Cla97C11G219880 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C11G219880
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	TRAM/LAG1/CLN8 homology domain
Location	Cla97Chr11 : 25926609 .. 25927328 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTTCAATTACCTTTCTTCTTCTTCATGTTTCTACTTATATATGCATTCGCTTACTTGGTTCTGCTTCGAAATTGGGGGCCAAAGCACAGGCTAGAAGCTTCAAGTTGCTTCATATCACTCGCCCATGGCAGTCCCGTCGTAATCATGGCTATAATTGCAATCCTCCAAGCTCCAAATACGACCGATTTCGCGGCTCCCAATACGAAATTCCAAACCCTAGTTCTGGAATACAGCATAGCTTATTTCTTGTTGGATCTTCTTCATTGTATATTGTTTTCACCACATGATTTCGTCTTCATATTCCATCATTTGGCAGTAATTTATGTGTTCGTTACATGTAATTACTTGGTTCATCGTGGCGCTGTGCCGATTCTAGGGCTTTTGGTGGTGGCGGAATTGAGCAGTGGGTGCCAGAATGTTTGGACCCTTGCGGGTTATAGAAGGGCTGATGTTGTAGCCGCGGCTAAGTTTCAAGACTTTGTGTCTCCGTATTTTTTCACGTTTTATAGCATTTTAAGAGTGGGCTTAGCGCCGGCTTTTTTGTATAAAATGGGAGGATTCTACGTTGGTAGTATGGGTAAGGATTTGATTCCTAAGTGGGCTTGGATTTCTTGGATGGGTGTAATTGGAATGGCTATTTTTGGTAGTATGTTGTGGGTTGGAAATCATTGGCTTCTTTGGTTTCGCTCTACAAACCATGGAAAATCCGTATAA

mRNA sequence

ATGGAGTTTCAATTACCTTTCTTCTTCTTCATGTTTCTACTTATATATGCATTCGCTTACTTGGTTCTGCTTCGAAATTGGGGGCCAAAGCACAGGCTAGAAGCTTCAAGTTGCTTCATATCACTCGCCCATGGCAGTCCCGTCGTAATCATGGCTATAATTGCAATCCTCCAAGCTCCAAATACGACCGATTTCGCGGCTCCCAATACGAAATTCCAAACCCTAGTTCTGGAATACAGCATAGCTTATTTCTTGTTGGATCTTCTTCATTGTATATTGTTTTCACCACATGATTTCGTCTTCATATTCCATCATTTGGCAGTAATTTATGTGTTCGTTACATGTAATTACTTGGTTCATCGTGGCGCTGTGCCGATTCTAGGGCTTTTGGTGGTGGCGGAATTGAGCAGTGGGTGCCAGAATGTTTGGACCCTTGCGGGTTATAGAAGGGCTGATGTTGTAGCCGCGGCTAAGTTTCAAGACTTTGTGTCTCCGTATTTTTTCACGTTTTATAGCATTTTAAGAGTGGGCTTAGCGCCGGCTTTTTTGTATAAAATGGGAGGATTCTACGTTGGTAGTATGGGTAAGGATTTGATTCCTAAGTGGGCTTGGATTTCTTGGATGGGTGTAATTGGAATGGCTATTTTTGGTAGTATGTTGTGGGTTGGAAATCATTGGCTTCTTTGGTTTCGCTCTACAAACCATGGAAAATCCGTATAA

Coding sequence (CDS)

ATGGAGTTTCAATTACCTTTCTTCTTCTTCATGTTTCTACTTATATATGCATTCGCTTACTTGGTTCTGCTTCGAAATTGGGGGCCAAAGCACAGGCTAGAAGCTTCAAGTTGCTTCATATCACTCGCCCATGGCAGTCCCGTCGTAATCATGGCTATAATTGCAATCCTCCAAGCTCCAAATACGACCGATTTCGCGGCTCCCAATACGAAATTCCAAACCCTAGTTCTGGAATACAGCATAGCTTATTTCTTGTTGGATCTTCTTCATTGTATATTGTTTTCACCACATGATTTCGTCTTCATATTCCATCATTTGGCAGTAATTTATGTGTTCGTTACATGTAATTACTTGGTTCATCGTGGCGCTGTGCCGATTCTAGGGCTTTTGGTGGTGGCGGAATTGAGCAGTGGGTGCCAGAATGTTTGGACCCTTGCGGGTTATAGAAGGGCTGATGTTGTAGCCGCGGCTAAGTTTCAAGACTTTGTGTCTCCGTATTTTTTCACGTTTTATAGCATTTTAAGAGTGGGCTTAGCGCCGGCTTTTTTGTATAAAATGGGAGGATTCTACGTTGGTAGTATGGGTAAGGATTTGATTCCTAAGTGGGCTTGGATTTCTTGGATGGGTGTAATTGGAATGGCTATTTTTGGTAGTATGTTGTGGGTTGGAAATCATTGGCTTCTTTGGTTTCGCTCTACAAACCATGGAAAATCCGTATAA

Protein sequence

MEFQLPFFFFMFLLIYAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNTTDFAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRGAVPILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPAFLYKMGGFYVGSMGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNHGKSV

Homology

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BLAST of Cla97C11G219880 vs. NCBI nr
Match: XP_004135513.1 (PREDICTED: uncharacterized protein LOC101219781 [Cucumis sativus] >KGN51696.1 hypothetical protein Csa_5G590130 [Cucumis sativus])

HSP 1 Score: 376.3 bits (965), Expect = 7.6e-101
Identity = 186/240 (77.50%), Postives = 207/240 (86.25%), Query Frame = 0


Query: 1   MEFQLPFFFXXXXXXXAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAP 60
           M+ QLP FF        FAY VLLRNWGPKHRLEASSCFISLAHG+PVVI+A IAILQ+P
Sbjct: 1   MDLQLPLFFAMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILAAIAILQSP 60

Query: 61  NTTDFAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVH 120
           N+TDFAAPNTKFQ LVLEYSIAYF LDLLHC+LFSP+DFVFIFHHLAV+YVFVTCNY+V 
Sbjct: 61  NSTDFAAPNTKFQALVLEYSIAYFSLDLLHCLLFSPNDFVFIFHHLAVLYVFVTCNYIVG 120

Query: 121 RGAVPILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAP 180
            GAVPILGLLVVAELSSGCQN WTLAGYRR ++VAAAKF++FV+PYF TFYS+LRVGLAP
Sbjct: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEMVAAAKFEEFVAPYFLTFYSVLRVGLAP 180

Query: 181 AFLYKMGGFYVGSMGK--DLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNHGKS 239
             + KMG FYVGS+G   +LIP WAWISWM VIG+AIFGS+LWVGNHWLLWF    + KS
Sbjct: 181 VVVCKMGEFYVGSLGMSGNLIPTWAWISWMCVIGLAIFGSVLWVGNHWLLWFHRITNTKS 240

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BLAST of Cla97C11G219880 vs. NCBI nr
Match: XP_008446083.1 (PREDICTED: uncharacterized protein LOC103488912 [Cucumis melo])

HSP 1 Score: 375.2 bits (962), Expect = 1.7e-100
Identity = 186/239 (77.82%), Postives = 205/239 (85.77%), Query Frame = 0


Query: 1   MEFQLPFFFXXXXXXXAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAP 60
           M+ QLP FF        FAY VLLRNWGPKHRLEASSCFISLAHG+PVVI+A IAILQ+P
Sbjct: 1   MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP 60

Query: 61  NTTDFAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVH 120
           N TDFAAPNTKFQ LVLEYSIAYF LDLLHC+ FSP+DFVFIFHHLAV+YVFVTCNY+V 
Sbjct: 61  NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG 120

Query: 121 RGAVPILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAP 180
            GAVPILGLLVVAELSSGCQN WTLAGYRR ++VAAAKF++FV+PYF TFYS+LRVGLAP
Sbjct: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP 180

Query: 181 AFLYKMGGFYVGS--MGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNHGK 238
             + KMG FYVGS  M  +LIP WAWISW+ VIGMAIFGS+LWVGNHWLLWFR T + K
Sbjct: 181 VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRK 239

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BLAST of Cla97C11G219880 vs. NCBI nr
Match: XP_022956623.1 (TLC domain-containing protein At5g14285-like [Cucurbita moschata])

HSP 1 Score: 360.5 bits (924), Expect = 4.3e-96
Identity = 178/218 (81.65%), Postives = 193/218 (88.53%), Query Frame = 0


Query: 22  VLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNTTDFAAPNTKFQTLVLEYSI 81
           V+L+NWGPKHRLEASSCFISLAHG PVVIMAIIAILQAPN  DFAA NTK+Q LVLEYS+
Sbjct: 32  VVLQNWGPKHRLEASSCFISLAHGCPVVIMAIIAILQAPNMADFAALNTKYQGLVLEYSM 91

Query: 82  AYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRGAVPILGLLVVAELSSGCQN 141
           AYFL+DLLH ILF P DFVFI HHLAV+YVF TC+YLV RGA+PIL LLV+AE SSGCQN
Sbjct: 92  AYFLMDLLHFILFYPRDFVFICHHLAVLYVFATCHYLVSRGALPILVLLVLAEFSSGCQN 151

Query: 142 VWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPAFLYKMGGFYVGSMGKDLIPK 201
           VWTLAGYRRADV AAAKFQDFVSPYFFTFYSILR G AP FL+KMG FYV S  ++LIPK
Sbjct: 152 VWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLHKMGEFYVSSAAENLIPK 211

Query: 202 WAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNHGKSV 240
           WAWISWMGVIG AIF S+LWVGNHW+LWFR T HGK+V
Sbjct: 212 WAWISWMGVIGTAIFVSILWVGNHWVLWFRRTKHGKAV 249

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BLAST of Cla97C11G219880 vs. NCBI nr
Match: XP_023554709.1 (TLC domain-containing protein At5g14285-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359.8 bits (922), Expect = 7.3e-96
Identity = 177/218 (81.19%), Postives = 193/218 (88.53%), Query Frame = 0


Query: 22  VLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNTTDFAAPNTKFQTLVLEYSI 81
           V+L+NWGPKHR+EASSCFISLAHGSPVVIMAIIAILQAPN  DFAA NTK+Q LVLEYS+
Sbjct: 31  VVLQNWGPKHRIEASSCFISLAHGSPVVIMAIIAILQAPNMADFAALNTKYQGLVLEYSM 90

Query: 82  AYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRGAVPILGLLVVAELSSGCQN 141
           AYFL+DLLH ILF P DFVFI HHLAV+YVF TC+YLV RGA+PIL LLV+AE SSGCQN
Sbjct: 91  AYFLMDLLHYILFYPRDFVFICHHLAVLYVFATCHYLVRRGALPILVLLVLAEFSSGCQN 150

Query: 142 VWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPAFLYKMGGFYVGSMGKDLIPK 201
           VWTLAGYRRADV AAAKFQDFVSPYFFTFYSILR G AP FL+KMG FYV S  ++LIPK
Sbjct: 151 VWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLHKMGEFYVSSAAENLIPK 210

Query: 202 WAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNHGKSV 240
           WAWISWMGVIG AI  S+LWVGNHW+LWFR T HGK+V
Sbjct: 211 WAWISWMGVIGTAILVSILWVGNHWVLWFRRTKHGKAV 248

[Close]

BLAST of Cla97C11G219880 vs. NCBI nr
Match: XP_022998555.1 (TLC domain-containing protein At5g14285-like [Cucurbita maxima])

HSP 1 Score: 357.1 bits (915), Expect = 4.8e-95
Identity = 176/218 (80.73%), Postives = 191/218 (87.61%), Query Frame = 0


Query: 22  VLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNTTDFAAPNTKFQTLVLEYSI 81
           V+L+NWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPN  DFAA NTK+Q LVL+YS+
Sbjct: 32  VVLQNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNMADFAALNTKYQGLVLQYSM 91

Query: 82  AYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRGAVPILGLLVVAELSSGCQN 141
           AYFL+DLLH ILF P DFVFI HHLAV+YVF TCNYLV RGA+PIL LLV+AE SSGCQN
Sbjct: 92  AYFLMDLLHFILFYPRDFVFICHHLAVLYVFATCNYLVRRGALPILVLLVLAEFSSGCQN 151

Query: 142 VWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPAFLYKMGGFYVGSMGKDLIPK 201
           VWTLAGYRRADV AAAKFQDFVSPYFFTFYSILR G AP FL+KMG FYV    ++LIPK
Sbjct: 152 VWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLHKMGEFYVSRAAENLIPK 211

Query: 202 WAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNHGKSV 240
           WAWISWMGVIG AI  S+LWVGNHW+LWFR   HGK+V
Sbjct: 212 WAWISWMGVIGTAILVSILWVGNHWVLWFRCKKHGKAV 249

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BLAST of Cla97C11G219880 vs. TrEMBL
Match: tr|A0A0A0KVB7|A0A0A0KVB7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G590130 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 5.0e-101
Identity = 186/240 (77.50%), Postives = 207/240 (86.25%), Query Frame = 0


Query: 1   MEFQLPFFFXXXXXXXAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAP 60
           M+ QLP FF        FAY VLLRNWGPKHRLEASSCFISLAHG+PVVI+A IAILQ+P
Sbjct: 1   MDLQLPLFFAMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILAAIAILQSP 60

Query: 61  NTTDFAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVH 120
           N+TDFAAPNTKFQ LVLEYSIAYF LDLLHC+LFSP+DFVFIFHHLAV+YVFVTCNY+V 
Sbjct: 61  NSTDFAAPNTKFQALVLEYSIAYFSLDLLHCLLFSPNDFVFIFHHLAVLYVFVTCNYIVG 120

Query: 121 RGAVPILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAP 180
            GAVPILGLLVVAELSSGCQN WTLAGYRR ++VAAAKF++FV+PYF TFYS+LRVGLAP
Sbjct: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEMVAAAKFEEFVAPYFLTFYSVLRVGLAP 180

Query: 181 AFLYKMGGFYVGSMGK--DLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNHGKS 239
             + KMG FYVGS+G   +LIP WAWISWM VIG+AIFGS+LWVGNHWLLWF    + KS
Sbjct: 181 VVVCKMGEFYVGSLGMSGNLIPTWAWISWMCVIGLAIFGSVLWVGNHWLLWFHRITNTKS 240

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BLAST of Cla97C11G219880 vs. TrEMBL
Match: tr|A0A1S3BDR4|A0A1S3BDR4_CUCME (uncharacterized protein LOC103488912 OS=Cucumis melo OX=3656 GN=LOC103488912 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.1e-100
Identity = 186/239 (77.82%), Postives = 205/239 (85.77%), Query Frame = 0


Query: 1   MEFQLPFFFXXXXXXXAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAP 60
           M+ QLP FF        FAY VLLRNWGPKHRLEASSCFISLAHG+PVVI+A IAILQ+P
Sbjct: 1   MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP 60

Query: 61  NTTDFAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVH 120
           N TDFAAPNTKFQ LVLEYSIAYF LDLLHC+ FSP+DFVFIFHHLAV+YVFVTCNY+V 
Sbjct: 61  NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG 120

Query: 121 RGAVPILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAP 180
            GAVPILGLLVVAELSSGCQN WTLAGYRR ++VAAAKF++FV+PYF TFYS+LRVGLAP
Sbjct: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP 180

Query: 181 AFLYKMGGFYVGS--MGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNHGK 238
             + KMG FYVGS  M  +LIP WAWISW+ VIGMAIFGS+LWVGNHWLLWFR T + K
Sbjct: 181 VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRK 239

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BLAST of Cla97C11G219880 vs. TrEMBL
Match: tr|M5XG72|M5XG72_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G233600 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.4e-65
Identity = 130/228 (57.02%), Postives = 157/228 (68.86%), Query Frame = 0


Query: 5   LPFFFXXXXXXXAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNTTD 64
           LP FF        FAY V+ RNWGPKHR EASSC ISLAHG    IM+I +IL +     
Sbjct: 11  LPAFFSIFLLIYLFAYFVVFRNWGPKHRPEASSCLISLAHGPTAAIMSIYSILHSRKAPT 70

Query: 65  FAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRGAV 124
           FA+PN   Q  +LE+SIAYF LDLLH +LF P D +FI HHLA +YVF TC Y+VH GA 
Sbjct: 71  FASPNDTLQNTILEFSIAYFFLDLLHYLLFFPSDVLFILHHLATLYVFTTCRYVVHHGAY 130

Query: 125 PILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPAFLY 184
            IL LL +AE++SGCQNVWTLA YRRAD  AAAK  DF+SP F+ FYS+ R  L P F++
Sbjct: 131 AILVLLFLAEITSGCQNVWTLASYRRADSPAAAKLYDFLSPRFYVFYSVFRGFLGPLFMF 190

Query: 185 KMGGFYVGSMGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRS 233
           K+G FY     +  IP+WAW+SWM VI +AI  S+LWV N W+ W R+
Sbjct: 191 KLGLFYASGAAEPKIPRWAWVSWMVVILIAIGLSILWVLNLWIDWHRN 238

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BLAST of Cla97C11G219880 vs. TrEMBL
Match: tr|A0A2P5EB64|A0A2P5EB64_9ROSA (TRAM/LAG1/CLN8 domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_213610 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 7.6e-65
Identity = 127/228 (55.70%), Postives = 164/228 (71.93%), Query Frame = 0


Query: 5   LPFFFXXXXXXXAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAP-NTT 64
           L  FF        FAY V+ RNWGPKH  EASSC ISLAHG+P  ++AI A+ ++    +
Sbjct: 13  LSTFFSMFLLIYLFAYFVVFRNWGPKHIAEASSCLISLAHGTPAFLLAINALTKSQLPLS 72

Query: 65  DFAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRGA 124
            FA+PNT  Q +VL+YSIAYFL+DLLH ++F P D +FIFHHLA +YVFVTC ++VH GA
Sbjct: 73  SFASPNTNSQNIVLDYSIAYFLIDLLHYVVFFPSDVLFIFHHLATLYVFVTCRFVVHHGA 132

Query: 125 VPILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPAFL 184
             +L LLV+AE++S CQNVWTLA +R+AD  AA+K  +++SP F+ FYS+ R  L P F+
Sbjct: 133 SALLVLLVLAEITSLCQNVWTLASFRKADTPAASKLYEYLSPRFYAFYSVFRGFLGPLFV 192

Query: 185 YKMGGFYVGSMGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFR 232
            KMG F++      LIP+WAWISWM VI  AIF S++WV NHW+ WFR
Sbjct: 193 LKMGIFFISGAADTLIPRWAWISWMVVITTAIFVSIVWVLNHWIEWFR 240

[Close]

BLAST of Cla97C11G219880 vs. TrEMBL
Match: tr|A0A061EEX7|A0A061EEX7_THECC (DNA-binding storekeeper protein-related OS=Theobroma cacao OX=3641 GN=TCM_010762 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 4.9e-64
Identity = 129/239 (53.97%), Postives = 170/239 (71.13%), Query Frame = 0


Query: 6   PFFFXXXXXXXAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAIL---QAPNT 65
           P FF        FAY ++ RNWGPKHR EASSCFISLAHG+P V MA  A++   Q+P T
Sbjct: 12  PTFFLLFLSIYLFAYFLVFRNWGPKHRPEASSCFISLAHGTPAVFMAAHALINTTQSPPT 71

Query: 66  TDFAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRG 125
             FA+PN+    +VLEYSI+YFL+DL+H ++F P+D +FI HHLA +YVF TC Y+VH G
Sbjct: 72  --FASPNSALDNVVLEYSISYFLMDLVHYLVFFPNDILFILHHLATLYVFFTCRYMVHHG 131

Query: 126 AVPILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPAF 185
           A  +L LLV+AE++S CQNVWTLAG+RRAD  AAAK  + +SP F+  YS++R  L P F
Sbjct: 132 AFALLVLLVLAEVTSLCQNVWTLAGFRRADAPAAAKLYELLSPPFYALYSVVRGILGPFF 191

Query: 186 LYKMGGFYVGSMGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNH--GKSV 240
           +YKM  FY+  +  +LIP+WAW SW+ VI  AI  S++WV +HW+ W++  N+  GK V
Sbjct: 192 VYKMVVFYLSGVAGNLIPRWAWSSWIVVIVTAILVSIVWVFHHWIDWYKGRNYKAGKKV 248

[Close]

BLAST of Cla97C11G219880 vs. Swiss-Prot
Match: sp|Q8GYK7|Y5285_ARATH (TLC domain-containing protein At5g14285 OS=Arabidopsis thaliana OX=3702 GN=At5g14285 PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 6.9e-53
Identity = 111/235 (47.23%), Postives = 147/235 (62.55%), Query Frame = 0


Query: 5   LPFFFXXXXXXXAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNTTD 64
           LP FF         AY ++ RNW P+ R EASSC IS+ HGSP V +A  A+  + +   
Sbjct: 13  LPIFFSMFLTIYLIAYFIVFRNWKPQIRPEASSCLISIFHGSPAVFLATRAVFSS-SERS 72

Query: 65  FAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRGAV 124
           FA+ NT  Q  VL++S+AYFL DL H I+F+P+D +FI HH+A ++VF+TC +LV  GA 
Sbjct: 73  FASANTAAQNTVLDFSVAYFLTDLFHYIVFNPNDVLFIGHHVATLFVFLTCRFLVFHGAC 132

Query: 125 PILGLLVVAELSSGCQNVWTLAGYRRADVVA--AAKFQDFVSPYFFTFYSILRVGLAPAF 184
            ILGLL++AE++S CQN WTLAG R+ D  +  A K  D +SP F+ FYSI+R  L P F
Sbjct: 133 AILGLLILAEVTSACQNAWTLAGARKNDPESRLAVKVYDLLSPPFYAFYSIVRGVLGPLF 192

Query: 185 LYKMGGFYVGSMGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNHGK 238
             KM  FY       +IP W WISW  V+G+AI  S+LW+ N W+  F      K
Sbjct: 193 FGKMVAFYARGGAHGVIPNWLWISWAIVVGIAITVSILWIWNLWIELFSERKANK 246

[Close]

BLAST of Cla97C11G219880 vs. TAIR10
Match: AT5G14280.1 (DNA-binding storekeeper protein-related)

HSP 1 Score: 208.8 bits (530), Expect = 3.8e-54
Identity = 111/235 (47.23%), Postives = 147/235 (62.55%), Query Frame = 0


Query: 5   LPFFFXXXXXXXAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNTTD 64
           LP FF         AY ++ RNW P+ R EASSC IS+ HGSP V +A  A+  + +   
Sbjct: 331 LPIFFSMFLTIYLIAYFIVFRNWKPQIRPEASSCLISIFHGSPAVFLATRAVFSS-SERS 390

Query: 65  FAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRGAV 124
           FA+ NT  Q  VL++S+AYFL DL H I+F+P+D +FI HH+A ++VF+TC +LV  GA 
Sbjct: 391 FASANTAAQNTVLDFSVAYFLTDLFHYIVFNPNDVLFIGHHVATLFVFLTCRFLVFHGAC 450

Query: 125 PILGLLVVAELSSGCQNVWTLAGYRRADVVA--AAKFQDFVSPYFFTFYSILRVGLAPAF 184
            ILGLL++AE++S CQN WTLAG R+ D  +  A K  D +SP F+ FYSI+R  L P F
Sbjct: 451 AILGLLILAEVTSACQNAWTLAGARKNDPESRLAVKVYDLLSPPFYAFYSIVRGVLGPLF 510

Query: 185 LYKMGGFYVGSMGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNHGK 238
             KM  FY       +IP W WISW  V+G+AI  S+LW+ N W+  F      K
Sbjct: 511 FGKMVAFYARGGAHGVIPNWLWISWAIVVGIAITVSILWIWNLWIELFSERKANK 564

[Close]

BLAST of Cla97C11G219880 vs. TAIR10
Match: AT3G25950.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 208.4 bits (529), Expect = 5.0e-54
Identity = 105/234 (44.87%), Postives = 146/234 (62.39%), Query Frame = 0


Query: 6   PFFFXXXXXXXAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAP--NTT 65
           P F           Y ++ R W     L A SC +SL HG+P VIMA  A+L  P  +  
Sbjct: 16  PSFLLLFLAVYTIGYFLVFRTWKQSSHLGA-SCLMSLFHGTPAVIMASHALLTTPRADVH 75

Query: 66  DFAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRGA 125
            FA+PNT  ++ VL++S+AYF +DLLH ++F P+DF+FI HH+A +YVF TC + V  GA
Sbjct: 76  SFASPNTAVESNVLDFSMAYFTVDLLHYLIFLPNDFIFILHHIATLYVFATCRFAVGHGA 135

Query: 126 VPILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPAFL 185
             +L LL++AE +S CQNVWT+ GYR+ DV  A + ++ +SP F+ FY+++R    P  L
Sbjct: 136 HGLLLLLILAEATSACQNVWTITGYRKNDVALARRVRELLSPPFYLFYTVVRGLAGPVVL 195

Query: 186 YKMGGFYVGSMGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNHGK 238
           Y M  FY       ++P+WAW+SW+ VIG AI  S+LWV  +WL WFR  N  K
Sbjct: 196 YDMATFYGSGAADGVVPRWAWLSWLVVIGFAILVSILWVLRNWLDWFRENNSSK 248

[Close]

BLAST of Cla97C11G219880 vs. TAIR10
Match: AT3G27270.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 168.7 bits (426), Expect = 4.4e-42
Identity = 96/210 (45.71%), Postives = 124/210 (59.05%), Query Frame = 0


Query: 5   LPFFFXXXXXXXAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNTTD 64
           LP FF          YL + + W P+ R  ASSC ISL HG   V++A  A+L  PN   
Sbjct: 10  LPLFFSIFIFVYLLGYLFIFKKWTPETRPLASSCLISLLHGVSAVVLATNALLSDPN-RG 69

Query: 65  FAAPNTKFQTLVLEYSIAYFLLDLLHCILF-SP--HDFVFIFHHLAVIYVFVTCNYLVHR 124
           F++ NT+ Q  +L++S AYFL DL+H  +F SP   D +F  HHLAV++VF+TC Y+V  
Sbjct: 70  FSSVNTQSQNSILDFSSAYFLADLVHLAVFPSPAGGDSLFAAHHLAVLFVFLTCRYMVAH 129

Query: 125 GAVPILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPA 184
           GA  +L LLVVAE +S CQN WTLA  R  D   A     FV+  F+  YS+ R  LAP 
Sbjct: 130 GACALLALLVVAEATSACQNTWTLADARGKDAPLAVSLHRFVTVPFYASYSVCRCVLAPL 189

Query: 185 FLYKMGGFYVGSMGKDLIPKWAWISWMGVI 212
            + KM  FYV     D+IP+W W+SW  VI
Sbjct: 190 LIVKMTWFYVSGGADDVIPRWVWVSWTVVI 218

The following BLAST results are available for this feature:

BLAST of Cla97C11G219880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135513.1	7.6e-101	77.50	PREDICTED: uncharacterized protein LOC101219781 [Cucumis sativus] >KGN51696.1 hy...	[more]
XP_008446083.1	1.7e-100	77.82	PREDICTED: uncharacterized protein LOC103488912 [Cucumis melo]	[more]
XP_022956623.1	4.3e-96	81.65	TLC domain-containing protein At5g14285-like [Cucurbita moschata]	[more]
XP_023554709.1	7.3e-96	81.19	TLC domain-containing protein At5g14285-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998555.1	4.8e-95	80.73	TLC domain-containing protein At5g14285-like [Cucurbita maxima]	[more]

BLAST of Cla97C11G219880 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KVB7\|A0A0A0KVB7_CUCSA	5.0e-101	77.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G590130 PE=4 SV=1	[more]
tr\|A0A1S3BDR4\|A0A1S3BDR4_CUCME	1.1e-100	77.82	uncharacterized protein LOC103488912 OS=Cucumis melo OX=3656 GN=LOC103488912 PE=...	[more]
tr\|M5XG72\|M5XG72_PRUPE	3.4e-65	57.02	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G233600 PE=4 SV=1	[more]
tr\|A0A2P5EB64\|A0A2P5EB64_9ROSA	7.6e-65	55.70	TRAM/LAG1/CLN8 domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33...	[more]
tr\|A0A061EEX7\|A0A061EEX7_THECC	4.9e-64	53.97	DNA-binding storekeeper protein-related OS=Theobroma cacao OX=3641 GN=TCM_010762...	[more]

BLAST of Cla97C11G219880 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GYK7\|Y5285_ARATH	6.9e-53	47.23	TLC domain-containing protein At5g14285 OS=Arabidopsis thaliana OX=3702 GN=At5g1...	[more]

BLAST of Cla97C11G219880 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G14280.1	3.8e-54	47.23	DNA-binding storekeeper protein-related	[more]
AT3G25950.1	5.0e-54	44.87	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT3G27270.1	4.4e-42	45.71	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR006634	TLC-dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C11G219880.1	Cla97C11G219880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	SMART	SM00724	lag1_27	coord: 30..234 e-value: 1.9E-18 score: 77.3
IPR006634	TRAM/LAG1/CLN8 homology domain	PROSITE	PS50922	TLC	coord: 30..220 score: 8.645
None	No IPR available	PANTHER	PTHR31766	FAMILY NOT NAMED	coord: 3..235

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C11G219880	Cla022991	Watermelon (97103) v1	wmwmbB358
Cla97C11G219880	Csa5G590130	Cucumber (Chinese Long) v2	cuwmbB357
Cla97C11G219880	MELO3C011890	Melon (DHL92) v3.5.1	mewmbB051
Cla97C11G219880	ClCG11G013900	Watermelon (Charleston Gray)	wcgwmbB064
Cla97C11G219880	CSPI05G21640	Wild cucumber (PI 183967)	cpiwmbB373
Cla97C11G219880	Cucsa.075480	Cucumber (Gy14) v1	cgywmbB072
Cla97C11G219880	CmaCh04G018170	Cucurbita maxima (Rimu)	cmawmbB735
Cla97C11G219880	CmoCh04G019120	Cucurbita moschata (Rifu)	cmowmbB707
Cla97C11G219880	Lsi04G006570	Bottle gourd (USVL1VR-Ls)	lsiwmbB271
Cla97C11G219880	MELO3C011890.2	Melon (DHL92) v3.6.1	medwmbB047
Cla97C11G219880	Carg14276	Silver-seed gourd	carwmbB0245
Cla97C11G219880	CsaV3_5G030510	Cucumber (Chinese Long) v3	cucwmbB373
Cla97C11G219880	Bhi07G001506	Wax gourd	wgowmbB522

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None