis melo])

HSP 1 Score: 382.5 bits (981), Expect = 1.1e-102
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MIISMPPDHEKSSFHLERPNKPTNKKNVELGTVENNGVLRLVMWGGAFVFGCLLIASTFK 60
           MIISMPPDHEKSSFHLERPNKPTNKKNVELGTVENNGVLRLVMWGGAFVFGCLLIASTFK
Sbjct: 1   MIISMPPDHEKSSFHLERPNKPTNKKNVELGTVENNGVLRLVMWGGAFVFGCLLIASTFK 60

Query: 61  KSKKITTSPKRSREGDSDLDVIADDKAQEMEGLRLVLSSSTDIISHLCHTSSKMLTNSIE 120
           KSKKITTSPKRSREGDSDLDVIADDKAQEMEGLRLVLSSSTDIISHLCHTSSKMLTNSIE
Sbjct: 61  KSKKITTSPKRSREGDSDLDVIADDKAQEMEGLRLVLSSSTDIISHLCHTSSKMLTNSIE 120

Query: 121 DSEYENLPITTESILEXXXXXXXXXXXXXXXXXYTNSELDSIENATQKYDESSNVAQSFP 180
           DSEYENLPITTESILEXXXXXXXXXXXXXXXXXYTNSELDSIENATQKYDESSNVAQSFP
Sbjct: 121 DSEYENLPITTESILEXXXXXXXXXXXXXXXXXYTNSELDSIENATQKYDESSNVAQSFP 180

Query: 181 STALFDEYDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEIEEDDKNIDIIIYID 240
           STALFDEYDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEIEEDDKNIDIIIYID
Sbjct: 181 STALFDEYDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEIEEDDKNIDIIIYID 240

Query: 241 HDDENYEGEHDHIYIV 257
           HDDENYEGEHDHIYIV
Sbjct: 241 HDDENYEGEHDHIYIV 256

[Close]

BLAST of MELO3C015982.2 vs. NCBI nr
Match: KGN44958.1 (hypothetical protein Csa_7G398200 [Cucumis sativus])

HSP 1 Score: 194.5 bits (493), Expect = 4.4e-46
Identity = 108/141 (76.60%), Postives = 116/141 (82.27%), Query Frame = 0


Query: 5   MPPDHE-KSSFHLERPNKPTNKKNVELGTVENNGVLRLVMWGGAFVFGCLLIASTFKKSK 64
           MPPDH+ KSSFHLERP+KP NKKNVELGTVEN GVLRLVMWGGAFVFGCLLIASTFKKSK
Sbjct: 1   MPPDHKTKSSFHLERPDKPANKKNVELGTVENTGVLRLVMWGGAFVFGCLLIASTFKKSK 60

Query: 65  KITTSPKRSREGDSDLDVIA----------DDKAQEMEGLRLVLSSSTDIISHLCHTSSK 124
           K + SPK  REG S+LDVI           DDKA++MEGLRL+LSSSTDIISH CHTSSK
Sbjct: 61  K-SISPKTCREGVSNLDVIGGFKESSTRDDDDKARKMEGLRLILSSSTDIISHPCHTSSK 120

Query: 125 MLTNSIEDSEYENLPITTESI 135
           M TNSIEDS  ENL +TTE I
Sbjct: 121 MSTNSIEDSVDENLTLTTEPI 140

[Close]

BLAST of MELO3C015982.2 vs. NCBI nr
Match: XP_011659778.1 (PREDICTED: putative uncharacterized protein DDB_G0281733 [Cucumis sativus])

HSP 1 Score: 194.5 bits (493), Expect = 4.4e-46
Identity = 108/141 (76.60%), Postives = 116/141 (82.27%), Query Frame = 0


Query: 5   MPPDHE-KSSFHLERPNKPTNKKNVELGTVENNGVLRLVMWGGAFVFGCLLIASTFKKSK 64
           MPPDH+ KSSFHLERP+KP NKKNVELGTVEN GVLRLVMWGGAFVFGCLLIASTFKKSK
Sbjct: 1   MPPDHKTKSSFHLERPDKPANKKNVELGTVENTGVLRLVMWGGAFVFGCLLIASTFKKSK 60

Query: 65  KITTSPKRSREGDSDLDVIA----------DDKAQEMEGLRLVLSSSTDIISHLCHTSSK 124
           K + SPK  REG S+LDVI           DDKA++MEGLRL+LSSSTDIISH CHTSSK
Sbjct: 61  K-SISPKTCREGVSNLDVIGGFKESSTRDDDDKARKMEGLRLILSSSTDIISHPCHTSSK 120

Query: 125 MLTNSIEDSEYENLPITTESI 135
           M TNSIEDS  ENL +TTE I
Sbjct: 121 MSTNSIEDSVDENLTLTTEPI 140

[Close]

BLAST of MELO3C015982.2 vs. NCBI nr
Match: XP_022991241.1 (uncharacterized protein LOC111487956 [Cucurbita maxima])

HSP 1 Score: 79.7 bits (195), Expect = 1.6e-11
Identity = 68/169 (40.24%), Postives = 91/169 (53.85%), Query Frame = 0


Query: 32  TVENNGVLRLVMW-GGAFVFGCLLIASTFKKSKKITTSPKRSREGDSDLDV--------- 91
           ++ ++ + R V W GG FVF CLL+ STFK SKKI TSPK  R+ DS+LDV         
Sbjct: 9   SLRSDKLSRWVTWGGGVFVFACLLVVSTFKMSKKIITSPKTGRDDDSNLDVDSFGESTRC 68

Query: 92  IADDKAQEMEGLRLVLSSSTDIISHLCHTSSKMLT--NSIEDSEY-ENLPITTESILEXX 151
           + ++  QE E      SSSTD+ISH C+ +S+ML   + +EDS   E   +TT+SI E  
Sbjct: 69  VDEETRQEDERQWFRQSSSTDLISHSCYPTSQMLVKYSLLEDSVIDETQTLTTKSIPE-K 128

Query: 152 XXXXXXXXXXXXXXXYTNSELDSIENATQKYDESSNVAQSFPSTALFDE 188
                          YT+SE  S+EN          VA+SF S+  FDE
Sbjct: 129 NDEENIVVNNYEEEEYTDSE-KSVEN---------GVAESF-SSEEFDE 165

[Close]

BLAST of MELO3C015982.2 vs. NCBI nr
Match: XP_023548989.1 (uncharacterized protein LOC111807479 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 79.3 bits (194), Expect = 2.1e-11
Identity = 60/147 (40.82%), Postives = 82/147 (55.78%), Query Frame = 0


Query: 2   IISMPPDHEKSSFHLERPNKPTNKKNVELGTVENNGVLRLVMW-GGAFVFGCLLIASTFK 61
           +ISMP D EK S                   + ++ + R V W GGAFVFGCLL  STFK
Sbjct: 1   MISMPFDREKLS-------------------LSSDSLSRWVTWGGGAFVFGCLLAVSTFK 60

Query: 62  KSKKITTSPKRSREGDSDLDV-------IADDKAQEMEGLRLV-LSSSTDIISHLCHTSS 121
             K I T PKR R+ DS+LDV         D++ ++ + L+L   SSSTD+ISH  H +S
Sbjct: 61  MRKNIITPPKRGRDDDSNLDVGFGESTRCVDEETRQKDELQLFRQSSSTDLISHSRHPTS 120

Query: 122 KMLT--NSIEDSEY-ENLPITTESILE 137
           ++L   +  EDS + E   +TT+S+LE
Sbjct: 121 QILVKYSPPEDSVFDETQTVTTKSVLE 128

[Close]

BLAST of MELO3C015982.2 vs. TrEMBL
Match: tr|A0A1S3BRP4|A0A1S3BRP4_CUCME (uncharacterized protein LOC103492795 OS=Cucumis melo OX=3656 GN=LOC103492795 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 7.5e-103
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MIISMPPDHEKSSFHLERPNKPTNKKNVELGTVENNGVLRLVMWGGAFVFGCLLIASTFK 60
           MIISMPPDHEKSSFHLERPNKPTNKKNVELGTVENNGVLRLVMWGGAFVFGCLLIASTFK
Sbjct: 1   MIISMPPDHEKSSFHLERPNKPTNKKNVELGTVENNGVLRLVMWGGAFVFGCLLIASTFK 60

Query: 61  KSKKITTSPKRSREGDSDLDVIADDKAQEMEGLRLVLSSSTDIISHLCHTSSKMLTNSIE 120
           KSKKITTSPKRSREGDSDLDVIADDKAQEMEGLRLVLSSSTDIISHLCHTSSKMLTNSIE
Sbjct: 61  KSKKITTSPKRSREGDSDLDVIADDKAQEMEGLRLVLSSSTDIISHLCHTSSKMLTNSIE 120

Query: 121 DSEYENLPITTESILEXXXXXXXXXXXXXXXXXYTNSELDSIENATQKYDESSNVAQSFP 180
           DSEYENLPITTESILEXXXXXXXXXXXXXXXXXYTNSELDSIENATQKYDESSNVAQSFP
Sbjct: 121 DSEYENLPITTESILEXXXXXXXXXXXXXXXXXYTNSELDSIENATQKYDESSNVAQSFP 180

Query: 181 STALFDEYDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEIEEDDKNIDIIIYID 240
           STALFDEYDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEIEEDDKNIDIIIYID
Sbjct: 181 STALFDEYDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEIEEDDKNIDIIIYID 240

Query: 241 HDDENYEGEHDHIYIV 257
           HDDENYEGEHDHIYIV
Sbjct: 241 HDDENYEGEHDHIYIV 256

[Close]

BLAST of MELO3C015982.2 vs. TrEMBL
Match: tr|A0A0A0K656|A0A0A0K656_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398200 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.9e-46
Identity = 108/141 (76.60%), Postives = 116/141 (82.27%), Query Frame = 0


Query: 5   MPPDHE-KSSFHLERPNKPTNKKNVELGTVENNGVLRLVMWGGAFVFGCLLIASTFKKSK 64
           MPPDH+ KSSFHLERP+KP NKKNVELGTVEN GVLRLVMWGGAFVFGCLLIASTFKKSK
Sbjct: 1   MPPDHKTKSSFHLERPDKPANKKNVELGTVENTGVLRLVMWGGAFVFGCLLIASTFKKSK 60

Query: 65  KITTSPKRSREGDSDLDVIA----------DDKAQEMEGLRLVLSSSTDIISHLCHTSSK 124
           K + SPK  REG S+LDVI           DDKA++MEGLRL+LSSSTDIISH CHTSSK
Sbjct: 61  K-SISPKTCREGVSNLDVIGGFKESSTRDDDDKARKMEGLRLILSSSTDIISHPCHTSSK 120

Query: 125 MLTNSIEDSEYENLPITTESI 135
           M TNSIEDS  ENL +TTE I
Sbjct: 121 MSTNSIEDSVDENLTLTTEPI 140

The following BLAST results are available for this feature:

BLAST of MELO3C015982.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451548.1	1.1e-102	100.00	PREDICTED: uncharacterized protein LOC103492795 [Cucumis melo]	[more]
KGN44958.1	4.4e-46	76.60	hypothetical protein Csa_7G398200 [Cucumis sativus]	[more]
XP_011659778.1	4.4e-46	76.60	PREDICTED: putative uncharacterized protein DDB_G0281733 [Cucumis sativus]	[more]
XP_022991241.1	1.6e-11	40.24	uncharacterized protein LOC111487956 [Cucurbita maxima]	[more]
XP_023548989.1	2.1e-11	40.82	uncharacterized protein LOC111807479 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C015982.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C015982.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C015982.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BRP4\|A0A1S3BRP4_CUCME	7.5e-103	100.00	uncharacterized protein LOC103492795 OS=Cucumis melo OX=3656 GN=LOC103492795 PE=...	[more]
tr\|A0A0A0K656\|A0A0A0K656_CUCSA	2.9e-46	76.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398200 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015982.2.1	MELO3C015982.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..223

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C015982.2	Csa7G398200	Cucumber (Chinese Long) v2	cumedB511
MELO3C015982.2	CSPI07G17640	Wild cucumber (PI 183967)	cpimedB525
MELO3C015982.2	CmaCh17G010730	Cucurbita maxima (Rimu)	cmamedB373
MELO3C015982.2	CmoCh17G010450	Cucurbita moschata (Rifu)	cmomedB359
MELO3C015982.2	Lsi02G024180	Bottle gourd (USVL1VR-Ls)	lsimedB201
MELO3C015982.2	Cp4.1LG12g05680	Cucurbita pepo (Zucchini)	cpemedB145
MELO3C015982.2	CsGy7G016080	Cucumber (Gy14) v2	cgybmedB467
MELO3C015982.2	Cla015082	Watermelon (97103) v1	medwmB206
MELO3C015982.2	ClCG09G005730	Watermelon (Charleston Gray)	medwcgB178
MELO3C015982.2	Bhi09G000736	Wax gourd	medwgoB255
MELO3C015982.2	Carg07161	Silver-seed gourd	carmedB0112
MELO3C015982.2	CsaV3_7G029450	Cucumber (Chinese Long) v3	cucmedB538

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C015982.2	Watermelon (97103) v2	medwmbB194
MELO3C015982.2	Watermelon (97103) v2	medwmbB218
MELO3C015982.2	Cucumber (Gy14) v1	cgymedB368
MELO3C015982.2	Cucurbita maxima (Rimu)	cmamedB930
MELO3C015982.2	Cucurbita pepo (Zucchini)	cpemedB341
MELO3C015982.2	Watermelon (Charleston Gray)	medwcgB155
MELO3C015982.2	Watermelon (97103) v1	medwmB181