MELO3C011890 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C011890
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Locationchr10 : 4091450 .. 4092383 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACATAATTAACCGTGCACGATACTTAAAATCAAATCCCCAATCAACAACTTCATTATAAACCCAAAATCCAATCATACCTCAATACGTAATAAGAAACCCAACAAATTTTGGCATTAATCTCATCATCAATGGACCTTCAATTACCACTATTCTTCTCCATGTTTCTATTCGTATACACCTTCGCTTACTCGGTTCTCCTTCGAAATTGGGGGCCAAAGCACAGATTAGAAGCTTCAAGTTGCTTCATATCCCTCGCCCATGGCACTCCCGTCGTAATCCTCGCCACAATCGCAATTCTCCAATCTCCAAATCCAACCGATTTCGCCGCTCCAAACACCAAATTCCAAGCCCTAGTTCTCGAATACAGCATAGCGTATTTCTCACTAGATCTTCTTCATTGCGTATCGTTTTCTCCAAATGATTTCGTCTTCATATTTCATCATCTAGCAGTGCTTTACGTCTTCGTTACATGTAATTACATTGTTGGTTGTGGGGCTGTGCCGATTCTAGGGCTTTTGGTGGTGGCGGAATTAAGCAGTGGGTGCCAAAATGCTTGGACCCTTGCGGGGTATAGAAGGACGGAAATTGTAGCCGCGGCTAAGTTTGAGGAGTTTGTGACTCCGTATTTCTTAACGTTTTATAGTGTTTTACGAGTGGGATTGGCGCCGGTGGTTGTGTGCAAAATGGGGGAGTTTTATGTTGGCAGTTTGGTAATGAGTGGGAATTTGATTCCTACGTGGGCTTGGATTTCTTGGCTTTGTGTCATTGGTATGGCTATTTTTGGTAGTGTTTTGTGGGTTGGAAATCATTGGCTTCTTTGGTTTCGCCCCACTCAGAATAGAAAAGAAAAAGTAAGTTCATATGTATCTCACTAAATTGTTTAATTATAATTTGTCAAAAAAAAATTTCATCTTTAATGTGTGATAATATACA

mRNA sequence

ACATAATTAACCGTGCACGATACTTAAAATCAAATCCCCAATCAACAACTTCATTATAAACCCAAAATCCAATCATACCTCAATACGTAATAAGAAACCCAACAAATTTTGGCATTAATCTCATCATCAATGGACCTTCAATTACCACTATTCTTCTCCATGTTTCTATTCGTATACACCTTCGCTTACTCGGTTCTCCTTCGAAATTGGGGGCCAAAGCACAGATTAGAAGCTTCAAGTTGCTTCATATCCCTCGCCCATGGCACTCCCGTCGTAATCCTCGCCACAATCGCAATTCTCCAATCTCCAAATCCAACCGATTTCGCCGCTCCAAACACCAAATTCCAAGCCCTAGTTCTCGAATACAGCATAGCGTATTTCTCACTAGATCTTCTTCATTGCGTATCGTTTTCTCCAAATGATTTCGTCTTCATATTTCATCATCTAGCAGTGCTTTACGTCTTCGTTACATGTAATTACATTGTTGGTTGTGGGGCTGTGCCGATTCTAGGGCTTTTGGTGGTGGCGGAATTAAGCAGTGGGTGCCAAAATGCTTGGACCCTTGCGGGGTATAGAAGGACGGAAATTGTAGCCGCGGCTAAGTTTGAGGAGTTTGTGACTCCGTATTTCTTAACGTTTTATAGTGTTTTACGAGTGGGATTGGCGCCGGTGGTTGTGTGCAAAATGGGGGAGTTTTATGTTGGCAGTTTGGTAATGAGTGGGAATTTGATTCCTACGTGGGCTTGGATTTCTTGGCTTTGTGTCATTGGTATGGCTATTTTTGGTAGTGTTTTGTGGGTTGGAAATCATTGGCTTCTTTGGTTTCGCCCCACTCAGAATAGAAAAGAAAAAGTAAGTTCATATGTATCTCACTAAATTGTTTAATTATAATTTGTCAAAAAAAAATTTCATCTTTAATGTGTGATAATATACA

Coding sequence (CDS)

ATGGACCTTCAATTACCACTATTCTTCTCCATGTTTCTATTCGTATACACCTTCGCTTACTCGGTTCTCCTTCGAAATTGGGGGCCAAAGCACAGATTAGAAGCTTCAAGTTGCTTCATATCCCTCGCCCATGGCACTCCCGTCGTAATCCTCGCCACAATCGCAATTCTCCAATCTCCAAATCCAACCGATTTCGCCGCTCCAAACACCAAATTCCAAGCCCTAGTTCTCGAATACAGCATAGCGTATTTCTCACTAGATCTTCTTCATTGCGTATCGTTTTCTCCAAATGATTTCGTCTTCATATTTCATCATCTAGCAGTGCTTTACGTCTTCGTTACATGTAATTACATTGTTGGTTGTGGGGCTGTGCCGATTCTAGGGCTTTTGGTGGTGGCGGAATTAAGCAGTGGGTGCCAAAATGCTTGGACCCTTGCGGGGTATAGAAGGACGGAAATTGTAGCCGCGGCTAAGTTTGAGGAGTTTGTGACTCCGTATTTCTTAACGTTTTATAGTGTTTTACGAGTGGGATTGGCGCCGGTGGTTGTGTGCAAAATGGGGGAGTTTTATGTTGGCAGTTTGGTAATGAGTGGGAATTTGATTCCTACGTGGGCTTGGATTTCTTGGCTTTGTGTCATTGGTATGGCTATTTTTGGTAGTGTTTTGTGGGTTGGAAATCATTGGCTTCTTTGGTTTCGCCCCACTCAGAATAGAAAAGAAAAAGTAAGTTCATATGTATCTCACTAA

Protein sequence

MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKEKVSSYVSH*
Homology
[Close]
BLAST of MELO3C011890 vs. TrEMBL
Match: A0A0A0KVB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G590130 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 3.5e-128
Identity = 224/239 (93.72%), Postives = 229/239 (95.82%), Query Frame = 1 

Query: 1   MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP 60
           MDLQLPLFF+MFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILA IAILQSP
Sbjct: 1   MDLQLPLFFAMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILAAIAILQSP 60

Query: 61  NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG 120
           N TDFAAPNTKFQALVLEYSIAYFSLDLLHC+ FSPNDFVFIFHHLAVLYVFVTCNYIVG
Sbjct: 61  NSTDFAAPNTKFQALVLEYSIAYFSLDLLHCLLFSPNDFVFIFHHLAVLYVFVTCNYIVG 120

Query: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP 180
           CGAVPILGLLVVAELSSGCQNAWTLAGYRRTE+VAAAKFEEFV PYFLTFYSVLRVGLAP
Sbjct: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEMVAAAKFEEFVAPYFLTFYSVLRVGLAP 180

Query: 181 VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRK 240
           VVVCKMGEFYVGSL MSGNLIPTWAWISW+CVIG+AIFGSVLWVGNHWLLWF    N K
Sbjct: 181 VVVCKMGEFYVGSLGMSGNLIPTWAWISWMCVIGLAIFGSVLWVGNHWLLWFHRITNTK 239

[Close]
BLAST of MELO3C011890 vs. TrEMBL
Match: A0A061EEX7_THECC (DNA-binding storekeeper protein-related OS=Theobroma cacao GN=TCM_010762 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.5e-65
Identity = 125/229 (54.59%), Postives = 162/229 (70.74%), Query Frame = 1 

Query: 6   PLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP-NPTD 65
           P FF +FL +Y FAY ++ RNWGPKHR EASSCFISLAHGTP V +A  A++ +  +P  
Sbjct: 12  PTFFLLFLSIYLFAYFLVFRNWGPKHRPEASSCFISLAHGTPAVFMAAHALINTTQSPPT 71

Query: 66  FAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAV 125
           FA+PN+    +VLEYSI+YF +DL+H + F PND +FI HHLA LYVF TC Y+V  GA 
Sbjct: 72  FASPNSALDNVVLEYSISYFLMDLVHYLVFFPNDILFILHHLATLYVFFTCRYMVHHGAF 131

Query: 126 PILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVVVC 185
            +L LLV+AE++S CQN WTLAG+RR +  AAAK  E ++P F   YSV+R  L P  V 
Sbjct: 132 ALLVLLVLAEVTSLCQNVWTLAGFRRADAPAAAKLYELLSPPFYALYSVVRGILGPFFVY 191

Query: 186 KMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFR 234
           KM  FY+    ++GNLIP WAW SW+ VI  AI  S++WV +HW+ W++
Sbjct: 192 KMVVFYLSG--VAGNLIPRWAWSSWIVVIVTAILVSIVWVFHHWIDWYK 238

[Close]
BLAST of MELO3C011890 vs. TrEMBL
Match: M5XG72_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010551mg PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 3.3e-65
Identity = 128/237 (54.01%), Postives = 159/237 (67.09%), Query Frame = 1 

Query: 5   LPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTD 64
           LP FFS+FL +Y FAY V+ RNWGPKHR EASSC ISLAHG    I++  +IL S     
Sbjct: 11  LPAFFSIFLLIYLFAYFVVFRNWGPKHRPEASSCLISLAHGPTAAIMSIYSILHSRKAPT 70

Query: 65  FAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAV 124
           FA+PN   Q  +LE+SIAYF LDLLH + F P+D +FI HHLA LYVF TC Y+V  GA 
Sbjct: 71  FASPNDTLQNTILEFSIAYFFLDLLHYLLFFPSDVLFILHHLATLYVFTTCRYVVHHGAY 130

Query: 125 PILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVVVC 184
            IL LL +AE++SGCQN WTLA YRR +  AAAK  +F++P F  FYSV R  L P+ + 
Sbjct: 131 AILVLLFLAEITSGCQNVWTLASYRRADSPAAAKLYDFLSPRFYVFYSVFRGFLGPLFMF 190

Query: 185 KMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKEK 242
           K+G FY      +   IP WAW+SW+ VI +AI  S+LWV N W+ W R    +KE+
Sbjct: 191 KLGLFYASG--AAEPKIPRWAWVSWMVVILIAIGLSILWVLNLWIDWHRNKVQKKER 245

[Close]
BLAST of MELO3C011890 vs. TrEMBL
Match: A0A0D2W0W5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G174800 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.6e-62
Identity = 119/235 (50.64%), Postives = 159/235 (67.66%), Query Frame = 1 

Query: 3   LQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAIL----Q 62
           L LP FF  F+  Y  AY  +  NW PKHR EASSCFISL HGTP V LA  A+     +
Sbjct: 9   LTLPTFFFFFVSSYLLAYFRIFHNWDPKHRAEASSCFISLTHGTPAVFLAIHALTTHTTK 68

Query: 63  SPNPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYI 122
           SP+P  F++PNT     VLE+SI+YFS+DLLH + F PND +FI HHLA LYVF TC +I
Sbjct: 69  SPSPPTFSSPNTFLHNTVLEFSISYFSIDLLHYLIFFPNDTLFILHHLATLYVFFTCRFI 128

Query: 123 VGCGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGL 182
           V  G+  +L LL++AE++S CQN WTLAGYR+ ++  A K  + ++  F  FY+++R  +
Sbjct: 129 VHHGSFALLVLLILAEITSFCQNVWTLAGYRKADLPVAGKVFDLMSLPFFAFYTIVRGII 188

Query: 183 APVVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFR 234
            P+ V KMG FY+    M+G+ IP WAW+SW+ VI  AI  S++WV +HW+ WF+
Sbjct: 189 GPLFVYKMGVFYINQ--MAGDSIPVWAWVSWMIVIVTAILISIVWVFDHWIDWFK 241

[Close]
BLAST of MELO3C011890 vs. TrEMBL
Match: A0A067LCX5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10171 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.4e-62
Identity = 123/237 (51.90%), Postives = 162/237 (68.35%), Query Frame = 1 

Query: 5   LPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTD 64
           LPLFFS FLF+Y  AY V+ RNW  K R EASSC ISL HGTP V LA+ AI    N   
Sbjct: 11  LPLFFSFFLFIYLLAYFVVFRNWTSKVRSEASSCLISLCHGTPAVFLASYAIFADSN-RG 70

Query: 65  FAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAV 124
           F++PNT  Q  VL+YSIAYF +DL+H V F P+D +FI HHLA L+VF+TC Y+V  GA 
Sbjct: 71  FSSPNTIIQDAVLDYSIAYFLMDLIHYVIFYPSDVLFIGHHLATLFVFMTCRYVVSHGAY 130

Query: 125 PILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVVVC 184
            IL LL++AE++S CQN WTLAG RRT++  A+K  +F++P F  FYS++R  L P  V 
Sbjct: 131 AILWLLILAEVTSLCQNTWTLAGARRTDVKFASKVYDFLSPPFYAFYSLVRGLLGPYFVY 190

Query: 185 KMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKEK 242
           +MG FY+    ++  +IP W WISW+ V+  AI  S+LW+ N W+  +R  +++ EK
Sbjct: 191 QMGAFYISG--VADRVIPKWVWISWMIVVTTAISVSILWITNLWVELYRAKKSKCEK 244

[Close]
BLAST of MELO3C011890 vs. TAIR10
Match: AT3G25950.1 (AT3G25950.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 228.4 bits (581), Expect = 4.8e-60
Identity = 114/237 (48.10%), Postives = 153/237 (64.56%), Query Frame = 1 

Query: 6   PLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPT-- 65
           P F  +FL VYT  Y ++ R W     L AS C +SL HGTP VI+A+ A+L +P     
Sbjct: 16  PSFLLLFLAVYTIGYFLVFRTWKQSSHLGAS-CLMSLFHGTPAVIMASHALLTTPRADVH 75

Query: 66  DFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGA 125
            FA+PNT  ++ VL++S+AYF++DLLH + F PNDF+FI HH+A LYVF TC + VG GA
Sbjct: 76  SFASPNTAVESNVLDFSMAYFTVDLLHYLIFLPNDFIFILHHIATLYVFATCRFAVGHGA 135

Query: 126 VPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVVV 185
             +L LL++AE +S CQN WT+ GYR+ ++  A +  E ++P F  FY+V+R    PVV+
Sbjct: 136 HGLLLLLILAEATSACQNVWTITGYRKNDVALARRVRELLSPPFYLFYTVVRGLAGPVVL 195

Query: 186 CKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKE 241
             M  FY GS    G ++P WAW+SWL VIG AI  S+LWV  +WL WFR   + K+
Sbjct: 196 YDMATFY-GSGAADG-VVPRWAWLSWLVVIGFAILVSILWVLRNWLDWFRENNSSKK 249

[Close]
BLAST of MELO3C011890 vs. TAIR10
Match: AT5G14280.1 (AT5G14280.1 DNA-binding storekeeper protein-related)

HSP 1 Score: 224.6 bits (571), Expect = 7.0e-59
Identity = 115/244 (47.13%), Postives = 155/244 (63.52%), Query Frame = 1 

Query: 5   LPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTD 64
           LP+FFSMFL +Y  AY ++ RNW P+ R EASSC IS+ HG+P V LAT A+  S +   
Sbjct: 331 LPIFFSMFLTIYLIAYFIVFRNWKPQIRPEASSCLISIFHGSPAVFLATRAVFSS-SERS 390

Query: 65  FAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAV 124
           FA+ NT  Q  VL++S+AYF  DL H + F+PND +FI HH+A L+VF+TC ++V  GA 
Sbjct: 391 FASANTAAQNTVLDFSVAYFLTDLFHYIVFNPNDVLFIGHHVATLFVFLTCRFLVFHGAC 450

Query: 125 PILGLLVVAELSSGCQNAWTLAGYRRT--EIVAAAKFEEFVTPYFLTFYSVLRVGLAPVV 184
            ILGLL++AE++S CQNAWTLAG R+   E   A K  + ++P F  FYS++R  L P+ 
Sbjct: 451 AILGLLILAEVTSACQNAWTLAGARKNDPESRLAVKVYDLLSPPFYAFYSIVRGVLGPLF 510

Query: 185 VCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKEKV 244
             KM  FY      +  +IP W WISW  V+G+AI  S+LW+ N W+  F   +  K +V
Sbjct: 511 FGKMVAFYARG--GAHGVIPNWLWISWAIVVGIAITVSILWIWNLWIELFSERKANKIRV 570

Query: 245 SSYV 247
              +
Sbjct: 571 DKKI 571

[Close]
BLAST of MELO3C011890 vs. TAIR10
Match: AT3G27270.1 (AT3G27270.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 207.6 bits (527), Expect = 8.8e-54
Identity = 112/240 (46.67%), Postives = 146/240 (60.83%), Query Frame = 1 

Query: 5   LPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTD 64
           LPLFFS+F+FVY   Y  + + W P+ R  ASSC ISL HG   V+LAT A+L  PN   
Sbjct: 10  LPLFFSIFIFVYLLGYLFIFKKWTPETRPLASSCLISLLHGVSAVVLATNALLSDPN-RG 69

Query: 65  FAAPNTKFQALVLEYSIAYFSLDLLHCVSF-SP--NDFVFIFHHLAVLYVFVTCNYIVGC 124
           F++ NT+ Q  +L++S AYF  DL+H   F SP   D +F  HHLAVL+VF+TC Y+V  
Sbjct: 70  FSSVNTQSQNSILDFSSAYFLADLVHLAVFPSPAGGDSLFAAHHLAVLFVFLTCRYMVAH 129

Query: 125 GAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPV 184
           GA  +L LLVVAE +S CQN WTLA  R  +   A     FVT  F   YSV R  LAP+
Sbjct: 130 GACALLALLVVAEATSACQNTWTLADARGKDAPLAVSLHRFVTVPFYASYSVCRCVLAPL 189

Query: 185 VVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKEK 242
           ++ KM  FYV     + ++IP W W+SW  VI  A+  S+LW+ N W+L+F+   ++  K
Sbjct: 190 LIVKMTWFYVSG--GADDVIPRWVWVSWTVVIVTAVTVSILWIWNLWVLFFQERYSKFTK 246

[Close]
BLAST of MELO3C011890 vs. NCBI nr
Match: gi|659090562|ref|XP_008446083.1| (PREDICTED: uncharacterized protein LOC103488912 [Cucumis melo])

HSP 1 Score: 512.7 bits (1319), Expect = 3.6e-142
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 1 

Query: 1   MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP 60
           MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP
Sbjct: 1   MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP 60

Query: 61  NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG 120
           NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG
Sbjct: 61  NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG 120

Query: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP 180
           CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP
Sbjct: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP 180

Query: 181 VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKE 240
           VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKE
Sbjct: 181 VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKE 240

Query: 241 KVSSYVSH 249
           KVSSYVSH
Sbjct: 241 KVSSYVSH 248

[Close]
BLAST of MELO3C011890 vs. NCBI nr
Match: gi|449435460|ref|XP_004135513.1| (PREDICTED: uncharacterized protein LOC101219781 [Cucumis sativus])

HSP 1 Score: 465.7 bits (1197), Expect = 5.1e-128
Identity = 224/239 (93.72%), Postives = 229/239 (95.82%), Query Frame = 1 

Query: 1   MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP 60
           MDLQLPLFF+MFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILA IAILQSP
Sbjct: 1   MDLQLPLFFAMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILAAIAILQSP 60

Query: 61  NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG 120
           N TDFAAPNTKFQALVLEYSIAYFSLDLLHC+ FSPNDFVFIFHHLAVLYVFVTCNYIVG
Sbjct: 61  NSTDFAAPNTKFQALVLEYSIAYFSLDLLHCLLFSPNDFVFIFHHLAVLYVFVTCNYIVG 120

Query: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP 180
           CGAVPILGLLVVAELSSGCQNAWTLAGYRRTE+VAAAKFEEFV PYFLTFYSVLRVGLAP
Sbjct: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEMVAAAKFEEFVAPYFLTFYSVLRVGLAP 180

Query: 181 VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRK 240
           VVVCKMGEFYVGSL MSGNLIPTWAWISW+CVIG+AIFGSVLWVGNHWLLWF    N K
Sbjct: 181 VVVCKMGEFYVGSLGMSGNLIPTWAWISWMCVIGLAIFGSVLWVGNHWLLWFHRITNTK 239

[Close]
BLAST of MELO3C011890 vs. NCBI nr
Match: gi|658009886|ref|XP_008340168.1| (PREDICTED: uncharacterized protein LOC103403123 [Malus domestica])

HSP 1 Score: 267.3 bits (682), Expect = 2.7e-68
Identity = 134/237 (56.54%), Postives = 165/237 (69.62%), Query Frame = 1 

Query: 5   LPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTD 64
           LP FFS+FL +Y  AY +L RNWGPKHR EASSC ISL+HG+    +A  AIL+S   T 
Sbjct: 11  LPTFFSIFLLIYLSAYFLLFRNWGPKHRPEASSCLISLSHGSAAAAMAAHAILRSXKATT 70

Query: 65  FAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAV 124
           FA+PNT  Q  VLE+SIAYFSLDLLH + F PND +FI HHLA LYVF TC Y V  GA 
Sbjct: 71  FASPNTDTQNTVLEFSIAYFSLDLLHYLLFFPNDVIFILHHLATLYVFTTCRYAVRHGAH 130

Query: 125 PILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVVVC 184
            IL LL++AE++SGCQNAWTLAG+RR    AAAK  +F++P F  FYSV R  L PV + 
Sbjct: 131 AILVLLLLAEITSGCQNAWTLAGFRRAGSPAAAKLYDFLSPKFYAFYSVFRGILGPVFMF 190

Query: 185 KMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKEK 242
           KMG FYV     +  +IP WAW SW+ VI +AI  S+LWV N W+ W++    +K++
Sbjct: 191 KMGAFYVSG--AADPVIPRWAWASWMVVISIAICLSILWVLNLWIDWYKNKVQKKKR 245

[Close]
BLAST of MELO3C011890 vs. NCBI nr
Match: gi|657994982|ref|XP_008389809.1| (PREDICTED: uncharacterized protein LOC103452099 [Malus domestica])

HSP 1 Score: 261.2 bits (666), Expect = 1.9e-66
Identity = 130/237 (54.85%), Postives = 164/237 (69.20%), Query Frame = 1 

Query: 5   LPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTD 64
           LP FFS+FL +Y +AY +L RNWGPKHR EASSC ISL+HGT    +A  AIL+S   T 
Sbjct: 11  LPTFFSIFLLIYLYAYFLLFRNWGPKHRPEASSCLISLSHGTAAAAMAAHAILRSHKATT 70

Query: 65  FAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAV 124
           FA+PNT  Q  VLE+SIAYFSLDLLH + F PND +FI HHLA LYVF TC Y+V  GA 
Sbjct: 71  FASPNTPTQNTVLEFSIAYFSLDLLHYLLFFPNDVLFILHHLATLYVFTTCLYVVRHGAH 130

Query: 125 PILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVVVC 184
            IL LL +AE++SGCQNAWTLA +RR    AAAK  +F++P F   YSV R  L P+ + 
Sbjct: 131 AILVLLFLAEITSGCQNAWTLADFRRAGSPAAAKLYDFLSPKFYALYSVFRGILGPMFMY 190

Query: 185 KMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKEK 242
           +M  FYV     +  +IP WAW+SW+ VI +AI  S+LWV N W+ W++    +K++
Sbjct: 191 RMAVFYVSG--AADPVIPRWAWVSWMVVISVAICLSILWVLNLWIDWYKNKAQKKKR 245

[Close]
BLAST of MELO3C011890 vs. NCBI nr
Match: gi|694357518|ref|XP_009359308.1| (PREDICTED: uncharacterized protein LOC103949896 [Pyrus x bretschneideri])

HSP 1 Score: 260.0 bits (663), Expect = 4.2e-66
Identity = 133/237 (56.12%), Postives = 163/237 (68.78%), Query Frame = 1 

Query: 5   LPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTD 64
           LP FFS+FL +Y  AY +L RNWGPKHR  ASSC ISL+HG+    +A  AIL    PT 
Sbjct: 11  LPTFFSIFLLIYLSAYFLLFRNWGPKHRPGASSCLISLSHGSAAAAMAAHAIL----PTT 70

Query: 65  FAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAV 124
           FA+PNT  Q  VLE+SIAYFSLDLLH + F PND +FI HHLA LYVF TC Y V  GA 
Sbjct: 71  FASPNTATQNTVLEFSIAYFSLDLLHYLIFFPNDVLFILHHLATLYVFTTCRYTVRHGAH 130

Query: 125 PILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVVVC 184
            IL LL +AE++SGCQNAWTLAG+RR+   AAAK  +F++P F  FYSV R  L PV + 
Sbjct: 131 AILVLLFLAEITSGCQNAWTLAGFRRSGSPAAAKLYDFLSPKFYAFYSVFRGILGPVFMY 190

Query: 185 KMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRKEK 242
           KMG FYV     +  +IP WAW+SW+ VI  AI  S+LWV N W+ W++    +K++
Sbjct: 191 KMGAFYVSG--AADPVIPRWAWVSWMVVISTAICLSILWVLNLWIDWYKNKVQKKKR 241

The following BLAST results are available for this feature:
BLAST of MELO3C011890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVB7_CUCSA3.5e-12893.72Uncharacterized protein OS=Cucumis sativus GN=Csa_5G590130 PE=4 SV=1[more]
A0A061EEX7_THECC2.5e-6554.59DNA-binding storekeeper protein-related OS=Theobroma cacao GN=TCM_010762 PE=4 SV... [more]
M5XG72_PRUPE3.3e-6554.01Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010551mg PE=4 SV=1[more]
A0A0D2W0W5_GOSRA2.6e-6250.64Uncharacterized protein OS=Gossypium raimondii GN=B456_012G174800 PE=4 SV=1[more]
A0A067LCX5_JATCU4.4e-6251.90Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10171 PE=4 SV=1[more]
BLAST of MELO3C011890 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G25950.14.8e-6048.10 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein[more]
AT5G14280.17.0e-5947.13 DNA-binding storekeeper protein-related[more]
AT3G27270.18.8e-5446.67 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein[more]
BLAST of MELO3C011890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090562|ref|XP_008446083.1|3.6e-142100.00PREDICTED: uncharacterized protein LOC103488912 [Cucumis melo][more]
gi|449435460|ref|XP_004135513.1|5.1e-12893.72PREDICTED: uncharacterized protein LOC101219781 [Cucumis sativus][more]
gi|658009886|ref|XP_008340168.1|2.7e-6856.54PREDICTED: uncharacterized protein LOC103403123 [Malus domestica][more]
gi|657994982|ref|XP_008389809.1|1.9e-6654.85PREDICTED: uncharacterized protein LOC103452099 [Malus domestica][more]
gi|694357518|ref|XP_009359308.1|4.2e-6656.12PREDICTED: uncharacterized protein LOC103949896 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006634TLC-dom
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU60362melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011890T1MELO3C011890T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU60362MU60362transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 36..217
score: 1.2
IPR006634TRAM/LAG1/CLN8 homology domainSMARTSM00724lag1_27coord: 30..236
score: 5.4
NoneNo IPR availablePANTHERPTHR31766FAMILY NOT NAMEDcoord: 3..247
score: 1.1
NoneNo IPR availablePANTHERPTHR31766:SF2DNA-BINDING STOREKEEPER PROTEIN-LIKE PROTEIN-RELATEDcoord: 3..247
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C011890Csa5G590130Cucumber (Chinese Long) v2cumeB377
MELO3C011890Cla022991Watermelon (97103) v1mewmB077
MELO3C011890ClCG11G013900Watermelon (Charleston Gray)mewcgB047
MELO3C011890Cla97C11G219880Watermelon (97103) v2mewmbB051
MELO3C011890Bhi07G001506Wax gourdmewgoB072
MELO3C011890CSPI05G21640Wild cucumber (PI 183967)cpimeB369
MELO3C011890Cucsa.075480Cucumber (Gy14) v1cgymeB077
MELO3C011890CmaCh04G018170Cucurbita maxima (Rimu)cmameB641
MELO3C011890CmoCh04G019120Cucurbita moschata (Rifu)cmomeB632
MELO3C011890Lsi04G006570Bottle gourd (USVL1VR-Ls)lsimeB281
MELO3C011890Cp4.1LG01g16050Cucurbita pepo (Zucchini)cpemeB364
MELO3C011890Carg14276Silver-seed gourdcarmeB0246
MELO3C011890CsaV3_5G030510Cucumber (Chinese Long) v3cucmeB381
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C011890Silver-seed gourdcarmeB0623
MELO3C011890Silver-seed gourdcarmeB0689
MELO3C011890Cucumber (Chinese Long) v3cucmeB096
MELO3C011890Watermelon (97103) v2mewmbB072
MELO3C011890Wax gourdmewgoB063
MELO3C011890Melon (DHL92) v3.5.1memeB029
MELO3C011890Cucumber (Gy14) v1cgymeB643
MELO3C011890Cucurbita maxima (Rimu)cmameB147
MELO3C011890Cucurbita maxima (Rimu)cmameB354
MELO3C011890Cucurbita maxima (Rimu)cmameB717
MELO3C011890Cucurbita moschata (Rifu)cmomeB137
MELO3C011890Cucurbita moschata (Rifu)cmomeB347
MELO3C011890Cucurbita moschata (Rifu)cmomeB707
MELO3C011890Wild cucumber (PI 183967)cpimeB089
MELO3C011890Cucumber (Chinese Long) v2cumeB091
MELO3C011890Watermelon (Charleston Gray)mewcgB073
MELO3C011890Watermelon (97103) v1mewmB048
MELO3C011890Cucurbita pepo (Zucchini)cpemeB021
MELO3C011890Cucurbita pepo (Zucchini)cpemeB079
MELO3C011890Cucurbita pepo (Zucchini)cpemeB743
MELO3C011890Bottle gourd (USVL1VR-Ls)lsimeB462
MELO3C011890Cucumber (Gy14) v2cgybmeB077
MELO3C011890Cucumber (Gy14) v2cgybmeB319