MELO3C014694 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C014694
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description50S ribosomal protein L11
Locationchr5 : 350738 .. 351598 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTCTATTTCACAGGGAAAGGAAGTTCCGGCGAACAGCTATGGCCACCTTGAAAGAGATTCTCACCAGACGACCCGTCTCTGCCACCATCAGGCTCACCGTCCCTGCCGGTGGAGCTCGCCCTGCGCCACCGGTGGGTCCAGCGCTGGGTCAATACCGGCTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCCCGGACTCAAAAGTACAAACCTGACACACCCATGGCCGTAACCATTACAGCTTTCAAGGACAACACCTTCGAGTTCACCGTCAAATCACCGTCAGTCACTTGGTACTTGAAGAAAGCTGCCGGGATCGAATCTGGGAGCAGCCGCCCAGGCCACGTAGTCGCCTCCACGCTCTCAGTCAAGCACATTTACGAGATCGCCAAAGTCAAGCAATCTGATCCTTATTGCCAGTACATGCCACTAGAATCCATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGGAATTAAAGTCCTAAACGAATTAGAGTAATGCAACAGCTAAATTTCTAGGGTTTTTTTTTTTCCTCTTATTGTTCTTCAGTATCTCGATTTAAATTGAGGGTTTTTTGCAGTGACCTACATCTTCTTACTGTGAATCAATGTTATTATTCCGTATGCTAAGTCGGCTATCTATTCCTGACAGCTTAAGTTTCTCTAAATTCGTTAGAAATTGAACCAATTCCAACGATTTGCTCCTGAATGTCAAGGAAATGGGGCAAGGATAATAGCTAAATAAAAGCTATCTTTCATCATTAGAGTTTGCTATGGAACCATGGCCATTCTGTGAGTTGTGAACTGATTTCATTTTGATGAACCAGTTAGTAATGAACTACCCTCCAATTC

mRNA sequence

GATTCTATTTCACAGGGAAAGGAAGTTCCGGCGAACAGCTATGGCCACCTTGAAAGAGATTCTCACCAGACGACCCGTCTCTGCCACCATCAGGCTCACCGTCCCTGCCGGTGGAGCTCGCCCTGCGCCACCGGTGGGTCCAGCGCTGGGTCAATACCGGCTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCCCGGACTCAAAAGTACAAACCTGACACACCCATGGCCGTAACCATTACAGCTTTCAAGGACAACACCTTCGAGTTCACCGTCAAATCACCGTCAGTCACTTGGTACTTGAAGAAAGCTGCCGGGATCGAATCTGGGAGCAGCCGCCCAGGCCACGTAGTCGCCTCCACGCTCTCAGTCAAGCACATTTACGAGATCGCCAAAGTCAAGCAATCTGATCCTTATTGCCAGTACATGCCACTAGAATCCATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGGAATTAAAGTCCTAAACGAATTAGAGTAATGCAACAGCTAAATTTCTAGGGTTTTTTTTTTTCCTCTTATTGTTCTTCAGTATCTCGATTTAAATTGAGGGTTTTTTGCAGTGACCTACATCTTCTTACTGTGAATCAATGTTATTATTCCGTATGCTAAGTCGGCTATCTATTCCTGACAGCTTAAGTTTCTCTAAATTCGTTAGAAATTGAACCAATTCCAACGATTTGCTCCTGAATGTCAAGGAAATGGGGCAAGGATAATAGCTAAATAAAAGCTATCTTTCATCATTAGAGTTTGCTATGGAACCATGGCCATTCTGTGAGTTGTGAACTGATTTCATTTTGATGAACCAGTTAGTAATGAACTACCCTCCAATTC

Coding sequence (CDS)

ATGGCCACCTTGAAAGAGATTCTCACCAGACGACCCGTCTCTGCCACCATCAGGCTCACCGTCCCTGCCGGTGGAGCTCGCCCTGCGCCACCGGTGGGTCCAGCGCTGGGTCAATACCGGCTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCCCGGACTCAAAAGTACAAACCTGACACACCCATGGCCGTAACCATTACAGCTTTCAAGGACAACACCTTCGAGTTCACCGTCAAATCACCGTCAGTCACTTGGTACTTGAAGAAAGCTGCCGGGATCGAATCTGGGAGCAGCCGCCCAGGCCACGTAGTCGCCTCCACGCTCTCAGTCAAGCACATTTACGAGATCGCCAAAGTCAAGCAATCTGATCCTTATTGCCAGTACATGCCACTAGAATCCATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGGAATTAAAGTCCTAAACGAATTAGAGTAA

Protein sequence

MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE*
Homology
[Close]
BLAST of MELO3C014694 vs. Swiss-Prot
Match: RM19_SCHPO (54S ribosomal protein L19, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrpl19 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.7e-34
Identity = 70/135 (51.85%), Postives = 90/135 (66.67%), Query Frame = 1 

Query: 17  IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFE 76
           I+L VPAG A P PP+GPALG   L  + FCK+FNART  + P+TP+   IT     TF 
Sbjct: 9   IKLIVPAGKATPTPPIGPALGARGLKSIDFCKEFNARTAGWMPNTPVPCKITVTPQRTFT 68

Query: 77  FTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESIC 136
           FT+ +P  +W + K   +E GSS P H +   LS+KHIYEIAK+K +DP  Q + L S+C
Sbjct: 69  FTIHTPPTSWLISKTLDLEKGSSSPLHDIKGQLSLKHIYEIAKLKSTDPSLQGIELLSLC 128

Query: 137 KSIIGTANSMGIKVL 152
           KS+IGTA SMG+KV+
Sbjct: 129 KSVIGTAKSMGVKVV 143

[Close]
BLAST of MELO3C014694 vs. Swiss-Prot
Match: RL11_RHOP5 (50S ribosomal protein L11 OS=Rhodopseudomonas palustris (strain BisA53) GN=rplK PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-29
Identity = 65/140 (46.43%), Postives = 94/140 (67.14%), Query Frame = 1 

Query: 11  RPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAF 70
           + V+  ++L VPAG A P+PP+GPALGQ  LN+M FCK+FNA+TQK + +TP+ V IT +
Sbjct: 3   KKVTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKNFNAQTQKEEKNTPIPVVITIY 62

Query: 71  KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDPYCQYM 130
            D +F F +K+P ++++LK+AA I+SGS  PG  VA  +S   + EIA+ K  D  C   
Sbjct: 63  ADRSFTFEMKTPPMSFFLKQAAKIQSGSKLPGRDVAGKVSSAQVREIAERKMKDLNCD-- 122

Query: 131 PLESICKSIIGTANSMGIKV 151
            +ES  + + G+A SMG++V
Sbjct: 123 SIESAMRMVEGSARSMGLQV 140

[Close]
BLAST of MELO3C014694 vs. Swiss-Prot
Match: RL11_AQUAE (50S ribosomal protein L11 OS=Aquifex aeolicus (strain VF5) GN=rplK PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.6e-29
Identity = 66/140 (47.14%), Postives = 92/140 (65.71%), Query Frame = 1 

Query: 11  RPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAF 70
           + V ATI L +PA  A PAPPVGPALGQ+ +N+M F K FNA ++ Y+P T + V IT +
Sbjct: 3   KKVVATIELMLPAQQASPAPPVGPALGQHGVNIMEFVKQFNAASRDYEPGTILPVVITVY 62

Query: 71  KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDPYCQYM 130
           +D +F F +K+P V++ LKKAAG+E GSS P  V    ++VK + EIAK+K  D      
Sbjct: 63  QDRSFTFIMKTPPVSYLLKKAAGVEKGSSDPKRVKVGKITVKQLEEIAKMKMKD--MNTR 122

Query: 131 PLESICKSIIGTANSMGIKV 151
            L++  +++ GTA SMGI++
Sbjct: 123 DLKAAMRTVAGTAKSMGIEI 140

[Close]
BLAST of MELO3C014694 vs. Swiss-Prot
Match: RL11_PARL1 (50S ribosomal protein L11 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rplK PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.6e-29
Identity = 66/141 (46.81%), Postives = 88/141 (62.41%), Query Frame = 1 

Query: 11  RPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAF 70
           + +   I+L VPAG A P+PP+GPALGQ  LN+M FCK FNA TQK +   P+ V ITAF
Sbjct: 3   KKIEGYIKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAATQKMEQGMPIPVVITAF 62

Query: 71  KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDPYCQYM 130
            D +F F +K+P  +++LKKAA + SGS  PG   A T++V    EIA+ K +D      
Sbjct: 63  SDRSFTFAMKTPPASYFLKKAAKVTSGSKTPGRASAGTVTVAQCREIAEAKMAD--LNAN 122

Query: 131 PLESICKSIIGTANSMGIKVL 152
            L+   K I G+A SMG++V+
Sbjct: 123 DLDQATKIIAGSARSMGLQVV 141

[Close]
BLAST of MELO3C014694 vs. Swiss-Prot
Match: RL11_BLOFL (50S ribosomal protein L11 OS=Blochmannia floridanus GN=rplK PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.4e-29
Identity = 65/148 (43.92%), Postives = 94/148 (63.51%), Query Frame = 1 

Query: 7   ILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVT 66
           ++ ++ V + I+L + A  A P+PP+GPALGQ  +N+M FCKDFN RT  ++    + V 
Sbjct: 1   MIVKKKVQSCIKLQIEARSATPSPPIGPALGQQGINIMKFCKDFNTRTADFEMGLILPVV 60

Query: 67  ITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDPY 126
           IT + D +F F +K+P+  + LKKAAGI+SGS +P  V    + +  IYEIAK+K  D  
Sbjct: 61  ITVYVDRSFSFVIKTPTAVFLLKKAAGIKSGSEKPKCVSVGKVLISQIYEIAKIKLID-- 120

Query: 127 CQYMPLESICKSIIGTANSMGIKVLNEL 155
              + LES  KSI+GTA S+G++V + L
Sbjct: 121 MTSLNLESASKSIMGTARSIGLEVEDNL 146

[Close]
BLAST of MELO3C014694 vs. TrEMBL
Match: A0A0A0KWT6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G279840 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.0e-81
Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 1 

Query: 1   MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKP+
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPE 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120
           TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 155

[Close]
BLAST of MELO3C014694 vs. TrEMBL
Match: A0A061DFE6_THECC (Mitochondrial ribosomal protein L11 OS=Theobroma cacao GN=TCM_000052 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 6.1e-78
Identity = 144/155 (92.90%), Postives = 153/155 (98.71%), Query Frame = 1 

Query: 1   MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           M+TLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MSTLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120
           TPMAVTITAFKDNTFEF VKSPSVTWYLKKAAGIESGSSRPGHV+A+TLSV+HIYEIAK+
Sbjct: 61  TPMAVTITAFKDNTFEFIVKSPSVTWYLKKAAGIESGSSRPGHVIATTLSVRHIYEIAKI 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYM LESICKSIIGTAN+MGIKV+NEL+
Sbjct: 121 KQSDPYCQYMSLESICKSIIGTANTMGIKVVNELD 155

[Close]
BLAST of MELO3C014694 vs. TrEMBL
Match: A0A0D2NBV6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G199600 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 2.3e-77
Identity = 143/155 (92.26%), Postives = 153/155 (98.71%), Query Frame = 1 

Query: 1   MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           M+TLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MSTLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120
           TPM+VTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVA+TLSV+HIYEIAK+
Sbjct: 61  TPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVATTLSVRHIYEIAKI 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYM LESICKSIIGTAN+MGIKV+ +L+
Sbjct: 121 KQSDPYCQYMSLESICKSIIGTANTMGIKVVKDLD 155

[Close]
BLAST of MELO3C014694 vs. TrEMBL
Match: A0A067G7I7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031693mg PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 3.0e-77
Identity = 144/155 (92.90%), Postives = 152/155 (98.06%), Query Frame = 1 

Query: 1   MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKP+
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPE 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120
           TPM+VTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHV AST+++KHIYEIAKV
Sbjct: 61  TPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKV 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYMPLESICKSIIGTA +MGIKV+ ELE
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTAATMGIKVVKELE 155

[Close]
BLAST of MELO3C014694 vs. TrEMBL
Match: V4RUW5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026688mg PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 6.8e-77
Identity = 143/155 (92.26%), Postives = 152/155 (98.06%), Query Frame = 1 

Query: 1   MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKP+
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPE 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120
           TPM+VTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHV AST+++KHIYEIAKV
Sbjct: 61  TPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKV 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYMPLESICKSIIGTA +MGIKV+ EL+
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTAATMGIKVVKELD 155

[Close]
BLAST of MELO3C014694 vs. TAIR10
Match: AT4G35490.1 (AT4G35490.1 mitochondrial ribosomal protein L11)

HSP 1 Score: 274.2 bits (700), Expect = 4.8e-74
Identity = 130/154 (84.42%), Postives = 145/154 (94.16%), Query Frame = 1 

Query: 2   ATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDT 61
           A  KEIL RRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDT
Sbjct: 3   AAAKEIL-RRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDT 62

Query: 62  PMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVK 121
           PMAVTITAFKDN+FEFTVKSP+V+WY+KKAAG++ GS+RPGH+  +TLSV+H+YEIAKVK
Sbjct: 63  PMAVTITAFKDNSFEFTVKSPTVSWYIKKAAGVDKGSTRPGHLSVTTLSVRHVYEIAKVK 122

Query: 122 QSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           Q+DP+CQYMPLESICKSIIGTANSMGIK++ +LE
Sbjct: 123 QTDPFCQYMPLESICKSIIGTANSMGIKIVQDLE 155

[Close]
BLAST of MELO3C014694 vs. TAIR10
Match: AT1G32990.1 (AT1G32990.1 plastid ribosomal protein l11)

HSP 1 Score: 103.6 bits (257), Expect = 1.1e-22
Identity = 60/140 (42.86%), Postives = 78/140 (55.71%), Query Frame = 1 

Query: 11  RPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAF 70
           + V   I+L + AG A PAPPVGPALG   +N+MAFCKD+NART   K    + V IT F
Sbjct: 72  KKVVGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTAD-KAGYIIPVEITVF 131

Query: 71  KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDPYCQYM 130
            D +F F +K+P  +  L KAAG+E GS  P       +++  +  IA  K  D  C   
Sbjct: 132 DDKSFTFILKTPPASVLLLKAAGVEKGSKDPQQDKVGVITIDQLRTIAAEKLPDLNC--T 191

Query: 131 PLESICKSIIGTANSMGIKV 151
            +ES  + I GTA +MGI +
Sbjct: 192 TIESAMRIIAGTAANMGIDI 208

[Close]
BLAST of MELO3C014694 vs. TAIR10
Match: AT5G51610.1 (AT5G51610.1 Ribosomal protein L11 family protein)

HSP 1 Score: 52.0 bits (123), Expect = 3.9e-07
Identity = 26/79 (32.91%), Postives = 44/79 (55.70%), Query Frame = 1 

Query: 72  DNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDPYCQYMP 131
           D +F F +K+P  ++ L KAAG++ GS  P  +    +++  + +IA+VK  +  C    
Sbjct: 92  DQSFTFILKTPPTSFLLLKAAGVKKGSKDPKQIKVGMITIDQVRKIAEVKLPELNC--TT 151

Query: 132 LESICKSIIGTANSMGIKV 151
           + S  ++I GTA +MGI +
Sbjct: 152 IVSTMRTIAGTAGNMGIDI 168

[Close]
BLAST of MELO3C014694 vs. NCBI nr
Match: gi|659097841|ref|XP_008449842.1| (PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis melo])

HSP 1 Score: 312.4 bits (799), Expect = 4.5e-82
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1 

Query: 1   MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120
           TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 155

[Close]
BLAST of MELO3C014694 vs. NCBI nr
Match: gi|449448846|ref|XP_004142176.1| (PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis sativus])

HSP 1 Score: 309.7 bits (792), Expect = 2.9e-81
Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 1 

Query: 1   MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKP+
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPE 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120
           TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 155

[Close]
BLAST of MELO3C014694 vs. NCBI nr
Match: gi|590701799|ref|XP_007046480.1| (Mitochondrial ribosomal protein L11 [Theobroma cacao])

HSP 1 Score: 298.1 bits (762), Expect = 8.8e-78
Identity = 144/155 (92.90%), Postives = 153/155 (98.71%), Query Frame = 1 

Query: 1   MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           M+TLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MSTLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120
           TPMAVTITAFKDNTFEF VKSPSVTWYLKKAAGIESGSSRPGHV+A+TLSV+HIYEIAK+
Sbjct: 61  TPMAVTITAFKDNTFEFIVKSPSVTWYLKKAAGIESGSSRPGHVIATTLSVRHIYEIAKI 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYM LESICKSIIGTAN+MGIKV+NEL+
Sbjct: 121 KQSDPYCQYMSLESICKSIIGTANTMGIKVVNELD 155

[Close]
BLAST of MELO3C014694 vs. NCBI nr
Match: gi|1009144058|ref|XP_015889592.1| (PREDICTED: 54S ribosomal protein L19, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 297.7 bits (761), Expect = 1.2e-77
Identity = 146/155 (94.19%), Postives = 152/155 (98.06%), Query Frame = 1 

Query: 1   MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120
           TPMAV ITA+KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS+KHIYEIAKV
Sbjct: 61  TPMAVMITAYKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSLKHIYEIAKV 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYM LESICKSIIGTAN+MGIKV+ +L+
Sbjct: 121 KQSDPYCQYMSLESICKSIIGTANTMGIKVVKDLD 155

[Close]
BLAST of MELO3C014694 vs. NCBI nr
Match: gi|823126060|ref|XP_012487400.1| (PREDICTED: 54S ribosomal protein L19, mitochondrial [Gossypium raimondii])

HSP 1 Score: 296.2 bits (757), Expect = 3.3e-77
Identity = 143/155 (92.26%), Postives = 153/155 (98.71%), Query Frame = 1 

Query: 1   MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           M+TLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MSTLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120
           TPM+VTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVA+TLSV+HIYEIAK+
Sbjct: 61  TPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVATTLSVRHIYEIAKI 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYM LESICKSIIGTAN+MGIKV+ +L+
Sbjct: 121 KQSDPYCQYMSLESICKSIIGTANTMGIKVVKDLD 155

The following BLAST results are available for this feature:
BLAST of MELO3C014694 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RM19_SCHPO2.7e-3451.8554S ribosomal protein L19, mitochondrial OS=Schizosaccharomyces pombe (strain 97... [more]
RL11_RHOP51.2e-2946.4350S ribosomal protein L11 OS=Rhodopseudomonas palustris (strain BisA53) GN=rplK ... [more]
RL11_AQUAE2.6e-2947.1450S ribosomal protein L11 OS=Aquifex aeolicus (strain VF5) GN=rplK PE=3 SV=1[more]
RL11_PARL12.6e-2946.8150S ribosomal protein L11 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 130... [more]
RL11_BLOFL3.4e-2943.9250S ribosomal protein L11 OS=Blochmannia floridanus GN=rplK PE=3 SV=1[more]
BLAST of MELO3C014694 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWT6_CUCSA2.0e-8198.71Uncharacterized protein OS=Cucumis sativus GN=Csa_4G279840 PE=3 SV=1[more]
A0A061DFE6_THECC6.1e-7892.90Mitochondrial ribosomal protein L11 OS=Theobroma cacao GN=TCM_000052 PE=3 SV=1[more]
A0A0D2NBV6_GOSRA2.3e-7792.26Uncharacterized protein OS=Gossypium raimondii GN=B456_001G199600 PE=3 SV=1[more]
A0A067G7I7_CITSI3.0e-7792.90Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031693mg PE=3 SV=1[more]
V4RUW5_9ROSI6.8e-7792.26Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026688mg PE=3 SV=1[more]
BLAST of MELO3C014694 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35490.14.8e-7484.42 mitochondrial ribosomal protein L11[more]
AT1G32990.11.1e-2242.86 plastid ribosomal protein l11[more]
AT5G51610.13.9e-0732.91 Ribosomal protein L11 family protein[more]
BLAST of MELO3C014694 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659097841|ref|XP_008449842.1|4.5e-82100.00PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis melo][more]
gi|449448846|ref|XP_004142176.1|2.9e-8198.71PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis sativus][more]
gi|590701799|ref|XP_007046480.1|8.8e-7892.90Mitochondrial ribosomal protein L11 [Theobroma cacao][more]
gi|1009144058|ref|XP_015889592.1|1.2e-7794.19PREDICTED: 54S ribosomal protein L19, mitochondrial [Ziziphus jujuba][more]
gi|823126060|ref|XP_012487400.1|3.3e-7792.26PREDICTED: 54S ribosomal protein L19, mitochondrial [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000911Ribosomal_L11/L12
IPR006519Ribosomal_L11_bac-typ
IPR020783Ribosomal_L11_C
IPR020784Ribosomal_L11_N
IPR020785Ribosomal_L11_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0000027 ribosomal large subunit assembly
cellular_component GO:0005840 ribosome
cellular_component GO:0005762 mitochondrial large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0019843 rRNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU49577melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014694T1MELO3C014694T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU49577MU49577transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000911Ribosomal protein L11/L12HAMAPMF_00736Ribosomal_L11coord: 13..152
score: 25
IPR000911Ribosomal protein L11/L12PANTHERPTHR1166160S RIBOSOMAL PROTEIN L12coord: 5..155
score: 4.8
IPR000911Ribosomal protein L11/L12SMARTSM00649rl11ccoord: 17..151
score: 1.1
IPR006519Ribosomal protein L11, bacterial-typeTIGRFAMsTIGR01632TIGR01632coord: 13..150
score: 2.2
IPR020783Ribosomal protein L11, C-terminalGENE3DG3DSA:1.10.10.250coord: 81..150
score: 2.8
IPR020783Ribosomal protein L11, C-terminalPFAMPF00298Ribosomal_L11coord: 80..150
score: 5.9
IPR020783Ribosomal protein L11, C-terminalunknownSSF46906Ribosomal protein L11, C-terminal domaincoord: 76..150
score: 1.18
IPR020784Ribosomal protein L11, N-terminalGENE3DG3DSA:3.30.1550.10coord: 12..80
score: 3.7
IPR020784Ribosomal protein L11, N-terminalPFAMPF03946Ribosomal_L11_Ncoord: 17..75
score: 1.0
IPR020784Ribosomal protein L11, N-terminalunknownSSF54747Ribosomal L11/L12e N-terminal domaincoord: 13..80
score: 7.98
IPR020785Ribosomal protein L11, conserved sitePROSITEPS00359RIBOSOMAL_L11coord: 137..152
scor
NoneNo IPR availablePRODOMPD001367coord: 44..82
score: 2.0
NoneNo IPR availablePANTHERPTHR11661:SF139S RIBOSOMAL PROTEIN L11, MITOCHONDRIALcoord: 5..155
score: 4.8