MU49577 (transcribed_cluster) Melon (DHL92) v3.5.1

Overview
NameMU49577
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description50S ribosomal protein L11
Locationchr5 : 350738 .. 351599 (+)
Sequence length858
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GATTCTATTTCACAGGGAAAGGAAGTTCCGGCGAACAGCTATGGCCACCTTGAAAGAGATTCTCACCAGACGACCCGTCTCTGCCACCATCAGGCTCACCGTCCCTGCCGGTGGAGCTCGCCCTGCGCCACCGGTGGGTCCAGCGCTGGGTCAATACCGGCTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCCCGGACTCAAAAGTACAAACCTGACACACCCATGGCCGTAACCATTACAGCTTTCAAGGACAACACCTTCGAGTTCACCGTCAAATCACCGTCAGTCACTTGGTACTTGAAGAAAGCTGCCGGGATCGAATCTGGGAGCAGCCGCCCAGGCCACGTAGTCGCCTCCACGCTCTCAGTCAAGCACATTTACGAGATCGCCAAAGTCAAGCAATCTGATCCTTATTGCCAGTACATGCCACTAGAATCCATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGGAATTAAAGTCCTAAACGAATTAGAGTAATGCAACAGCTAAATTTCTAGGGTTTTTTTTCCTCTTATTGTTCTTCAGTATCTCGATTTAAATTGAGGGTTTTTTGCAGTGACCTACATCTTCTTACTGTGAATCAATGTTATTATTCCGTATGCTAAGTCGGCTATCTATTCCTGACAGCTTAAGTTTCTCTAAATTCGTTAGAAATTGAACCAATTCCAACGATTTGCTCCTGAATGTCAAGGAAATGGGGCAAGGATAATAGCTAAATAAAAGCTATCTTTCATCATTAGAGTTTGCTATGGAACCATGGCCATTCTGTGAGTTGTGAACTGATTTCATTTTGATGAACCAGTTAGTAATGAACTACCCTCCAATTC
Homology
[Close]
BLAST of MU49577 vs. Swiss-Prot
Match: RM19_SCHPO (54S ribosomal protein L19, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrpl19 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.2e-25
Identity = 55/111 (49.55%), Postives = 72/111 (64.86%), Query Frame = 2 

Query: 161 LNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR 220
           L  + FCK+FNART  + P+TP+   IT     TF FT+ +P  +W + K   +E GSS 
Sbjct: 33  LKSIDFCKEFNARTAGWMPNTPVPCKITVTPQRTFTFTIHTPPTSWLISKTLDLEKGSSS 92

Query: 221 PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVL 280
           P H +   LS+KHIYEIAK+K +DP  Q + L S+CKS+IGTA SMG+KV+
Sbjct: 93  PLHDIKGQLSLKHIYEIAKLKSTDPSLQGIELLSLCKSVIGTAKSMGVKVV 143

Query: 281  340
           
Sbjct: 153  143

Query: 341  400
           
Sbjct: 213  143

Query: 401  460
           
Sbjct: 273  143

Query: 461  494
           
Sbjct: 333  143

[Close]
BLAST of MU49577 vs. Swiss-Prot
Match: RM11_DROME (39S ribosomal protein L11, mitochondrial OS=Drosophila melanogaster GN=mRpL11 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.1e-20
Identity = 45/118 (38.14%), Postives = 73/118 (61.86%), Query Frame = 2 

Query: 152 QYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESG 211
           Q  +N+ AFCKDFNA+T + K   P+   I+   D +++  +  P  T++LK+AAGI+ G
Sbjct: 45  QRAINIAAFCKDFNAKTAEMKEGVPLPCRISVNSDRSYDLAIHHPPATFFLKQAAGIQRG 104

Query: 212 SSRPGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 271
           +  PG  VA  +++KH+YEIA +K  DP    + ++ +C+ +I  A + GIKV+ E++
Sbjct: 105 TMTPGKEVAGMITLKHLYEIAAIKIQDPPNVLLTMQQMCEMLISIARTCGIKVVREID 162

Query: 272  331
           
Sbjct: 165  162

Query: 332  391
           
Sbjct: 225  162

Query: 392  451
           
Sbjct: 285  162

Query: 452  506
           
Sbjct: 345  162

[Close]
BLAST of MU49577 vs. Swiss-Prot
Match: RL11_BLOFL (50S ribosomal protein L11 OS=Blochmannia floridanus GN=rplK PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-20
Identity = 55/148 (37.16%), Postives = 82/148 (55.41%), Query Frame = 2 

Query: 59  ILTRRPVSATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPDTPMAVT 118
           ++ ++ V + I+L +                Q  +N+M FCKDFN RT  ++    + V 
Sbjct: 1   MIVKKKVQSCIKLQIEARSATPSPPIGPALGQQGINIMKFCKDFNTRTADFEMGLILPVV 60

Query: 119 ITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDPY 178
           IT + D +F F +K+P+  + LKKAAGI+SGS +P  V    + +  IYEIAK+K  D  
Sbjct: 61  ITVYVDRSFSFVIKTPTAVFLLKKAAGIKSGSEKPKCVSVGKVLISQIYEIAKIKLID-- 120

Query: 179 CQYMPLESICKSIIGTANSMGIKVLNEL 238
              + LES  KSI+GTA S+G++V + L
Sbjct: 121 MTSLNLESASKSIMGTARSIGLEVEDNL 146

Query: 239  298
           
Sbjct: 181  146

Query: 299  358
           
Sbjct: 241  146

Query: 359  418
           
Sbjct: 301  146

Query: 419  478
           
Sbjct: 361  146

Query: 479  503
           
Sbjct: 421  146

[Close]
BLAST of MU49577 vs. Swiss-Prot
Match: RM11_HUMAN (39S ribosomal protein L11, mitochondrial OS=Homo sapiens GN=MRPL11 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.8e-20
Identity = 56/148 (37.84%), Postives = 82/148 (55.41%), Query Frame = 2 

Query: 68  RRP-VSATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPDTPMAVTIT 127
           R+P V   IR  V                Q  +++  FCK+FN RT+  K   P+   I 
Sbjct: 12  RKPEVGGVIRAIVRAGLAMPGPPLGPVLGQRGVSINQFCKEFNERTKDIKEGIPLPTKIL 71

Query: 128 AFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDP--Y 187
              D TFE  +  P+V+++LK AAGIE G+ + G  VA  +++KH+YEIA++K  D    
Sbjct: 72  VKPDRTFEIKIGQPTVSYFLKAAAGIEKGARQTGKEVAGLVTLKHVYEIARIKAQDEAFA 131

Query: 188 CQYMPLESICKSIIGTANSMGIKVLNEL 247
            Q +PL S+ +SIIG+A S+GI+V+ +L
Sbjct: 132 LQDVPLSSVVRSIIGSARSLGIRVVKDL 159

Query: 248  307
           
Sbjct: 192  159

Query: 308  367
           
Sbjct: 252  159

Query: 368  427
           
Sbjct: 312  159

Query: 428  487
           
Sbjct: 372  159

Query: 488  503
           
Sbjct: 432  159

[Close]
BLAST of MU49577 vs. Swiss-Prot
Match: RM11_RAT (39S ribosomal protein L11, mitochondrial OS=Rattus norvegicus GN=Mrpl11 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.1e-20
Identity = 51/119 (42.86%), Postives = 75/119 (63.03%), Query Frame = 2 

Query: 152 QYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESG 211
           Q  +++  FCK+FN +T+  K   P+   I    D TFE  +  P+++++LK AAGIE G
Sbjct: 41  QRGVSINQFCKEFNEKTKDIKEGIPLPTKIFIKPDRTFELKIGQPTISYFLKAAAGIEKG 100

Query: 212 SSRPGHVVASTLSVKHIYEIAKVKQSDP--YCQYMPLESICKSIIGTANSMGIKVLNEL 271
           + + G  VA  +S+KH+YEIA+VK  D     Q +PL SI +SIIG+A S+GI+V+ +L
Sbjct: 101 ARQTGKEVAGLVSLKHVYEIARVKAKDEAFAMQDVPLSSIVRSIIGSARSLGIRVVKDL 159

Query: 272  331
           
Sbjct: 161  159

Query: 332  391
           
Sbjct: 221  159

Query: 392  451
           
Sbjct: 281  159

Query: 452  503
           
Sbjct: 341  159

[Close]
BLAST of MU49577 vs. TrEMBL
Match: A0A0A0KWT6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G279840 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.3e-69
Identity = 137/155 (88.39%), Postives = 139/155 (89.68%), Query Frame = 2 

Query: 41  MATLKEILTRRPVSATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPD 100
           MATLKEILTRRPV+ATIRLTV                QYRLNLMAFCKDFNARTQKYKP+
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPE 60

Query: 101 TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 160
           TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120

Query: 161 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 220
           KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 155

Query: 221  280
           
Sbjct: 181  155

Query: 281  340
           
Sbjct: 241  155

Query: 341  400
           
Sbjct: 301  155

Query: 401  460
           
Sbjct: 361  155

Query: 461  506
           
Sbjct: 421  155

[Close]
BLAST of MU49577 vs. TrEMBL
Match: A0A061DFE6_THECC (Mitochondrial ribosomal protein L11 OS=Theobroma cacao GN=TCM_000052 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.3e-65
Identity = 128/155 (82.58%), Postives = 137/155 (88.39%), Query Frame = 2 

Query: 41  MATLKEILTRRPVSATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPD 100
           M+TLKEILTRRPV+ATIRLTV                QYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MSTLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 101 TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 160
           TPMAVTITAFKDNTFEF VKSPSVTWYLKKAAGIESGSSRPGHV+A+TLSV+HIYEIAK+
Sbjct: 61  TPMAVTITAFKDNTFEFIVKSPSVTWYLKKAAGIESGSSRPGHVIATTLSVRHIYEIAKI 120

Query: 161 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 220
           KQSDPYCQYM LESICKSIIGTAN+MGIKV+NEL+
Sbjct: 121 KQSDPYCQYMSLESICKSIIGTANTMGIKVVNELD 155

Query: 221  280
           
Sbjct: 181  155

Query: 281  340
           
Sbjct: 241  155

Query: 341  400
           
Sbjct: 301  155

Query: 401  460
           
Sbjct: 361  155

Query: 461  506
           
Sbjct: 421  155

[Close]
BLAST of MU49577 vs. TrEMBL
Match: A0A0D2NBV6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G199600 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 4.9e-65
Identity = 127/155 (81.94%), Postives = 137/155 (88.39%), Query Frame = 2 

Query: 41  MATLKEILTRRPVSATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPD 100
           M+TLKEILTRRPV+ATIRLTV                QYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MSTLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 101 TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 160
           TPM+VTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVA+TLSV+HIYEIAK+
Sbjct: 61  TPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVATTLSVRHIYEIAKI 120

Query: 161 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 220
           KQSDPYCQYM LESICKSIIGTAN+MGIKV+ +L+
Sbjct: 121 KQSDPYCQYMSLESICKSIIGTANTMGIKVVKDLD 155

Query: 221  280
           
Sbjct: 181  155

Query: 281  340
           
Sbjct: 241  155

Query: 341  400
           
Sbjct: 301  155

Query: 401  460
           
Sbjct: 361  155

Query: 461  506
           
Sbjct: 421  155

[Close]
BLAST of MU49577 vs. TrEMBL
Match: A0A067G7I7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031693mg PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 6.4e-65
Identity = 128/155 (82.58%), Postives = 136/155 (87.74%), Query Frame = 2 

Query: 41  MATLKEILTRRPVSATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPD 100
           MATLKEILTRRPV+ATIRLTV                QYRLNLMAFCKDFNARTQKYKP+
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPE 60

Query: 101 TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 160
           TPM+VTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHV AST+++KHIYEIAKV
Sbjct: 61  TPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKV 120

Query: 161 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 220
           KQSDPYCQYMPLESICKSIIGTA +MGIKV+ ELE
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTAATMGIKVVKELE 155

Query: 221  280
           
Sbjct: 181  155

Query: 281  340
           
Sbjct: 241  155

Query: 341  400
           
Sbjct: 301  155

Query: 401  460
           
Sbjct: 361  155

Query: 461  506
           
Sbjct: 421  155

[Close]
BLAST of MU49577 vs. TrEMBL
Match: V4RUW5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026688mg PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.4e-64
Identity = 127/155 (81.94%), Postives = 136/155 (87.74%), Query Frame = 2 

Query: 41  MATLKEILTRRPVSATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPD 100
           MATLKEILTRRPV+ATIRLTV                QYRLNLMAFCKDFNARTQKYKP+
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPE 60

Query: 101 TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 160
           TPM+VTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHV AST+++KHIYEIAKV
Sbjct: 61  TPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKV 120

Query: 161 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 220
           KQSDPYCQYMPLESICKSIIGTA +MGIKV+ EL+
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTAATMGIKVVKELD 155

Query: 221  280
           
Sbjct: 181  155

Query: 281  340
           
Sbjct: 241  155

Query: 341  400
           
Sbjct: 301  155

Query: 401  460
           
Sbjct: 361  155

Query: 461  506
           
Sbjct: 421  155

[Close]
BLAST of MU49577 vs. TAIR10
Match: AT4G35490.1 (AT4G35490.1 mitochondrial ribosomal protein L11)

HSP 1 Score: 234.2 bits (596), Expect = 1.0e-61
Identity = 114/154 (74.03%), Postives = 129/154 (83.77%), Query Frame = 2 

Query: 44  ATLKEILTRRPVSATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPDT 103
           A  KEIL RRPV+ATIRLTV                QYRLNLMAFCKDFNARTQKYKPDT
Sbjct: 3   AAAKEIL-RRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDT 62

Query: 104 PMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVK 163
           PMAVTITAFKDN+FEFTVKSP+V+WY+KKAAG++ GS+RPGH+  +TLSV+H+YEIAKVK
Sbjct: 63  PMAVTITAFKDNSFEFTVKSPTVSWYIKKAAGVDKGSTRPGHLSVTTLSVRHVYEIAKVK 122

Query: 164 QSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 223
           Q+DP+CQYMPLESICKSIIGTANSMGIK++ +LE
Sbjct: 123 QTDPFCQYMPLESICKSIIGTANSMGIKIVQDLE 155

Query: 224  283
           
Sbjct: 183  155

Query: 284  343
           
Sbjct: 243  155

Query: 344  403
           
Sbjct: 303  155

Query: 404  463
           
Sbjct: 363  155

Query: 464  506
           
Sbjct: 423  155

[Close]
BLAST of MU49577 vs. TAIR10
Match: AT1G32990.1 (AT1G32990.1 plastid ribosomal protein l11)

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-13
Identity = 44/110 (40.00%), Postives = 59/110 (53.64%), Query Frame = 2 

Query: 161 LNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR 220
           +N+MAFCKD+NART   K    + V IT F D +F F +K+P  +  L KAAG+E GS  
Sbjct: 102 VNIMAFCKDYNARTAD-KAGYIIPVEITVFDDKSFTFILKTPPASVLLLKAAGVEKGSKD 161

Query: 221 PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV 280
           P       +++  +  IA  K  D  C    +ES  + I GTA +MGI +
Sbjct: 162 PQQDKVGVITIDQLRTIAAEKLPDLNC--TTIESAMRIIAGTAANMGIDI 208

Query: 281  340
           
Sbjct: 222  208

Query: 341  400
           
Sbjct: 282  208

Query: 401  460
           
Sbjct: 342  208

Query: 461  491
           
Sbjct: 402  208

[Close]
BLAST of MU49577 vs. TAIR10
Match: AT5G51610.1 (AT5G51610.1 Ribosomal protein L11 family protein)

HSP 1 Score: 52.0 bits (123), Expect = 7.1e-07
Identity = 26/79 (32.91%), Postives = 44/79 (55.70%), Query Frame = 2 

Query: 254 DNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDPYCQYMP 313
           D +F F +K+P  ++ L KAAG++ GS  P  +    +++  + +IA+VK  +  C    
Sbjct: 92  DQSFTFILKTPPTSFLLLKAAGVKKGSKDPKQIKVGMITIDQVRKIAEVKLPELNC--TT 151

Query: 314 LESICKSIIGTANSMGIKV 373
           + S  ++I GTA +MGI +
Sbjct: 152 IVSTMRTIAGTAGNMGIDI 168

Query: 374  433
           
Sbjct: 212  168

Query: 434  491
           
Sbjct: 272  168

[Close]
BLAST of MU49577 vs. NCBI nr
Match: gi|659097841|ref|XP_008449842.1| (PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis melo])

HSP 1 Score: 272.3 bits (695), Expect = 9.5e-70
Identity = 139/155 (89.68%), Postives = 139/155 (89.68%), Query Frame = 2 

Query: 41  MATLKEILTRRPVSATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPD 100
           MATLKEILTRRPVSATIRLTV                QYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 101 TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 160
           TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120

Query: 161 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 220
           KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 155

Query: 221  280
           
Sbjct: 181  155

Query: 281  340
           
Sbjct: 241  155

Query: 341  400
           
Sbjct: 301  155

Query: 401  460
           
Sbjct: 361  155

Query: 461  506
           
Sbjct: 421  155

[Close]
BLAST of MU49577 vs. NCBI nr
Match: gi|449448846|ref|XP_004142176.1| (PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 6.1e-69
Identity = 137/155 (88.39%), Postives = 139/155 (89.68%), Query Frame = 2 

Query: 41  MATLKEILTRRPVSATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPD 100
           MATLKEILTRRPV+ATIRLTV                QYRLNLMAFCKDFNARTQKYKP+
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPE 60

Query: 101 TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 160
           TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120

Query: 161 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 220
           KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 155

Query: 221  280
           
Sbjct: 181  155

Query: 281  340
           
Sbjct: 241  155

Query: 341  400
           
Sbjct: 301  155

Query: 401  460
           
Sbjct: 361  155

Query: 461  506
           
Sbjct: 421  155

[Close]
BLAST of MU49577 vs. NCBI nr
Match: gi|658005513|ref|XP_008337904.1| (PREDICTED: 54S ribosomal protein L19, mitochondrial [Malus domestica])

HSP 1 Score: 259.2 bits (661), Expect = 8.3e-66
Identity = 129/155 (83.23%), Postives = 136/155 (87.74%), Query Frame = 2 

Query: 41  MATLKEILTRRPVSATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPD 100
           MATLKEILTRRPV+ATIRLTV                QYRLNLMAFCKDFNARTQKYKP+
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGAARPVAPVGPALGQYRLNLMAFCKDFNARTQKYKPE 60

Query: 101 TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 160
           TPMAV ITAFKDNTFEFTV+SPSVTWYLKKAAGIESGSSRPGH VASTLSV+H+YEIAKV
Sbjct: 61  TPMAVIITAFKDNTFEFTVRSPSVTWYLKKAAGIESGSSRPGHAVASTLSVRHVYEIAKV 120

Query: 161 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 220
           KQSDPYCQYMPLESICKS+IGTANSMGIKV+ ELE
Sbjct: 121 KQSDPYCQYMPLESICKSVIGTANSMGIKVVKELE 155

Query: 221  280
           
Sbjct: 181  155

Query: 281  340
           
Sbjct: 241  155

Query: 341  400
           
Sbjct: 301  155

Query: 401  460
           
Sbjct: 361  155

Query: 461  506
           
Sbjct: 421  155

[Close]
BLAST of MU49577 vs. NCBI nr
Match: gi|658017653|ref|XP_008344181.1| (PREDICTED: 54S ribosomal protein L19, mitochondrial-like [Malus domestica])

HSP 1 Score: 258.5 bits (659), Expect = 1.4e-65
Identity = 128/155 (82.58%), Postives = 136/155 (87.74%), Query Frame = 2 

Query: 41  MATLKEILTRRPVSATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPD 100
           MATLKEILTRRPV+ATIRLTV                QYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MATLKEILTRRPVTATIRLTVPAGAARPVAPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 101 TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 160
           TPMAV ITAFKDNTFEFTV+SPSVTWYLKKAAGIESGSSRPGH VASTLSV+H+YEIAK+
Sbjct: 61  TPMAVIITAFKDNTFEFTVRSPSVTWYLKKAAGIESGSSRPGHAVASTLSVRHVYEIAKM 120

Query: 161 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 220
           KQSDPYCQYMPLESICKS+IGTANSMG+KV+ ELE
Sbjct: 121 KQSDPYCQYMPLESICKSVIGTANSMGMKVVKELE 155

Query: 221  280
           
Sbjct: 181  155

Query: 281  340
           
Sbjct: 241  155

Query: 341  400
           
Sbjct: 301  155

Query: 401  460
           
Sbjct: 361  155

Query: 461  506
           
Sbjct: 421  155

[Close]
BLAST of MU49577 vs. NCBI nr
Match: gi|590701799|ref|XP_007046480.1| (Mitochondrial ribosomal protein L11 [Theobroma cacao])

HSP 1 Score: 258.1 bits (658), Expect = 1.8e-65
Identity = 128/155 (82.58%), Postives = 137/155 (88.39%), Query Frame = 2 

Query: 41  MATLKEILTRRPVSATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPD 100
           M+TLKEILTRRPV+ATIRLTV                QYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MSTLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 101 TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 160
           TPMAVTITAFKDNTFEF VKSPSVTWYLKKAAGIESGSSRPGHV+A+TLSV+HIYEIAK+
Sbjct: 61  TPMAVTITAFKDNTFEFIVKSPSVTWYLKKAAGIESGSSRPGHVIATTLSVRHIYEIAKI 120

Query: 161 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 220
           KQSDPYCQYM LESICKSIIGTAN+MGIKV+NEL+
Sbjct: 121 KQSDPYCQYMSLESICKSIIGTANTMGIKVVNELD 155

Query: 221  280
           
Sbjct: 181  155

Query: 281  340
           
Sbjct: 241  155

Query: 341  400
           
Sbjct: 301  155

Query: 401  460
           
Sbjct: 361  155

Query: 461  506
           
Sbjct: 421  155

The following BLAST results are available for this feature:
BLAST of MU49577 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RM19_SCHPO4.2e-2549.5554S ribosomal protein L19, mitochondrial OS=Schizosaccharomyces pombe (strain 97... [more]
RM11_DROME1.1e-2038.1439S ribosomal protein L11, mitochondrial OS=Drosophila melanogaster GN=mRpL11 PE... [more]
RL11_BLOFL1.4e-2037.1650S ribosomal protein L11 OS=Blochmannia floridanus GN=rplK PE=3 SV=1[more]
RM11_HUMAN1.8e-2037.8439S ribosomal protein L11, mitochondrial OS=Homo sapiens GN=MRPL11 PE=1 SV=1[more]
RM11_RAT3.1e-2042.8639S ribosomal protein L11, mitochondrial OS=Rattus norvegicus GN=Mrpl11 PE=2 SV=... [more]
BLAST of MU49577 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWT6_CUCSA4.3e-6988.39Uncharacterized protein OS=Cucumis sativus GN=Csa_4G279840 PE=3 SV=1[more]
A0A061DFE6_THECC1.3e-6582.58Mitochondrial ribosomal protein L11 OS=Theobroma cacao GN=TCM_000052 PE=3 SV=1[more]
A0A0D2NBV6_GOSRA4.9e-6581.94Uncharacterized protein OS=Gossypium raimondii GN=B456_001G199600 PE=3 SV=1[more]
A0A067G7I7_CITSI6.4e-6582.58Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031693mg PE=3 SV=1[more]
V4RUW5_9ROSI1.4e-6481.94Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026688mg PE=3 SV=1[more]
BLAST of MU49577 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35490.11.0e-6174.03 mitochondrial ribosomal protein L11[more]
AT1G32990.11.3e-1340.00 plastid ribosomal protein l11[more]
AT5G51610.17.1e-0732.91 Ribosomal protein L11 family protein[more]
BLAST of MU49577 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659097841|ref|XP_008449842.1|9.5e-7089.68PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis melo][more]
gi|449448846|ref|XP_004142176.1|6.1e-6988.39PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis sativus][more]
gi|658005513|ref|XP_008337904.1|8.3e-6683.23PREDICTED: 54S ribosomal protein L19, mitochondrial [Malus domestica][more]
gi|658017653|ref|XP_008344181.1|1.4e-6582.58PREDICTED: 54S ribosomal protein L19, mitochondrial-like [Malus domestica][more]
gi|590701799|ref|XP_007046480.1|1.8e-6582.58Mitochondrial ribosomal protein L11 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR000911Ribosomal_L11/L12
IPR006519Ribosomal_L11_bac-typ
IPR020783Ribosomal_L11_C
IPR020784Ribosomal_L11_N
IPR020785Ribosomal_L11_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C014694MELO3C014694gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
CA10YC16FM1CA10YC16FM1EST
DA8YM06FM1DA8YM06FM1EST
FR16O7FR16O7EST
GA17YG10FM1GA17YG10FM1EST
GA20YK13FM1GA20YK13FM1EST
GA38YO08FM1GA38YO08FM1EST
GA51YO03FM1GA51YO03FM1EST
PS21F07PS21F07EST
PS34C10PS34C10EST


InterPro
Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000911Ribosomal protein L11/L12HAMAPMF_00736Ribosomal_L11coord: 13..152
score: 25
IPR000911Ribosomal protein L11/L12PANTHERPTHR1166160S RIBOSOMAL PROTEIN L12coord: 5..155
score: 4.8
IPR000911Ribosomal protein L11/L12SMARTSM00649rl11ccoord: 17..151
score: 1.1
IPR006519Ribosomal protein L11, bacterial-typeTIGRFAMsTIGR01632TIGR01632coord: 13..150
score: 2.2
IPR020783Ribosomal protein L11, C-terminalGENE3DG3DSA:1.10.10.250coord: 81..150
score: 2.8
IPR020783Ribosomal protein L11, C-terminalPFAMPF00298Ribosomal_L11coord: 80..150
score: 5.9
IPR020783Ribosomal protein L11, C-terminalunknownSSF46906Ribosomal protein L11, C-terminal domaincoord: 76..150
score: 1.18
IPR020784Ribosomal protein L11, N-terminalGENE3DG3DSA:3.30.1550.10coord: 12..80
score: 3.7
IPR020784Ribosomal protein L11, N-terminalPFAMPF03946Ribosomal_L11_Ncoord: 17..75
score: 1.0
IPR020784Ribosomal protein L11, N-terminalunknownSSF54747Ribosomal L11/L12e N-terminal domaincoord: 13..80
score: 7.98
IPR020785Ribosomal protein L11, conserved sitePROSITEPS00359RIBOSOMAL_L11coord: 137..152
scor
NoneNo IPR availablePRODOMPD001367coord: 44..82
score: 2.0
NoneNo IPR availablePANTHERPTHR11661:SF139S RIBOSOMAL PROTEIN L11, MITOCHONDRIALcoord: 5..155
score: 4.8